View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5761_low_32 (Length: 295)

Name: NF5761_low_32
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5761_low_32
NF5761_low_32
[»] scaffold0403 (1 HSPs)
scaffold0403 (100-260)||(4086-4248)
[»] chr8 (31 HSPs)
chr8 (100-260)||(20535451-20535613)
chr8 (123-279)||(31970567-31970722)
chr8 (100-260)||(18879943-18880104)
chr8 (123-260)||(17140180-17140316)
chr8 (123-279)||(5866954-5867108)
chr8 (100-234)||(21248622-21248756)
chr8 (174-263)||(18819140-18819229)
chr8 (100-234)||(21254448-21254594)
chr8 (174-260)||(21919668-21919753)
chr8 (123-263)||(40398106-40398257)
chr8 (216-279)||(7372132-7372195)
chr8 (213-278)||(23777555-23777620)
chr8 (80-176)||(23777667-23777763)
chr8 (99-263)||(22625950-22626124)
chr8 (173-263)||(21672931-21673020)
chr8 (123-236)||(16410995-16411112)
chr8 (186-258)||(23647943-23648016)
chr8 (214-260)||(28645145-28645191)
chr8 (214-260)||(28649729-28649775)
chr8 (123-171)||(25485152-25485200)
chr8 (123-236)||(15603707-15603822)
chr8 (100-151)||(21396806-21396859)
chr8 (100-151)||(21791299-21791352)
chr8 (167-253)||(22011378-22011465)
chr8 (188-253)||(20493554-20493619)
chr8 (167-236)||(22819539-22819610)
chr8 (219-260)||(22874419-22874460)
chr8 (130-171)||(41597382-41597423)
chr8 (130-171)||(45291609-45291650)
chr8 (136-176)||(22874323-22874363)
chr8 (187-260)||(45131712-45131788)
[»] chr3 (34 HSPs)
chr3 (100-260)||(12398444-12398606)
chr3 (100-260)||(13441573-13441735)
chr3 (100-260)||(20700039-20700198)
chr3 (123-260)||(17498600-17498747)
chr3 (132-260)||(17487127-17487265)
chr3 (99-260)||(14972102-14972277)
chr3 (123-236)||(25477133-25477245)
chr3 (95-265)||(23078088-23078259)
chr3 (123-260)||(15458499-15458647)
chr3 (167-260)||(13211054-13211147)
chr3 (177-260)||(11425438-11425523)
chr3 (174-260)||(23083844-23083930)
chr3 (174-263)||(26682657-26682746)
chr3 (100-240)||(30027791-30027942)
chr3 (216-279)||(43840285-43840348)
chr3 (167-236)||(12502812-12502883)
chr3 (123-253)||(26197139-26197271)
chr3 (100-176)||(30025308-30025384)
chr3 (100-240)||(30029060-30029211)
chr3 (214-260)||(40214447-40214493)
chr3 (100-171)||(44493966-44494039)
chr3 (100-176)||(30024040-30024116)
chr3 (123-171)||(50242086-50242134)
chr3 (213-260)||(9512281-9512327)
chr3 (213-260)||(9520256-9520302)
chr3 (213-260)||(12936358-12936404)
chr3 (197-236)||(1466685-1466726)
chr3 (130-171)||(8898284-8898325)
chr3 (174-260)||(16096659-16096746)
chr3 (130-171)||(17736468-17736509)
chr3 (130-171)||(19037737-19037778)
chr3 (130-171)||(22148706-22148747)
chr3 (100-150)||(26682572-26682624)
chr3 (212-260)||(49390873-49390920)
[»] chr1 (25 HSPs)
chr1 (100-260)||(22359434-22359596)
chr1 (123-215)||(22368018-22368110)
chr1 (175-279)||(21302242-21302346)
chr1 (167-260)||(27240509-27240604)
chr1 (99-236)||(22531497-22531636)
chr1 (123-214)||(22356173-22356262)
chr1 (123-214)||(22357859-22357948)
chr1 (177-260)||(34509088-34509173)
chr1 (177-258)||(20134494-20134576)
chr1 (213-259)||(22444719-22444765)
chr1 (213-259)||(22449953-22449999)
chr1 (177-265)||(27251447-27251536)
chr1 (175-232)||(21788824-21788882)
chr1 (100-171)||(34982968-34983041)
chr1 (123-253)||(3473654-3473786)
chr1 (123-236)||(17679315-17679432)
chr1 (174-260)||(33680289-33680376)
chr1 (123-171)||(34975857-34975905)
chr1 (188-236)||(35982977-35983027)
chr1 (125-176)||(50211036-50211086)
chr1 (188-253)||(16369049-16369114)
chr1 (188-253)||(50685936-50686001)
chr1 (214-260)||(52928714-52928759)
chr1 (130-171)||(21704306-21704347)
chr1 (99-173)||(34508997-34509072)
[»] scaffold0003 (2 HSPs)
scaffold0003 (123-260)||(411831-411968)
scaffold0003 (214-260)||(340678-340724)
[»] chr2 (31 HSPs)
chr2 (100-255)||(21901175-21901332)
chr2 (77-279)||(22732129-22732342)
chr2 (167-279)||(38812-38926)
chr2 (123-236)||(23059768-23059880)
chr2 (124-224)||(23066300-23066399)
chr2 (124-224)||(23075750-23075849)
chr2 (77-279)||(22738839-22739052)
chr2 (100-265)||(23655104-23655280)
chr2 (99-263)||(24085762-24085939)
chr2 (100-258)||(23072675-23072842)
chr2 (123-236)||(21328330-21328445)
chr2 (100-265)||(23040900-23041062)
chr2 (213-278)||(22799848-22799912)
chr2 (177-236)||(23285745-23285805)
chr2 (216-279)||(8946009-8946072)
chr2 (123-236)||(21319399-21319514)
chr2 (100-265)||(27345114-27345290)
chr2 (174-260)||(28405290-28405378)
chr2 (123-253)||(25964448-25964580)
chr2 (175-232)||(24672846-24672904)
chr2 (130-171)||(29594155-29594196)
chr2 (123-235)||(37523965-37524079)
chr2 (188-260)||(24689050-24689123)
chr2 (167-252)||(19692315-19692400)
chr2 (188-253)||(24316653-24316718)
chr2 (175-232)||(24679471-24679529)
chr2 (167-253)||(24703895-24703982)
chr2 (177-240)||(23104125-23104189)
chr2 (177-236)||(23110703-23110763)
chr2 (167-236)||(24717251-24717322)
chr2 (130-171)||(43136529-43136570)
[»] scaffold0266 (1 HSPs)
scaffold0266 (123-279)||(22116-22270)
[»] chr7 (28 HSPs)
chr7 (100-260)||(12698068-12698230)
chr7 (123-260)||(16403149-16403285)
chr7 (123-279)||(28506033-28506189)
chr7 (100-257)||(9508433-9508594)
chr7 (100-260)||(11996744-11996903)
chr7 (125-260)||(40442720-40442864)
chr7 (101-260)||(15755678-15755839)
chr7 (100-265)||(10588275-10588439)
chr7 (123-253)||(3271135-3271265)
chr7 (123-253)||(2759404-2759537)
chr7 (99-255)||(15164349-15164515)
chr7 (174-260)||(67042-67128)
chr7 (188-260)||(2283009-2283082)
chr7 (214-260)||(3565005-3565051)
chr7 (100-171)||(5294872-5294945)
chr7 (100-171)||(5296045-5296118)
chr7 (100-171)||(5297218-5297291)
chr7 (99-160)||(17736786-17736846)
chr7 (128-176)||(9643677-9643725)
chr7 (123-171)||(38226691-38226739)
chr7 (188-253)||(1868707-1868772)
chr7 (188-253)||(14044060-14044125)
chr7 (188-253)||(14354090-14354155)
chr7 (188-253)||(20220902-20220967)
chr7 (130-171)||(26211249-26211290)
chr7 (130-171)||(29329791-29329832)
chr7 (177-236)||(34200099-34200160)
chr7 (123-171)||(12429963-12430011)
[»] scaffold0088 (2 HSPs)
scaffold0088 (100-260)||(2167-2328)
scaffold0088 (100-260)||(9551-9712)
[»] scaffold0305 (1 HSPs)
scaffold0305 (123-260)||(19946-20082)
[»] scaffold0016 (2 HSPs)
scaffold0016 (175-279)||(1174-1278)
scaffold0016 (203-240)||(1064-1101)
[»] chr5 (39 HSPs)
chr5 (175-279)||(23391190-23391294)
chr5 (177-279)||(19661538-19661641)
chr5 (123-258)||(25418750-25418896)
chr5 (77-176)||(8287652-8287751)
chr5 (80-278)||(21275591-21275799)
chr5 (177-277)||(21293670-21293772)
chr5 (124-258)||(25430646-25430791)
chr5 (84-176)||(21872445-21872537)
chr5 (84-176)||(21876725-21876817)
chr5 (80-176)||(21886475-21886571)
chr5 (213-274)||(21886619-21886680)
chr5 (216-279)||(13024672-13024735)
chr5 (216-279)||(13094856-13094919)
chr5 (174-260)||(21998261-21998348)
chr5 (213-274)||(21872584-21872645)
chr5 (213-274)||(21876864-21876925)
chr5 (188-260)||(21330256-21330329)
chr5 (174-260)||(21564834-21564920)
chr5 (188-236)||(21742786-21742836)
chr5 (130-176)||(21330363-21330409)
chr5 (203-240)||(23391367-23391404)
chr5 (130-171)||(41096467-41096508)
chr5 (123-253)||(20766247-20766380)
chr5 (100-142)||(21910296-21910339)
chr5 (188-236)||(29916348-29916398)
chr5 (214-260)||(1095821-1095867)
chr5 (123-236)||(1859713-1859830)
chr5 (130-171)||(10776546-10776587)
chr5 (130-171)||(14047326-14047367)
chr5 (167-236)||(17409812-17409883)
chr5 (130-171)||(21503029-21503069)
chr5 (130-171)||(21731094-21731135)
chr5 (130-171)||(21809214-21809255)
chr5 (188-236)||(22241099-22241148)
chr5 (188-236)||(22242095-22242144)
chr5 (188-236)||(22243091-22243140)
chr5 (100-150)||(24492786-24492838)
chr5 (134-235)||(23439258-23439363)
chr5 (134-235)||(23450625-23450730)
[»] chr4 (25 HSPs)
chr4 (100-260)||(44052075-44052236)
chr4 (100-265)||(12901999-12902162)
chr4 (77-176)||(22631738-22631837)
chr4 (77-176)||(22632656-22632755)
chr4 (123-215)||(52873977-52874079)
chr4 (175-279)||(16596500-16596606)
chr4 (174-260)||(15614402-15614489)
chr4 (218-279)||(22635800-22635861)
chr4 (101-236)||(15090543-15090690)
chr4 (174-260)||(12773383-12773468)
chr4 (174-273)||(16240669-16240769)
chr4 (100-171)||(12610149-12610222)
chr4 (100-171)||(15704635-15704708)
chr4 (214-259)||(14038037-14038082)
chr4 (216-273)||(16270902-16270959)
chr4 (123-236)||(5339704-5339820)
chr4 (128-176)||(13593521-13593569)
chr4 (123-171)||(51464715-51464763)
chr4 (174-260)||(7798079-7798165)
chr4 (188-236)||(15095828-15095878)
chr4 (188-236)||(15189138-15189188)
chr4 (188-260)||(16375555-16375628)
chr4 (188-236)||(11480655-11480704)
chr4 (128-176)||(15189067-15189114)
chr4 (213-241)||(22631885-22631913)
[»] scaffold0647 (1 HSPs)
scaffold0647 (100-260)||(6794-6955)
[»] scaffold0021 (1 HSPs)
scaffold0021 (175-279)||(121131-121235)
[»] scaffold0001 (1 HSPs)
scaffold0001 (100-253)||(198041-198197)
[»] scaffold0423 (1 HSPs)
scaffold0423 (100-259)||(479-639)
[»] chr6 (35 HSPs)
chr6 (167-279)||(19398912-19399025)
chr6 (123-236)||(17288552-17288663)
chr6 (141-236)||(28497221-28497317)
chr6 (141-236)||(29809632-29809728)
chr6 (99-260)||(20593027-20593204)
chr6 (77-176)||(25630171-25630270)
chr6 (101-260)||(1560536-1560697)
chr6 (123-234)||(25722014-25722125)
chr6 (123-214)||(25690341-25690430)
chr6 (123-214)||(25697134-25697223)
chr6 (187-278)||(35244911-35245004)
chr6 (99-252)||(20075909-20076077)
chr6 (77-176)||(20639099-20639198)
chr6 (213-279)||(22780932-22780998)
chr6 (77-176)||(22781046-22781145)
chr6 (77-200)||(21831199-21831323)
chr6 (99-200)||(21765943-21766046)
chr6 (167-236)||(22409020-22409092)
chr6 (100-239)||(25607224-25607374)
chr6 (160-214)||(25687829-25687883)
chr6 (102-239)||(25604133-25604281)
chr6 (102-239)||(25612471-25612619)
chr6 (123-236)||(18179766-18179883)
chr6 (174-258)||(4739242-4739326)
chr6 (167-239)||(31165576-31165650)
chr6 (214-260)||(18403913-18403959)
chr6 (213-259)||(19651537-19651582)
chr6 (188-253)||(19954295-19954360)
chr6 (130-171)||(4644673-4644714)
chr6 (130-171)||(8230428-8230469)
chr6 (130-171)||(16015869-16015910)
chr6 (130-171)||(16493593-16493634)
chr6 (177-236)||(16921365-16921425)
chr6 (130-171)||(23535302-23535343)
chr6 (189-236)||(1642936-1642984)
[»] scaffold0042 (2 HSPs)
scaffold0042 (100-260)||(24814-24974)
scaffold0042 (130-171)||(23267-23308)
[»] scaffold0427 (1 HSPs)
scaffold0427 (123-279)||(12766-12922)
[»] scaffold0175 (1 HSPs)
scaffold0175 (100-265)||(33358-33525)
[»] scaffold0825 (1 HSPs)
scaffold0825 (100-260)||(359-520)
[»] scaffold0161 (1 HSPs)
scaffold0161 (167-260)||(3114-3209)
[»] scaffold0358 (2 HSPs)
scaffold0358 (177-260)||(10332-10416)
scaffold0358 (177-279)||(4033-4136)
[»] scaffold0292 (2 HSPs)
scaffold0292 (77-279)||(2683-2896)
scaffold0292 (77-279)||(9720-9933)
[»] scaffold0114 (2 HSPs)
scaffold0114 (100-262)||(26346-26506)
scaffold0114 (100-262)||(16186-16357)
[»] scaffold0046 (1 HSPs)
scaffold0046 (77-176)||(27683-27782)
[»] scaffold0122 (2 HSPs)
scaffold0122 (100-260)||(39429-39604)
scaffold0122 (99-173)||(22457-22532)
[»] scaffold0071 (1 HSPs)
scaffold0071 (123-260)||(3544-3692)
[»] scaffold0456 (1 HSPs)
scaffold0456 (177-279)||(11117-11220)
[»] scaffold0146 (2 HSPs)
scaffold0146 (177-279)||(29531-29634)
scaffold0146 (199-279)||(31873-31954)
[»] scaffold0031 (1 HSPs)
scaffold0031 (174-273)||(128060-128160)
[»] scaffold0113 (1 HSPs)
scaffold0113 (187-279)||(31403-31497)
[»] scaffold0080 (2 HSPs)
scaffold0080 (125-260)||(39205-39339)
scaffold0080 (167-236)||(17205-17276)
[»] scaffold1172 (1 HSPs)
scaffold1172 (177-265)||(2149-2237)
[»] scaffold0193 (1 HSPs)
scaffold0193 (100-236)||(12459-12596)
[»] scaffold0094 (1 HSPs)
scaffold0094 (123-260)||(537-670)
[»] scaffold1098 (1 HSPs)
scaffold1098 (100-239)||(2349-2501)
[»] scaffold0639 (1 HSPs)
scaffold0639 (99-260)||(7706-7878)
[»] scaffold0026 (1 HSPs)
scaffold0026 (100-239)||(25165-25317)
[»] scaffold1655 (1 HSPs)
scaffold1655 (100-234)||(617-763)
[»] scaffold0750 (1 HSPs)
scaffold0750 (136-226)||(3137-3238)
[»] scaffold0124 (1 HSPs)
scaffold0124 (136-226)||(26844-26945)
[»] scaffold0064 (1 HSPs)
scaffold0064 (177-277)||(46321-46422)
[»] scaffold0070 (1 HSPs)
scaffold0070 (174-236)||(3824-3887)
[»] scaffold0239 (1 HSPs)
scaffold0239 (174-279)||(26337-26443)
[»] scaffold0120 (5 HSPs)
scaffold0120 (99-260)||(12535-12712)
scaffold0120 (174-279)||(15466-15572)
scaffold0120 (100-260)||(18063-18220)
scaffold0120 (174-260)||(33691-33776)
scaffold0120 (174-260)||(45229-45314)
[»] scaffold0848 (1 HSPs)
scaffold0848 (123-260)||(3869-4003)
[»] scaffold0309 (1 HSPs)
scaffold0309 (177-279)||(13209-13312)
[»] scaffold0102 (1 HSPs)
scaffold0102 (174-260)||(18554-18640)
[»] scaffold0008 (2 HSPs)
scaffold0008 (123-253)||(34570-34703)
scaffold0008 (174-260)||(15450-15536)
[»] scaffold1108 (1 HSPs)
scaffold1108 (123-236)||(2629-2746)
[»] scaffold0327 (1 HSPs)
scaffold0327 (101-254)||(4067-4231)
[»] scaffold0011 (1 HSPs)
scaffold0011 (123-265)||(168695-168847)
[»] scaffold0490 (1 HSPs)
scaffold0490 (199-279)||(1297-1378)
[»] scaffold0207 (1 HSPs)
scaffold0207 (176-260)||(3385-3469)
[»] scaffold0411 (1 HSPs)
scaffold0411 (100-146)||(9711-9758)
[»] scaffold0434 (1 HSPs)
scaffold0434 (167-253)||(98-185)
[»] scaffold0346 (1 HSPs)
scaffold0346 (100-200)||(14366-14469)
[»] scaffold0012 (3 HSPs)
scaffold0012 (177-265)||(225899-225988)
scaffold0012 (167-236)||(32287-32358)
scaffold0012 (174-257)||(5425-5509)
[»] scaffold0090 (1 HSPs)
scaffold0090 (177-265)||(29830-29918)
[»] scaffold0964 (1 HSPs)
scaffold0964 (99-259)||(3457-3626)
[»] scaffold0174 (2 HSPs)
scaffold0174 (177-265)||(12410-12500)
scaffold0174 (130-171)||(24943-24984)
[»] scaffold0395 (2 HSPs)
scaffold0395 (216-279)||(5537-5600)
scaffold0395 (100-150)||(15501-15553)
[»] scaffold0289 (1 HSPs)
scaffold0289 (123-229)||(1103-1211)
[»] scaffold0150 (1 HSPs)
scaffold0150 (174-260)||(31418-31504)
[»] scaffold0028 (1 HSPs)
scaffold0028 (174-260)||(132016-132102)
[»] scaffold0628 (2 HSPs)
scaffold0628 (139-260)||(3830-3964)
scaffold0628 (139-260)||(8390-8524)
[»] scaffold0171 (1 HSPs)
scaffold0171 (174-279)||(31468-31574)
[»] scaffold0145 (1 HSPs)
scaffold0145 (216-273)||(31869-31926)
[»] scaffold0413 (1 HSPs)
scaffold0413 (188-253)||(4909-4975)
[»] scaffold0280 (1 HSPs)
scaffold0280 (123-236)||(23094-23209)
[»] scaffold0051 (2 HSPs)
scaffold0051 (173-260)||(65846-65934)
scaffold0051 (100-150)||(65762-65814)
[»] scaffold0040 (1 HSPs)
scaffold0040 (189-236)||(104415-104463)
[»] scaffold0561 (1 HSPs)
scaffold0561 (188-254)||(9717-9783)
[»] scaffold0530 (1 HSPs)
scaffold0530 (188-260)||(1798-1871)
[»] scaffold0324 (1 HSPs)
scaffold0324 (213-260)||(3035-3081)
[»] scaffold0273 (1 HSPs)
scaffold0273 (188-260)||(10752-10825)
[»] scaffold0117 (1 HSPs)
scaffold0117 (174-263)||(47296-47384)
[»] scaffold0034 (1 HSPs)
scaffold0034 (188-236)||(52922-52972)
[»] scaffold0017 (1 HSPs)
scaffold0017 (187-236)||(193728-193779)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-254)||(126107-126173)
[»] scaffold0621 (2 HSPs)
scaffold0621 (174-263)||(1398-1487)
scaffold0621 (174-263)||(5815-5904)
[»] scaffold0420 (1 HSPs)
scaffold0420 (188-253)||(6985-7050)
[»] scaffold0228 (2 HSPs)
scaffold0228 (123-176)||(21273-21324)
scaffold0228 (214-260)||(21375-21421)
[»] scaffold0100 (3 HSPs)
scaffold0100 (174-263)||(16968-17057)
scaffold0100 (100-150)||(16883-16935)
scaffold0100 (174-260)||(24626-24713)
[»] scaffold0056 (1 HSPs)
scaffold0056 (214-252)||(17957-17995)
[»] scaffold0037 (1 HSPs)
scaffold0037 (100-171)||(68260-68333)
[»] scaffold0022 (3 HSPs)
scaffold0022 (190-254)||(42979-43042)
scaffold0022 (190-254)||(76699-76762)
scaffold0022 (188-254)||(73192-73257)
[»] scaffold0863 (1 HSPs)
scaffold0863 (128-176)||(460-509)
[»] scaffold0839 (1 HSPs)
scaffold0839 (130-171)||(2842-2883)
[»] scaffold0216 (1 HSPs)
scaffold0216 (123-200)||(17891-17970)
[»] scaffold0104 (3 HSPs)
scaffold0104 (188-236)||(13359-13408)
scaffold0104 (188-236)||(15777-15826)
scaffold0104 (188-236)||(17797-17846)
[»] scaffold0036 (1 HSPs)
scaffold0036 (167-236)||(67110-67181)
[»] scaffold0005 (1 HSPs)
scaffold0005 (188-236)||(266736-266785)
[»] scaffold0141 (1 HSPs)
scaffold0141 (99-176)||(36566-36644)
[»] scaffold0130 (1 HSPs)
scaffold0130 (216-263)||(27220-27265)
[»] scaffold0049 (1 HSPs)
scaffold0049 (99-176)||(78168-78246)


