View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5762_high_9 (Length: 247)
Name: NF5762_high_9
Description: NF5762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5762_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34951991 - 34951762
Alignment:
| Q |
1 |
tattagtaacctatccctaaagactattcctaaagacttctatcgcaatcagaagtaacaacgctactaataaaataacagtagcttgcttacaagtcac |
100 |
Q |
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| T |
34951991 |
tattagtaacctatccttaaagactattcctaaagacttctatcgcaatcagaagtaacaaagctactaataaattaacagtagcttgcttacaagccag |
34951892 |
T |
|
| Q |
101 |
aatttcaaaaacacacagtatacactgccaggataaacagttttacaccgtcaatcaatcatattagtcagatcattaaaaatagtatttgacatttatc |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
34951891 |
aatttcaaaaacacacagtatacactgccagtataaacagttttacactgtcaatcaatcatattggtcagatcattaaaaatagtatttgacatttatc |
34951792 |
T |
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| Q |
201 |
acaatcacttctaaagttagacacatgact |
230 |
Q |
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||||||||||||||||| |||||||||||| |
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| T |
34951791 |
acaatcacttctaaagtcagacacatgact |
34951762 |
T |
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