View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5761_low_6 (Length: 543)

Name: NF5761_low_6
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5761_low_6
NF5761_low_6
[»] chr8 (32 HSPs)
chr8 (145-426)||(41063181-41063461)
chr8 (425-527)||(41063500-41063602)
chr8 (149-215)||(5549327-5549393)
chr8 (149-215)||(6266771-6266837)
chr8 (149-215)||(11201732-11201798)
chr8 (152-215)||(14615225-14615288)
chr8 (149-215)||(41396304-41396370)
chr8 (149-215)||(41827104-41827170)
chr8 (150-215)||(22486881-22486945)
chr8 (166-215)||(42935325-42935374)
chr8 (164-215)||(24101298-24101349)
chr8 (149-215)||(7433911-7433977)
chr8 (154-215)||(5913775-5913836)
chr8 (27-79)||(5973367-5973419)
chr8 (149-213)||(15345564-15345628)
chr8 (149-213)||(15434629-15434693)
chr8 (149-213)||(15525933-15525997)
chr8 (13-65)||(41063068-41063120)
chr8 (164-215)||(18654913-18654964)
chr8 (149-215)||(30873735-30873801)
chr8 (149-215)||(44678714-44678780)
chr8 (146-215)||(32924931-32924999)
chr8 (25-81)||(7944770-7944826)
chr8 (167-215)||(40028255-40028303)
chr8 (149-215)||(356945-357011)
chr8 (31-81)||(5721437-5721487)
chr8 (149-215)||(21412948-21413013)
chr8 (149-215)||(21807440-21807505)
chr8 (149-215)||(37255137-37255203)
chr8 (149-215)||(40027110-40027176)
chr8 (166-215)||(31894507-31894556)
chr8 (24-77)||(38009490-38009543)
[»] chr6 (13 HSPs)
chr6 (149-215)||(34178905-34178971)
chr6 (149-215)||(26554769-26554835)
chr6 (149-215)||(4165606-4165672)
chr6 (154-215)||(22987729-22987790)
chr6 (154-215)||(23800604-23800665)
chr6 (25-77)||(4036792-4036844)
chr6 (149-215)||(2702541-2702607)
chr6 (149-215)||(17556678-17556744)
chr6 (25-79)||(20611510-20611564)
chr6 (149-215)||(21036555-21036620)
chr6 (146-215)||(12800645-12800714)
chr6 (146-215)||(32896646-32896714)
chr6 (149-215)||(29034021-29034086)
[»] chr4 (42 HSPs)
chr4 (149-215)||(35667106-35667172)
chr4 (149-215)||(21808258-21808324)
chr4 (149-215)||(39809170-39809236)
chr4 (149-215)||(40730762-40730828)
chr4 (149-215)||(50097900-50097966)
chr4 (149-215)||(53725354-53725420)
chr4 (149-215)||(56263958-56264024)
chr4 (149-215)||(1138548-1138614)
chr4 (149-215)||(19521316-19521382)
chr4 (149-215)||(19823166-19823232)
chr4 (149-215)||(24678762-24678828)
chr4 (149-215)||(34436393-34436459)
chr4 (149-215)||(36693688-36693754)
chr4 (149-215)||(48153206-48153272)
chr4 (149-215)||(54093541-54093607)
chr4 (167-215)||(15194997-15195045)
chr4 (149-215)||(400909-400975)
chr4 (149-211)||(6366821-6366883)
chr4 (149-215)||(13562953-13563019)
chr4 (149-215)||(16623973-16624039)
chr4 (149-215)||(18861193-18861259)
chr4 (149-215)||(35393247-35393313)
chr4 (149-215)||(41855881-41855947)
chr4 (149-215)||(41882708-41882774)
chr4 (155-215)||(4709716-4709776)
chr4 (164-216)||(6642844-6642896)
chr4 (151-215)||(26706457-26706521)
chr4 (155-215)||(51435134-51435194)
chr4 (24-71)||(30507328-30507375)
chr4 (149-215)||(31616066-31616132)
chr4 (149-203)||(56112619-56112672)
chr4 (146-215)||(8906627-8906696)
chr4 (24-65)||(22076993-22077034)
chr4 (146-215)||(42586945-42587014)
chr4 (252-300)||(1026028-1026076)
chr4 (23-81)||(24404203-24404260)
chr4 (149-215)||(39239977-39240043)
chr4 (146-200)||(41467634-41467688)
chr4 (149-215)||(49481199-49481265)
chr4 (149-215)||(53925842-53925908)
chr4 (146-215)||(19474210-19474277)
chr4 (29-77)||(17353615-17353663)
[»] chr3 (32 HSPs)
chr3 (149-215)||(33215882-33215948)
chr3 (149-215)||(1695481-1695547)
chr3 (149-215)||(7400195-7400261)
chr3 (149-215)||(7909709-7909775)
chr3 (149-215)||(10804081-10804147)
chr3 (146-215)||(28971008-28971077)
chr3 (149-215)||(10268319-10268385)
chr3 (149-215)||(27182258-27182324)
chr3 (149-215)||(31411683-31411749)
chr3 (149-215)||(33912155-33912221)
chr3 (149-215)||(50155094-50155160)
chr3 (149-215)||(55424207-55424273)
chr3 (149-215)||(1459835-1459901)
chr3 (149-215)||(1843038-1843104)
chr3 (149-215)||(3974285-3974351)
chr3 (149-215)||(3995526-3995592)
chr3 (149-215)||(15489562-15489628)
chr3 (149-215)||(48912847-48912913)
chr3 (146-215)||(54312916-54312984)
chr3 (152-215)||(39094806-39094869)
chr3 (25-67)||(8420133-8420175)
chr3 (149-215)||(28815681-28815747)
chr3 (149-215)||(29522356-29522422)
chr3 (149-215)||(51744633-51744698)
chr3 (146-215)||(12769111-12769179)
chr3 (24-81)||(23641467-23641524)
chr3 (146-215)||(41208929-41208997)
chr3 (31-79)||(6937594-6937642)
chr3 (149-201)||(17518093-17518145)
chr3 (151-215)||(44310755-44310819)
chr3 (164-215)||(51884866-51884917)
chr3 (149-215)||(35603386-35603452)
[»] chr2 (34 HSPs)
chr2 (149-215)||(30015776-30015842)
chr2 (149-215)||(36240309-36240375)
chr2 (149-215)||(13248206-13248272)
chr2 (149-215)||(27496381-27496447)
chr2 (148-215)||(37208470-37208537)
chr2 (149-215)||(2649631-2649697)
chr2 (149-215)||(10261752-10261818)
chr2 (149-215)||(18257560-18257626)
chr2 (149-215)||(25868474-25868540)
chr2 (149-215)||(34314236-34314302)
chr2 (149-215)||(45517662-45517728)
chr2 (146-215)||(10821802-10821870)
chr2 (146-215)||(31617617-31617685)
chr2 (149-215)||(9438823-9438888)
chr2 (149-215)||(13312026-13312091)
chr2 (149-215)||(31743378-31743444)
chr2 (149-215)||(41644790-41644856)
chr2 (146-215)||(19944337-19944406)
chr2 (16-81)||(21190930-21190995)
chr2 (22-81)||(30175522-30175581)
chr2 (149-215)||(20931389-20931455)
chr2 (149-215)||(27553915-27553980)
chr2 (27-81)||(28425884-28425938)
chr2 (149-215)||(38961788-38961854)
chr2 (24-81)||(21666037-21666094)
chr2 (167-215)||(2558134-2558182)
chr2 (29-81)||(45156351-45156403)
chr2 (149-215)||(1002048-1002114)
chr2 (239-301)||(20070372-20070433)
chr2 (149-215)||(26984012-26984078)
chr2 (169-215)||(28223431-28223477)
chr2 (25-71)||(37182379-37182425)
chr2 (24-77)||(42027115-42027168)
chr2 (149-213)||(12017053-12017117)
[»] chr7 (23 HSPs)
chr7 (149-215)||(32796214-32796280)
chr7 (149-215)||(37471069-37471135)
chr7 (149-213)||(33589845-33589909)
chr7 (149-215)||(3699882-3699948)
chr7 (149-215)||(24764692-24764758)
chr7 (149-215)||(36992667-36992733)
chr7 (146-215)||(15456793-15456861)
chr7 (146-215)||(40073854-40073922)
chr7 (164-215)||(34185837-34185888)
chr7 (164-215)||(34202215-34202266)
chr7 (169-215)||(555318-555364)
chr7 (149-215)||(5216194-5216260)
chr7 (149-215)||(9696576-9696642)
chr7 (149-215)||(29508475-29508541)
chr7 (149-215)||(17196029-17196094)
chr7 (149-215)||(18833784-18833850)
chr7 (149-215)||(33626480-33626546)
chr7 (25-81)||(7398162-7398218)
chr7 (155-215)||(40683063-40683123)
chr7 (149-215)||(8614253-8614319)
chr7 (146-215)||(22791348-22791416)
chr7 (146-215)||(42977222-42977290)
chr7 (146-182)||(2370338-2370374)
[»] chr5 (31 HSPs)
chr5 (149-215)||(2465859-2465925)
chr5 (149-215)||(6286603-6286669)
chr5 (149-215)||(17016946-17017012)
chr5 (149-215)||(20123204-20123270)
chr5 (149-215)||(26263937-26264003)
chr5 (149-215)||(39089426-39089492)
chr5 (151-215)||(15421484-15421548)
chr5 (149-215)||(8506152-8506218)
chr5 (149-215)||(16654405-16654471)
chr5 (149-215)||(27344808-27344874)
chr5 (149-215)||(36682316-36682382)
chr5 (149-215)||(43320073-43320139)
chr5 (149-215)||(14505446-14505512)
chr5 (149-215)||(26507737-26507803)
chr5 (154-215)||(5495159-5495220)
chr5 (146-215)||(41202855-41202923)
chr5 (152-215)||(7073548-7073611)
chr5 (148-199)||(31877584-31877635)
chr5 (149-215)||(1840125-1840191)
chr5 (149-203)||(2800184-2800238)
chr5 (149-215)||(7826493-7826558)
chr5 (149-215)||(24317034-24317100)
chr5 (149-215)||(39754899-39754965)
chr5 (149-203)||(2806350-2806404)
chr5 (149-215)||(4725685-4725751)
chr5 (149-215)||(19646500-19646566)
chr5 (149-215)||(24566703-24566768)
chr5 (149-215)||(24607738-24607803)
chr5 (149-215)||(28758937-28759003)
chr5 (146-215)||(39049425-39049493)
chr5 (24-80)||(24395450-24395506)
[»] chr1 (30 HSPs)
chr1 (149-215)||(5115404-5115470)
chr1 (149-215)||(23973736-23973802)
chr1 (149-215)||(28199711-28199777)
chr1 (149-215)||(41310081-41310147)
chr1 (149-215)||(48812094-48812160)
chr1 (149-215)||(1858330-1858396)
chr1 (149-215)||(40601288-40601354)
chr1 (149-215)||(44372436-44372502)
chr1 (149-215)||(52928993-52929059)
chr1 (146-215)||(45793619-45793687)
chr1 (164-215)||(19422478-19422529)
chr1 (152-215)||(21720319-21720382)
chr1 (149-215)||(33814479-33814545)
chr1 (149-215)||(33873949-33874015)
chr1 (149-215)||(39995013-39995079)
chr1 (149-215)||(47039954-47040020)
chr1 (149-215)||(50511535-50511601)
chr1 (25-81)||(1633840-1633896)
chr1 (149-215)||(342691-342757)
chr1 (149-215)||(35985023-35985088)
chr1 (149-215)||(38236130-38236196)
chr1 (149-199)||(46869223-46869273)
chr1 (28-81)||(39135066-39135119)
chr1 (174-215)||(45827200-45827241)
chr1 (146-215)||(48605304-48605373)
chr1 (149-215)||(700436-700502)
chr1 (149-215)||(42102665-42102731)
chr1 (149-215)||(44922697-44922763)
chr1 (149-215)||(50863400-50863466)
chr1 (146-215)||(12254747-12254816)
[»] scaffold1318 (1 HSPs)
scaffold1318 (149-215)||(1447-1513)
[»] scaffold0486 (1 HSPs)
scaffold0486 (149-215)||(63-129)
[»] scaffold0171 (1 HSPs)
scaffold0171 (149-215)||(1597-1662)
[»] scaffold0019 (1 HSPs)
scaffold0019 (149-215)||(74434-74500)
[»] scaffold0007 (2 HSPs)
scaffold0007 (149-215)||(231241-231307)
scaffold0007 (149-215)||(56731-56797)
[»] scaffold0036 (1 HSPs)
scaffold0036 (149-215)||(28123-28190)
[»] scaffold0446 (1 HSPs)