Alignment Details
Target: scaffold0403 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 4086 - 4248
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4086 atcagagtaaaacatcacataaacaggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 4185  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  4186 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 20535451 - 20535613
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20535451 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 20535550  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||| | ||| | |||||||||||||||||    
T  20535551 taattcaacatcataaaaagtcttggcacgcaggcctcgtcaaaat-atctcataaattcagtt 20535613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 123 - 279
Target Start/End: Original strand, 31970567 - 31970722
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaa-agtcttg 221  Q
    |||||||||||||||||||| ||| |||  |||||| |||| | |||||||||||||||| |||||||||||| |||||||||| ||||||| |||||||    
T  31970567 ggatatcacacttcttaaaa-tctcaaat-agataaataacaatttatccttcatcaacaaaatagcagcggagttaattcaacgtcataaatagtcttg 31970664  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||    
T  31970665 gcacgcaggcctcataaaagtcatctcataaattcagttaagcaacatgaaaacatag 31970722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 18880104 - 18879943
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||  |||||| |||  | |||||||||||||||| ||||||||| ||||    
T  18880104 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcagaat 18880006  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| |||||    
T  18880005 taattcaacatcataaaaagtcttggcacgcagacctcatcaaaat-atctcataaatccagtt 18879943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 17140180 - 17140316
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaat-tatccttcatcaacataatagcagcggaattaattcaacatcat-aaaagtctt 220  Q
    ||||||| ||||||||||||||||||||  |||||| | | |||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  17140180 ggatatctcacttcttaaaaatcttaaat-agataaatta-taatctatccttcatcaacaaaatagcagcgaaattaattcaacatcataaaaagtctt 17140277  T
Q  221 ggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||| ||| | |||||||||||||||||    
T  17140278 ggcacgcaggcctcatcaaa-ttatctcataaattcagtt 17140316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 279
Target Start/End: Complemental strand, 5867108 - 5866954
Alignment:
Q  123 ggatatcacacttcttaaaaatctt-aaaacagataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcataaa-agtct 219  Q
    |||||||||||||||||||| |||  |||| |||||| |||  | ||||||||||   |||||| |||||||||||||| |||||| ||||||| |||||    
T  5867108 ggatatcacacttcttaaaa-tctcgaaaatagataaataataatttatccttca---acataa-agcagcggaattaaattcaacttcataaatagtct 5867014  T
Q  220 tggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||    
T  5867013 tggcacgcaggcctcataaaagtcatctcataaattcagttaagtaacatgaaaacatag 5866954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 21248622 - 21248756
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||  | |||||||   ||||||||| ||||||||||||    
T  21248622 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatctcaaaatagataaataataatttatcct---tcaacataaaagcagcggaatt 21248718  T
Q  199 aa-ttcaacatcataaa-agtcttggcacgcaggcctc 234  Q
    || |||||| |||||||  |||||||||||||||||||    
T  21248719 aacttcaacttcataaattgtcttggcacgcaggcctc 21248756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 18819229 - 18819140
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||  || |||||||| |||||||||    
T  18819229 tcatcaacgtaatagcagcggaattaattcaacatcataaaaagtcttggcacgcaggcctcatcaaa-acacctcataaaatcagttcaa 18819140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 21254448 - 21254594
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca---------tcaacataatagc 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||  | ||||||||||         ||||||||| |||    
T  21254448 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatctcaaaatagataaataataatttatccttcaacataaacttcaacataaaagc 21254547  T
Q  190 agcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctc 234  Q
    ||||||||||| |||||| |||||||  |||||||||||||||||||    
T  21254548 agcggaattaacttcaacttcataaattgtcttggcacgcaggcctc 21254594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 21919753 - 21919668
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  21919753 tcatcaacgtaatagcagcggattaaattcaacttcataaatagtcttggcacgcaggcctcataaaa--catctcataagttcagtt 21919668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 263
Target Start/End: Original strand, 40398106 - 40398257
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacataatagcagcggaattaa-ttcaacatc 209  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||||            || |||||||| ||||||||||||||| |||||||||    
T  40398106 ggatatcacacttcttaaag-tcataaaagagataattaactaattatcctcgtcagcataaatcttcaacatattagcagcggaattaaattcaacatc 40398204  T
Q  210 ataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||| ||||||||| ||||||||||| |||  || ||||||||||||||||||    
T  40398205 ataaaaagtcttggcatgcaggcctcatcaaa--cacctcataaattcagttcaa 40398257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 7372132 - 7372195
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| || | |||||||||||||    
T  7372132 gtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacatgaaaacatag 7372195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 23777620 - 23777555
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacata 278  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||| || | ||||||||||||    
T  23777620 aaagtcttggcatgcaggcctcataaatgtcatctcaaaaattcagttaaacaacatgaaaacata 23777555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 23777763 - 23777667
Alignment:
Q  80 ataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||| | |||||| || |||||||||||||||||||||||| |||||  ||||||||| |||||| ||||  ||||||||||| ||||||| ||||    
T  23777763 ataaaactttcatttgaattatcagagtaaaacatcatgaaactggatactacacttctt-aaaatcataaatgagataattaacaaattatctttca 23777667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 263
Target Start/End: Original strand, 22625950 - 22626124
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct----------tcatcaacataat 186  Q
    ||||||||||||||||||  | ||  ||||||||||||||||||||||| | |||||||||| |||| | |||||||          |||||||| ||||    
T  22625950 tatcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcct-aaacagataaataacaatttatccttcaacataaatcatcaacgtaat 22626048  T
Q  187 agcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    ||||||||| | |||||  || | ||||  ||||||||||||||||||||| |||  || ||||||||||||||||||    
T  22626049 agcagcggattaaattcttcaacgtaaattgtcttggcacgcaggcctcatcaaa--cacctcataaattcagttcaa 22626124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 21672931 - 21673020
Alignment:
Q  173 ttcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||||||||| |||||||||| | |||||  ||||||||| || ||||||||||||||||||| |||  ||||||||||| |||||||||    
T  21672931 ttcatcaacatattagcagcggattaaattcttcatcataaatagccttggcacgcaggcctcatcaaa-acatctcataaa-tcagttcaa 21673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 16411112 - 16410995
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||||||||    |||||| |||  | ||| |||||||||||  ||||||||||||||| |||||||  |||||| ||||    
T  16411112 ggatatcaca-ttcttaaaaatcttaaaaacatagataaataataatttacccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaag 16411015  T
Q  217 tcttggcacgcaggcctcat 236  Q
    | ||||||||||||||||||    
T  16411014 ttttggcacgcaggcctcat 16410995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 23647943 - 23648016
Alignment:
Q  186 tagcagcggaatta-attcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||  |||||||||| |||||    
T  23647943 tagcagcggaattccattcaacatcataaaaagtcttagcacgcaggcctcataaaa-acatctcataagttcag 23648016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 28645191 - 28645145
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||    
T  28645191 aagtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 28645145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 28649775 - 28649729
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||    
T  28649775 aagtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 28649729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 25485200 - 25485152
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  25485200 ggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 25485152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 15603822 - 15603707
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcataa-aagtc 218  Q
    |||||||||| |||||||||| |||||||||  ||||| |||  | |||||||||||| ||| ||  |||||||| |||| ||||| ||||| | |||||    
T  15603822 ggatatcaca-ttcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggatttaaattcaa-atcatcataagtc 15603725  T
Q  219 ttggcacgcaggcctcat 236  Q
    ||||||||||||||||||    
T  15603724 ttggcacgcaggcctcat 15603707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 21396859 - 21396806
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaa 151  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||||||    
T  21396859 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaa 21396806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 21791352 - 21791299
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaa 151  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||||||    
T  21791352 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaa 21791299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 22011465 - 22011378
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    ||||||||| |||||  || |||||||||||||| |||||  ||||||||| ||||||||||||||||||||| |||  |||||||||||    
T  22011465 ttatccttcttcaaccaaagagcagcggaattaaattcaaatcatcataaa-gtcttggcacgcaggcctcattaaa-acatctcataaa 22011378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 20493554 - 20493619
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| |||||||| || ||||||  |||||||||||| |||||||||||||  |||||||||||    
T  20493554 gcagcggatttaattcatcaacataaataagtcttggcacgaaggcctcataaaa--catctcataaa 20493619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 22819539 - 22819610
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||| ||| ||| |  ||||||||| |||||||||||||||||||||    
T  22819539 ttatccttcatcaaccaaatagcagcggaaataaattctaatcatcataaa-gtcttggcacgcaggcctcat 22819610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 22874419 - 22874460
Alignment:
Q  219 ttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  22874419 ttggcgcgcaggcctcataaaaaccatctcataaattcagtt 22874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 41597382 - 41597423
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  41597382 acacttcttaaaaatcataaatgagataattaactaattatc 41597423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 45291650 - 45291609
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  45291650 acacttcttaaaaatcataaatgagataattaactaattatc 45291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 22874323 - 22874363
Alignment:
Q  136 cttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||| ||||||||||||||||| ||||||| ||||    
T  22874323 cttaaaaatcataaaacagataattaacaaattatctttca 22874363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 45131788 - 45131712
Alignment:
Q  187 agcagcggaattaa-ttcaacat-cataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||| || |||||| |||||| ||||| ||||||||||| ||| |||||||| ||||||||    
T  45131788 agcagcggaattaacttcaaaattcataaatagtcttagcacgtaggcctcataatagttatctcatatattcagtt 45131712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 12398444 - 12398606
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12398444 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcatcataatagcagcggaat 12398543  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  12398544 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 12398606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 13441573 - 13441735
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  13441573 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttagaacaaataattaagtaattatccttcatcaacataatagcagcggaat 13441672  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  13441673 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 13441735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 20700198 - 20700039
Alignment:
Q  100 atcagagtaaaacatca-tgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20700198 atcagagtaaatcatcacttaaacgggatatcacacttcttaaa--tcataaaacagataattaactaattatcct-catcaacataatagcagcggaat 20700102  T
Q  198 taa-ttcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||| |||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  20700101 taaattcaacatcataaaagtcttggcacgcaggcctcatcaaaat-atcttataaattcagtt 20700039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 17498600 - 17498747
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatca----------acataatagcagcggaattaattcaacatcata 212  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||          || |||||| |||||||||| ||||||||||||    
T  17498600 ggatatcacacttcataaaaatcataaaacagataattaactaattatccttcaacataaatcattaacgtaatagtagcggaattatttcaacatcata 17498699  T
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17498700 aaagtcttggcacgcagacctcataaaagtcatctcataaattcagtt 17498747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 17487127 - 17487265
Alignment:
Q  132 acttcttaaaaatcttaaaacagataattaactaattatccttcatca----------acataatagcagcggaattaattcaacatcataaaagtcttg 221  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||          || ||||||||||||||||| |||||||||||||||||||||    
T  17487127 acttcataaaaatcataaaacagataattaactaattatccttcaacataaatcattaacgtaatagcagcggaattatttcaacatcataaaagtcttg 17487226  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17487227 gcacgcaggcctcataaaagtcatctcataaattcagtt 17487265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 260
Target Start/End: Original strand, 14972102 - 14972277
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacata 184  Q
    ||||||||||||||||||  | ||  |||||||||||||||||| | || | ||| |||||||||||||||||||||            |||||||||||    
T  14972102 tatcagagtaaaacatcacataaacgggatatcacacttcttaaga-tcatgaaagagataattaactaattatcctcatcaacataaatcatcaacata 14972200  T
Q  185 atagcagcggaattaa-ttcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
     ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14972201 ttagcaacggaattaaattcaacatcataaaagtcttggcacgcaggcctcataaaaaccatctcataaattcagtt 14972277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 25477245 - 25477133
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa-agtctt 220  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||||| || |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  25477245 ggatatcacacttcttaaaaaa--taaaagagataattaactaattatcc-tcgtcaacatattagcagcggaattaaattcaacatcataaatagtctt 25477149  T
Q  221 ggcacgcaggcctcat 236  Q
    ||||||||||||||||    
T  25477148 ggcacgcaggcctcat 25477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 95 - 265
Target Start/End: Complemental strand, 23078259 - 23078088
Alignment:
Q  95 caaatatcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaa-acagataattaactaattatccttcatcaacataatagcagc 192  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| |  ||||| |||  | ||| |||||||||||| ||||||| |    
T  23078259 caaatatcagagtaaaacatcatgaaacgggatatcacacttcttaaaa-tctcaaatatggataaataataatttacccttcatcaacaaaatagcaac 23078161  T
Q  193 ggaatt-aattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    |||||| ||||| |||||||||  |||||||||||||||||| || |||  ||| ||||||||| |||||||||    
T  23078160 ggaatttaattcgacatcataagtgtcttggcacgcaggccttatcaaa-acatatcataaatttagttcaata 23078088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 15458647 - 15458499
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc----------atcaacataatagcagcggaattaattcaacatcata 212  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||          |||||| ||||||||||||| | |||||  || ||||    
T  15458647 ggatatcacacttcttaaaaatcataaaacaaataattaactaattatccttcatcataaatcatcaacgtaatagcagcggattaaattcttcaacata 15458548  T
Q  213 aa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||  |||||||||||||||||||||||||  |||||||||| |||||||    
T  15458547 aattgtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 15458499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 13211147 - 13211054
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||| | |||||||||| ||||||    
T  13211147 ttatccttcatcaacaaaatagcagcggatttaattcaacatcataaaaagtcttggcacgcagacctcatcaaaat-atctcataaaatcagtt 13211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 11425523 - 11425438
Alignment:
Q  177 tcaacataatagcagcggaatt-aattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  11425523 tcaacatattagcagtggaattgaattcaacatcataaaaagtcttggcacgcaggcctcataaaaatcatctcataagttcagtt 11425438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 23083930 - 23083844
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  23083930 tcatcaacataatagcagcggattaaattcaacttcataaatagtcttggcacgcaggcctcataaaa-acatctcataagttcagtt 23083844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 26682657 - 26682746
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||  || |||||||| |||||||||    
T  26682657 tcatcaacgtaatagcagcggaattaattcaacatcataaaaaatcttggcacgcaggcctcatcaaa-acacctcataaaatcagttcaa 26682746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 30027791 - 30027942
Alignment:
Q  100 atcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagcag 191  Q
    ||||||||||| |||||  ||  ||||||||||||||||||||||| ||||| |||||| |||  | |||||||||| ||| |||        || ||||    
T  30027791 atcagagtaaatcatcacaaacgggatatcacacttcttaaaaatcgtaaaatagataaataaaaatttatccttcaacaaaatacttcaaacatcgcag 30027890  T
Q  192 cggaattaattcaacatcataaa---agtcttggcacgcaggcctcataaaa 240  Q
    |||||||| |||| |||||||||   ||||||||||||||||||||||||||    
T  30027891 cggaattagttcatcatcataaataaagtcttggcacgcaggcctcataaaa 30027942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 43840285 - 43840348
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||| ||||||||||| |||| || || | |||||||||||||    
T  43840285 gtcttggcacgcaggcctcataaaaatcatctcataagttcacttaaacaacatgaaaacatag 43840348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 12502812 - 12502883
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  12502812 ttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaagtcttggcacgcaggcctcat 12502883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 26197271 - 26197139
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaaca--tcataaaagt 217  Q
    |||||||||| |||||||||| |||||||||  ||||| |||  | |||||||||||| ||| ||  ||||||||||||| ||||| |  ||||||| ||    
T  26197271 ggatatcaca-ttcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaaaacttcataaa-gt 26197174  T
Q  218 cttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    ||||||||||||||||||||||| | ||||||||||    
T  26197173 cttggcacgcaggcctcataaaaat-atctcataaa 26197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 30025308 - 30025384
Alignment:
Q  100 atcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    ||||||||||| |||||  ||  ||||||||||||||||||||||| ||||| |||||| |||| | ||||||||||    
T  30025308 atcagagtaaatcatcacaaacgggatatcacacttcttaaaaatcgtaaaatagataaataacaatttatccttca 30025384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 30029060 - 30029211
Alignment:
Q  100 atcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagcag 191  Q
    ||||||||||| |||||  ||  |||||||||||||| |||||||| ||||| |||||| |||| | |||||||||| ||| |||        || ||||    
T  30029060 atcagagtaaatcatcacaaacgggatatcacacttcataaaaatcgtaaaatagataaataacaatttatccttcaacaaaatacttcaaacatcgcag 30029159  T
Q  192 cggaattaattcaacatcata---aaagtcttggcacgcaggcctcataaaa 240  Q
     ||||||| |||| |||||||   |||||||||| |||||||||||||||||    
T  30029160 tggaattagttcatcatcataaataaagtcttggtacgcaggcctcataaaa 30029211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 40214493 - 40214447
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||    
T  40214493 aagtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 40214447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 44493966 - 44494039
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  44493966 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 44494039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 30024040 - 30024116
Alignment:
Q  100 atcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    ||||||||||| |||||  ||  ||||||||||||||||||||||| ||||| | |||| |||| | ||||||||||    
T  30024040 atcagagtaaatcatcacaaacgggatatcacacttcttaaaaatcgtaaaatatataaataacaatttatccttca 30024116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 50242086 - 50242134
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  50242086 ggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 50242134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 9512281 - 9512327
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  9512281 aaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 9512327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 9520256 - 9520302
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  9520256 aaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 9520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 12936404 - 12936358
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  12936404 aaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 12936358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 1466726 - 1466685
Alignment:
Q  197 ttaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  1466726 ttaattcaacatcataaataagtcttggcacgcaggcctcat 1466685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 8898284 - 8898325
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  8898284 acacttcttaaaaatcgtaaatgagataattaactaattatc 8898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 16096659 - 16096746
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| | |||||||| | |||||  || ||||||  ||||||||||||||||||| || |||  ||||||||||||||||||    
T  16096659 tcatcaacatattcgcagcggattaaattcttcaacataaataagtcttggcacgcaggccttatcaaa-acatctcataaattcagtt 16096746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 17736468 - 17736509
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  17736468 acacttcttaaaaatcataaatgagataattaactaattatc 17736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 19037737 - 19037778
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  19037737 acacttcttaaaaatcataaatgagataattaactaattatc 19037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 22148747 - 22148706
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  22148747 acacttcttaaaaatcataaatgagataattaactaattatc 22148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 26682572 - 26682624
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaa 150  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||    
T  26682572 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaa 26682624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 49390920 - 49390873
Alignment:
Q  212 aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  49390920 aaaagtcttggcacgcaggcctcatcaaaat-atcttataaattcagtt 49390873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 22359596 - 22359434
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22359596 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcagaat 22359497  T
Q  198 taattcaacatcata-aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  22359496 taattcaacatcatacaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 22359434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 22368110 - 22368018
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22368110 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaaa 22368018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 21302346 - 21302242
Alignment:
Q  175 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || | ||||||||    
T  21302346 catcaacataatagcagcagaattaattcaacatcataaaagtcttggcacgcaggcctcatattagtcatctcataaattcagttaaaaaacatgaaaa 21302247  T
Q  275 catag 279  Q
    |||||    
T  21302246 catag 21302242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 27240604 - 27240509
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27240604 ttatccttcatcaacaaaatagcagcggaattaaatttaacatcataaatagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 27240509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 22531497 - 22531636
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaa 196  Q
    ||||||||||||||||||  | ||  ||||||||||||||||||||  | ||||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  22531497 tatcagagtaaaacatcacataaatgggatatcacacttcttaaaa--cataaaagagatgattaactaattatcct-catcaacataatagcagcggaa 22531593  T
Q  197 tt-aattcaacatcat--aaaagtcttggcacgcaggcctcat 236  Q
    || |||||||||||||  |||||||||||||||||||||||||    
T  22531594 ttaaattcaacatcattaaaaagtcttggcacgcaggcctcat 22531636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 22356262 - 22356173
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa 214  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22356262 ggatatcacacttcttaaa--tcataaaacagataattaactaattatcctt-atcaacataatagcagcggaattaaattcaacatcataaa 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 22357948 - 22357859
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa 214  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22357948 ggatatcacacttcttaaa--tcataaaacagataattaactaattatcctt-atcaacataatagcagcggaattaaattcaacatcataaa 22357859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 34509088 - 34509173
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||  |||||||    
T  34509088 tcaacatattagcagcggaattaagttcaacatcataaaaagtcttggcacgcaggcctcatgaaaatcatctcatatgttcagtt 34509173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 20134494 - 20134576
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
    ||||| || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||    
T  20134494 tcaacgtattagcagcggaattaaattcaacatcataaaaagtcttggcacgcaggcctcataaaa-acatctcataagttcag 20134576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 22444765 - 22444719
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  22444765 aaagtcttggcacgcaggcctcataaaagtcatctcaaaaattcagt 22444719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 22449999 - 22449953
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  22449999 aaagtcttggcacgcaggcctcataaaagtcatctcaaaaattcagt 22449953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 27251536 - 27251447
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  27251536 tcaacataatagcagtggaattaaattcaacatcataaattgtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 27251447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 21788882 - 21788824
Alignment:
Q  175 catcaacataatagcagcggaattaa-ttcaacatcataaaagtcttggcacgcaggcc 232  Q
    ||||||| || ||||||||||||||| |||||  |||||||||||||||||||||||||    
T  21788882 catcaacgtagtagcagcggaattaaattcaatgtcataaaagtcttggcacgcaggcc 21788824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 34983041 - 34982968
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  34983041 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 34982968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 3473786 - 3473654
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacaga--taattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat--aaaagt 217  Q
    |||||||||| |||||||||| ||||||||| |  ||| |||  | |||||||||||| ||| ||  ||||||||||||| ||||| |||||  ||||||    
T  3473786 ggatatcaca-ttcttaaaaaccttaaaacataaataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaa-atcattaaaaagt 3473689  T
Q  218 cttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    ||||||||||||||||||| |||  |||||||||||    
T  3473688 cttggcacgcaggcctcattaaa-acatctcataaa 3473654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 17679432 - 17679315
Alignment:
Q  123 ggatatcacacttcttaaaaatctt-aaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaag 216  Q
    |||||||||| |||||||||||||| ||||||  ||||| |||  | |||||||||||||||  ||||| |||||||| || |||||  ||||||||| |    
T  17679432 ggatatcaca-ttcttaaaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagtagcggaataaaattcaaatcatcataaa-g 17679335  T
Q  217 tcttggcacgcaggcctcat 236  Q
    ||||||||||||||||||||    
T  17679334 tcttggcacgcaggcctcat 17679315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 33680289 - 33680376
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  || ||||||  |||||||||||| ||||||||| |||  ||||||||||||||||||    
T  33680289 tcatcaacatattagcagcggattaaattcttcaacataaataagtcttggcacgtaggcctcatcaaa-acatctcataaattcagtt 33680376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 34975905 - 34975857
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  34975905 ggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 34975857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 35983027 - 35982977
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    ||||| || ||||||||||||||||||  ||||||||||||||||||||||    
T  35983027 gcagcagatttaattcaacatcataaataagtcttggcacgcaggcctcat 35982977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 50211086 - 50211036
Alignment:
Q  125 atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||| ||||    
T  50211086 atatcacacttcttaaaa-tcataaaacagataattaacaaattatctttca 50211036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 16369114 - 16369049
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||| ||| |||||||||||||||||| |||||||||||| ||||||||| |||  |||||||||||    
T  16369114 gcagtggatttaattcaacatcataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 16369049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 50685936 - 50686001
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  50685936 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 50686001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 52928759 - 52928714
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||    
T  52928759 aagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 52928714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 21704306 - 21704347
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  21704306 acacttcttaaaaatcataaatgagataattaactaattatc 21704347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 34508997 - 34509072
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct 173  Q
    ||||||||||||||||||  | ||  |||||||||||||||| ||| || ||||| ||||||||||| |||||||||    
T  34508997 tatcagagtaaaacatcacataaacgggatatcacacttctt-aaagtcataaaagagataattaacaaattatcct 34509072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 411968 - 411831
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  411968 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaaaagtcttg 411869  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
     |||||||||||||| ||| | |||||||||||||||||    
T  411868 tcacgcaggcctcatcaaaat-atctcataaattcagtt 411831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 340724 - 340678
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||    
T  340724 aagtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 340678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 21901332 - 21901175
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21901332 atcagagtaaaacatcacataaacgggatatcacatttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 21901233  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaatt 255  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||    
T  21901232 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaatt 21901175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 77 - 279
Target Start/End: Complemental strand, 22732342 - 22732129
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||| ||||||| ||     
T  22732342 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacgggatatcacacttctt-aaaatcataaatgagataattaacaaattatctttt 22732244  T
Q  176 atca--------acataa-tagcagcggaattaattcaacatcat---aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    | ||         || || | ||||||| || | |||| ||||||    |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22732243 aacatagttatttcaaaactcgcagcgg-ataagttcatcatcattaataaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttaaa 22732145  T
Q  264 tagcatgaaaacatag 279  Q
     | |||||||||||||    
T  22732144 caacatgaaaacatag 22732129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 38926 - 38812
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaattcaa-catcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaat 264  Q
    |||||||||||||||| |||||||||| | ||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |      
T  38926 ttatccttcatcaacaaaatagcagcgaagttaattcaaacgtcataaatagtcttggcacgcaagcctcataaaagtcatctcataaattcagttaagc 38827  T
Q  265 agcatgaaaacatag 279  Q
    | |||||||||||||    
T  38826 aacatgaaaacatag 38812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 23059768 - 23059880
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa-agtctt 220  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||| |||| |||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  23059768 ggatatcacacttcttaaaa--cataaaagagataattaactaattgtcct-catcaacataatagtagcggaattaaattcaatatcataaatagtctt 23059864  T
Q  221 ggcacgcaggcctcat 236  Q
    ||||||||||||||||    
T  23059865 ggcacgcaggcctcat 23059880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 23066300 - 23066399
Alignment:
Q  124 gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa-agtcttg 221  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23066300 gatatcacacttcttaaaa--cataaaagagataattaactaattatcct-catcaacataatagcagcggaattaaattcaacatcataaatagtcttg 23066396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 23075750 - 23075849
Alignment:
Q  124 gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa-agtcttg 221  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23075750 gatatcacacttcttaaaa--cataaaagagataattaactaattatcct-catcaacataatagcagcggaattaaattcaacatcataaatagtcttg 23075846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 279
Target Start/End: Complemental strand, 22739052 - 22738839
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||  | ||||||||| ||||||| |||    
