View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5762_low_5 (Length: 378)

Name: NF5762_low_5
Description: NF5762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5762_low_5
NF5762_low_5
[»] chr1 (15 HSPs)
chr1 (19-368)||(31162789-31163151)
chr1 (42-177)||(4621237-4621372)
chr1 (42-177)||(15059402-15059537)
chr1 (42-177)||(24122085-24122220)
chr1 (25-121)||(37047037-37047133)
chr1 (42-177)||(7766727-7766862)
chr1 (42-177)||(9500355-9500490)
chr1 (42-177)||(24674455-24674590)
chr1 (25-177)||(32729590-32729741)
chr1 (25-95)||(1486463-1486533)
chr1 (89-177)||(7578518-7578606)
chr1 (88-176)||(17935877-17935965)
chr1 (23-95)||(25237071-25237143)
chr1 (117-177)||(40802069-40802129)
chr1 (42-177)||(45859043-45859178)
[»] chr5 (17 HSPs)
chr5 (25-177)||(19145412-19145563)
chr5 (44-177)||(8484661-8484794)
chr5 (42-177)||(27498731-27498866)
chr5 (42-177)||(32059440-32059575)
chr5 (44-177)||(11926501-11926635)
chr5 (25-100)||(36895470-36895545)
chr5 (42-177)||(15641106-15641240)
chr5 (50-177)||(19456211-19456337)
chr5 (42-177)||(38684270-38684404)
chr5 (130-177)||(7085626-7085673)
chr5 (126-177)||(10837442-10837493)
chr5 (126-177)||(24158166-24158217)
chr5 (126-177)||(33737888-33737938)
chr5 (91-177)||(35425124-35425210)
chr5 (125-177)||(10631289-10631341)
chr5 (42-177)||(18207269-18207404)
chr5 (42-177)||(30485890-30486025)
[»] chr3 (30 HSPs)
chr3 (42-177)||(8456150-8456285)
chr3 (42-177)||(30257686-30257821)
chr3 (42-177)||(39041852-39041987)
chr3 (42-177)||(49258262-49258397)
chr3 (42-177)||(1178234-1178367)
chr3 (42-177)||(45272416-45272551)
chr3 (106-177)||(50731237-50731308)
chr3 (106-177)||(50781546-50781617)
chr3 (44-177)||(10083819-10083952)
chr3 (42-177)||(8097279-8097414)
chr3 (89-177)||(26174222-26174310)
chr3 (89-177)||(32151533-32151621)
chr3 (42-177)||(34492575-34492710)
chr3 (42-177)||(35492973-35493108)
chr3 (42-177)||(40133449-40133584)
chr3 (42-177)||(40940887-40941022)
chr3 (42-177)||(45529755-45529889)
chr3 (42-177)||(52821636-52821770)
chr3 (42-177)||(53233911-53234045)
chr3 (130-177)||(4048100-4048147)
chr3 (25-108)||(34844423-34844506)
chr3 (89-176)||(48104986-48105073)
chr3 (44-177)||(10190742-10190875)
chr3 (89-177)||(8958035-8958124)
chr3 (42-177)||(15566500-15566634)
chr3 (42-177)||(25289715-25289849)
chr3 (42-177)||(46576410-46576545)
chr3 (89-177)||(48977497-48977585)
chr3 (89-177)||(52455649-52455737)
chr3 (117-177)||(53424177-53424237)
[»] chr8 (14 HSPs)
chr8 (42-177)||(34237655-34237790)
chr8 (28-177)||(18128565-18128714)
chr8 (42-177)||(3734623-3734758)
chr8 (42-177)||(4718711-4718846)
chr8 (42-177)||(8765526-8765661)
chr8 (42-177)||(20305974-20306109)
chr8 (42-177)||(21092607-21092742)
chr8 (42-176)||(28193540-28193674)
chr8 (23-109)||(24339691-24339777)
chr8 (88-177)||(2639411-2639500)
chr8 (89-177)||(10292167-10292255)
chr8 (89-177)||(21603343-21603431)
chr8 (42-177)||(32879345-32879480)
chr8 (131-177)||(33747037-33747083)
[»] chr4 (13 HSPs)
chr4 (42-177)||(34723861-34723996)
chr4 (45-177)||(33696279-33696411)
chr4 (42-177)||(27528795-27528930)
chr4 (42-177)||(34844758-34844893)
chr4 (42-177)||(40058852-40058987)
chr4 (42-177)||(5609202-5609337)
chr4 (42-176)||(52983681-52983815)
chr4 (45-177)||(32986262-32986394)
chr4 (42-103)||(41085088-41085149)
chr4 (59-100)||(12710258-12710299)
chr4 (50-83)||(16339715-16339748)
chr4 (53-177)||(46714466-46714590)
chr4 (52-112)||(10125892-10125952)
[»] chr2 (13 HSPs)
chr2 (42-177)||(35171862-35171997)
chr2 (42-177)||(13266552-13266686)
chr2 (89-177)||(41329951-41330039)
chr2 (23-177)||(6006890-6007043)
chr2 (53-177)||(28668946-28669070)
chr2 (42-177)||(30466830-30466965)
chr2 (89-177)||(31778140-31778228)
chr2 (144-177)||(8299859-8299892)
chr2 (89-177)||(11941210-11941298)
chr2 (42-177)||(15038021-15038156)
chr2 (42-177)||(33827573-33827708)
chr2 (50-177)||(36390569-36390695)
chr2 (89-177)||(44946053-44946141)
[»] chr6 (14 HSPs)
chr6 (59-177)||(14504082-14504200)
chr6 (25-175)||(17149458-17149608)
chr6 (42-177)||(11448933-11449068)
chr6 (25-177)||(9208297-9208449)
chr6 (89-177)||(9690638-9690726)
chr6 (42-177)||(15360098-15360233)
chr6 (42-177)||(21148511-21148645)
chr6 (42-177)||(34147408-34147543)
chr6 (42-177)||(34160024-34160159)
chr6 (42-177)||(654146-654281)
chr6 (42-177)||(3222636-3222770)
chr6 (97-176)||(9239092-9239171)
chr6 (96-177)||(14212998-14213079)
chr6 (89-177)||(21982321-21982408)
[»] chr7 (22 HSPs)
chr7 (42-177)||(18044173-18044308)
chr7 (42-177)||(21217833-21217968)
chr7 (42-177)||(22119954-22120089)
chr7 (42-177)||(40542910-40543045)
chr7 (58-177)||(7262299-7262416)
chr7 (42-177)||(2751337-2751472)
chr7 (42-177)||(7275343-7275478)
chr7 (89-176)||(32849704-32849791)
chr7 (23-177)||(28647016-28647170)
chr7 (132-177)||(22299958-22300003)
chr7 (42-177)||(17196950-17197085)
chr7 (53-177)||(21574102-21574226)
chr7 (60-104)||(32087194-32087238)
chr7 (130-177)||(22696475-22696522)
chr7 (25-84)||(37056263-37056322)
chr7 (59-176)||(19421314-19421431)
chr7 (127-177)||(28089970-28090020)
chr7 (42-177)||(654705-654839)
chr7 (42-177)||(2103121-2103254)
chr7 (117-177)||(2344440-2344500)
chr7 (89-177)||(3851870-3851958)
chr7 (89-177)||(42913513-42913601)
[»] scaffold0576 (1 HSPs)
scaffold0576 (42-177)||(5082-5217)
[»] scaffold0070 (1 HSPs)
scaffold0070 (42-177)||(40387-40521)
[»] scaffold0051 (1 HSPs)
scaffold0051 (42-177)||(52871-53006)
[»] scaffold0019 (1 HSPs)
scaffold0019 (42-177)||(161871-162006)
[»] scaffold1175 (1 HSPs)
scaffold1175 (89-177)||(2426-2514)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-177)||(66863-66951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (89-177)||(32397-32484)
[»] scaffold0079 (1 HSPs)
scaffold0079 (50-83)||(53112-53145)
[»] scaffold0623 (1 HSPs)
scaffold0623 (42-177)||(1057-1191)
[»] scaffold0366 (1 HSPs)
scaffold0366 (42-177)||(9300-9434)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 368
Target Start/End: Original strand, 31162789 - 31163151
Alignment:
Q  19 gtgtttctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaa 118  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  31162789 gtgtttctcttaaggttttaggctcgattcactctggtaccaatttcggtggacaggtacatacagtgctttgctctagctttaaatggggcccacacaa 31162888  T
Q  119 gtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagttttnnnnnnnnnnnnnnnnn--ttgaaaggtgggagaatataag 216  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||||                   ||||||||||||||||||||||    
T  31162889 gtgagcagtgagattggtcatctctaattagtcgatccttgaatcggataccgagttttaaaaaaaaaattgaaaaaattgaaaggtgggagaatataag 31162988  T
Q  217 gttgaaca-----------tatataacaatattagagtttagtggttgggaaattgaaaggtggtagaatataagtggttggggtgtagagtttagtttg 305  Q