scaffold0446 (149-203)||(11485-11538)
[»] scaffold0360 (1 HSPs)
scaffold0360 (149-215)||(12348-12414)
[»] scaffold0664 (1 HSPs)
scaffold0664 (149-201)||(802-854)
[»] scaffold0121 (1 HSPs)
scaffold0121 (149-215)||(11647-11713)


Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 145 - 426
Target Start/End: Original strand, 41063181 - 41063461
Alignment:
Q  145 gatgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatattccgattggtaggaacagtcctgaaaatat 244  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||| ||||||    
T  41063181 gatgtaatttttaataagagccggcccgtttagcctgcaacccgtgtagggccgggctcaggtaatatatttcgactggtaggaacggtcctggaaatat 41063280  T
Q  245 cattcatgaaaataacattttaaataatataatttcttaccttgaaacaaacacactctaagaaattacctgaagcaatttccatttggatgtatgtttc 344  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  41063281 cattcatggaaataacatttcaaataatataatttcttaccttgaaacaaacacactctaag-aattacatgaagcaatgtccatttggatgtatgtttc 41063379  T
Q  345 tcccacctatcataataatttgaatttttctagttacaccatgattttatctagttacattcaaggacacattttaatttaa 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41063380 tcccacctatcataataatttgaatttttctagttacaccatgattttatctagttacattcaaggacacattttaatttaa 41063461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 425 - 527
Target Start/End: Original strand, 41063500 - 41063602
Alignment:
Q  425 aattttcaaaacacccgcaaccgaatcttcttctctataaagtaaattgaatttggggattcaatgattaagattaatagctcatgtcaaagagttataa 524  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41063500 aattttcaaaacaccctcacccgaatcttcttctctataaagtaaattgaatttggggattcaatgattaagattaacagctcatgtcaaagagttataa 41063599  T
Q  525 aac 527  Q
    |||    
T  41063600 aac 41063602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 5549327 - 5549393
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  5549327 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 5549393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 6266771 - 6266837
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  6266771 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 6266837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 11201798 - 11201732
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  11201798 taatttttaatatgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 11201732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 14615288 - 14615225
Alignment:
Q  152 tttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  14615288 tttttaatatgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 14615225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 41396304 - 41396370
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| | |||||||||    
T  41396304 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcggatagtatatt 41396370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 41827170 - 41827104
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  41827170 taatttttaatacgggccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 41827104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 22486945 - 22486881
Alignment:
Q  150 aatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||| ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  22486945 aatttttaataagggccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 22486881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 42935374 - 42935325
Alignment:
Q  166 cggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  42935374 cggcccgtttagcccgcggcccgtgtagggccgggctcaggtagtatatt 42935325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 24101349 - 24101298
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  24101349 gccggcccgtttaacccgcagcccgtgtagggccgggctcgggtagtatatt 24101298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 7433911 - 7433977
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||  ||||||| ||| ||||||||||||||||||| |||||||||||    
T  7433911 taatttttaatacgggccggccgatttagcctgcagcccgtgtagggccgggctcgggtagtatatt 7433977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 5913775 - 5913836
Alignment:
Q  154 tttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||| | |||||||||||| ||||||  | |||||||||||||||||||||||||||||    
T  5913775 tttaatatgggccggcccgttttgcccgcggctcgtgtagggccgggctcaggtagtatatt 5913836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 5973419 - 5973367
Alignment:
Q  27 gaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatggg 79  Q
    ||||||||||| |||||| | |||||||||||||||||||||||| |||||||    
T  5973419 gaccttggggtctgcaaaccgctcaatggagctgggcctccccaaggtatggg 5973367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 15345628 - 15345564
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtata 213  Q
    |||||||||||| | ||||||||||| |||||||  |||||||||||||| |||| |||||||||    
T  15345628 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgagctcgggtagtata 15345564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 15434693 - 15434629
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtata 213  Q
    |||||||||||| | ||||||||||| |||||||  |||||||||||||| |||| |||||||||    
T  15434693 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgagctcgggtagtata 15434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 15525997 - 15525933
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtata 213  Q
    |||||||||||| | ||||||||||| |||||||  |||||||||||||| |||| |||||||||    
T  15525997 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgagctcgggtagtata 15525933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 41063068 - 41063120
Alignment:
Q  13 aatatccatgcccggaccttggggtgtgcaaatcactcaatggagctgggcct 65  Q
    ||||||||||  |||||||||||||||||||| | ||||||||||||||||||    
T  41063068 aatatccatggtcggaccttggggtgtgcaaaccgctcaatggagctgggcct 41063120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 18654913 - 18654964
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  18654913 gccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 18654964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 30873801 - 30873735
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| ||| |||| ||||||||||||||  ||| |||||||||||    
T  30873801 taatttttaatatgggccggcccgttaagctcgcagcccgtgtagggccgaactcgggtagtatatt 30873735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 44678780 - 44678714
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  ||||||||||||||||||  ||||||||||| ||||||| | |||||||||    
T  44678780 taatttttaatacggaccggcccgtttagcccgcggcccgtgtagggtcgggctcggatagtatatt 44678714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 32924999 - 32924931
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | ||||||||||| ||| |||  |||||||||||||| |||| |||||||||||    
T  32924999 atgtaatttttaatacgggccggcccgtt-agctcgcggcccgtgtagggccgagctcgggtagtatatt 32924931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 7944826 - 7944770
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||||||||||||||| |  |||||||| |||||| ||||||| |||||||||    
T  7944826 cggaccttggggtgtgcaaaccgttcaatggaactgggcttccccaaggtatgggcc 7944770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 40028255 - 40028303
Alignment:
Q  167 ggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  40028255 ggcccgtttagcccgcggcccgtgtagggccggactcgggtagtatatt 40028303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 356945 - 357011
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |  |||||||| |||||||  ||||||||||||||||||| ||||| |||||    
T  356945 taatttttaatacgggttggcccgttaagcccgcggcccgtgtagggccgggctcgggtagcatatt 357011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 5721437 - 5721487
Alignment:
Q  31 ttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||||||||| | ||||||||| |||||||||||||| | |||||||    
T  5721437 ttggggtgtgcaaaccgctcaatggaactgggcctccccaaggcatgggcc 5721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 21412948 - 21413013
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | ||||||||||| |||||  ||||||||||| ||||||| |||||||||||    
T  21412948 taatttttaatacgggtcggcccgtttaacccgcggcccgtgtaggg-cgggctcgggtagtatatt 21413013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 21807440 - 21807505
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | ||||||||||| |||||  ||||||||||| ||||||| |||||||||||    
T  21807440 taatttttaatacgggtcggcccgtttaacccgcggcccgtgtaggg-cgggctcgggtagtatatt 21807505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 37255203 - 37255137
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||| |||||||||||||  | ||||||||||||| |||| ||||||||||    
T  37255203 taatttttaatacggaccggtccgtttagcccgcggctcgtgtagggccggactcaagtagtatatt 37255137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 40027176 - 40027110
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||| ||||||| ||||||| |||||||||||||| | ||| ||| |||||||    
T  40027176 taatttttaatacgggccagcccgttaagcccgcgacccgtgtagggccagactcgggtggtatatt 40027110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 31894556 - 31894507
Alignment:
Q  166 cggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||||  ||||| ||||||||| ||| |||||||||||    
T  31894556 cggcccgtttagcccgcggcccgtatagggccggactcgggtagtatatt 31894507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 38009543 - 38009490
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatg 77  Q
