View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5761_low_5 (Length: 563)
Name: NF5761_low_5
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5761_low_5 |
 | |
|
| [»] scaffold0287 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 494; Significance: 0; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 1 - 544
Target Start/End: Original strand, 3619070 - 3619619
Alignment:
| Q |
1 |
cagcgcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3619070 |
cagcgcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaac |
3619169 |
T |
|
| Q |
101 |
aacatagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatatcata |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3619170 |
aacatagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatatcata |
3619269 |
T |
|
| Q |
201 |
tgttatggaaatactatttgtttcatgtaatatacttattgttttggtaagtttatttgtgtatcatcttctacgtatcatatatatttatcagtaatgc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
3619270 |
tgttatggaaatactatttgtttcatgtaatatacttattgttttggtaagtttatttgtatatcatcttttatgtatcatatatatttatcagtaatgc |
3619369 |
T |
|
| Q |
301 |
atctaaaaacttaaatcacaagcaagcagacacggtgtttatatcaatctctgatacaaatattacataaacccttatacataaagaaaaacaagc--at |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
3619370 |
atctaaaaacttaaatcacaagcaagcagacacggtgtttatatcaatctctgatacaaatattgcataaaccattatacataaagaaaaacaagcatat |
3619469 |
T |
|
| Q |
399 |
acctccacactgtaattacctacaacatcaatgtatagaacctag----attaagcaacttgcataccagcgtatactaaaaactgtcgattacgacatt |
494 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3619470 |
acctccacactgtaattacctacaacatcaatgtatagaatctagattaattaagcaacttgcataccagcgtatactaaaaactgtcgattgcgacatt |
3619569 |
T |
|
| Q |
495 |
tacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctagc |
544 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3619570 |
tacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctagc |
3619619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 29116256 - 29116447
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
||||| |||||||||||||| |||| |||||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29116256 |
gcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaacaaca |
29116355 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
29116356 |
tagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgatat |
29116447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 29073148 - 29073339
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
||||| |||||||||||||| |||| |||||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29073148 |
gcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaacaaca |
29073247 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
29073248 |
tagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtccgatgcttgatat |
29073339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 29102111 - 29102302
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
||||| |||||||| ||||| |||| |||||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29102111 |
gcgaacggaagaagcgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaacaaca |
29102210 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
29102211 |
tagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgatat |
29102302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 3617574 - 3617388
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
||||||| |||||| || |||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| | |
|
|
| T |
3617574 |
aatggaaaaagtgtagtggccacggtggttgatgagtgtgactctacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaacaacattg |
3617475 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgat |
194 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
3617474 |
ttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagatattacatggtcagatgcttgat |
3617388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 29071495 - 29071309
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
|||||||||||||| || ||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |
|
|
| T |
29071495 |
aatggaagaagtgtagtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgattaccaacctccttgtccaaacaacattg |
29071396 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgat |
194 |
Q |
| |
|
||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||| | || ||||||||||| |||||||||| |
|
|
| T |
29071395 |
ttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttgat |
29071309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 29058267 - 29058081
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
||||||| |||||| || |||||||| ||||||||||| ||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||| | |
|
|
| T |
29058267 |
aatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattatcaacctccttgcccaaacaacattg |
29058168 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgat |
194 |
Q |
| |
|
||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||| | || ||||||||||| |||||||||| |
|
|
| T |
29058167 |
ttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttgat |
29058081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 28956876 - 28957067
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||||||||||||| ||||| || | |||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
28956876 |
gcgaatgggaaaagtgtggtggccatggttgttgatgagtgtgactccacaaagggatgtgatgaagaacatgattaccaacctccttgtccaaacaaca |
28956975 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
| |||||||| || || ||||||||| |||| || | ||| ||||| |||||||||||||| | || ||||||||||| |||||||||||| |
|
|
| T |
28956976 |
ttgttgatgcttccaaggctgtgtgggaagctttaggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttgatat |
28957067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 29069036 - 29068845
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
|||||||||| ||||||||| |||| ||||||||||||||| ||||| | | |||||||||| || ||||||||||||||||||||||| || |||| |
|
|
| T |
29069036 |
gcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattaccaacctccttgtccaaataaca |
29068937 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
| |||||||| || || |||||||||||||| || |||| ||| | || ||||||||||| | || ||||||||||| |||||||||||| |
|
|
| T |
29068936 |
ttgttgatgcttccaaggctgtgtggaaagctttaaatgtgcctaaagagcaatggggtggccttgacattacatggtcagatgcttgatat |
29068845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 29098390 - 29098499
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
||||||||||||||||| |||| ||| || |||||| | |||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
29098390 |
aatggaagaagtgtggtggccatggtagtcgatgagcgtgactctacaatgagatgtgataaagatcatgattaccaacctccttgtcgcaacaacatag |
29098489 |
T |
|
| Q |
108 |
ttgatgcctc |
117 |
Q |
| |
|
|||||||||| |
|
|
| T |
29098490 |
ttgatgcctc |
29098499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 29110979 - 29110786
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
|||||||||| ||| || |||| ||||||||| |||||||| |||| | |||||||||| || | ||||| |||||||| || ||| |||||||| | |
|
|
| T |
29110979 |
aatggaagaaatgtcgtggccatggttgttgacgagtgcgattctagaaagggatgtgatgaacagcatgactaccaaccaccgtgtccaaacaacattg |
29110880 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatatcatat |
201 |
Q |
| |
|
||||||| || ||||||||||||||||| || | ||| ||| | || ||||||||||| | |||||||||||||| |||||||||||| |||| |
|
|
| T |
29110879 |
ttgatgcttccaaagctgtgtggaaagctttaggtgtgcctaaagaacaatggggtggtcttgatattacatggtcagatgcttgatattatat |
29110786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 29078228 - 29078043
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
|||||||||| ||| || |||| |||||| || |||||||| |||| | |||||||||| || | ||||| |||||||| ||||||| |||||||| | |
|
|
| T |
29078228 |
aatggaagaaatgtcgtggccatggttgtcgacgagtgcgattctagaaagggatgtgatgaacagcatgactaccaaccaccttgtacaaacaacattg |
29078129 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttga |
193 |
Q |
| |
|
||||||| || ||||||||||||||||| || | ||| ||| | || ||||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
29078128 |
ttgatgcttccaaagctgtgtggaaagctttaggtgtgcctaaagaacaatggggtggccttgacattacatggtcagatgcttga |
29078043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 3629940 - 3629994
Alignment:
| Q |
489 |
gacatttacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctag |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3629940 |
gacatttacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctag |
3629994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 29066831 - 29067009
Alignment:
| Q |
16 |
aagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatagttgatgcc |
115 |
Q |
| |
|
|||||||||||| | ||| |||||||| || ||||| | | ||| |||||| ||||||||| || |||||||| ||| ||| ||||| |||||||| |
|
|
| T |
29066831 |
aagtgtggttgcaatggtagttgatgaatgtgactcatcaaaggggtgtgatgcagaacatgagtatcaacctccatgtgccaataacattgttgatgct |
29066930 |
T |
|
| Q |
116 |
tctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgat |
194 |
Q |
| |
|
|| | ||||||||||||||||| | ||| || ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29066931 |
tcaatggctgtgtggaaagccttaggtgtcccaaggaatcaatggggtgggttggatattacatggtctgatgcttgat |
29067009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 11850020 - 11849829
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
||||| |||||||||||||| |||| |||||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11850020 |
gcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaacaaca |
11849921 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11849920 |
tagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgatat |
11849829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 11851677 - 11851863
Alignment:
| Q |
8 |
aatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaacatag |
107 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |
|
|
| T |
11851677 |
aatggaagaagtgtggtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgattaccaacctccttgtccaaacaacattg |
11851776 |
T |
|
| Q |
108 |
ttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgat |
194 |
Q |
| |
|
||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||| | || ||||||||||| |||||||||| |
|
|
| T |
11851777 |
ttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttgat |
11851863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 11854388 - 11854579
Alignment:
| Q |
5 |
gcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaacaacaaca |
104 |
Q |
| |
|
|||||||||| ||||||||| |||| ||||||||||||||| ||||| | | |||||||||| || ||||||||||||||||||||||| || |||| |
|
|
| T |
11854388 |
gcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattaccaacctccttgtccaaataaca |
11854487 |
T |
|
| Q |
105 |
tagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttgatat |
196 |
Q |
| |
|
| |||||||| || || |||||||||||||| || |||| ||| | || ||||||||||| | || ||||||||||| |||||||||||| |
|
|
| T |
11854488 |
ttgttgatgcttccaaggctgtgtggaaagctttaaatgtgcctaaagagcaatggggtggccttgacattacatggtcagatgcttgatat |
11854579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0287 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0287
Description:
Target: scaffold0287; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 16145 - 16091
Alignment:
| Q |
489 |
gacatttacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctag |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16145 |
gacatttacatgtgattcttggcaacaaggcaaaggtgattcttcttgtgtctag |
16091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24241194 - 24241097
Alignment:
| Q |
1 |
cagcgcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctccttgtaaca |
98 |
Q |
| |
|
|||||| ||||| ||||||||||| |||| | ||||||||||||| |||| || |||||||||||| |||| ||||||||||| ||||||||||||| |
|
|
| T |
24241194 |
cagcgccaatggtagaagtgtggtggccatgtttgttgatgagtgtgacttcacaatgggatgtgatgaagagcatgattaccagcctccttgtaaca |
24241097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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