    ||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31162989 gttgaacaaatataatacatatataacaatattagagtttagtggttgggaaattgaaaggtggtagaatataagtggttggggtgtagagtttagtttg 31163088  T
Q  306 gattctacatgatgaagaatcagtagaaagaaagagtagattgacatttgtaggaaagtatta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31163089 gattctacatgatgaagaatcagtagaaagaaagagtagattgacatttgtaggaaagtatta 31163151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 4621372 - 4621237
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| |||| || |  ||||| |  ||| ||||||||| |    
T  4621372 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccc 4621274  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  4621273 tcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 15059537 - 15059402
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| |||| || |  ||||| |  ||||||||||||| |    
T  15059537 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccc 15059439  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  15059438 tcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 24122085 - 24122220
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||| | |  ||||| |  ||| ||||||||| |    
T  24122085 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccc 24122183  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  24122184 tcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 37047037 - 37047133
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtg 121  Q
    |||||||||| | ||| | ||||| | ||||||| ||||| | ||| | ||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  37047037 ctctcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagagctttgctctagctttaaatggggcccccacaagtg 37047133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 7766862 - 7766727
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| | ||||||| ||| | |||| ||||||| |||| |||||  ||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  7766862 tcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccc 7766764  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||| ||||||||    
T  7766763 tcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 9500490 - 9500355
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| || |||| || ||||| |  ||||||||||||       
T  9500490 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcccccacaagtgggcggtgagattggtctct 9500392  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||| ||||||||    
T  9500391 tcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 24674455 - 24674590
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  24674455 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 24674553  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||| ||||    
T  24674554 tcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 32729590 - 32729741
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagt 124  Q
    ||||||| || | ||| ||||||| || |||| ||||||||| ||| ||||| ||||||| |||| ||||| ||||||||||||| || |  ||||| |     
T  32729590 ctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtccatacagagctt-gctctggctttaaatggggtccccgcaagtgggc 32729688  T
Q  125 agtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
     ||| ||||| ||| ||  ||||||| | || ||| |||||||||||||||||    
T  32729689 ggtgggattgatccccttggattagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 1486463 - 1486533
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctct 95  Q
    |||||||||| | ||| ||||||| || |||| |||||||||||||  |||| ||||||| ||||||||||    
T  1486463 ctctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctct 1486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 7578518 - 7578606
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||  ||||||| ||||||| |  ||||| || ||| ||||||| | ||| |||||||||||  ||| |||||||||||||||||    
T  7578518 ttgctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagtttt 7578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 17935877 - 17935965
Alignment:
Q  88 tttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagttt 176  Q
    |||||||| |||||||| ||||||| |  ||||| |   || ||||||||| ||| ||||||| ||| |||| ||||||||||||||||    
T  17935877 tttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 25237143 - 25237071
Alignment:
Q  23 ttctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctct 95  Q
    |||||||||||| | ||| ||||||| |||| || ||||||||| ||| ||||| ||||||| | ||||||||    
T  25237143 ttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctct 25237071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 40802129 - 40802069
Alignment:
Q  117 aagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||| || ||||||||||||||||   |||||| ||| ||||||||| ||||||||||||    
T  40802129 aagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 45859178 - 45859043
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||  |||| ||||| ||||||||  |||||| |  ||||| || ||  ||||||||| |    
T  45859178 tcgattccctctggtgccaatttcggtgggctaagtccatacatcgctt-gctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcccc 45859080  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || |||||||||||  ||| |||||||||||| ||||    
T  45859079 tcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 19145563 - 19145412
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagt 124  Q
    |||||||||| |  || ||||||| ||||||| ||||||||| ||| ||||| ||||||| |||||||||| ||||||||| || ||| |  ||||| |     
T  19145563 ctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaat-ggtcccccgcaagtgggc 19145465  T
Q  125 agtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
     ||| ||||||||| ||| ||||||||| | |||| |||||||||||||||||    
T  19145464 ggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 8484794 - 8484661
Alignment:
Q  44 gattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctc 142  Q
    ||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |||    
T  8484794 gattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 8484696  T
Q  143 tgattagttgatccttgaatcggataccgagtttt 177  Q
     ||||||| ||| |||| |||||||||||||||||    
T  8484695 ggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 27498866 - 27498731
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||  |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  27498866 tcgattccctctggtgccaatttcggtgggctaagtccatacatagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 27498768  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  27498767 tcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 32059575 - 32059440
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    |||||||  |||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  32059575 tcgattccttctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 32059477  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| | |||||| |||||||||||||||||    