    ||||||||||||||||| |||   ||||||||||||| |||||||||| |||||    
T  38009543 ccggaccttggggtgtgtaaagagctcaatggagctgagcctccccaaggtatg 38009490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34178905 - 34178971
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34178905 taatttttaatacgggccggcccgtttagcccgcaacccatgtagggccgggctcaggtagtatatt 34178971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 26554835 - 26554769
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26554835 taatttttaatatgggccggcccgtttagcccgcggcccgtgtagggccgggctcaggtagtatatt 26554769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 4165672 - 4165606
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  4165672 taatttttaatacgggccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 4165606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 22987790 - 22987729
Alignment:
Q  154 tttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||| | ||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  22987790 tttaatacgggccggcccgtttagcccgcagtccgtgtagggccgggctcgggtagtatatt 22987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 23800604 - 23800665
Alignment:
Q  154 tttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||| | ||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  23800604 tttaatacgggccggcccgtttagcccgcagtccgtgtagggccgggctcgggtagtatatt 23800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 4036792 - 4036844
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatg 77  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  4036792 cggaccttggggtgtgcaaaacgctcaatggagttgggcctccccaatgtatg 4036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 2702607 - 2702541
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | || |||||||||||||||   ||||||||||||||||||| |||||||||||    
T  2702607 taatttttaatacgggctggcccgtttagcccgtggcccgtgtagggccgggctcgggtagtatatt 2702541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 17556678 - 17556744
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | |||||||||||||||||  ||||||||||||||||||  |||||||||||    
T  17556678 taatttttaatatgggtcggcccgtttagcccgcggcccgtgtagggccgggcttgggtagtatatt 17556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 20611510 - 20611564
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatggg 79  Q
    ||||||||||||||||||||   ||||||||||||||||||||| || |||||||    
T  20611510 cggaccttggggtgtgcaaagagctcaatggagctgggcctccctaaggtatggg 20611564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 21036555 - 21036620
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| || |||||||||| |||||||  ||||| ||||||||||||| |||||||||||    
T  21036555 taatttttaatatgaaccggcccgttaagcccgcg-cccgtatagggccgggctcgggtagtatatt 21036620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 12800714 - 12800645
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| |  ||||||||||||||||||  ||||||||||| || | || |||||||||||    
T  12800714 atgtaatttttaatacggcccggcccgtttagcccgcggcccgtgtagggtcgcgttcgggtagtatatt 12800645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 32896714 - 32896646
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | |||||||| ||||||||||  || ||||||||||| |||| |||||||||||    
T  32896714 atgtaatttttaatacgggccggccc-tttagcccgcggcctgtgtagggccgagctcgggtagtatatt 32896646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 29034086 - 29034021
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||| ||| |||||||  ||||||||||||||||||| |||| ||||||    
T  29034086 taatttttaatacgggccggccggtt-agcccgcggcccgtgtagggccgggctcgggtaatatatt 29034021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 35667106 - 35667172
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  35667106 taatttttaatacgggccggcccgtttagcccgcgacccgtgtagggccgggctcgggtagtatatt 35667172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 21808258 - 21808324
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  21808258 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 21808324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 39809236 - 39809170
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  39809236 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 39809170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 40730828 - 40730762
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  40730828 taatttttaatatgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 40730762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 50097900 - 50097966
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  50097900 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 50097966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 53725354 - 53725420
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  53725354 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcatgtagtatatt 53725420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 56264024 - 56263958
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  56264024 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 56263958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1138614 - 1138548
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||| |||||||||||||  ||||||||||||||||||| |||||||||||    
T  1138614 taatttttaatacgggccggtccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 1138548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 19521382 - 19521316
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| | |||||||||    
T  19521382 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcggatagtatatt 19521316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 19823232 - 19823166
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  19823232 taatttttaatacgggccgacccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 19823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 24678762 - 24678828
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  24678762 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccaggctcgggtagtatatt 24678828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34436393 - 34436459
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | |||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34436393 taatttttaatacgggtcggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 34436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 36693754 - 36693688
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||| ||||||| |||||||||||    
T  36693754 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggtcgggctcgggtagtatatt 36693688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 48153206 - 48153272
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  48153206 taatttttaatacgggccgccccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 48153272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 54093607 - 54093541
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  54093607 taatttttaatacgggccgacccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 54093541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 15194997 - 15195045
Alignment:
Q  167 ggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  15194997 ggcccgtttagcccgcagcccgtgtagggccgggctcgggtagtatatt 15195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 400975 - 400909
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||| |||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  400975 taatttttaatacgggccagcccgtttagcccgcggcccgtgtagggccggactcgggtagtatatt 400909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 6366821 - 6366883
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagta 211  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||    
T  6366821 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagta 6366883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 13563019 - 13562953
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  13563019 taatttttaatacggaccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 13562953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 16623973 - 16624039
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||| || |||||||  ||||||||||||||||||| |||||||||||    
T  16623973 taatttttaatacgggccggcccattaagcccgcggcccgtgtagggccgggctcgggtagtatatt 16624039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 18861259 - 18861193
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||  |  ||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  18861259 taatttttaatctggaccggcccgtttagcccgcggcccgtgtagggccggactcaggtagtatatt 18861193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 35393247 - 35393313
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   ||||| |||||||||||||  ||||||||||||||||||| |||||||||||    
T  35393247 taatttttaatacaggccggtccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 35393313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 41855881 - 41855947
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||| | |||||||||||||||    
T  41855881 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccagactcaggtagtatatt 41855947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 41882774 - 41882708
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||   |||||||||||||||||| |||||||||||    