T  22739052 aacataaaaatttcatttcaaatatcatagtaaaacatcatgaaacgggatatcacacttctt-aaaatcataaatgaaataattaacaaattatctttc 22738954  T
Q  176 atca--------acataa-tagcagcggaattaattcaacatcat---aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    | ||         || || | ||||||| || | |||| ||||||    ||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  22738953 aacatagttatttcaaaactcgcagcgg-ataagttcatcatcattaataaaatcttggcacgcaagcctcataaaagtcatctcataaattcagttaaa 22738855  T
Q  264 tagcatgaaaacatag 279  Q
     | |||||||||||||    
T  22738854 caacatgaaaacatag 22738839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 23655280 - 23655104
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatag 188  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| |||  |||||| |||  | ||||||||||          ||||||||||||    
T  23655280 atcagagtaaaacatcatgaaacgggatatcacacttcctaaaaatctcaaat-agataaataataatttatccttcaacataaaacttcaacataatag 23655182  T
Q  189 cagcggaattaattc-aacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||| |||||| |||  ||| |||||||||| ||||||||    
T  23655181 cagcggaattaattcaaacgtcataaatagtcttggcacgcagtcctcatcaaa-acatatcataaattctgttcaata 23655104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 263
Target Start/End: Complemental strand, 24085939 - 24085762
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacata 184  Q
    ||||||||||||||||||  | ||  ||||||| |||||||||||  || ||||| |||||||||||||||||||||            || ||||||||    
T  24085939 tatcagagtaaaacatcacataaacgggatatcgcacttcttaaag-tcataaaagagataattaactaattatcctcgtcagcataaatcttcaacata 24085841  T
Q  185 atagcagcggaatt-aattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
     ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||  || ||||||||||||||||||    
T  24085840 ttagcagcggaattaaattcaacatcataaaaagtcttggcacgcaggcctcatcaaa--cacctcataaattcagttcaa 24085762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 258
Target Start/End: Complemental strand, 23072842 - 23072675
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca---------tcaacataatagc 189  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| |||| |||||| |||  | ||||||||||         ||||||||| |||    
T  23072842 atcagagtaaaacatcatgaaacgggatatcacacttctt-aaaatctcaaaatagataaataataatttatccttcaacataaacttcaacataaaagc 23072744  T
Q  190 agcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
    ||||||||| |||||||| |||||||  ||||||||||| ||||||||| |||  ||| ||||||||||||    
T  23072743 agcggaattaaattcaacttcataaattgtcttggcacgtaggcctcatcaaa--catgtcataaattcag 23072675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 21328445 - 21328330
Alignment:
Q  123 ggatatcacacttcttaaaaatct-taaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattc--aacatcataaaagtc 218  Q
    |||||||||||||||||||| ||| ||||  |||||| |||  | |||||||||||||||| ||||||||||||||| |||||  |||||||| ||||||    
T  21328445 ggatatcacacttcttaaaa-tctctaaagtagataaataataatttatccttcatcaacaaaatagcagcggaattaaattcaaaacatcat-aaagtc 21328348  T
Q  219 ttggcacgcaggcctcat 236  Q
    ||||||||||||||||||    
T  21328347 ttggcacgcaggcctcat 21328330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 23041062 - 23040900
Alignment:
Q  100 atcagagtaaaacatcatg-aaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    ||||||||||||||||||  |||||| |||||||||||||||||| ||| |||  |||||| |||  | ||||||||||   ||||||||| ||||||||    
T  23041062 atcagagtaaaacatcatataaacgggatatcacacttcttaaaa-tctcaaat-agataaataataatttatccttca---acataatagtagcggaat 23040968  T
Q  198 taattcaacatcataa-aagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    |||||||||  |||||  |||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  23040967 taattcaacgacataagtagtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 23040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 22799912 - 22799848
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacata 278  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||||    
T  22799912 aaagtcttggcacgcaggcctcataaaagtcatctcaaaaattcagttaaaca-catgaaaacata 22799848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 23285745 - 23285805
Alignment:
Q  177 tcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  23285745 tcaacataatagcagcggaattatttcaacgtcataaatagtcttggcacgcaggcctcat 23285805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 8946009 - 8946072
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| || | |||||||||||||    
T  8946009 gtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacatgaaaacatag 8946072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 21319514 - 21319399
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac-agataattaactaattatccttcatcaacataatagcagcggaatt-aattc--aacatcataaaagtc 218  Q
    |||||||||||||||||||| ||| ||||  |||||| |||  | |||||||||||||||| ||||||||||||||| |||||  |||||||| ||||||    
T  21319514 ggatatcacacttcttaaaa-tctcaaaagtagataaataataatttatccttcatcaacaaaatagcagcggaattaaattcaaaacatcat-aaagtc 21319417  T
Q  219 ttggcacgcaggcctcat 236  Q
    |||||| |||||||||||    
T  21319416 ttggcatgcaggcctcat 21319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 27345290 - 27345114
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatct-taaaacagataattaactaattatccttca---------tcaacataatag 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||| |||  | ||||||||||         ||||||||| ||    
T  27345290 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaagtctcaaaaatagataaataataatttatccttcaacataaacttcaacataaaag 27345191  T
Q  189 cagcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    |||  ||||| |||||||| |||||||  ||||||||||||||||||||| |||  ||  ||||||||| |||||||||    
T  27345190 cagtagaattaaattcaacttcataaattgtcttggcacgcaggcctcatcaaa--cacgtcataaatttagttcaata 27345114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 28405290 - 28405378
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa---agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  |||||||||   |||||||||||||||||||||| ||| | |||||||||||||||||    
T  28405290 tcatcaacatattagcagcggattaaattcttcatcataaataaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 28405378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 25964580 - 25964448
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat--aaaagt 217  Q
    |||||||||| |||||||||| |||||||||  ||||| |||  | |||||||||||| ||| ||  ||||||||||||| ||||| |||||  ||||||    
T  25964580 ggatatcaca-ttcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaa-atcattaaaaagt 25964483  T
Q  218 cttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    ||||||||||||||||||| |||  |||||||||||    
T  25964482 cttggcacgcaggcctcattaaa-acatctcataaa 25964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 24672846 - 24672904
Alignment:
Q  175 catcaacataatagcagcggaatt-aattcaacatcataaaagtcttggcacgcaggcc 232  Q
    |||||||||| ||||||||||||| |||||||  ||||||||||||| |||||||||||    
T  24672846 catcaacatagtagcagcggaattaaattcaatgtcataaaagtcttagcacgcaggcc 24672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 29594155 - 29594196
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  29594155 acacttcttaaaaatcttaaatgagataattaactaattatc 29594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 37523965 - 37524079
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcataa-aagtc 218  Q
    |||||||||| |||||||||| |||||||||  ||||| |||  | |||||||||||| ||| ||  ||||||||||||| ||||| ||||| | |||||    
T  37523965 ggatatcaca-ttcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaa-atcatcataagtc 37524062  T
Q  219 ttggcacgcaggcctca 235  Q
    |||||||||||||||||    
T  37524063 ttggcacgcaggcctca 37524079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 24689123 - 24689050
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| | |||||| || ||||||  |||||||||||||||||||||| |||  ||||||||||||||||||    
T  24689123 gcagcggattaaattcatcaacataaataagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 24689050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 19692400 - 19692315
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcataaaagtcatctcataa 252  Q
    |||||||||||||||  ||||||||||||| ||| ||| |  ||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  19692400 ttatccttcatcaaccaaatagcagcggaaataaattctaatcatcataaa-gtcttggcacgcaggcctcattaaa--catctcataa 19692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 24316718 - 24316653
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  24316718 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatgaaa-acatctcataaa 24316653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 24679471 - 24679529
Alignment:
Q  175 catcaacataatagcagcggaattaa-ttcaacatcataaaagtcttggcacgcaggcc 232  Q
    ||||||| || ||||||| ||||||| |||||  |||||||||||||||||||||||||    
T  24679471 catcaacgtagtagcagcagaattaaattcaatgtcataaaagtcttggcacgcaggcc 24679529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 24703982 - 24703895
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||||||||||  || |||||||||||| |||||||  |||||| |||||||||||||| ||||||||| |||  |||||||||||    
T  24703982 ttatccttcatcaaccaaaaagcagcggaattaaattcaaatcatcat-aaagtcttggcacgtaggcctcattaaa-acatctcataaa 24703895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 23104189 - 23104125
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaagt-cttggcacgcaggcctcataaaa 240  Q
    ||||||||| |||||||||||||| |||||| |||||||  | |||||||||||||||||||||||    
T  23104189 tcaacataa-agcagcggaattaaattcaacttcataaattttcttggcacgcaggcctcataaaa 23104125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 23110763 - 23110703
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcat 236  Q
    ||||||||| |||||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  23110763 tcaacataa-agcagcggaattaaattcaacttcataaattgtcttggcacgcaggcctcat 23110703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 24717322 - 24717251
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||| ||||  || |||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  24717322 ttatccttcaccaaccaaaaagcagcggaattaaattcaaatcatcataaa-gtcttggcacgcaggcctcat 24717251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 43136529 - 43136570
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  43136529 acacttcttaaaaatcataaatgagataattaactaattatc 43136570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 123 - 279
Target Start/End: Complemental strand, 22270 - 22116
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaaagtcttgg 222  Q
    |||||||||||||||||||| |||||||   ||||| |||  | |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  22270 ggatatcacacttcttaaaa-tcttaaatt-gataaataataatttatccttcatcaacaaaatagcagcggaattaattcaacatcacaaaagtcttgg 22173  T
Q  223 cacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  22172 cacgcaggcctcataaaagtcatctcataaattcagttaaacaacatgaaaacatag 22116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 12698068 - 12698230
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||| ||||||||||||| || ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  12698068 atcagagtaaaacatcacataaacgggatatcaaacttcttaaaaatattcaaatagataatcaactaattatccttcatcaacataatagcagcggaat 12698167  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  12698168 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 12698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 16403285 - 16403149
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaa-agtcttg 221  Q
    |||||||||||||||||||| ||| |||  |||||| |||  | |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16403285 ggatatcacacttcttaaaa-tctcaaat-agataaataataatttatccttcatcaacaaaatagcagcggaattaattcaacatcataaatagtcttg 16403188  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16403187 gcacgcaggcctcataaaagtcatctcataaattcagtt 16403149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 279
Target Start/End: Complemental strand, 28506189 - 28506033
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaa-catcataaa-agtctt 220  Q
    |||||||||||||||||||| ||| |||  |||||| |||  | |||||||||||||||| |||||||||||| ||||||||| | ||||||| ||||||    
T  28506189 ggatatcacacttcttaaaa-tctcaaat-agataaataataatttatccttcatcaacaaaatagcagcggagttaattcaaacgtcataaatagtctt 28506092  T
Q  221 ggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||||||||||||||||||||||| ||||||||| |  | |||||||||||||    
T  28506091 ggcacgcaggcctcataaaagtcatctcattaattcagttaagcaacatgaaaacatag 28506033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 9508433 - 9508594
Alignment:
Q  100 atcagagtaaaacatcatg-aaacg-gatatcacacttcttaaaaatcttaaaacagataattaac--taatt-atccttcatcaacataatagcagcgg 194  Q
    |||||||||||||||||   ||||| |||||||||||||| ||||||||||||  |||||| |||   ||||| |||||||||||||| |||||||||||    
T  9508433 atcagagtaaaacatcacataaacgagatatcacacttctcaaaaatcttaaat-agataaataataataatttatccttcatcaacaaaatagcagcgg 9508531  T
Q  195 aattaattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattca 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| | |||||| |||||||    
T  9508532 aattaattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcacaaattca 9508594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 11996903 - 11996744
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||  | |||| ||   ||||||||| ||||||||||||    
T  11996903 atcagagtaaaacatcatgaaacaggatatcacacttcttaaaaatctcaaaatagataaataataatttatact---tcaacataaaagcagcggaatt 11996807  T
Q  199 -aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
     |||||||| |||||||  ||||||||| ||||||||||| ||| |  ||||||||||||||||    
T  11996806 aaattcaacttcataaattgtcttggcatgcaggcctcatcaaaat-ttctcataaattcagtt 11996744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 40442720 - 40442864
Alignment:
Q  125 atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca---------tcaacataatagcagcggaattaattcaacatcataaa- 214  Q
    |||||||||||||||||| ||| |||| |||||| ||| || ||||||||||         ||| ||||| |||||||||||||||||||| |||||||     
T  40442720 atatcacacttcttaaaa-tctcaaaatagataactaattatttatccttcaacataaacttcagcataaaagcagcggaattaattcaacttcataaat 40442818  T
Q  215 agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  40442819 agtcttggcacgcaggcctcataaaagttatctcataaattcagtt 40442864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 260
Target Start/End: Complemental strand, 15755839 - 15755678
Alignment:
Q  101 tcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||  | ||  |||||| ||| | |||||||||||||||  |||||| |||  | |||||||||||||||| ||||||||| || ||    
T  15755839 tcagagtaaaacatcacataaacgggatataacattacttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcagattt 15755741  T
Q  199 aattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||   |||||||||| ||||||    
T  15755740 aattctacatcataaaaagtcttggcacgcaggcctcatcaaaaatatctcataaaatcagtt 15755678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 100 - 265
Target Start/End: Original strand, 10588275 - 10588439
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||||||||||| || ||| |||||| |||  | |||||||   |||||||||||| ||||||||    
T  10588275 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaat-ttcaaatagataaataataatttatcct---tcaacataatagtagcggaat 10588370  T
Q  198 taattc-aacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    || ||| ||| ||||||| |||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  10588371 tatttcaaacgtcataaatagtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 10588439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 3271135 - 3271265
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaa-acagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtc 218  Q
    |||||||||| ||||||||||||||||| | |||||| |||  | |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||||    
T  3271135 ggatatcaca-ttcttaaaaatcttaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaagtc 3271232  T
Q  219 ttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||||||||| ||| |||  |||||||||||    
T  3271233 ttggcacgcaggccccattaaa--catctcataaa 3271265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 2759404 - 2759537
Alignment:
Q  123 ggatatcacacttcttaaaaatctta-aaaca--gataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||||| |||||  ||||| |||  | |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||    
T  2759404 ggatatcaca-ttcttaaaaatcttagaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaag 2759501  T
Q  217 tcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||||| ||||||||| |||  |||||||||||    
T  2759502 tcttggcacgtaggcctcattaaa-acatctcataaa 2759537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 15164515 - 15164349
Alignment:
Q  99 tatcagagtaaaacatcatgaaacggatatcacacttcttaaaa-atcttaaaacagataattaactaattatccttcatcaacata--------atagc 189  Q
    ||||||||||||||||||  ||  |||||||||||||||||||| ||||| ||| |||||| |||| | |||||||||| ||| |||        || ||    
T  15164515 tatcagagtaaaacatcaccaacgggatatcacacttcttaaaatatctt-aaatagataaataacaatttatccttcagcaaaatacttcaaacatcgc 15164417  T
Q  190 agcggaattaattcaacatcata---aaagtcttggcacgcaggcctcataaaagtcatctcataaatt 255  Q
    ||| |||||| |||| |||||||   |||||||||||||||||||||||| |||  |||||||||||||    
T  15164416 agcagaattagttcatcatcataaataaagtcttggcacgcaggcctcatcaaa-acatctcataaatt 15164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 67042 - 67128
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  ||||||||| ||||||||||||||||||| || |||  ||||||||||| ||||||    
T  67042 tcatcaacatattagcagcggattaaattcttcatcataaatagtcttggcacgcaggccttatcaaa-acatctcataaagtcagtt 67128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 2283082 - 2283009
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||| ||||||||||||||  |||||||||||| ||||||||| |||  ||||||||||||||||||    
T  2283082 gcagcggatttagttcaacatcataaaatagtcttggcacgtaggcctcatcaaa-acatctcataaattcagtt 2283009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 3565051 - 3565005
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||    
T  3565051 aagtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 3565005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 5294945 - 5294872
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  5294945 atcagagtaaaacatcacataaacaggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 5294872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 5296118 - 5296045
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  5296118 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 5296045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 5297291 - 5297218
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  5297291 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 5297218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 17736786 - 17736846
Alignment:
Q  99 tatcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataatt 160  Q
    ||||||||||||||||||   |  ||||||||||||||||||||||||| ||||||||||||    
T  17736786 tatcagagtaaaacatcacatacgggatatcacacttcttaaaaatctt-aaacagataatt 17736846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 9643677 - 9643725
Alignment:
Q  128 tcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||    
T  9643677 tcacacttcttaaaaatcataaacgaaataattaactaattatccttca 9643725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 38226691 - 38226739
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  38226691 ggatattacacttcttaaaaatcataaatgagataattaactaattatc 38226739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 1868772 - 1868707
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  1868772 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 1868707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 14044060 - 14044125
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  14044060 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 14044125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 14354090 - 14354155
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  14354090 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 14354155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 20220967 - 20220902
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  20220967 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 20220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 26211249 - 26211290
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  26211249 acacttcttaaaaatcataaatgagataattaactaattatc 26211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 29329832 - 29329791
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  29329832 acacttcttaaaaatcataaatgagataattaactaattatc 29329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 34200099 - 34200160
Alignment:
Q  177 tcaacataatagcagcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    ||||||||| |||||||||||| |||||||| |||||||  ||||||||||||||| |||||    
T  34200099 tcaacataaaagcagcggaattaaattcaacttcataaattgtcttggcacgcaggactcat 34200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 12429963 - 12430011
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||||||||||||| ||||  || ||||| ||||||||||    
T  12429963 ggatatcacacttcttaaaaatcataaatgaggtaattgactaattatc 12430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 2167 - 2328
Alignment:
Q  100 atcagagtaaaacatca-tgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    ||||||||||||||||| | | || ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  2167 atcagagtaaaacatcactaatacgggatatcacacttcttaaaaagctt-aaacaaataattaactaattatccttcatcaacataatagcagcggatt 2265  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||| | |||||||||||||||||    
T  2266 taattcaacatcataaaaaatcttggcacgcatgcctcatcaaaat-atctcataaattcagtt 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 9551 - 9712
Alignment:
Q  100 atcagagtaaaacatca-tgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    ||||||||||||||||| | | || ||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |    
T  9551 atcagagtaaaacatcactaatacgggatatcacacttcttaaaaagctt-aaacaaataattaactaattatcattcatcaacataatagcagcggatt 9649  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| |||| |||||||| ||| ||||||| ||| | |||||||||||||||||    
T  9650 taattcaacatcataaaaaatcttggcaagcaagcctcatcaaaat-atctcataaattcagtt 9712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 19946 - 20082
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttg 221  Q
    ||||||||||||||||||||||||||||  |||||| |||  | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  19946 ggatatcacacttcttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcggaattaattcaacatcataaaaagtcttg 20044  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  20045 gcacgcaggcctcatcaaagt-atctcataaattcagtt 20082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 1174 - 1278
Alignment:
Q  175 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||    
T  1174 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggccttataaaagtcatctcataaattcagttaaacaacatgaaaa 1273  T
Q  275 catag 279  Q
     ||||    
T  1274 aatag 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 1064 - 1101
Alignment:
Q  203 caacatcataaaagtcttggcacgcaggcctcataaaa 240  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1064 caacatcataaaagtcttggcacgcatgcctcataaaa 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 23391294 - 23391190
Alignment:
Q  175 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||    
T  23391294 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggccttataaaagtcatctcataaattcagttaaacaacatgaaaa 23391195  T
Q  275 catag 279  Q
     ||||    
T  23391194 aatag 23391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 19661641 - 19661538
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||| |||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  19661641 tcaacataa-agcagcggaattaaattcaacttcataaataatcttggcacgcaggcctcataaaagtcatctcataaattcagttaagtaacatgaaaa 19661543  T
Q  275 catag 279  Q
    |||||    
T  19661542 catag 19661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 123 - 258
Target Start/End: Original strand, 25418750 - 25418896
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct----------tcatcaacataatagcagcggaatt-aattcaacatcat 211  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |          |||||||| || ||||||||||||| ||||||||| |||    
T  25418750 ggatattacacttcttaaaaatcataaaacagataattaactaattatctttcatcataaatcatcaacgtattagcagcggaattaaattcaacaccat 25418849  T
Q  212 -aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
     |||||||||||||||||||||||||||||  |||||||||| |||||    
T  25418850 aaaaagtcttggcacgcaggcctcataaaa-acatctcataagttcag 25418896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 8287751 - 8287652
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||||||| |||    
T  8287751 aacataaaaatttcatttcaaatatcagagtaaaatatcatgaaacaggatatcacacttctt-aaaatcatatatgagataattaacaaattatctttc 8287653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 278
Target Start/End: Original strand, 21275591 - 21275799
Alignment:
Q  80 ataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatc 178  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||||| ||||  ||||||||||| ||||||| |||| |    
T  21275591 ataaaaatttcatttcaattatcagagtaaaacatcatgaaacgggatattacacttctt-aaaatcataaatgagataattaacaaattatctttcaac 21275689  T
Q  179 a--------acataatagcagcggaattaattcaacatcat---aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagc 267  Q
    |         || | | ||||||| || | |||| ||||||    ||||||||||||||||||||||||||| ||||||||| ||||| |||| || | |    
T  21275690 ataattatttcaaactcgcagcgg-ataagttcatcatcattaataaagtcttggcacgcaggcctcataaatgtcatctcaaaaatttagttaaacaac 21275788  T
Q  268 atgaaaacata 278  Q
    |||||||||||    
T  21275789 atgaaaacata 21275799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 21293772 - 21293670
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacat-cataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaa 273  Q
    ||||||||| |||||||||||||| ||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||||   || |||||||    
T  21293772 tcaacataa-agcagcggaattaaattcaaaattcataaatagtcttggcacgcaggcctcataatagtcatctcataaattcagttaggtatcatgaaa 21293674  T
Q  274 acat 277  Q
    ||||    
T  21293673 acat 21293670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 258
Target Start/End: Original strand, 25430646 - 25430791
Alignment:
Q  124 gatatcacacttcttaaaaatcttaaaacagataattaactaattatcct----------tcatcaacataatagcagcggaatt-aattcaacatcat- 211  Q
    ||||| |||||||||||||||| ||||||| |||||||| ||||||||||          |||||||| || |||||||  |||| |||||||||||||     
T  25430646 gatattacacttcttaaaaatcataaaacatataattaattaattatccttcatcataaatcatcaacgtattagcagcataattaaattcaacatcata 25430745  T
Q  212 aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||    
T  25430746 aaaagtcttggcacgcaggcctcataaaa-acatctcataagttcag 25430791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 21872445 - 21872537
Alignment:
Q  84 aaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||||| ||||  ||||||||||| ||||||| ||||    
T  21872445 aaatttcatttcaattatcagagtaaaacatcatgaaacgggatattacacttctt-aaaatcataaatgagataattaacaaattatctttca 21872537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 21876725 - 21876817
Alignment:
Q  84 aaatatcatttcaaatatcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||| ||||  ||||||||||| ||||||| ||||    
T  21876725 aaatttcatttcaattatcagagtaaaacatcatgaaacggaatattacacttctt-aaaatcataaatgagataattaacaaattatctttca 21876817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 21886475 - 21886571
Alignment:
Q  80 ataaaaatatcatttcaaatatcagagtaaaacatcatgaaacg-gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  |||| ||||||||| |||||| ||||  ||||||||||| ||||||| ||||    
T  21886475 ataaaaatttcatttcaattatcagagtaaaacatcatgaaacgaaatattacacttctt-aaaatcataaatgagataattaacaaattatctttca 21886571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 21886619 - 21886680
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| || | ||||||||    
T  21886619 aaagtcttggcacgcaggcctcataaatgtcatctcaaaaattcagttaaacaacatgaaaa 21886680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 13024672 - 13024735
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| || | ||| |||||||||    
T  13024672 gtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacataaaaacatag 13024735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 13094856 - 13094919
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| || | ||| |||||||||    
T  13094856 gtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacataaaaacatag 13094919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 21998348 - 21998261
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| |||||||||| || | |||||  || ||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  21998348 tcatcaacgtaatagcagcagattaaattcttcaacataaattgtcttggcacgcaggcctcataaaaatcatctcataagttcagtt 21998261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 21872584 - 21872645
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||| || | ||||||||    
T  21872584 aaagtcttggcatgcaggcctcataaatgtcatctcaaaaattcagttaaacaacatgaaaa 21872645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 21876864 - 21876925
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||| || | ||||||||    
T  21876864 aaagtcttggcatgcaggcctcataaatgtcatctcaaaaattcagttaaacaacatgaaaa 21876925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 21330329 - 21330256
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| | |||||| |||||||||  |||||||||||||||||||||| |||  ||||||||||||||||||    
T  21330329 gcagcggattaaattcatcatcataaataagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 21330256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 21564834 - 21564920
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||| | | |||||   |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||    
T  21564834 tcatcaacatattagcagcgaattaaattctttatcataaatagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 21564920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 21742836 - 21742786
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  21742836 gcagcggatttaattcaacatcataaataagtcttggcacgcaggcctcat 21742786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 21330409 - 21330363
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||    
T  21330409 acacttcttaaaaatcataaatgagataattaactaattatccttca 21330363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 23391404 - 23391367
Alignment:
Q  203 caacatcataaaagtcttggcacgcaggcctcataaaa 240  Q
    |||||||||||||||||||||||||| |||||||||||    
T  23391404 caacatcataaaagtcttggcacgcatgcctcataaaa 23391367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 41096508 - 41096467
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  41096508 acacttcttaaaaatcttaaatgagataattaactaattatc 41096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 20766247 - 20766380
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||| ||||    |||||| |||  | |||||||||||||||  |||||||||||| || |||||||  |||||| ||||    
T  20766247 ggatatcaca-ttcttaaaaatctcaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggagttaaattcaaatcatcat-aaag 20766344  T
Q  217 tcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    ||||||||||||| |||||| |||  |||||||||||    
T  20766345 tcttggcacgcagacctcattaaa-acatctcataaa 20766380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 21910296 - 21910339
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaa 142  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  21910296 atcagagtaaaacatcatgaaacgggatatcacacttctcaaaa 21910339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 29916398 - 29916348
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||||    
T  29916398 gcagcgtatttaattcaacatcataaataagtcttggcacgcaggcctcat 29916348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 1095821 - 1095867
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||||||| |||||  |||||||||| |||||||    
T  1095821 aagtcttggcacgcaggcctcgtaaaaaccatctcataagttcagtt 1095867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 1859830 - 1859713
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||||||||    |||||| |||  | |||| ||||||||||| ||  ||||||||||||| |||||  ||||||||| |    
T  1859830 ggatatcaca-ttcttaaaaatcttaaaaacatagataaataataatttattcttcatcaacaaaactgcagcggaattaaattcaaatcatcataaa-g 1859733  T
Q  217 tcttggcacgcaggcctcat 236  Q
    ||| ||||||||||||||||    
T  1859732 tctcggcacgcaggcctcat 1859713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 10776587 - 10776546
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  10776587 acacttcttaaaaatcataaatgagataattaactaattatc 10776546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 14047326 - 14047367
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  14047326 acacttcttaaaaatcataaatgagataattaactaattatc 14047367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 17409812 - 17409883
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||| ||| ||| |  ||||||||| |||||||||||||||||||||    
T  17409812 ttatccttcatcaaccaaatagcagcggaaataaattctaatcatcataaa-gtcttggcacgcaggcctcat 17409883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21503069 - 21503029
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  21503069 acacttcttaaaa-tcttaaaagagataattaactaattatc 21503029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21731135 - 21731094
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  21731135 acacttcttaaaaatcataaatgagataattaactaattatc 21731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21809255 - 21809214
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  21809255 acacttcttaaaaatcataaatgagataattaactaattatc 21809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 22241148 - 22241099
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  22241148 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 22241099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 22242144 - 22242095
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  22242144 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 22242095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 22243140 - 22243091
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  22243140 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 22243091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 24492786 - 24492838
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaa 150  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||    