T  32059476 tcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 11926635 - 11926501
Alignment:
Q  44 gattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaa-aagtgagtagtgagattggtcctct 141  Q
    ||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |   ||||| || ||| ||||||||| ||    
T  11926635 gattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccct 11926537  T
Q  142 ctgattagttgatccttgaatcggataccgagtttt 177  Q
    | ||||||| ||| |||| |||||||||||||||||    
T  11926536 cggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 36895470 - 36895545
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctt 100  Q
    |||||||||||| | | ||||||| ||||||||||||||||| ||| ||||| ||||||  |||||||||| ||||    
T  36895470 ctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggctt 36895545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 15641240 - 15641106
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||  ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  15641240 tcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 15641142  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||| ||||||||||||||||    
T  15641141 tcggattagtcgattcttga-tcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 19456337 - 19456211
Alignment:
Q  50 ctctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgatta 148  Q
    ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| |||||    
T  19456337 ctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccc-cgcaagtgggcggtgggattggtcccctcggatta 19456240  T
Q  149 gttgatccttgaatcggataccgagtttt 177  Q
    || ||| |||| |||||||||||||||||    
T  19456239 gtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 38684270 - 38684404
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  |||||||  ||| ||||||||| |    
T  38684270 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc-cgcaagtgagcggtgggattggtcccc 38684367  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||| ||||    
T  38684368 tcggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 7085673 - 7085626
Alignment:
Q  130 gattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||||||||||    
T  7085673 gattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10837442 - 10837493
Alignment:
Q  126 gtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||||| ||| ||||||||| |||||  |||||||||||||||||    
T  10837442 gtgagattggtcccctcagattagttggtccttagatcggataccgagtttt 10837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 24158217 - 24158166
Alignment:
Q  126 gtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||||| ||| ||||||| | ||||||||||||||||||| ||||    
T  24158217 gtgagattggtcccctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 33737888 - 33737938
Alignment:
Q  126 gtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||||| ||| | ||||||||| ||||||||||||||||||||||    
T  33737888 gtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagtttt 33737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 35425124 - 35425210
Alignment:
Q  91 gctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||||||| ||||||| ||| |||| |||||||||||| ||||    
T  35425124 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 10631341 - 10631289
Alignment:
Q  125 agtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  10631341 agtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10631289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 18207269 - 18207404
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||| ||| ||||||||| ||| | |||| ||||||| |||| | ||| |||||||| | ||||| |  ||||| |  ||| ||||||||| |    
T  18207269 tcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccc 18207367  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  18207368 tcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 30485890 - 30486025
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    |||||||||||||||  |||||||| ||| | |||| ||||||| |||| ||||| |||||||| |  |||| |  ||||| |  ||| ||||||||| |    
T  30485890 tcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcccc 30485988  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || |||||||  || |||| |||||||||||||||||    
T  30485989 tcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 8456285 - 8456150
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| | |||| ||||||||| |    
T  8456285 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccc 8456187  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||||||||||||    
T  8456186 tcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 30257686 - 30257821
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| || |||| ||||||||||||||| |||| ||||||| |||| ||||| |||||||||||||||| |  ||||| |  |||  |||||||| |    
T  30257686 tcgattccctttggtgccaatttcgatggactaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccc 30257784  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||| ||||    
T  30257785 tcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 39041987 - 39041852
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||| ||| |||| ||||| |||||||| ||||||| |  ||||| || ||| ||||||||| |    
T  39041987 tcgattctctctggtgccaatttcggtgggctaagtccatgcagagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattggtccac 39041889  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  39041888 tcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 49258397 - 49258262
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| || ||||| |  ||| ||||||||| |    
T  49258397 tcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggcggtgggattggtcccc 49258299  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  49258298 tcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 1178234 - 1178367
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctct 141  Q
    ||||||| | ||||| ||||||||| ||| ||||| |||||||  ||||||||| |||||||||||||||| || | ||| |  ||| ||||||||| ||    
T  1178234 tcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggggccc-cacacgtgggcggtgggattggtcc-ct 1178331  T
Q  142 ctgattagttgatccttgaatcggataccgagtttt 177  Q
    | ||||||| ||  |||| |||||||||||||||||    
T  1178332 cggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 45272551 - 45272416
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||| | |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  45272551 tcgattccctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 45272453  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||||||  |||| |||||||||||||||||    
T  45272452 tcggattagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 50731308 - 50731237