T  41882774 taatttttaatacgggccggcccgttaagcccgcggtccgtgtagggccgggctcgggtagtatatt 41882708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 4709716 - 4709776
Alignment:
Q  155 ttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||| | ||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  4709716 ttaatacgggccggccagtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 4709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 6642896 - 6642844
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatattc 216  Q
    |||||||||||||||||||  |||||||||||| |||||| ||||||||||||    
T  6642896 gccggcccgtttagcccgcggcccgtgtagggctgggctcgggtagtatattc 6642844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 26706521 - 26706457
Alignment:
Q  151 atttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | |||||||||||||||||  |||||||||||||| ||| ||||||||||||    
T  26706521 atttttaatacgggtcggcccgtttagcccgcggcccgtgtagggccgagcttaggtagtatatt 26706457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 51435194 - 51435134
Alignment:
Q  155 ttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||| | |||||||||||||||||||  |||||||||||||| |||| |||||||||||    
T  51435194 ttaatacgggccggcccgtttagcccgcggcccgtgtagggccgagctcgggtagtatatt 51435134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 30507375 - 30507328
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaa 71  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||    
T  30507375 ccggaccttggggtgtgcaaaccactcaatggaattgggcctccccaa 30507328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 31616132 - 31616066
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||| || |||  ||||||||||||||||||  |||||||||||    
T  31616132 taatttttaatacgggccggcccgtttggctcgcggcccgtgtagggccgggcttgggtagtatatt 31616066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 56112672 - 56112619
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctc 203  Q
    |||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  56112672 taatttttaatacgggccggcccgtt-agcccgcgacccgtgtagggccgggctc 56112619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 8906696 - 8906627
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | |||||||||| ||||||||  |||||||| | |||||||| | |||||||||    
T  8906696 atgtaatttttaatacgggccggcccgtctagcccgcggcccgtgtaagaccgggctcggatagtatatt 8906627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 22076993 - 22077034
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcct 65  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  22076993 ccggaccttggggtgtgcaaaccgctcaatggagctgggcct 22077034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 42587014 - 42586945
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | |||||||| ||| ||||||   || ||||||||||||||| |||||||||||    
T  42587014 atgtaatttttaatacgggccggcccattttgcccgcggtccatgtagggccgggctcgggtagtatatt 42586945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 1026076 - 1026028
Alignment:
Q  252 gaaaataacattttaaataatataatttcttaccttgaaacaaacacac 300  Q
    ||||||| ||||||||  ||| |||||||||||||||||||||||||||    
T  1026076 gaaaatatcattttaagcaatgtaatttcttaccttgaaacaaacacac 1026028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 24404203 - 24404260
Alignment:
Q  23 cccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    ||||| |||||||| |||||||   |||||||||||||||||||||||| |||||||||    
T  24404203 cccggtccttgggg-gtgcaaacagctcaatggagctgggcctccccaaggtatgggcc 24404260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 39240043 - 39239977
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||| |||||  |||||||||| |||  ||| |||||||||||    
T  39240043 taatttttaatacgggccggcccgtttaacccgcggcccgtgtaggaccgaactcgggtagtatatt 39239977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 41467634 - 41467688
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccggg 200  Q
    ||||||||||||||| | |||| |||||||||||||  |||||||||||| ||||    
T  41467634 atgtaatttttaatacgggccgacccgtttagcccgtgacccgtgtagggtcggg 41467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 49481199 - 49481265
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||| |||||| | |||| |||||||||||| |  ||||| ||||||||| |||||||||||||||    
T  49481199 taattgttaatacgggccgacccgtttagcccacggcccgtatagggccggactcaggtagtatatt 49481265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 53925842 - 53925908
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| || ||||| |||||| |||||||||||||||| || | |||||||||    
T  53925842 taatttttaatacgggccgacctgtttaacccgcagcccgtgtagggccgggttcggatagtatatt 53925908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 19474277 - 19474210
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| |  |||||||||| |||||||  |||||||||| |||||||| |||||||||||    
T  19474277 atgtaatttttaatacggaccggcccgtt-agcccgcggcccgtgtagg-ccgggctctggtagtatatt 19474210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 17353615 - 17353663
Alignment:
Q  29 ccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatg 77  Q
    |||||||| |||||||   ||||||||||||| ||||||||||||||||    
T  17353615 ccttggggggtgcaaacagctcaatggagctgagcctccccaatgtatg 17353663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 33215882 - 33215948
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  33215882 taatttttaatacgggccggcccgtttagcccgcgatccgtgtagggccgggctcaggtagtatatt 33215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 1695481 - 1695547
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  1695481 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 1695547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 7400195 - 7400261
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  7400195 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 7400261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 7909775 - 7909709
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  7909775 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 7909709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 10804147 - 10804081
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  10804147 taatttttaatacgggccggctcgtttagcccgcgacccgtgtagggccgggctcgggtagtatatt 10804081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 28971008 - 28971077
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||  |||||||||||    
T  28971008 atgtaatttttaataaaagccagcccgtttagcccgcggcccgtgtagggccgggcttgggtagtatatt 28971077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 10268319 - 10268385
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||| || ||||||||||||  |||||||||||||||||||||||||||||||    
T  10268319 taatttttaatacgggccagcacgtttagcccgcggcccgtgtagggccgggctcaggtagtatatt 10268385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 27182324 - 27182258
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||| | ||||||||||||||||| |||| ||||||    
T  27182324 taatttttaatacgggccggcccgtttagcccgcagctcgtgtagggccgggctcgggtaatatatt 27182258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 31411749 - 31411683
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | || ||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  31411749 taatttttaatacgggcaggcccgtttagcccgcggcccgtgtagggccgggctcaggtagcatatt 31411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 33912155 - 33912221
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| |||||||||||    
T  33912155 taatttttaatacgggccggctcgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 33912221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 50155160 - 50155094
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||| ||||||||||||  ||||||||||||||||||| |||||||||||    
T  50155160 taatttttaatatgggccggctcgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 50155094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 55424207 - 55424273
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  55424207 taatttttaatacgggccgacccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 55424273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1459901 - 1459835
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||| ||||| |||||||  ||||||||||||||||||||||||| |||||    
T  1459901 taatttttaatacgggccggtccgttaagcccgcggcccgtgtagggccgggctcaggtagcatatt 1459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 1843038 - 1843104
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||| |||||  ||||||||||||||| ||| |||||||||||    
T  1843038 taatttttaatacgggccggcccgtttaacccgcggcccgtgtagggccggactcgggtagtatatt 1843104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 3974351 - 3974285
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||| ||  ||||||||||||||||||||| |||||||||    
T  3974351 taatttttaatacgggccggcccgttaagcctgcggcccgtgtagggccgggctcagttagtatatt 3974285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 3995526 - 3995592
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||| ||  ||||||||||||||||||||| |||||||||    
T  3995526 taatttttaatacgggccggcccgttaagcctgcggcccgtgtagggccgggctcagttagtatatt 3995592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 15489562 - 15489628
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | ||| ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  15489562 taatttttaatacgggtcggtccgtttagcccgcgacccgtgtagggtcgggctcgggtagtatatt 15489628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 48912913 - 48912847