T  24492786 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaa 24492838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 23439258 - 23439363
Alignment:
Q  134 ttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgca 228  Q
    ||||||||||||||||| ||  ||||| |||  | ||||||||  |||||| || |||||||||||||| |||||  ||||||||| ||||||||||| |    
T  23439258 ttcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaattaaattcaaatcatcataaa-gtcttggcacgta 23439356  T
Q  229 ggcctca 235  Q
    |||||||    
T  23439357 ggcctca 23439363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 23450625 - 23450730
Alignment:
Q  134 ttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgca 228  Q
    ||||||||||||||||| ||  ||||| |||  | ||||||||  |||||| || |||||||||||||| |||||  ||||||||| ||||||||||| |    
T  23450625 ttcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaattaaattcaaatcatcataaa-gtcttggcacgta 23450723  T
Q  229 ggcctca 235  Q
    |||||||    
T  23450724 ggcctca 23450730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 44052075 - 44052236
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||  |||||| |||  | |||||||||||||||| ||||||||||||||    
T  44052075 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcggaat 44052173  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  44052174 taattcaacatcataaaaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 44052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 265
Target Start/End: Original strand, 12901999 - 12902162
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||  |||||| |||  | ||||||||||   |||||||||||||||||||    
T  12901999 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatctcaaat-agataaataataatttatccttca---acataatagcagcggaatt 12902094  T
Q  199 aattc-aacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||  ||| || ||||||||||||||||    
T  12902095 aattcaaacgtcataaatagtcttggcacgcaggcctcatcaaa-acatatcgtaaattcagttcaata 12902162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 22631738 - 22631837
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||| ||||||| |||    
T  22631738 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacgggatatcacgcttctt-aaaatcataaatgagataattaacaaattatctttc 22631836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 22632656 - 22632755
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||| ||||  ||||||||||| ||||||| |||    
T  22632656 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacatgatatcactcttctt-aaaatcataaatgagataattaacaaattatctttc 22632754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 52874079 - 52873977
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct----------tcatcaacataatagcagcggaattaattcaacatcata 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||          |||||| | ||||||||||||||||||| ||||||||||    
T  52874079 ggatatcacacttcttaaaaatcataaaacagataattaactaattatccttcaacataaatcatcagcgtaatagcagcggaattaatccaacatcata 52873980  T
Q  213 aaa 215  Q
    |||    
T  52873979 aaa 52873977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 16596500 - 16596606
Alignment:
Q  175 catcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    ||||||||||| |||||||||||||| |||||| ||||||   ||||||||| |||||||||||||| |||||||||||||||||||| |  | ||||||    
T  16596500 catcaacataaaagcagcggaattaaattcaacttcataatccgtcttggcatgcaggcctcataaaggtcatctcataaattcagttaagcaacatgaa 16596599  T
Q  273 aacatag 279  Q
    |||||||    
T  16596600 aacatag 16596606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 15614402 - 15614489
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||| | |||||  || ||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  15614402 tcatcaacataatagcagcggattaaattcttcaacataaattgtcttggcacgcaggcctcataaaaatcatctcataagttcagtt 15614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 22635800 - 22635861
Alignment:
Q  218 cttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||    
T  22635800 cttggcacgcaggcctcataaaagtcatctcataaattcagttaaaccacatgaaaacatag 22635861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 15090543 - 15090690
Alignment:
Q  101 tcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatag 188  Q
    ||||||||||||||||  | ||  ||||||||||||||||||||  | ||||| ||||||||||||||||||||||||          |||||||| |||    
T  15090543 tcagagtaaaacatcacataaacgggatatcacacttcttaaaa--cataaaagagataattaactaattatccttcaacataaatcttcaacatattag 15090640  T
Q  189 cagcggaatt-aattcaacatcat-aaaagtcttggcacgcaggcctcat 236  Q
    |||||||||| |||||||||||||  |||||||||||||| |||||||||    
T  15090641 cagcggaattaaattcaacatcatcgaaagtcttggcacgtaggcctcat 15090690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 12773383 - 12773468
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||| | |||||||||| | |||||  ||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||    
T  12773383 tcatcaacaaattagcagcggattaaattcttcatcataaatagtcttggcacgcaggcctcatcaaa--catctcataaattcagtt 12773468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 16240769 - 16240669
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    |||||||| ||||||||||||| | |||||  |  ||||||  ||||||||||||||||||||| ||| ||||||||||||||||||| || | ||||||    
T  16240769 tcatcaacgtaatagcagcggattaaattcttcgacataaattgtcttggcacgcaggcctcatgaaaatcatctcataaattcagttaaacaacatgaa 16240670  T
Q  273 a 273  Q
    |    
T  16240669 a 16240669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 12610149 - 12610222
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  12610149 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 12610222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 15704635 - 15704708
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  15704635 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 15704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 14038037 - 14038082
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||    
T  14038037 aagtattggcacgcaggcctcataaaaaccatctcataaattcagt 14038082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 16270959 - 16270902
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaa 273  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||| || | |||||||    
T  16270959 gtcttggcatgcaggcctcatgaaaatcatctcataaattcagttaaacaacatgaaa 16270902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 5339820 - 5339704
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagt 217  Q
    |||||||||| |||| |||||||||||| ||  ||||| |||  | |||||||| | ||||| || |||||||||||||| |||||  ||||||||| ||    
T  5339820 ggatatcaca-ttctgaaaaatcttaaatcatagataaataataatttatcctttaacaacaaaacagcagcggaattaaattcaaatcatcataaa-gt 5339723  T
Q  218 cttggcacgcaggcctcat 236  Q
    |||||||||||||||||||    
T  5339722 cttggcacgcaggcctcat 5339704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 13593569 - 13593521
Alignment:
Q  128 tcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||    
T  13593569 tcacacttcttaaaaatcataaacgaaataattaactaattatccttca 13593521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 51464763 - 51464715
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  51464763 ggatatcacacttcttaaaaatcataaatgaggtaattaactaattatc 51464715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 7798079 - 7798165
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||||||||| | |||||||| ||||||| | |||||||| |||| |||||| |||  |||||||||| |||||||    
T  7798079 tcatcaacgtaatagcagcggattaaattcaacttcataaatactcttggcaagcagtcctcatgaaa-acatctcataagttcagtt 7798165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 15095828 - 15095878
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||||||    
T  15095828 gcagcggaatttattcaatatcataaataagtcttggcacgcaggcctcat 15095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 15189138 - 15189188
Alignment:
Q  188 gcagcggaattaattcaacatcataa--aagtcttggcacgcaggcctcat 236  Q
    |||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  15189138 gcagcggatttaattcaacatcataaataagtcttgacacgcaggcctcat 15189188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 16375628 - 16375555
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| | |||||| || ||||||  |||||||||||||||||||||| |||  ||||||||||||||||||    
T  16375628 gcagcggattaaattcatcaacataaataagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 16375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 11480704 - 11480655
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  11480704 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 11480655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 15189067 - 15189114
Alignment:
Q  128 tcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  15189067 tcacacttct-aaaaatcataaatgagataattaactaattatccttca 15189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 22631885 - 22631913
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaag 241  Q
    |||||||||||||||||||||||||||||    
T  22631885 aaagtcttggcacgcaggcctcataaaag 22631913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 6955 - 6794
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||  |||||| |||  | |||||||||||||||| ||||||||||||||    
T  6955 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcggaat 6857  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| |||||| |||||||||||||||||| ||| | |||||||||||||||||    
T  6856 taattcaacatcataaaaagtattggcacgcaggcctcatcaaaat-atctcataaattcagtt 6794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 121131 - 121235
Alignment:
Q  175 catcaacataatagcagcggaattaattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||    
T  121131 catcaacataatagcagcggaattaatacaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaatttagttaaacaacatgaaaa 121230  T
Q  275 catag 279  Q
     ||||    
T  121231 tatag 121235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 198041 - 198197
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaa 196  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||  ||||| |||  | |||||||||||||||| |||||||||||||    
T  198041 atcagagtaacacatcatgaaacgggatatcaca-ttcttaaaaatcttaaaacatagataaataataatttatccttcatcaacaaaatagcagcggaa 198139  T
Q  197 ttaa-ttcaa-catcataaaagtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||  |||||||||||    
T  198140 ttaaattcaatcatcataaaagtcttggcacgcaggcctcatcaaa-acatctcataaa 198197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 259
Target Start/End: Complemental strand, 639 - 479
Alignment:
Q  100 atcagagtaaaacatca-tgaaacg-gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    ||||||||||||||||| | ||||| |||||||||||||| ||||||||||||  |||||| |||  | |||||||||||||||| ||||||||||||||    
T  639 atcagagtaaaacatcacttaaacgagatatcacacttctaaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcggaat 541  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    |||||||| ||||| ||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  540 taattcaatatcataaaaagtcttggcacgcaggccgcatcaaaat-atctcataaattcagt 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 19398912 - 19399025
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |  |    
T  19398912 ttatccttcatcaacaaaatagtagcggaattaattcaacgtcataaatagtcttggcacgcaggcctcataaaagtcatcccataaattcagttaagca 19399011  T
Q  266 gcatgaaaacatag 279  Q
     |||||||||||||    
T  19399012 acatgaaaacatag 19399025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 17288663 - 17288552
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcat-aaaagtcttg 221  Q
    ||||||||||||||||||||  | ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  17288663 ggatatcacacttcttaaaa--cataaaagagataattaactaattatcct-catgaacataatagcagcggaattaatttaacatcataaaaagtcttg 17288567  T
Q  222 gcacgcaggcctcat 236  Q
    |||||||||||||||    
T  17288566 gcacgcaggcctcat 17288552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 28497317 - 28497221
Alignment:
Q  141 aaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcat-aaaagtcttggcacgcaggcctcat 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  28497317 aaatcataaaacagataattaactaattatcc-tcatcaacataatagcagcggaattaaattcaacgtcataaaaagtcttggcacgcaggcctcat 28497221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 29809728 - 29809632
Alignment:
Q  141 aaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcat-aaaagtcttggcacgcaggcctcat 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  29809728 aaatcataaaacagataattaactaattatcc-tcatcaacataatagcagcggaattaaattcaacgtcataaaaagtcttggcacgcaggcctcat 29809632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 260
Target Start/End: Original strand, 20593027 - 20593204
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacata 184  Q
    ||||||||||||||||||  | ||  |||||||||||||||||||| || ||||| |||||||||||||||||||||            || ||||||||    
T  20593027 tatcagagtaaaacatcacataaacgggatatcacacttcttaaaa-tcataaaagagataattaactaattatcctcgtcaacataaatcttcaacata 20593125  T
Q  185 atagcagcggaattaa-ttcaacatcataaaa--gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
     ||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||  ||||||||||||||||||    
T  20593126 ttagcagcggaattaaattcaacattataaaaaagtcttggcacgcaggcctcataaaaaccatctcataaattcagtt 20593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 25630270 - 25630171
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaacg-gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||| |||| | |||||||||    
T  25630270 aacataaaaatttcatttcaattatcagagtaaaacatcatgaaacgagatatcactcttcttaaaaatctt-aaatagataaataacaatttatccttc 25630172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 1560536 - 1560697
Alignment:
Q  101 tcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||  | ||  |||||| ||| | |||||||||||||||  |||||| |||  | |||||||||||||||| ||||||||| || ||    
T  1560536 tcagagtaaaacatcacataaacgggatataacattacttaaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagcagcagattt 1560634  T
Q  199 aattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||   |||||||||| ||||||    
T  1560635 aattctacatcataaaaagtcttggcacgcaggcctcatcaaaaatatctcataaaatcagtt 1560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 25722014 - 25722125
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa-agtc-t 219  Q
    ||||||||||||||||| ||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |    
T  25722014 ggatatcacacttcttagaa--cataaaagagataattaactaattatcct-catcaacataatagcagcggaattaaattcaacatcataaatagtctt 25722110  T
Q  220 tggcacgcaggcctc 234  Q
    ||||||| |||||||    
T  25722111 tggcacgaaggcctc 25722125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 25690341 - 25690430
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa 214  Q
    ||||||||||||||||| ||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25690341 ggatatcacacttcttagaa--cataaaagagataattaactaattatcct-catcaacataatagcagcggaattaaattcaacatcataaa 25690430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 25697134 - 25697223
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa 214  Q
    ||||||||||||||||| ||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25697134 ggatatcacacttcttagaa--cataaaagagataattaactaattatcct-catcaacataatagcagcggaattaaattcaacatcataaa 25697223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 35244911 - 35245004
Alignment:
Q  187 agcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacata 278  Q
    |||||||||||||| |||||  ||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||    
T  35244911 agcagcggaattaaattcaaattcataaatagtcttggcacgcaggcctcataatagtcatctcataaattaagttaaatatcatgaaaacata 35245004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 20075909 - 20076077
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacata 184  Q
    ||||||||||||||||||  | ||  |||||||||||||||||||| || ||||| |||||||||||||||||||||            || ||||||||    
T  20075909 tatcagagtaaaacatcacataaacgggatatcacacttcttaaaa-tcataaaagagataattaactaattatcctcgtaaacataaatcttcaacata 20076007  T
Q  185 atagcagcggaattaa-ttcaacatcata-aaagtcttggcacgcaggcctcataaaagtcatctcataa 252  Q
     ||||||||||||||| |||||||||||| |||||||| ||||||| |||||||||||  ||||||||||    
T  20076008 ttagcagcggaattaaattcaacatcatagaaagtcttagcacgcatgcctcataaaaaccatctcataa 20076077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 20639198 - 20639099
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||||||| |||    
T  20639198 aacataaaaatttcatttcgaatattagagtaaaacatcatgaaacaggatatcacacttctt-aaaatcatatatgagataattaacaaattatctttc 20639100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 22780998 - 22780932
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| || | |||||||||||||    
T  22780998 aaagtcttggcacgcaggcctcataataatcatctcataaattcagttaaacaacatgaaaacatag 22780932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 22781145 - 22781046
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaa-cggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||| | ||||||||||| |||||||||||| ||||||||  |||||||||||||||| |||||| ||||  ||||||||||| ||||||| |||    
T  22781145 aacataaaactttcatttcaaatttcagagtaaaacgtcatgaaatgggatatcacacttctt-aaaatcataaatgagataattaacaaattatctttc 22781047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 21831323 - 21831199
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaacg-gatatcacacttcttaaaaatcttaaaac--agataattaactaattatcct 173  Q
    ||||||||||| ||||  ||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||  |||||| |||  | |||||||    
T  21831323 aacataaaaatttcata-caattatcagagtaaaacatcatgaaacgagatatcgca-ttcttaaaaatcttaaaacatagataaataataatttatcct 21831226  T
Q  174 tcatcaacataatagcagcggaattaa 200  Q
    ||||| ||| ||  |||||||||||||    
T  21831225 tcatcgacaaaactgcagcggaattaa 21831199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 21765943 - 21766046
Alignment:
Q  99 tatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaac--agataattaactaattatccttcatcaacataatagcagcgga 195  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||  |||||| |||  | |||||||||||| ||| ||  ||||||||    
T  21765943 tatcagagtaaaacatcatgaaacgggatataaca-ttcttaaaaatcttaaaacatagataaataataatttatccttcatcgacaaaactgcagcgga 21766041  T
Q  196 attaa 200  Q
    |||||    
T  21766042 attaa 21766046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 22409092 - 22409020
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaatt-aattcaacatcat--aaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||   ||||||||||||||||||||||||    
T  22409092 ttatccttcatcaaccaaatagcagcggaattaaattcaaaatcatcataaagtcttggcacgcaggcctcat 22409020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 25607374 - 25607224
Alignment:
Q  100 atcagagtaaaacatcatgaaa-cggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagca 190  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| | ||| |||||| |||| | |||||||||| ||| |||        || |||    
T  25607374 atcagagtaaaacatcatgaaatgggatatcacacatcttaaaaatc-tcaaatagataaataacaatttatccttcagcaaaatatgtcaaacatcgca 25607276  T
Q  191 gcggaattaattcaacatcata---aaagtcttggcacgcaggcctcataaa 239  Q
    |||||||||| ||| |||||||   ||||||| ||||||||||||| |||||    
T  25607275 gcggaattaactcatcatcataaataaagtctaggcacgcaggcctgataaa 25607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 25687829 - 25687883
Alignment:
Q  160 taactaattatccttcatcaacataatagcagcggaatt-aattcaacatcataaa 214  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  25687829 taactaattatcct-catcaacataatagcagcgaaattaaattcaacatcataaa 25687883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 25604281 - 25604133
Alignment:
Q  102 cagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagcagc 192  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||| | ||| |||||| |||| | |||||||||| ||| | |        || |||||    
T  25604281 cagagtaaaatatcatgaaacaggatatcacacatcttaaaaatc-tcaaatagataaataacaatttatccttcagcaaaacatgtcaaacatcgcagc 25604183  T
Q  193 ggaattaattcaacatcata---aaagtcttggcacgcaggcctcataaa 239  Q
    ||||| || ||| |||||||   |||||||||||||||||||||||||||    
T  25604182 ggaatcaactcatcatcataaataaagtcttggcacgcaggcctcataaa 25604133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 25612619 - 25612471
Alignment:
Q  102 cagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagcagc 192  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||| | ||| |||||| |||| | |||||||||| ||| | |        || |||||    
T  25612619 cagagtaaaatatcatgaaacaggatatcacacatcttaaaaatc-tcaaatagataaataacaatttatccttcagcaaaacatgtcaaacatcgcagc 25612521  T
Q  193 ggaattaattcaacatcata---aaagtcttggcacgcaggcctcataaa 239  Q
    ||||| || ||| |||||||   |||||||||||||||||||||||||||    
T  25612520 ggaatcaactcatcatcataaataaagtcttggcacgcaggcctcataaa 25612471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 18179766 - 18179883
Alignment:
Q  123 ggatatcacacttcttaaaaatctt-aaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaag 216  Q
    |||||||||| |||||||||||||| ||||||  ||||| |||  | ||||||||||| |||  |||||||||||||| || |||||  ||||||||| |    
T  18179766 ggatatcaca-ttcttaaaaatcttcaaaacatagataaataataatttatccttcattaaccaaatagcagcggaataaaattcaaatcatcataaa-g 18179863  T
Q  217 tcttggcacgcaggcctcat 236  Q
    ||||||||||||||||||||    
T  18179864 tcttggcacgcaggcctcat 18179883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 4739326 - 4739242
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataa--aagtcttggcacgcaggcctcataaaagtcatctcataaattcag 258  Q
    |||||||| |||  |||||||| | |||||||| ||||||  || ||||||||||||||||||||||||  ||| ||||||||||||    
T  4739326 tcatcaacgtaaatgcagcggattaaattcaacttcataattaaatcttggcacgcaggcctcataaaa--catttcataaattcag 4739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 31165650 - 31165576
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcataaa 239  Q
    ||||| |||||||||| || |||||||||||||| |||||  ||||||||| |||||||||||||| |||||||||    
T  31165650 ttatctttcatcaacaaaacagcagcggaattaaattcaaatcatcataaa-gtcttggcacgcagacctcataaa 31165576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 18403959 - 18403913
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||| |||||||||  |||||||||| |||||||    
T  18403959 aagtcttggcacgcaggactcataaaaaccatctcataagttcagtt 18403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 19651537 - 19651582
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  19651537 aaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagt 19651582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19954360 - 19954295
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| |||||| ||||||||||| |||||||||||| ||||||||| |||  |||||||||||    
T  19954360 gcagcggatttaatttaacatcataaatagtcttggcacgtaggcctcatcaaa-acatctcataaa 19954295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 4644714 - 4644673
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||||||  | |||||||||||||||||    
T  4644714 acacttcttaaaaatcttaaatgatataattaactaattatc 4644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 8230469 - 8230428
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  8230469 acacttcttaaaaatcataaatgagataattaactaattatc 8230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 16015869 - 16015910
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  16015869 acacttcttaaaaatcataaatgagataattaactaattatc 16015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 16493593 - 16493634
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  16493593 acacttcttaaaaatcataaatgagataattaactaattatc 16493634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 16921425 - 16921365
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcat 236  Q
    ||||||||| |||||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  16921425 tcaacataa-agcagcggaattaaattcaacttcataaattgtcttggcacgcaggcctcat 16921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 23535343 - 23535302
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  23535343 acacttcttaaaaatcataaatgagataattaactaattatc 23535302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 1642936 - 1642984
Alignment:
Q  189 cagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  1642936 cagcggaattaatttaacatcataaatattcttggcacgaaggcctcat 1642984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 24974 - 24814
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  |||||||||||||| |||||||||||||  |||||| |||  | |||||||||||||||| ||||| ||||||||    
T  24974 atcagagtaaaacatcacataaacgggatatcacacttcataaaaatcttaaat-agataaataataatttatccttcatcaacaaaatagaagcggaat 24876  T
Q  198 taattcaacatcataaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||| ||||||||||||||||||| |||||| ||| | |||||| ||||||||||    
T  24875 taattcaacatcttaaaagtcttggcacgcagacctcatcaaaat-atctcagaaattcagtt 24814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 23267 - 23308
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  23267 acacttcttaaaaatcataaatgagataattaactaattatc 23308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 279
Target Start/End: Original strand, 12766 - 12922
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaa-catcataaa-agtctt 220  Q
    |||||||||||||||||||| ||| |||  |||||| |||  | |||||||||||||||| |||||||||||| ||||||||| | | ||||| ||||||    
T  12766 ggatatcacacttcttaaaa-tctcaaat-agataaataataatttatccttcatcaacaaaatagcagcggagttaattcaaacgtaataaatagtctt 12863  T
Q  221 ggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||    
T  12864 ggcacgcaggcctcataaaagtcatctcataaattcagttaagcaacatgaaaacatag 12922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 265
Target Start/End: Original strand, 33358 - 33525
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||| |||||| |||  | |||||||||||||||| |||||||||||||||    
T  33358 atcagagtaaaacatcatgaaaagggatatcacacttcttaaaaatctcaaaatagataaataataatttatccttcatcaacaaaatagcagcggaatt 33457  T
Q  199 aa-ttcaa-catcataaaag-tcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    || ||||| | |||||||   |||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  33458 aaattcaaacttcataaattatcttggcacgcaggcctcatcaaa--cacatcataaattcagttcaata 33525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 520 - 359
Alignment:
Q  100 atcagagtaaaacatcatg-aaacg-gatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||   ||||| ||||||||||||||||||||||||||   |||| | |||  | |||||||||||||||| ||||||||||||||    
T  520 atcagagtaaaacatcacataaacgagatatcacacttcttaaaaatcttaatt-agatcaataataatttatccttcatcaacaaaatagcagcggaat 422  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||| | |||||||||| ||||||    
T  421 taattcaacatcataaaaagtcttggcacgcaggtctcatcaaaat-atctcataaactcagtt 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 3209 - 3114
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  3209 ttatccttcatcaacaaaatagcagcggaattaaatttaacatcataagtagtcttggcacgcaggcctcataaaagtcatctcattaattcagtt 3114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 10332 - 10416
Alignment:
Q  177 tcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||| |||||||||| ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10332 tcaacataaaagcagcggaaataattcaaggtcataaatagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 10416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 4033 - 4136
Alignment:
Q  177 tcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaac 275  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||| ||| |  | |||||||||    
T  4033 tcaacataaaagcagcggaattaattcaacgtcataaatagtcttggcacgctgacctcataaaagtcatctcataaattctgttaagcaacatgaaaac 4132  T
Q  276 atag 279  Q
    ||||    
T  4133 atag 4136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 279
Target Start/End: Original strand, 2683 - 2896
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||  ||||||||||| ||||||| |||    
T  2683 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacaggatatcacacttcttaaaa-tcgtaaatgagataattaacaaattatctttc 2781  T
Q  176 atcaa--------cataa-tagcagcggaattaattcaacatcataaa---agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    | ||         || || | |||||||| | | |||| |||||| ||   |||||| |||||||||||||||||||||||||||||||||| |||| ||    
T  2782 aacatagttatttcaaaactcgcagcgga-taagttcatcatcattaataaagtcttagcacgcaggcctcataaaagtcatctcataaattaagttaaa 2880  T
Q  264 tagcatgaaaacatag 279  Q
       |||||||||||||    
T  2881 ccacatgaaaacatag 2896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 279
Target Start/End: Original strand, 9720 - 9933
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||  ||||||||||| ||||||| |||    
T  9720 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacaggatatcacacttcttaaaa-tcgtaaatgagataattaacaaattatctttc 9818  T
Q  176 atcaa--------cataa-tagcagcggaattaattcaacatcataaa---agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    | ||         || || | |||||||| | | |||| |||||| ||   |||||| |||||||||||||||||||||||||||||||||| |||| ||    
T  9819 aacatagttatttcaaaactcgcagcgga-taagttcatcatcattaataaagtcttagcacgcaggcctcataaaagtcatctcataaattaagttaaa 9917  T
Q  264 tagcatgaaaacatag 279  Q
       |||||||||||||    
T  9918 ccacatgaaaacatag 9933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 26506 - 26346
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt 198  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| | |||| |||||| |||  | |||||||   ||||||||| ||||||||||||    
T  26506 atcagagtaaaacatcatgaaacgggatatcacactttttaaaaatatcaaaatagataaataatgatttatcct---tcaacataaaagcagcggaatt 26410  T
Q  199 -aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttca 262  Q
     |||||||| |||||||  |||||||||||||||||||||  ||  ||| ||||||||||||||||    
T  26409 aaattcaacttcataaattgtcttggcacgcaggcctcatctaa--catgtcataaattcagttca 26346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 16357 - 16186
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca--------tcaacataatagca 190  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||  |||  | ||||| ||||        ||||||||| ||||    
T  16357 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatatcaaaatagatatataataatttatcgttcaacataacttcaacataaaagca 16258  T
Q  191 gcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttca 262  Q
    |||||||| |||||||| |||||||  |||||||||||||||||| || |||  ||| ||||||||||||||||    
T  16257 gcggaattaaattcaacttcataaattgtcttggcacgcaggcctaatcaaa--catgtcataaattcagttca 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 27683 - 27782
Alignment:
Q  77 aacataaaaatatcatttcaaatatcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||| ||||||| |||    
T  27683 aacataaaaatttcatttcaaatatcagagtaaaacatcatgaaacgggatatcacacttctt-aaaatcataaatgagataattaacaaattatctttc 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 39604 - 39429
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct--tca----------tcaacataa 185  Q
    |||||||||||||||||  | ||  |||||||||||||||||||  || ||||| |||||||||||||||||||||  |||          ||||||||     
T  39604 atcagagtaaaacatcacattaacgggatatcacacttcttaaag-tcataaaagagataattaactaattatcctcgtcaacataaattttcaacatat 39506  T
Q  186 tagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  39505 tagcagcggaattaaattcaacatcataaaaagtcttggcacgcaggcctcataaaaaccatctcataaattcagtt 39429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 22532 - 22457
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct 173  Q
    ||||||||||||||||||  | ||  |||||||||||||||||||  || ||||| |||||||||||||||||||||    
T  22532 tatcagagtaaaacatcacataaacgggatatcacacttcttaaag-tcataaaagagataattaactaattatcct 22457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 3544 - 3692
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct----------tcatcaacataatagcagcggaattaattcaacatcata 212  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||          |||||||| ||||||||||||| | |||||  || ||||    
T  3544 ggatatcacacttcttaaaaatcataaaacaaataattaactaattatccttcatcataaatcatcaacgtaatagcagcggattaaattcttcaacata 3643  T
Q  213 aa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||  |||||||||||||||||||||||||  |||||||||| |||||||    
T  3644 aattgtcttggcacgcaggcctcataaaaaccatctcataagttcagtt 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 11220 - 11117
Alignment:
Q  177 tcaacataatagcagcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||| ||||||| |||| |||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  11220 tcaacataa-agcagcgtaatttaattcaaattcataaatagtcttggcacgcaggcctcataatagtcatctcataaattcagttaaatatcatgaaaa 11122  T
Q  275 catag 279  Q
    |||||    
T  11121 catag 11117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 29634 - 29531
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||| |||||||||||||| |||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||    
T  29634 tcaacataa-agcagcggaattaaattcaaattcataaatagtcttggcacgcaggcctcataatagtcatctcataaattcagttaagtaacatgaaaa 29536  T
Q  275 catag 279  Q
    |||||    
T  29535 catag 29531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 31954 - 31873
Alignment:
Q  199 aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||  ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| | || |||||||||||||    
T  31954 aattcaaattcataaatagtcttgacacgcaggcctcataatagtcatctcataaattcagttaagtaacatgaaaacatag 31873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 128060 - 128160
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    |||||||| ||||||||||||| | |||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| || | ||||||    
T  128060 tcatcaacgtaatagcagcggattaaattcaacttcataaatagtcttggcacgcaggcctcatgaaaatcatctcataaattcagttaaacaacatgaa 128159  T
Q  273 a 273  Q
    |    
T  128160 a 128160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 31403 - 31497
Alignment:
Q  187 agcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| | || |||||||||||||    
T  31403 agcagcggaattaaattcaacttcataaatagtcttggcacgcaggcctaataaaagttatctcataaattcagttaagtaacatgaaaacatag 31497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 39205 - 39339
Alignment:
Q  125 atatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaacatca-taaaagtcttgg 222  Q
    |||||||||||||||||   | ||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||| ||| ||||||||    
T  39205 atatcacacttcttaaac--cataaaagagataattaactaattatcc-tcatcaacataatagcagcgaaattaaattcaacttcattaatagtcttgg 39301  T
Q  223 cacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||  | ||||||||| | |||||||    
T  39302 cacgcaggactcataggaatcatctcatcagttcagtt 39339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 17276 - 17205
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  || |||||||||| ||| |||||  ||||||||| |||||||||||||||||||||    
T  17276 ttatccttcatcaaccaaagagcagcggaaataaattcaaatcatcataaa-gtcttggcacgcaggcctcat 17205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1172 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1172
Description:

Target: scaffold1172; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 2149 - 2237
Alignment:
Q  177 tcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  2149 tcaacataacagcagcggaattaattcaacatcataaatagtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 12459 - 12596
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||| ||||||  |||||| |||  | ||| |||||||||||| ||||||||||||||    
T  12459 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaa-cttaaat-agataaataataatttacccttcatcaacaaaatagcagcggaat 12556  T
Q  198 taattcaacatcat-aaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||| |||||| |||||| | |||||||||    
T  12557 taattcaacatcataaaaagtattggcatgtaggcctcat 12596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 670 - 537
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaattcaacatcataaa-agtcttg 221  Q
    |||||||||| ||||||||| ||| |||| |||||| | |  | |||||||||||||   ||| |||||||||||||||||||  ||||||| |||||||    
T  670 ggatatcacatttcttaaaa-tctcaaaatagataaatcataatttatccttcatca---taa-agcagcggaattaattcaaattcataaatagtcttg 576  T
Q  222 gcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  575 gcacgcaggcctcataataatcatctcataaattcagtt 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 2349 - 2501
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcctt----------catcaacataata 187  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||| |||||| |||  | ||||||||          ||||||| |||||    
T  2349 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaa-agataaataataatttatccttaaacataaatcatcaacgtaata 2447  T
Q  188 gcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaa 239  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2448 gcagcggaattaaattcaacatcataaaaagtcttggcacgcaggcctcataaa 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 260
Target Start/End: Original strand, 7706 - 7878
Alignment:
Q  99 tatcagagtaaaacatcatg-aaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataat 186  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||||||||  |||||| |||  | ||||||||||          |||||||||     
T  7706 tatcagagtaaaacatcacgtaaacgggatatcacacttcttaaaaatcttaaat-agataaataataatttatccttcaacataaataatcaacataaa 7804  T
Q  187 agcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  7805 agcagcggattaaattcaacttcataaatagtcttggcacgcaggcctcataaaa-acatctcataagttcagtt 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 25165 - 25317
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcctt----------catcaacataata 187  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||| |||||| |||  | ||||||||          ||||||| |||||    
T  25165 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaaa-agataaataataatttatccttaaacataaatcatcaacgtaata 25263  T
Q  188 gcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcataaa 239  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25264 gcagcggaattaaattcaacatcataaaaagtcttggcacgcaggcctcataaa 25317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1655 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1655
Description:

Target: scaffold1655; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 617 - 763
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaacagataattaactaattatccttca---------tcaacataatagc 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||  | ||||||||||         ||||||||| |||    
T  617 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatctcaaaatagataaataataatttatccttcaacaaaaacttcaacataaaagc 716  T
Q  190 agcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctc 234  Q
    |||| |||| |||||||| |||||||  |||||||||||||||||||    
T  717 agcgaaattaaattcaacttcataaattgtcttggcacgcaggcctc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 3137 - 3238
Alignment:
Q  136 cttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatagcagcggaattaattcaacatcat-aaaagtcttggca 224  Q
    |||||||||| ||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3137 cttaaaaatcataaaacagataattaactaattatccttcaacataaatcatcaacgtaatagcagcggaattaattcaacatcatgaaaagtcttggca 3236  T
Q  225 cg 226  Q
    ||    
T  3237 cg 3238  T

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Target: scaffold0124 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 26844 - 26945
Alignment:
Q  136 cttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatagcagcggaattaattcaacatcat-aaaagtcttggca 224  Q
    |||||||||| ||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26844 cttaaaaatcataaaacagataattaactaattatccttcaacataaatcatcaacgtaatagcagcggaattaattcaacatcatgaaaagtcttggca 26943  T
Q  225 cg 226  Q
    ||    
T  26944 cg 26945  T