Alignment:
Q  106 ggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||||| ||||| |  ||| ||||||||| ||| ||||||| |||||||| |||||||||||||||||    
T  50731308 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 50781546 - 50781617
Alignment:
Q  106 ggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||||| ||||| |  ||| ||||||||| ||| ||||||| |||||||| |||||||||||||||||    
T  50781546 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 10083952 - 10083819
Alignment:
Q  44 gattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctc 142  Q
    ||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| || |||||    ||| ||||||||| |||    
T  10083952 gattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctc 10083854  T
Q  143 tgattagttgatccttgaatcggataccgagtttt 177  Q
     ||||||| ||| |||| |||||||||||||||||    
T  10083853 ggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 8097414 - 8097279
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || | ||||||||||| | |||| ||||||| || | ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  8097414 tcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 8097316  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  8097315 tcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 26174222 - 26174310
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| ||||||||| |||||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  26174222 ttgctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 32151533 - 32151621
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||||||||||||| |||  |||||| ||| |||| |||||||||||||||||    
T  32151533 ttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 34492710 - 34492575
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||| | ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| |||||||||      
T  34492710 tcgattccctctgctgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccat 34492612  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||||||| |||| ||| |||||||||||||    
T  34492611 tcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 35492973 - 35493108
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  35492973 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 35493071  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| || | ||||||||||||    
T  35493072 tcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 40133584 - 40133449
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||||||  |||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  40133584 tcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 40133486  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  40133485 tcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 40940887 - 40941022
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||||| |||| ||||||| |||| |||||  ||||||| ||||||| || ||||| || ||  ||||||||| |    
T  40940887 tcgattccctctggtgccaatttcggtggactaagtccatacagagctt-gctctgactttaaacggggcccccacaagtgggtggtaggattggtcccc 40940985  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||| |  || |||||||| |||||||||||||    
T  40940986 tcgaattactcaattcttgaatcagataccgagtttt 40941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 45529889 - 45529755
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||  ||||||||||||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  45529889 tcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccc 45529791  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||| ||||||||||||||||    
T  45529790 tcggattagtcgattcttga-tcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 52821770 - 52821636
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||  | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  52821770 tcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggccc-cgtaagtgggcggtgggattggtcccc 52821673  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  52821672 tcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 53234045 - 53233911
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| ||| |||| ||||||| |  ||||| |  ||| ||||||||| |    
T  53234045 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccc 53233947  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||| ||||||||||||||||    
T  53233946 tcggattagtcgattcttga-tcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 4048100 - 4048147
Alignment:
Q  130 gattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||| ||| ||||||||||| |||| |||||||||||||||||    
T  4048100 gattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 34844423 - 34844506
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggg 108  Q
    |||||||||| | ||| ||||||| |||  |  ||||||||| ||||| ||||||||||| |||||||| | ||||||||||||    
T  34844423 ctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagagctttgctatggctttaaatggg 34844506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 48104986 - 48105073
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagttt 176  Q
    ||||||| ||||||||  |||||| || ||||| |  |||||||||||||  || ||||||| ||| |||| ||||||||||||||||    
T  48104986 ttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 10190875 - 10190742
Alignment:
Q  44 gattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctc 142  Q
    ||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  |||||    ||| ||||||||| |||    
T  10190875 gattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctc 10190777  T
Q  143 tgattagttgatccttgaatcggataccgagtttt 177  Q
     ||||||| ||| |||| |||||||||||||||||    
T  10190776 ggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 8958124 - 8958035
Alignment:
Q  89 ttgctctagctttaaa-tggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||||||||||| |||||||| |  ||||| |  ||| ||||||||| ||||||||| | ||| |||| ||| |||||||||||||    
T  8958124 ttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 15566634 - 15566500
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  15566634 tcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc-cgcaagtgggcggtgggattggtcccc 15566537  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  15566536 tcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 25289849 - 25289715
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  25289849 tcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-c 25289752  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  25289751 tcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 46576410 - 46576545
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||  ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||  ||||||||| |    