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  48912913 taatttttaaaacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 48912847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 54312984 - 54312916
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||| |||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  54312984 atgtgatttttaatacgggccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 54312916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 39094869 - 39094806
Alignment:
Q  152 tttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||| | ||||||||||||| |||||  ||||||||||||||| ||| |||||||||||    
T  39094869 tttttaatacgggccggcccgtttaacccgcggcccgtgtagggccggtctcgggtagtatatt 39094806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 8420133 - 8420175
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctcc 67  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  8420133 cggaccttggggtgtgcaaaccactcaatggaactgggcctcc 8420175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 28815747 - 28815681
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||  ||| ||| |||||||||||    
T  28815747 taatttttaatacgggccggcccgtttagcccgcggcccgtgtaggatcggactcgggtagtatatt 28815681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 29522422 - 29522356
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | || |||||||| |||||||  |||||||||||||||| || |||||||||||    
T  29522422 taatttttaatacgggctggcccgttaagcccgcggcccgtgtagggccgggttcgggtagtatatt 29522356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 51744633 - 51744698
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||||||||| |||||||| |||||||||| |||| |||||||||||||||    
T  51744633 taatttttaatacggaccggcccgtt-agcccgcagcccgtgtaggaccggactcaggtagtatatt 51744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 12769111 - 12769179
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||  | |||||||||||    
T  12769111 atgtaatttttaataagggtcggcccgtt-agcccgcggcccgtgtagggccgggtccgggtagtatatt 12769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 23641524 - 23641467
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||| |||||||||||||| | ||||||||| | |||||||||||| |||||||||    
T  23641524 ccggactttggggtgtgcaaaccgctcaatggaaccgggcctccccaaggtatgggcc 23641467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 41208997 - 41208929
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||   |||| |||||| |||||||  ||||||||||||||||||| |||||||||||    
T  41208997 atgtaatttttaatataggccgacccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 41208929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 6937642 - 6937594
Alignment:
Q  31 ttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatggg 79  Q
    |||||| ||||||||  |||||||||||||||||| |||||||||||||    
T  6937642 ttggggggtgcaaatagctcaatggagctgggccttcccaatgtatggg 6937594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 17518145 - 17518093
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggc 201  Q
    |||||||||||| | |||||||||||||| ||||  |||||||||||||||||    
T  17518145 taatttttaatacgggccggcccgtttagtccgcggcccgtgtagggccgggc 17518093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 44310755 - 44310819
Alignment:
Q  151 atttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| |  ||| |||||| |||||||  ||||||||||||||||||| |||||||||||    
T  44310755 atttttaatacggaccgacccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 44310819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 51884917 - 51884866
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||| |||||||  |||||||| | ||||||||||||||||||||    
T  51884917 gccggcccgttaagcccgcggcccgtgtaagaccgggctcaggtagtatatt 51884866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 35603452 - 35603386
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   ||||||||||| | |||| |  |||||||||||||||||| |||||||||||    
T  35603452 taatttttaatacaggccggcccgttaaacccgtagtccgtgtagggccgggctcgggtagtatatt 35603386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 30015842 - 30015776
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  30015842 taatttttaatacgagccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 30015776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 36240375 - 36240309
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  36240375 taatttttaatacgggccggcccgtttagcccgcagcccgtgtagggccgggctcgggtagtatatt 36240309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 13248206 - 13248272
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  13248206 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 13248272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 27496381 - 27496447
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  27496381 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 27496447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 37208537 - 37208470
Alignment:
Q  148 gtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||| ||||| ||||||| |||||||  |||||||||||||||| ||||||||||||||    
T  37208537 gtaatttttaatacgagccagcccgttaagcccgcggcccgtgtagggccgggttcaggtagtatatt 37208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 2649697 - 2649631
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||  |||||||||||    
T  2649697 taatttttaatatgggccggcccgtttagcccgcggcccgtgtagggccgggcttgggtagtatatt 2649631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 10261752 - 10261818
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||| ||  ||||||||||||||||||| |||||||||||    
T  10261752 taatttttaatacgtgccggcccgtttagcctgcggcccgtgtagggccgggctcgggtagtatatt 10261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 18257626 - 18257560
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | |||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  18257626 taatttttaaaacgggccggcccgtttagcctgcggcccgtgtagggccgggctcaggtagtatatt 18257560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 25868540 - 25868474
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  25868540 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 25868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 34314236 - 34314302
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  | |||||||||||||||||||||||||||||    
T  34314236 taatttttaatacgggccggcccgttaagcccgcggctcgtgtagggccgggctcaggtagtatatt 34314302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 45517662 - 45517728
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||| ||||||| |||||||||||    
T  45517662 taatttttaatatgggccggcccgtttagcccgcggcccgtgtagggtcgggctcgggtagtatatt 45517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 10821870 - 10821802
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||| ||||| ||||| |||||||  ||||||||||||||||||| |||||||||||    
T  10821870 atgtaatttttaataagggccggtccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 10821802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 31617685 - 31617617
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||||||||| |||||| |||||||||||    
T  31617685 atgtaatttttaataagggccggcccgtt-agcccgcggcccgtgtagggctgggctcgggtagtatatt 31617617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 9438888 - 9438823
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  9438888 taatttttaatacgggccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 9438823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 13312026 - 13312091
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  13312026 taatttttaatacgggccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 13312091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 31743378 - 31743444
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  ||||||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  31743378 taatttttaatacggaccggcccgtttagcccgcggcccgtgtagggccggactcgggtagtatatt 31743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 41644790 - 41644856
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||| ||||||    
T  41644790 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtactatatt 41644856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 19944406 - 19944337
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | | |||||||||||| ||||| ||||||||||| ||| ||| |||||||||||    
T  19944406 atgtaatttttaatatgggtcggcccgtttagtccgcagcccgtgtagggtcggcctcgggtagtatatt 19944337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 21190995 - 21190930
Alignment:
Q  16 atccatgcccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    ||||| |||||| |||||||| |||||||   |||||||||||||||||||||||| |||||||||    
T  21190995 atccaggcccggcccttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcc 21190930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 30175522 - 30175581
Alignment:
Q  22 gcccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||| |||||||| |||||||   |||||||||||||||||||||||| |||||||||    
T  30175522 gcccggcccttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcc 30175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 20931455 - 20931389
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||| ||  |||||||||| |||||||| |||||||||||    
T  20931455 taatttttaatacgggccgacccgtttagcctgcggcccgtgtaggaccgggctcgggtagtatatt 20931389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 27553915 - 27553980