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Target: scaffold0064 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 46321 - 46422
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||| |||||||||||||| |||||  ||||||  |||||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||    
T  46321 tcaacataa-agcagcggaattaaattcaaattcataagtagtcttggcacgcaggcctcataatagtcatctcataaattcagttaagtaacatgaaaa 46419  T
Q  275 cat 277  Q
    |||    
T  46420 cat 46422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 3824 - 3887
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataa-aagtcttggcacgcaggcctcat 236  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3824 tcatcaacatagtagcagcggaattaattcaacatcataattagtcttggcacgcaggcctcat 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 26337 - 26443
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    |||||||| ||||||||||||| | |||||  || ||||||  ||||||||||||||||||||||||| ||||||||||| ||||||| || | ||| ||    
T  26337 tcatcaacgtaatagcagcggattaaattcttcaacataaattgtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacataaa 26436  T
Q  273 aacatag 279  Q
    |||||||    
T  26437 aacatag 26443  T

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Target: scaffold0120 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 260
Target Start/End: Original strand, 12535 - 12712
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatcct------------tcatcaacata 184  Q
    ||||||||||||||||||  | ||  |||||||||||||||||||| || ||||| ||||| |||||||||||||||            || ||||||||    
T  12535 tatcagagtaaaacatcacataaatgggatatcacacttcttaaaa-tcataaaagagatacttaactaattatcctcgtcaacataaatcttcaacata 12633  T
Q  185 atagcagcggaattaa-ttcaacatcataaaa-gtcttggcacgcaggcctcat-aaaagtcatctcataaattcagtt 260  Q
     ||||||||||||||| ||||||||||||||| |||||||||| |||||||||| ||||  ||||||||||||| ||||    
T  12634 ttagcagcggaattaaattcaacatcataaaaagtcttggcacacaggcctcatgaaaacccatctcataaatttagtt 12712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 15466 - 15572
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    |||||||| ||||||||||||| | || ||  || ||||||  ||||||||||||||||||||||||| ||||||||||| ||||||| || | ||| ||    
T  15466 tcatcaacgtaatagcagcggattaaactcttcaacataaattgtcttggcacgcaggcctcataaaaatcatctcataagttcagttaaacaacataaa 15565  T
Q  273 aacatag 279  Q
    |||||||    
T  15566 aacatag 15572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 18220 - 18063
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaat 197  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||| ||||  |||||| |||  | ||||| ||||   || ||||||||||||| |    
T  18220 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcataaat-agataaataagaatttatctttca---acgtaatagcagcggatt 18125  T
Q  198 taattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
     |||||  || ||||||  ||||||||||||||||||||| |||  || |||||||||||||||    
T  18124 aaattcttcaacataaattgtcttggcacgcaggcctcatcaaa--cacctcataaattcagtt 18063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 33776 - 33691
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||||||||| | |||||  || ||||||  ||||||||||||||||||||| |||  || |||||||||||||||    
T  33776 tcatcaacgtaatagcagcggattaaattcttcaacataaattgtcttggcacgcaggcctcatcaaa--cacctcataaattcagtt 33691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 45229 - 45314
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| ||||||||||||| | |||||  || ||||||  ||||||||||||||||||||| |||  || |||||||||||||||    
T  45229 tcatcaacgtaatagcagcggattaaattcttcaacataaattgtcttggcacgcaggcctcatcaaa--cacctcataaattcagtt 45314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 4003 - 3869
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcataaa-agtctt 220  Q
    |||||||||| ||||||||| ||| |||| |||||| | |  | |||||||||||||   ||| |||||||||||||| |||||  ||||||| ||||||    
T  4003 ggatatcacatttcttaaaa-tctcaaaatagataaatcataatttatccttcatca---taa-agcagcggaattaaattcaaattcataaatagtctt 3909  T
Q  221 ggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  3908 ggcacgcaggcctcataataatcatctcataaattcagtt 3869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 13209 - 13312
Alignment:
Q  177 tcaacataatagcagcggaattaa-ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaa 274  Q
    ||||||||| |||||| ||||||| |||||  ||||||| |||||||||||||||||||||||| | ||||||||||||||||||| | || | ||||||    
T  13209 tcaacataa-agcagcagaattaaattcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaattcagttaagtaacgtgaaaa 13307  T
Q  275 catag 279  Q
    |||||    
T  13308 catag 13312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 18554 - 18640
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  ||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||    
T  18554 tcatcaacatattagcagcggattaaattcttcatcataaatagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 18640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 34703 - 34570
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||||||||    |||||| |||  | |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||    
T  34703 ggatatcaca-ttcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaag 34606  T
Q  217 tcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||||||||||||||| |||  |||||||||||    
T  34605 tcttggcacgcaggcctcattaaa-acatctcataaa 34570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 15536 - 15450
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  ||||||||| |||||||||||||| ||||||| |||  ||||||||||||||||||    
T  15536 tcatcaacatattagcagcggattaaattcttcatcataaatagtcttggcacgcaagcctcatcaaa-acatctcataaattcagtt 15450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1108 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1108
Description:

Target: scaffold1108; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 2629 - 2746
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaag 216  Q
    |||||||||| ||||||||||||||||||    |||||| |||  | |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||    
T  2629 ggatatcaca-ttcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaag 2726  T
Q  217 tcttggcacgcaggcctcat 236  Q
    ||||||||||||||||||||    
T  2727 tcttggcacgcaggcctcat 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 4231 - 4067
Alignment:
Q  101 tcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatag 188  Q
    ||||||||||||||||  | ||  ||||||||||||||||||||  | ||||| ||||||||||||||||||||||||          |||||||| |||    
T  4231 tcagagtaaaacatcacataaacgggatatcacacttcttaaaa--cataaaagagataattaactaattatccttcaacataaatcttcaacatattag 4134  T
Q  189 cagcggaatt-aattcaacatca-taaaagtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||||||| |||||||||||| | |||||||||||||| |||| ||||  || |||||||||||||    
T  4133 cagcggaattaaattcaacatcattgaaagtcttggcacgtaggcttcatccaa-tcatctcataaat 4067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 168847 - 168695
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca----------tcaacataatagcagcggaattaattcaacatcata 212  Q
    |||||||||||||||||||||||| |||| |||||| |||  | ||||||||||          |||||||||||| |   ||||||||||||| |||||    
T  168847 ggatatcacacttcttaaaaatctcaaaatagataaataataatttatccttcaacataaaacttcaacataatagaatttgaattaattcaacgtcata 168748  T
Q  213 aa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    || |||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  168747 aatagtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 168695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 1297 - 1378
Alignment:
Q  199 aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||  ||||||| |||||||||||||||||||||||| | ||||||||||||||||||| | || | |||||||||||    
T  1297 aattcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaattcagttaagtaacgtgaaaacatag 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 3469 - 3385
Alignment:
Q  176 atcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||| |||||||||| | |||||  ||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||    
T  3469 atcaacatattagcagcggactaaattcttcatcataaatagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 3385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 9711 - 9758
Alignment:
Q  100 atcagagtaaaacatcatgaaac-ggatatcacacttcttaaaaatct 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9711 atcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatct 9758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 185 - 98
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||||||||||  ||||||||||||||| |||||||  |||||| |||||||||||||||||||||||| |||  |||||||||||    
T  185 ttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaagtcttggcacgcaggcctcattaaa-acatctcataaa 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 14366 - 14469
Alignment:
Q  100 atcagagtaaaacatcatgaaacgg-atatcacacttcttaaaaatcttaaaac---agataattaactaattatccttcatcaacataatagcagcgga 195  Q
    |||| |||| ||||||||||||||| |||||||| ||||||||||||||||||    |||||| |||  | |||||||||||||||  ||||||||||||    
T  14366 atcatagtataacatcatgaaacgggatatcaca-ttcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcgga 14464  T
Q  196 attaa 200  Q
    |||||    
T  14465 attaa 14469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 225899 - 225988
Alignment:
Q  177 tcaacataatagcagcggaatt-aattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||| |||||||||||| |||||||||||||||| | |||||||||||| ||||||| |||  ||  |||||||||||||||||||    
T  225899 tcaacataaaagcagcggaattaaattcaacatcataaatattcttggcacgcatgcctcatcaaa-acacatcataaattcagttcaata 225988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 32358 - 32287
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  32358 ttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat-aaagtcttggcacgcaggcctcat 32287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 5509 - 5425
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataa--aagtcttggcacgcaggcctcataaaagtcatctcataaattca 257  Q
    ||||||||||| |||||||||| | |||||| || |||||  || |||||||||||| ||||||| |||  |||||||||||||||    
T  5509 tcatcaacatattagcagcggattaaattcatcaacataaataaatcttggcacgcaagcctcatcaaa-acatctcataaattca 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 29918 - 29830
Alignment:
Q  177 tcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||| |||| | ||||||||||||| ||||||| |||||||| ||||||||||||| |||  ||  |||||||||||||||||||    
T  29918 tcaacataacagcaacagaattaattcaacgtcataaatagtcttggaacgcaggcctcatcaaa-acacatcataaattcagttcaata 29830  T

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Target: scaffold0964 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 3457 - 3626
Alignment:
Q  99 tatcagagtaaaacatcatgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttcatcaacata--------atagca 190  Q
    |||||||||||| |||||  ||  ||||||||||||||||||||||| ||||  |||||| |||| | |||||||||| ||| |||        || |||    
T  3457 tatcagagtaaatcatcacaaacgggatatcacacttcttaaaaatcataaat-agataaataacaatttatccttcaacaaaatacttcaaacatcgca 3555  T
Q  191 gcggaattaattcaacatcataaa---agtcttggcacgcaggcctcataaaagtcatctcataaattcagt 259  Q
    |  |||||| |||| |||||||||   |||||||||||||||||||||| ||| | ||||||||||||||||    
T  3556 gtagaattagttcatcatcataaataaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagt 3626  T

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Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 12410 - 12500
Alignment:
Q  177 tcaacataatagcagcggaattaa--ttcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaata 265  Q
    ||||||||| ||||||||||||||  || ||| ||||||| |||||||||||||||||||||| |||  ||  |||||||||||||||||||    
T  12410 tcaacataaaagcagcggaattaaatttgaacgtcataaatagtcttggcacgcaggcctcatcaaa-acacatcataaattcagttcaata 12500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 24943 - 24984
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  24943 acacttcttaaaaatcataaatgagataattaactaattatc 24984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 5600 - 5537
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaaacatag 279  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||| || | ||| |||||||||    
T  5600 gtcttggcacccaggcctcttaaaaatcatctcataaattcagttaaacaacataaaaacatag 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 15553 - 15501
Alignment:
Q  100 atcagagtaaaacatcatg-aaacgg-atatcacacttcttaaaaatcttaaa 150  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||| ||||    
T  15553 atcagagtaaaacatcatataaacgggatatcacacttcttaaaaatcataaa 15501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 1103 - 1211
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaa-acagataattaactaattatccttcatcaacataatagcagcggaatt-aattcaa--catcataaaagtc 218  Q
    |||||||||| ||||||||||||||||| | |||||| |||  | |||||||||||||||  |||||||||| |||| |||||||  |||||| ||||||    
T  1103 ggatatcaca-ttcttaaaaatcttaaacaaagataaataataatttatccttcatcaaccaaatagcagcgaaattaaattcaaatcatcat-aaagtc 1200  T
Q  219 ttggcacgcag 229  Q
    |||||||||||    
T  1201 ttggcacgcag 1211  T

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Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 31418 - 31504
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||| ||| |||||||||| | |||||  ||||||||| || ||||||||||||||||||| ||| | |||||||||||||||||    
T  31418 tcatcaatatattagcagcggattaaattcttcatcataaatagacttggcacgcaggcctcatcaaaat-atctcataaattcagtt 31504  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 132016 - 132102
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataa-aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  ||||||||  || ||||||||||||||||||| ||| | |||||||||||||||||    
T  132016 tcatcaacatattagcagcggattaaattcttcatcataattagacttggcacgcaggcctcatcaaaat-atctcataaattcagtt 132102  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 3964 - 3830
Alignment:
Q  139 aaaaatcttaaaaca-gataattaactaattatccttca----------tcaacataatagcagcggaattaattcaacatcata---aaagtcttggca 224  Q
    ||||||||||||||| |||||||||||||||||||||||          |||||||| |||||||||| | |||||  |||||||   ||| ||||||||    
T  3964 aaaaatcttaaaacaagataattaactaattatccttcaacataaatcatcaacatattagcagcggattaaattcttcatcataaataaaatcttggca 3865  T
Q  225 cgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||| | | | |||||||||||||||||    
T  3864 cgcaggcctcatcataat-atctcataaattcagtt 3830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 8524 - 8390
Alignment:
Q  139 aaaaatcttaaaaca-gataattaactaattatccttca----------tcaacataatagcagcggaattaattcaacatcata---aaagtcttggca 224  Q
    ||||||||||||||| |||||||||||||||||||||||          |||||||| |||||||||| | |||||  |||||||   ||| ||||||||    
T  8524 aaaaatcttaaaacaagataattaactaattatccttcaacataaatcatcaacatattagcagcggattaaattcttcatcataaataaaatcttggca 8425  T
Q  225 cgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||| | | | |||||||||||||||||    
T  8424 cgcaggcctcatcataat-atctcataaattcagtt 8390  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 31468 - 31574
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaa 272  Q
    |||||||| ||||||||||||| | |||||  || |||| |  ||||||||||||||||||||||||| |  |||||||| ||||||| || | ||| ||    
T  31468 tcatcaacgtaatagcagcggattaaattcttcaacatatattgtcttggcacgcaggcctcataaaaattgtctcataagttcagttaaagaacataaa 31567  T
Q  273 aacatag 279  Q
    |||||||    
T  31568 aacatag 31574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 31869 - 31926
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaatagcatgaaa 273  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||| || | |||||||    
T  31869 gtcttggcatgcaggcctcatgaaaatcatctcataaattcagttaaacaacatgaaa 31926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 4909 - 4975
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  4909 gcagcggatttaattcaacatcataaaatagtcttggcacgtaggcctcatcaaa-acatctcataaa 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 23209 - 23094
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagt 217  Q
    |||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||| ||||||| |||||  ||||||||| ||    
T  23209 ggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaaca-aacagcagcagaattaaattcaaatcatcataaa-gt 23113  T
Q  218 cttggcacgcaggcctcat 236  Q
    |||||||||||||||||||    
T  23112 cttggcacgcaggcctcat 23094  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 65846 - 65934
Alignment:
Q  173 ttcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||| ||| ||||||||||||| | |||||  || ||||||  |||||||||| |||||||| ||||| ||||||||||| |||||||    
T  65846 ttcatgaacgtaatagcagcggattaaattcttcaacataaattgtcttggcactcaggcctcgtaaaaatcatctcataagttcagtt 65934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 65762 - 65814
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaa 150  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||    
T  65762 atcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcttaaa 65814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 104463 - 104415
Alignment:
Q  189 cagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  104463 cagcggaattaatttaacatcataaatagtcttggcacgaaggcctcat 104415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 9717 - 9783
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||||| |||||| ||||||||||| |||||| ||||| |||||||||||||  ||||||||||||    
T  9717 gcagcggatttaatttaacatcataaatagtctttgcacgaaggcctcataaaa-acatctcataaat 9783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 1871 - 1798
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| | | |||| |||||||||  |||||||||||||||||||||| |||  ||||||||||||||||||    
T  1871 gcagcggattaagttcatcatcataaataagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 1798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 3035 - 3081
Alignment:
Q  213 aaagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  3035 aaagtcttggcacgcaggcctcatcaaaat-atctcataaattcagtt 3081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 10825 - 10752
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||||||| | | |||| |||||||||  |||||||||||||||||||||| |||  ||||||||||||||||||    
T  10825 gcagcggattaagttcatcatcataaataagtcttggcacgcaggcctcatcaaa-acatctcataaattcagtt 10752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 47296 - 47384
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaa-gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||||| ||||||||||||| | || ||  || ||||||  ||||||||||||||||||||| |||  || ||||||||||||||||||    
T  47296 tcatcaacgtaatagcagcggattaaaatcttcaacataaattgtcttggcacgcaggcctcatcaaa--cacctcataaattcagttcaa 47384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 52972 - 52922
Alignment:
Q  188 gcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcat 236  Q
    |||||||| |||||||||| |||||||  ||||||||||||||||||||||    
T  52972 gcagcggatttaattcaacgtcataaataagtcttggcacgcaggcctcat 52922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 193779 - 193728
Alignment:
Q  187 agcagcggaattaa-ttcaacatcat-aaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  193779 agcagcggaattaaattcaacattattaaaagtcttggcacgcaggcctcat 193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 126107 - 126173
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||||| |||||| ||||||||||| |||||||||||| ||||||||| |||  ||||||||||||    
T  126107 gcagcggatttaatttaacatcataaatagtcttggcacgaaggcctcatcaaa-acatctcataaat 126173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 1398 - 1487
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    ||||||||||| |||||||||| | ||||   || |||||| |||||||||||||||||||||| |||   |||||||||| |||||||||    
T  1398 tcatcaacatattagcagcggattaaatttttcaacataaatagtcttggcacgcaggcctcatcaaaaatatctcataaa-tcagttcaa 1487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 5815 - 5904
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    ||||||||||| |||||||||| | ||||   || |||||| |||||||||||||||||||||| |||   |||||||||| |||||||||    
T  5815 tcatcaacatattagcagcggattaaatttttcaacataaatagtcttggcacgcaggcctcatcaaaaatatctcataaa-tcagttcaa 5904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7050 - 6985
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaa 253  Q
    |||||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  |||||||||||    
T  7050 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcatcaaa-acatctcataaa 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 21273 - 21324
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    |||||||||||||||  |||||| ||||||||||||||||| ||||||| ||||    
T  21273 ggatatcacacttct--aaaatcataaaacagataattaacaaattatctttca 21324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 21375 - 21421
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||||    
T  21375 aagtattggcacgcaggccgcataaaaaccatctcataaattcagtt 21421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 16968 - 17057
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaaagt-cttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    |||||||| ||||||||||||| | |||||  || ||||||  | ||||||||||||||||||| |||  || ||||||||||||||||||    
T  16968 tcatcaacgtaatagcagcggactaaattcttcaacataaattttcttggcacgcaggcctcatcaaa-acacctcataaattcagttcaa 17057  T

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Target: scaffold0100; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 16883 - 16935
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaa 150  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||    
T  16883 atcagagtaaaacatcacataaacaggatatcacacttcttaaaaatcttaaa 16935  T

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Target: scaffold0100; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 24713 - 24626
Alignment:
Q  174 tcatcaacataatagcagcggaattaattcaacatcataaa--agtcttggcacgcaggcctcataaaagtcatctcataaattcagtt 260  Q
    ||||||||||| |||||||||| | |||||  || ||||||  |||||||||||| |||||| || |||  ||||||||||||||||||    
T  24713 tcatcaacatattagcagcggattaaattcttcaacataaataagtcttggcacgtaggccttatcaaaa-catctcataaattcagtt 24626  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 17995 - 17957
Alignment:
Q  214 aagtcttggcacgcaggcctcataaaagtcatctcataa 252  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  17995 aagtcttggcacgcaggcctcataaaaaccatctcataa 17957  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 68260 - 68333
Alignment:
Q  100 atcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||||  | ||  |||||||||||||| |||||||| ||||  || ||||||||||||||||    
T  68260 atcagagtaaaacatcacataaacgggatatcacacttcataaaaatcataaatgaggtaattaactaattatc 68333  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 42979 - 43042
Alignment:
Q  190 agcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  ||||||||||||    
T  42979 agcggatttaattcaacaacataaatagtcttggcacgaaggcctcattaaa--catctcataaat 43042  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 76699 - 76762
Alignment:
Q  190 agcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||| ||||||||||| |||||| |||||||||||| ||||||||| |||  ||||||||||||    
T  76699 agcggatttaattcaacaacataaatagtcttggcacgaaggcctcattaaa--catctcataaat 76762  T

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Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 73192 - 73257
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcataaaagtcatctcataaat 254  Q
    |||||||| |||||| |||| |||||| |||||||||||| ||||||||| |||  ||||||||||||    
T  73192 gcagcggatttaattaaacaacataaatagtcttggcacgaaggcctcatcaaa--catctcataaat 73257  T

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Target: scaffold0863 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 460 - 509
Alignment:
Q  128 tcacacttcttaaaaatcttaaa-acagataattaactaattatccttca 176  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||    
T  460 tcacacttcttaaaaatcttaaacggatataattaactaattatccttca 509  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 2883 - 2842
Alignment:
Q  130 acacttcttaaaaatcttaaaacagataattaactaattatc 171  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  2883 acacttcttaaaaatcataaatgagataattaactaattatc 2842  T

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Target: scaffold0216 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 17970 - 17891
Alignment:
Q  123 ggatatcacacttcttaaaaatcttaa-aac--agataattaactaattatccttcatcaacataatagcagcggaattaa 200  Q
    |||||||||| |||||||||||||||| |||  |||||| |||  | |||||||||||||||  |||||||||||||||||    
T  17970 ggatatcaca-ttcttaaaaatcttaataacgtagataaataataatttatccttcatcaaccaaatagcagcggaattaa 17891  T

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Target: scaffold0104 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 13359 - 13408
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  13359 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 13408  T

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Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 15777 - 15826
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  15777 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 15826  T

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Target: scaffold0104; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 17797 - 17846
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||    
T  17797 gcagcggatttaattcaacaacataaatagtcttggcacgaaggcctcat 17846  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 67181 - 67110
Alignment:
Q  167 ttatccttcatcaacataatagcagcggaattaa-ttcaa--catcataaaagtcttggcacgcaggcctcat 236  Q
    |||||||||||||||  ||||||||||||| ||| ||| |  ||||||||| |||||||||||||||||||||    
T  67181 ttatccttcatcaaccaaatagcagcggaaataaattctaatcatcataaa-gtcttggcacgcaggcctcat 67110  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 266736 - 266785
Alignment:
Q  188 gcagcggaattaattcaacatcataaa-agtcttggcacgcaggcctcat 236  Q
    |||||||| |||||||||||||||||| | |||||||||| |||||||||    
T  266736 gcagcggatttaattcaacatcataaataatcttggcacgaaggcctcat 266785  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 36566 - 36644
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    ||||||||||||||||||  | ||  ||||||||||||||||||||||| | ||| |||||| |||| | ||||||||||    
T  36566 tatcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcat-aaatagataaataacaatttatccttca 36644  T

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Target: scaffold0130 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 27220 - 27265
Alignment:
Q  216 gtcttggcacgcaggcctcataaaagtcatctcataaattcagttcaa 263  Q
    ||||||||||||||||||||| |||  || ||||||||||||||||||    
T  27220 gtcttggcacgcaggcctcatcaaa--cacctcataaattcagttcaa 27265  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 78246 - 78168
Alignment:
Q  99 tatcagagtaaaacatca--tgaaacggatatcacacttcttaaaaatcttaaaacagataattaactaattatccttca 176  Q
    ||||||||||||||||||  | ||  ||||||||||||||||||||||| | ||| |||||| |||| | ||||||||||    
T  78246 tatcagagtaaaacatcacataaacgggatatcacacttcttaaaaatcat-aaatagataaataacaatttatccttca 78168  T

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