T  46576410 tcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtcggattggtcccc 46576508  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    |  ||||||| ||| |||| |||||||||||||||||    
T  46576509 ttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 48977497 - 48977585
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| |||||||    ||||| |  ||| ||||||||| ||| ||||||| | |||||| |||||||||||||||||    
T  48977497 ttgctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 52455737 - 52455649
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||  ||||||| ||||||| |  |||||| | ||| ||||||||| ||| ||||||| ||| |||| || ||||||||||||||    
T  52455737 ttgctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 53424237 - 53424177
Alignment:
Q  117 aagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  53424237 aagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 34237790 - 34237655
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  |||||||  ||| ||||||||| |    
T  34237790 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccc 34237692  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  34237691 tcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 18128565 - 18128714
Alignment:
Q  28 tcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagt 127  Q
    ||||||| ||||  ||||||| ||||||| ||||||||| ||| | | | |||| || |||||||||| |||||||| ||||||| |  ||||| |  ||    
T  18128565 tcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggt 18128664  T
Q  128 gagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    | ||||||||||||| ||||||| | | |||| |||| ||||||||||||    
T  18128665 gggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 3734758 - 3734623
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  || || | |||| ||||||||| |    
T  3734758 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccc 3734660  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  3734659 tcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 4718711 - 4718846
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  4718711 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 4718809  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  4718810 tcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 8765661 - 8765526
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||||||| | |||| ||||||| |||| ||||| |||||||| ||||| | |  ||||| |  ||| ||||||||| |    
T  8765661 tcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccc 8765563  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  8765562 tcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 20305974 - 20306109
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    |||||||  |||||| ||||||||||||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  20305974 tcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccc 20306072  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| |||||||| |||||||||||||||||    
T  20306073 tcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 21092607 - 21092742
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    |||||||  |||||| ||||||||||||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  21092607 tcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccc 21092705  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| |||||||| |||||||||||||||||    
T  21092706 tcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 28193540 - 28193674
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| |||   |||| ||||||| |||| ||||| |||||||| |||||||  | ||||| |  ||| ||||||||| |    
T  28193540 tcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctacaagtgggcggtgggattggtcccc 28193638  T
Q  141 tctgattagttgatccttgaatcggataccgagttt 176  Q
    || ||||||| ||| |||| ||||||||||||||||    
T  28193639 tcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 24339777 - 24339691
Alignment:
Q  23 ttctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatgggg 109  Q
    |||||||||||| ||||| ||||||  |||| |||||||||||| |||| |||| ||||||  |||||||| | |||||||| ||||    
T  24339777 ttctctcaaggtcttaggttcgattttctcttgtaccaatttcggtggataagttcatacaaagctttgctttggctttaaacgggg 24339691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 2639500 - 2639411
Alignment:
Q  88 tttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 10292167 - 10292255
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| || ||||| |  ||| |||||||||  || ||||||||||| |||| |||| ||||||||||||    
T  10292167 ttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 21603343 - 21603431
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  21603343 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 32879345 - 32879480
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| |||||  | ||||| ||||||| || ||||| |  ||| ||||||||| |    
T  32879345 tcgattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctgacattaaacggggcccccacaagtgggcggtgggattggtcccc 32879443  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| || ||||||||||||||    
T  32879444 tcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 33747037 - 33747083
Alignment:
Q  131 attggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||| ||||| ||||||| |||||||| |||||||||||||||||    
T  33747037 attggttctctcggattagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 34723861 - 34723996
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||  |||| ||||| |||||||| ||||||| |  ||||| || ||| |||||||||||    
T  34723861 tcgattccctctggtgccaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctc 34723959  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  34723960 tcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 33696411 - 33696279
Alignment:
Q  45 attcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctct 143  Q
    |||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||||||||||| |  ||||| |  |||||||||||||||||     
T  33696411 attccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcg 33696313  T
Q  144 gattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||  || |||| |||||||| ||||||||    
T  33696312 gattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 27528930 - 27528795
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||| | ||||||| |  ||||| |  ||||||||||||| |    
T  27528930 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttatacggggcccccgcaagtgggcggtgagattggtcccc 27528832  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  27528831 tcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 34844893 - 34844758
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  34844893 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 34844795  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  34844794 tcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 40058987 - 40058852