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||  |||||||||||    
T  27553915 taatttttaatacgggccggcccgtt-agcccgcggcccgtgtagggccgggcttgggtagtatatt 27553980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 28425938 - 28425884
Alignment:
Q  27 gaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||||||||||||| ||||||||||| |||| || |||||| |||||||||    
T  28425938 gaccttggggtgtgcaaaccactcaatggaactggaccaccccaaggtatgggcc 28425884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 38961854 - 38961788
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||| |||||||||||  |||||||||||||||| || | |||||||||    
T  38961854 taatttttaatacgggccggcctgtttagcccgcggcccgtgtagggccgggttcggatagtatatt 38961788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 21666094 - 21666037
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    ||||||||||||||||||||    ||||||||| |||||||||||||| |||||||||    
T  21666094 ccggaccttggggtgtgcaaggagctcaatggaactgggcctccccaaggtatgggcc 21666037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 2558134 - 2558182
Alignment:
Q  167 ggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||    
T  2558134 ggcccgttaagcccgcagcccgtgtagggccgggctcgagtagtatatt 2558182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 45156403 - 45156351
Alignment:
Q  29 ccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||| |||||||   |||||||||||||||||||||||| |||||||||    
T  45156403 ccttggggggtgcaaacagctcaatggagctgggcctccccaaggtatgggcc 45156351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1002114 - 1002048
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||  | ||| |||||||||||||||  ||||||||||||||| |||  ||||||||||    
T  1002114 taatttttaatccgtgccagcccgtttagcccgcggcccgtgtagggccggactcgagtagtatatt 1002048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 20070433 - 20070372
Alignment:
Q  239 aaatatcattcatgaaaataacattttaaataatataatttcttaccttgaaacaaacacact 301  Q
    ||||||||||| | |||||| ||||| ||  ||| ||||||||||||||||||||||||||||    
T  20070433 aaatatcattcct-aaaatatcatttcaaggaatttaatttcttaccttgaaacaaacacact 20070372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 26984078 - 26984012
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||| ||   |||||||||||||||||| |||| ||||||    
T  26984078 taatttttaatacgggccggcccgttaagcctgcgttccgtgtagggccgggctcgggtattatatt 26984012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 28223431 - 28223477
Alignment:
Q  169 cccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||  |||||||| |||||||||| |||||||||||    
T  28223431 cccgtttagcccgctgcccgtgtacggccgggctcgggtagtatatt 28223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 37182379 - 37182425
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaa 71  Q
    ||||||||||||||||||||   |||||||||||||| |||||||||    
T  37182379 cggaccttggggtgtgcaaagagctcaatggagctggacctccccaa 37182425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 42027115 - 42027168
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatg 77  Q
    ||||||||||||||||| ||| | ||||||||||| | |||||| |||||||||    
T  42027115 ccggaccttggggtgtgtaaaccgctcaatggagccgagcctcctcaatgtatg 42027168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 12017117 - 12017053
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtata 213  Q
    ||||||||| || | ||||||||||| |||||||  |||||||||| |||| ||| |||||||||    
T  12017117 taatttttactacgggccggcccgttaagcccgcggcccgtgtaggaccggactcgggtagtata 12017053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 32796214 - 32796280
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  32796214 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 32796280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 37471135 - 37471069
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  37471135 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 37471069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 33589909 - 33589845
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtata 213  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  33589909 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtata 33589845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 3699882 - 3699948
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||||| ||||| |||||||||||    
T  3699882 taatttttaatacgagccggctcgtttagcccgcggcccgtgtagggccaggctcgggtagtatatt 3699948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 24764692 - 24764758
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  24764692 taatttttaatacaggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 24764758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 36992667 - 36992733
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||| |||||||||| |||||||||||    
T  36992667 taatttttaatacgggccggcccgtttagcccgcggcccgtgtaaggccgggctcgggtagtatatt 36992733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 15456861 - 15456793
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||||| |||||||||| |||||||||||    
T  15456861 atgtaatttttaataagggccggcccgtt-agcccgcggcccgtgtaaggccgggctcgggtagtatatt 15456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 40073922 - 40073854
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||    
T  40073922 atgtaatttttaatatgggccggcccgtt-agcctgcagcccgtgtagggccgggctcgggtagtatatt 40073854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 34185888 - 34185837
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34185888 gccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 34185837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 34202266 - 34202215
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34202266 gccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 34202215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 555364 - 555318
Alignment:
Q  169 cccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  555364 cccgtttagcccgcgacccgtgtagggccgggctcgggtagtatatt 555318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 5216194 - 5216260
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   |||||||||||||||||||  ||||||||||||||||||| |||| ||||||    
T  5216194 taatttttaatacaggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtaatatatt 5216260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 9696642 - 9696576
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  9696642 taatttttaatacggaccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 9696576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 29508475 - 29508541
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | || ||||||||||||||||  |||||||||||||||||||  ||||||||||    
T  29508475 taatttttaatacgggctggcccgtttagcccgcggcccgtgtagggccgggctcgagtagtatatt 29508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 17196029 - 17196094
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||| ||||||||||| |||| ||  || ||||||||||||||| ||||||||||||    
T  17196029 taatttttaataagggccggcccgtt-agccagcggcctgtgtagggccgggctaaggtagtatatt 17196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 18833850 - 18833784
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | ||||||||||| ||||||   ||||||||||||||||||| |||||||||||    
T  18833850 taatttttaaaacgggccggcccgttaagcccgtggcccgtgtagggccgggctcgggtagtatatt 18833784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 33626546 - 33626480
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||| ||||| |||||| ||||    
T  33626546 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccaggctcgggtagtttatt 33626480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 7398162 - 7398218
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||||||||||||||    ||||||||||||| |||||||||| |||||||||    
T  7398162 cggaccttggggtgtgcaacgagctcaatggagctgagcctccccaaggtatgggcc 7398218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 40683123 - 40683063
Alignment:
Q  155 ttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||| | ||| |||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  40683123 ttaatacgggcccgcccgtttagcccgcggcccgtgtagggccggactcgggtagtatatt 40683063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 8614253 - 8614319
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||| |||||||||| ||  ||||||||||||||| ||| |||||||||||    
T  8614253 taatttttaatacggaccggtccgtttagcctgcggcccgtgtagggccggactcgggtagtatatt 8614319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 22791416 - 22791348
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||| |||||||||| | ||||||||||| | |||||| ||||||||| ||||| ||| |||||||||||    
T  22791416 atgttatttttaatacgggccggcccgttaa-cccgcagcccgtgtagagccggactcgggtagtatatt 22791348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 42977222 - 42977290
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | ||||| ||||| | |||||  || |||||||||||||||| |||||||||||    
T  42977222 atgtaatttttaatacgggccggtccgttaa-cccgctgcctgtgtagggccgggctcgggtagtatatt 42977290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 2370374 - 2370338
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgc 182  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  2370374 atgtaatttttaatacgagccgacccgtttagcccgc 2370338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 2465925 - 2465859
