View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5762_high_11 (Length: 214)
Name: NF5762_high_11
Description: NF5762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5762_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 19496347 - 19496160
Alignment:
| Q |
7 |
tatgaatcccgcattttatatctaagaaccagaaaacacacatggctacggttatggcaacttcttcctctcgccctgttgctgctacagtgcctcataa |
106 |
Q |
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| T |
19496347 |
tatgcatcccgcattttatatctaagaaccagaaaacacaaatggctacggttatggcaacttcttcctctcgccctgttgctgctacagtgcctcataa |
19496248 |
T |
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| Q |
107 |
aaaatatgatgtatttatcaactttcgaggccatgatactcgtgttgggttcaccagccatcttgaatctgctttgtatcgaaactat |
194 |
Q |
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| T |
19496247 |
aaaatatgatgtatttatcaactttcgaggccatgatactcgtgttgggttcaccagccatcttgaatctgctttgtgtcgaaactat |
19496160 |
T |
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