View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5761_low_26 (Length: 319)
Name: NF5761_low_26
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5761_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 45425428 - 45425719
Alignment:
| Q |
18 |
catttgagttcaaacagatgaccatacaactcaacgaggccattgagaactcgaatgcatcttcaccagcttgtcaagagatgaagcacaaactcaacaa |
117 |
Q |
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| T |
45425428 |
catttgagttcaaacagatgaccatacaactcaacgaggccattgagaactcgaatgcatcttcaccagcttgtcaagagatgaagcacaaactcaacaa |
45425527 |
T |
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| Q |
118 |
ggccattcgtagctctagtgcctcctcaccagcttatgttttccacctaaattcccctttttatcgacatcagttgaaccgtatctatnnnnnnngtaat |
217 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
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| T |
45425528 |
ggccgttcgtagctctagtgcctcctcaccagcttatgttttccacctaaattcccctttttatcgacatcagttgaaccgaatctataaaaaaagtaat |
45425627 |
T |
|
| Q |
218 |
aagaaaccaagaagaatttcatgtccacaagttgcagacaaacaagcatgtggaaatggaacaagagaaaaaggttttgtcactcgcctatg |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45425628 |
aagaaaccaagaagaatttcatgtccacaagttgcagacaaacaagcatgtggaaatggaacaagagaaaaaggttttgtcactcgcctatg |
45425719 |
T |
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