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  2465925 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 2465859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 6286603 - 6286669
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  6286603 taatttttaatacgggccggcccgtttagcccgctgcccgtgtagggccgggctcgggtagtatatt 6286669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 17016946 - 17017012
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  17016946 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcaggtagtatatt 17017012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 20123204 - 20123270
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  20123204 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 20123270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 26264003 - 26263937
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  26264003 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 26263937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 39089426 - 39089492
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  39089426 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 39089492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 15421484 - 15421548
Alignment:
Q  151 atttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | ||||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  15421484 atttttaatacgggccggtccgtttagcccgcagcccgtgtagggccgggctcagatagtatatt 15421548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 8506152 - 8506218
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  8506152 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 8506218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 16654405 - 16654471
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||| |||| |||||||||||    
T  16654405 taatttttaatacgaaccggcccgtttagcccgcggcccgtgtagggccgagctcgggtagtatatt 16654471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 27344874 - 27344808
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  27344874 taatttttaatacgggccgacccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 27344808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 36682382 - 36682316
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  36682382 taatttttaatacgggccggcctgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 36682316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 43320139 - 43320073
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  43320139 taatttttaatacgggccggcccgttttgcccgcggcccgtgtagggccgggctcgggtagtatatt 43320073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 14505512 - 14505446
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  14505512 taatttttaatacggaccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 14505446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 26507737 - 26507803
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||||| |||  ||||||||||| ||||||| |||||||||||    
T  26507737 taatttttaatacgggccggcccgtttagctcgcggcccgtgtagggtcgggctcgggtagtatatt 26507803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 5495159 - 5495220
Alignment:
Q  154 tttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||| | |||||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  5495159 tttaatatgggccggcccgtttagcccgcggcccgtgcagggccgggctcgggtagtatatt 5495220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 41202923 - 41202855
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| |  |||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  41202923 atgtaatttttaatacggaccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 41202855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 7073611 - 7073548
Alignment:
Q  152 tttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||| ||| |||||| ||||||||||||||  |||||||||||| |||||| |||||||||||    
T  7073611 ttttttatacgagccgtcccgtttagcccgcggcccgtgtagggctgggctcgggtagtatatt 7073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 31877635 - 31877584
Alignment:
Q  148 gtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgg 199  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||||||||    
T  31877635 gtaatttttaatacgagccggtccgtttagcccgcagtccgtgtagggccgg 31877584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1840191 - 1840125
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |  || |||||||||||||  ||||||||||||||||||| |||||||||||    
T  1840191 taatttttaatacgggttgggccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 1840125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 2800238 - 2800184
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctc 203  Q
    |||||||||||| | |||||||||||||||||||  ||||| |||||||||||||    
T  2800238 taatttttaatacgggccggcccgtttagcccgcggcccgtctagggccgggctc 2800184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 7826558 - 7826493
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||| |||||| |||||||| ||||||||||||||| ||| |||||||||||    
T  7826558 taatttttaatacgggccgacccgttaagcccgcagcccgtgtagggccggtctc-ggtagtatatt 7826493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 24317034 - 24317100
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| ||||| |  |||||||||| |||||||| |||||||||||    
T  24317034 taatttttaatacgggccggcccgttaagcccacggcccgtgtaggcccgggctcgggtagtatatt 24317100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 39754899 - 39754965
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |   ||||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  39754899 taatttttaatacggatcggcccgttaagcccgcgacctgtgtagggccgggctcgggtagtatatt 39754965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 2806404 - 2806350
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctc 203  Q
    |||||||||||| | ||||| |||||||||||||  ||||| |||||||||||||    
T  2806404 taatttttaatacgggccggtccgtttagcccgcggcccgtctagggccgggctc 2806350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 4725685 - 4725751
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | || |||||||| || ||||  ||||||||||||||| ||| |||||||||||    
T  4725685 taatttttaatacgggctggcccgttaagtccgcggcccgtgtagggccggactcgggtagtatatt 4725751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 19646566 - 19646500
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||| || |||||||  ||||| ||||||| ||||| |||||||||||    
T  19646566 taatttttaatacgggccggccctttaagcccgcggcccgtatagggccaggctcgggtagtatatt 19646500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 24566703 - 24566768
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||| ||  || |||||||||||||||| |||||||||||    
T  24566703 taatttttaatacgggccggcccgtt-agcctgcggcctgtgtagggccgggctcgggtagtatatt 24566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 24607738 - 24607803
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||| ||  || |||||||||||||||| |||||||||||    
T  24607738 taatttttaatacgggccggcccgtt-agcctgcggcctgtgtagggccgggctcgggtagtatatt 24607803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 28759003 - 28758937
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||   |  ||||||||||| ||| |||||||||||    
T  28759003 taatttttaatacgggccggcccgtttagcccgcggtcaatgtagggccggactcgggtagtatatt 28758937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 39049425 - 39049493
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| |  |||| ||| || ||||||  ||||||||||||||||||| |||||||||||    
T  39049425 atgtaatttttaatacggaccggtccgctt-gcccgcggcccgtgtagggccgggctcgggtagtatatt 39049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 24395450 - 24395506
Alignment:
Q  24 ccggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggc 80  Q
    ||||||||| ||| |||||||   |||||||||||| ||||||||||| ||||||||    
T  24395450 ccggaccttagggcgtgcaaagagctcaatggagctaggcctccccaaggtatgggc 24395506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 5115404 - 5115470
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  5115404 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 5115470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 23973802 - 23973736
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  23973802 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 23973736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 28199711 - 28199777
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  28199711 taatttttaatacgggccggcccgtttagcccgcgacccgtgtagggtcgggctcgggtagtatatt 28199777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 41310147 - 41310081
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  41310147 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 41310081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 48812160 - 48812094
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  48812160 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 48812094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1858396 - 1858330
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||||| || |||||||||||    
T  1858396 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggttcgggtagtatatt 1858330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 40601354 - 40601288
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||| |||||| |||||||||||    