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  40058987 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 40058889  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  40058888 tcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 5609337 - 5609202
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||||||||||| |  |||||    ||| ||||| ||| |    
T  5609337 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattgatcccc 5609239  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  5609238 tcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 52983681 - 52983815
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||  ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  52983681 tcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 52983779  T
Q  141 tctgattagttgatccttgaatcggataccgagttt 176  Q
    || ||||||| ||| |||| ||||||||||||||||    
T  52983780 tcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 32986262 - 32986394
Alignment:
Q  45 attcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctct 143  Q
    |||| ||||||| ||||||||| ||| | |||| ||||||| |||| |||||  ||||||||||||||| |  ||||| |  ||| ||||||||| |||     
T  32986262 attccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcg 32986360  T
Q  144 gattagttgatccttgaatcggataccgagtttt 177  Q
    || |||| ||| |||| |||||||||||||||||    
T  32986361 gaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 41085088 - 41085149
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaa 103  Q
    ||||||| ||||| | || |||||||||||||||| |||| || ||||||||||||||||||    
T  41085088 tcgattctctctgatgccgatttcgatggacaagtccatatagagctttgctctagctttaa 41085149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 12710258 - 12710299
Alignment:
Q  59 caatttcgatggacaagtacatacagtgctttgctctagctt 100  Q
    |||||||| ||||||||| |||||||||||||||||| ||||    
T  12710258 caatttcggtggacaagtccatacagtgctttgctctggctt 12710299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 16339748 - 16339715
Alignment:
Q  50 ctctggtaccaatttcgatggacaagtacataca 83  Q
    ||||||||||||||||||||||||||| ||||||    
T  16339748 ctctggtaccaatttcgatggacaagtccataca 16339715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 46714466 - 46714590
Alignment:
Q  53 tggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagtt 151  Q
    |||| ||||||||| ||| | |||| ||||||| |||| || || |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| |||||||     
T  46714466 tggtgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtc 46714564  T
Q  152 gatccttgaatcggataccgagtttt 177  Q
     || ||||||||||||||||||||||    
T  46714565 aattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 10125892 - 10125952
Alignment:
Q  52 ctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggccc 112  Q
    ||||| ||||||||  ||| ||||  ||||||| ||||||||||||||||||| |||||||    
T  10125892 ctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccc 10125952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 35171862 - 35171997
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||||| |||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  35171862 tcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 35171960  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||||||||||||    
T  35171961 tcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 13266552 - 13266686
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||||||||||| |||||| || ||||| |||| ||||||| || ||||||| |||||||| ||||||| |  ||||| ||| || ||||||||| |    
T  13266552 tcgattcactctggtgccaattccggtggactaagtccatacagagc-ttgctctggctttaaacggggccc-cgcaagtgggtaatgggattggtcccc 13266649  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||| ||||||||    
T  13266650 tcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 41329951 - 41330039
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||||||||||| || ||||| |  ||||||||||||| ||| ||||||| | | |||| | |||||||||||||||    
T  41329951 ttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 6007043 - 6006890
Alignment:
Q  23 ttctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtga 122  Q
    ||||||||||||| |||  ||||||| ||||| ||||||||||| ||  | ||| ||||||| |||||| |||||||| |||||| || |    |||||     
T  6007043 ttctctcaaggttctagattcgattctctctgataccaatttcggtgttcgagtccatacagagctttgttctagcttaaaatggagctc-tgcaagtgg 6006945  T
Q  123 gtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
       ||| ||||||||  ||| ||||||| |||||||||||| |||||||||||||    
T  6006944 acggtgtgattggtctcctcagattagtcgatccttgaatcagataccgagtttt 6006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 28668946 - 28669070
Alignment:
Q  53 tggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagtt 151  Q
    |||| ||||||||| ||||| |||| ||||||| |||| ||| | |||||||| ||||||| || ||||| |  ||| ||||||||| ||| |||||||     
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtc 28669044  T
Q  152 gatccttgaatcggataccgagtttt 177  Q
    |||  ||| |||||||||||||||||    
T  28669045 gatttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 30466965 - 30466830
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||| | ||||||||| ||| | |||| ||||||| |||| ||||| ||||||||  |||||| |  ||||| | |||| |||||||||      
T  30466965 tcgattctctctgctgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtccct 30466867  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  30466866 tcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 31778140 - 31778228
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||||||||||| |  |||||    ||||||||||||||||| |||||||   | |||| |||||||||||||||||    
T  31778140 ttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 8299892 - 8299859
Alignment:
Q  144 gattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  8299892 gattagttgattcttgaatcggataccgagtttt 8299859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 11941298 - 11941210
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  11941298 ttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 15038021 - 15038156
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| || |||| ||||||||| ||| | |||| ||||||| |||| ||| | |||||||| || |||| |  ||||| |  ||| ||||||||| |    
T  15038021 tcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaagtgggcggtgggattggtcccc 15038119  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  15038120 tcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 33827708 - 33827573
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| |||    ||||| |  ||| ||||||||| |    
T  33827708 tcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacgggacccctgcaagtgggcggtgggattggtcccc 33827610  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    |  ||||||| ||| |||| |||||||||||||||||    
T  33827609 ttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 36390695 - 36390569
Alignment:
Q  50 ctctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgatta 148  Q
    ||||||| ||||||||| ||||| |||| ||||||  |||| |||||  ||||||||||| ||| |  ||||| |  ||| ||||||||| ||| ||| |    
T  36390695 ctctggtgccaatttcggtggactaagtccatacaaagctt-gctctgactttaaatgggacccccgcaagtgggcggtgggattggtcc-ctcggatca 36390598  T
Q  149 gttgatccttgaatcggataccgagtttt 177  Q
    || ||| ||||||||||||||||||||||    
T  36390597 gtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 44946141 - 44946053
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  44946141 ttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 14504200 - 14504082
Alignment:
Q  59 caatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatcctt 158  Q
    ||||||||||||  |||| ||||||||| |||||||| | ||||||||||| || |  ||||| |  ||| ||||| |||||||  |||||| |||||||    
T  14504200 caatttcgatgggtaagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatcctt 14504101  T
Q  159 gaatcggataccgagtttt 177  Q
    | |||||||||||||||||    
T  14504100 gtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 17149608 - 17149458
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagt 124  Q
    |||||||||| | ||| ||||||| ||||||| | ||||||| | | ||||| ||||||| || ||||| | |||||||||||||||| |  ||||||      
T  17149608 ctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaac 17149509  T
Q  125 agtgagattggtcctctctgattagttgatccttgaatcggataccgagtt 175  Q
     ||| ||||||||| |||  |||||| | |||||||||| |||||||||||    
T  17149508 ggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 11448933 - 11449068
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  11448933 tcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 11449031  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||| ||||||||    
T  11449032 tcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 9208297 - 9208449
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagt 124  Q
    |||||||||| | ||| ||||||| | ||||| ||||||||| ||| ||||| ||||||| || ||||| | |||||||||||||||| |  ||||| |     
T  9208297 ctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggc 9208396  T
Q  125 agtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
     ||| ||||||||  ||| || |||| ||| |||| |||  ||||||||||||    
T  9208397 ggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 9690726 - 9690638
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| || |||||    ||| ||||||||||||| ||||||| ||| |||| |||||||||||||||||    
T  9690726 ttgctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 15360233 - 15360098
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  || || |  ||| ||||||||| |    
T  15360233 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccc 15360135  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  15360134 tcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 21148645 - 21148511
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || ||||||||||||| | |||| ||||||| |||| |||||  ||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  21148645 tcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccc-cgcaagtgggcggtgggattggtcccc 21148548  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||||||||||||    
T  21148547 tcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 34147408 - 34147543
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  34147408 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccc 34147506  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  34147507 tcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 34160024 - 34160159
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  34160024 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccc 34160122  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  34160123 tcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 654281 - 654146
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||| | |  ||||| |  ||| ||||||||| |    
T  654281 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccc 654183  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| |||  ||| |||||||||||||||||    
T  654182 tcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 3222770 - 3222636
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| |||||  ||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  3222770 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgtctttaaacggggccc-cgcaagtgggcggtgggattggtcccc 3222673  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  3222672 tcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 9239092 - 9239171
Alignment:
Q  97 gctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagttt 176  Q
    |||||||||||||||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| ||||||||||||||||    
T  9239092 gctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 14212998 - 14213079
Alignment:
Q  96 agctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||| |||| || |  ||||| || ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  14212998 agctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 21982408 - 21982321
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  21982408 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 18044173 - 18044308
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| |||| || ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| || ||||| || |||  |||||||| |    
T  18044173 tcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggtggtggaattggtcccc 18044271  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  18044272 tcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 21217968 - 21217833
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||| | ||||||||| ||| | |||| ||||||| |||| |||||||||||||| ||| ||| || ||||| |  ||| ||||| ||| |    
T  21217968 tcgattccctctgatgccaatttcggtgggctaagtccatacagagctt-gctctagctttaaacgggccccccacaagtgggcggtgggattgatcccc 21217870  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||||||| |||| |||||||||||||||||    
T  21217869 tcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 22119954 - 22120089
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  22119954 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 22120052  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  22120053 tcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 40543045 - 40542910
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  40543045 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 40542947  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  40542946 tcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 7262299 - 7262416