T  40601354 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggctgggctcgggtagtatatt 40601288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 44372502 - 44372436
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||| |||| ||||||    
T  44372502 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcgggtaatatatt 44372436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 52929059 - 52928993
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   |||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  52929059 taatttttaatactggccggcccgtttagcccgcagcccgtgtagggccgggttcgggtagtatatt 52928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 45793687 - 45793619
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||| ||| |||||||||||    
T  45793687 atgtaatttttaataagagccggcccg-ttagcccgcggcccgtgtagggtcggactcgggtagtatatt 45793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 19422478 - 19422529
Alignment:
Q  164 gccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  19422478 gccggcccgtttagcccgcggcccgtgtagggccgggctcgggtagtatatt 19422529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 21720319 - 21720382
Alignment:
Q  152 tttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||| | ||||||||||| ||||||| ||||| |||||||||| |||||||||||||||    
T  21720319 tttttaatacgggccggcccgttaagcccgcgacccgagtagggccggtctcaggtagtatatt 21720382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 33814545 - 33814479
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||||    
T  33814545 taatttttaacacgggccggcccgttaagcccgcggcccgtgtagggccggactcaggtagtatatt 33814479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 33874015 - 33873949
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||| | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||||    
T  33874015 taatttttaacacgggccggcccgttaagcccgcggcccgtgtagggccggactcaggtagtatatt 33873949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 39995079 - 39995013
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||| ||||||||||||||| || ||||||||    
T  39995079 taatttttaatacgggccggcccgtttagcccgcggcccatgtagggccgggctcgggcagtatatt 39995013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 47040020 - 47039954
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |   ||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  47040020 taatttttaatacggatcggcccgtttagcccgcgatccgtgtagggccgggctcaggtaatatatt 47039954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 50511601 - 50511535
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||| ||| |||||||||||    
T  50511601 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccggactcgggtagtatatt 50511535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1633896 - 1633840
Alignment:
Q  25 cggaccttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    ||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||||    
T  1633896 cggactttggggtgtgcaaatcactcaatgaaactgggcctcctcaaggtatgggcc 1633840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 342757 - 342691
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||| |||||||||||||  ||||||||||||| | ||| |||||||||||    
T  342757 taatttttaatacgggccgggccgtttagcccgcggcccgtgtagggccagactcgggtagtatatt 342691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 35985088 - 35985023
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| |  |||||| ||| |||||||  |||||||||||||||||||||||||||||||    
T  35985088 taatttttaatacggaccggccggtt-agcccgcggcccgtgtagggccgggctcaggtagtatatt 35985023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 38236130 - 38236196
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | | |||||||||||||| ||  |||||||||||||| |||| |||||||||||    
T  38236130 taatttttaatacgggtcggcccgtttagcctgcggcccgtgtagggccgagctcgggtagtatatt 38236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 46869223 - 46869273
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgg 199  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||||    
T  46869223 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgg 46869273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 39135119 - 39135066
Alignment:
Q  28 accttggggtgtgcaaatcactcaatggagctgggcctccccaatgtatgggcc 81  Q
    |||||||||||||||||   ||||||||| |||||||||||||| |||||||||    
T  39135119 accttggggtgtgcaaagagctcaatggaactgggcctccccaaggtatgggcc 39135066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 45827200 - 45827241
Alignment:
Q  174 ttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  45827200 ttagcccgcgacccgtgtagggccgggctcgggtagtatatt 45827241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 48605373 - 48605304
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | | ||||| |||||||||||  |||||| |||| ||||||| |||||||||||    
T  48605373 atgtaatttttaatatgggtcggcctgtttagcccgcggcccgtggagggtcgggctcgggtagtatatt 48605304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 700436 - 700502
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||  ||||||  ||||| ||||| ||||||| |||||||||||    
T  700436 taatttttaatacgggccggcccgttaggcccgcggcccgtatagggtcgggctcgggtagtatatt 700502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 42102665 - 42102731
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||||||||| |  ||| |||||| |||| ||| |||||||||||    
T  42102665 taatttttaatacgggccggcccgtttagcccacggcccatgtaggaccggactcgggtagtatatt 42102731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 44922697 - 44922763
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||| || |||||||  ||||||||||||||| ||  |||||||||||    
T  44922697 taatttttaatacgggccggcccattaagcccgcggcccgtgtagggccggacttgggtagtatatt 44922763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 50863466 - 50863400
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||   || |||||||| | ||||| |||||||||||||||||||| | |||||||||    
T  50863466 taatttttaatacaggctggcccgttaaacccgcgacccgtgtagggccgggctcggatagtatatt 50863400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 12254816 - 12254747
Alignment:
Q  146 atgtaatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    ||||||||||||||| | |  | |||||||| |||||  ||||||||||||||| |||| ||||||||||    
T  12254816 atgtaatttttaatacgggatgacccgtttaacccgcggcccgtgtagggccggactcaagtagtatatt 12254747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 1447 - 1513
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  ||||||||||||||||||  |||||||||||    
T  1447 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggcttgggtagtatatt 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 63 - 129
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||| ||||||||||  ||||||||||||||||||| |||||||||||    
T  63 taatttttaatacgggccggcccttttagcccgcggcccgtgtagggccgggctcgggtagtatatt 129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 1662 - 1597
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||||| ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  1662 taatttttaataagggccggcccgtt-agcccgcggcccgtgtagggccgggctcgggtagtatatt 1597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 74500 - 74434
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  74500 taatttttaatacgggccggcccgttaagcccgcggcccgtgtagggccgggctcgggtagtatatt 74434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 231307 - 231241
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||||||||| |||||||  ||| |||||||||||||||||||||||||||    
T  231307 taatttttaatacgggccggcccgttaagcccgcggcccatgtagggccgggctcaggtagtatatt 231241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 56731 - 56797
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||| ||| |||||||||||| |||||||||||||| |||| |||||||||||    
T  56731 taatttttaatacgggccagcctgtttagcccgcagcccgtgtagggccgagctcgggtagtatatt 56797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 28123 - 28190
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctc-aggtagtatatt 215  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||||||||  |||||||||||    
T  28123 taatttttaatacgggccggcccgtttagcccgcggcccgtgtagggccgggctcggggtagtatatt 28190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 11538 - 11485
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctc 203  Q
    |||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  11538 taatttttaatacgggccggcccgtt-agcccgcgacccgtgtagggccgggctc 11485  T

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Target: scaffold0360 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 12414 - 12348
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | |||||||| ||||||||||  ||||||||||||| ||||| | |||||||||    
T  12414 taatttttaatacgggccggcccatttagcccgcggcccgtgtagggccaggctcggatagtatatt 12348  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 854 - 802
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggc 201  Q
    |||||||||||| | |||||||||||||| ||||  |||||||||||||||||    
T  854 taatttttaatacgggccggcccgtttaggccgcggcccgtgtagggccgggc 802  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 11647 - 11713
Alignment:
Q  149 taatttttaataagagccggcccgtttagcccgcaacccgtgtagggccgggctcaggtagtatatt 215  Q
    |||||||||||| | ||||| ||||| |||||||  || |||||||||||| ||| |||||||||||    
T  11647 taatttttaatacgggccggtccgttaagcccgcggcctgtgtagggccggactcgggtagtatatt 11713  T

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