Alignment:
Q  58 ccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatcct 157  Q
    ||||||||||||||||| | |||| || ||||| |||| |||||||||||| ||| || |||||| | ||| ||||||||| |||  |||||| |  |||    
T  7262299 ccaatttcgatggacaaatccatatagagctttactctggctttaaatgggtccc-cacaagtga-tggtgggattggtcccctcgaattagtcggccct 7262396  T
Q  158 tgaatcggataccgagtttt 177  Q
    ||||||||||||||||||||    
T  7262397 tgaatcggataccgagtttt 7262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 2751337 - 2751472
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  || || |  ||| ||||||||| |    
T  2751337 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccc 2751435  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  2751436 tcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 7275343 - 7275478
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| ||||||||  |||||| |  ||||| |  ||| ||||||||| |    
T  7275343 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccc 7275441  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  7275442 tcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 32849704 - 32849791
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagttt 176  Q
    ||||||| |||||||||||| | | || ||||| | |||| ||||||||| ||| ||||||| ||| |||| ||||||||||||||||    
T  32849704 ttgctctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 28647016 - 28647170
Alignment:
Q  23 ttctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtga 122  Q
    |||||||||||| | ||| ||||||| ||||||| ||||||||| ||| |||||  |||||| | |||||||| ||||  || ||||||| || |||||     
T  28647016 ttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgg 28647115  T
Q  123 gtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |  ||| ||||||| | |||  ||||||   |||||| |||||||| ||||||||    
T  28647116 gcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 22299958 - 22300003
Alignment:
Q  132 ttggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagtttt 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 17197085 - 17196950
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||  | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  17197085 tcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 17196987  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  17196986 tcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 21574226 - 21574102
Alignment:
Q  53 tggtaccaatttcgatggacaagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttg 152  Q
    |||| |||| |||| ||| ||||| ||||||| ||||||| |  ||||  || ||||||| || ||||  |  ||||||||||||| ||| ||||||| |    
T  21574226 tggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcg 21574127  T
Q  153 atccttgaatcggataccgagtttt 177  Q
     |||||| |||||||||||||||||    
T  21574126 gtccttggatcggataccgagtttt 21574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 32087194 - 32087238
Alignment:
Q  60 aatttcgatggacaagtacatacagtgctttgctctagctttaaa 104  Q
    ||||||||||||||||| |||| || |||||||||||||||||||    
T  32087194 aatttcgatggacaagttcatatagagctttgctctagctttaaa 32087238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 22696475 - 22696522
Alignment:
Q  130 gattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||||||||| ||||||| | |||||| |||||||||||||||||    
T  22696475 gattggtcctctcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 37056263 - 37056322
Alignment:
Q  25 ctctcaaggttttaggctcgattcactctggtaccaatttcgatggacaagtacatacag 84  Q
    |||||||||||| ||  ||||||  ||||||| ||||||||||||||||||| |||||||    
T  37056263 ctctcaaggtttgagattcgatttcctctggtgccaatttcgatggacaagtccatacag 37056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 19421314 - 19421431
Alignment:
Q  59 caatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatcct 157  Q
    |||||||||||| | |||| ||||||| |||| |||||  ||||||||||||| | || ||||| |  ||| ||||||||  ||| ||||||| ||| ||    
T  19421314 caatttcgatgggctaagtccatacagagctt-gctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattct 19421412  T
Q  158 tgaatcggataccgagttt 176  Q
    |||||| ||||||||||||    
T  19421413 tgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 28089970 - 28090020
Alignment:
Q  127 tgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||    
T  28089970 tgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 654839 - 654705
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||| ||| |  ||||| |  ||| ||||||||| |    
T  654839 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc-cgcaagtgggcggtgggattggtcccc 654742  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| | | |||| |||||||||||||||||    
T  654741 tcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 2103121 - 2103254
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||  ||||||||| ||| | |||| ||||||| |||| ||||| |||||||||||||||| |  ||||| |  ||| ||||||||| |    
T  2103121 tcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgggattggtcc-c 2103218  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| | || |||||||||||||||||    
T  2103219 tcggattagtcgattcatg-atcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 2344440 - 2344500
Alignment:
Q  117 aagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    |||||||  ||| ||||||||| ||| ||||||| | |||||| |||||||||||||||||    
T  2344440 aagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 3851870 - 3851958
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||| ||||| ||| ||| ||||||| ||| |||| |||||||||||||||||    
T  3851870 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 42913601 - 42913513
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  |||||    ||| ||||||||| ||| ||||||||||| |||  |||||||||||||||||    
T  42913601 ttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 5217 - 5082
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  || || |  ||| ||||||||| |    
T  5217 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccc 5119  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  5118 tcggattagtcgattcttggatcggataccgagtttt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 40387 - 40521
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| |    
T  40387 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-c 40484  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| |||||||||||||||||    
T  40485 tcggattagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 53006 - 52871
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggacaag-tacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| |||  | ||||||| |||| ||||| |||||||| ||||||| |  | ||| |  ||  |||||||||||    
T  53006 tcgattccctctggtgccaatttcggtgggcaaaatccatacagagctt-gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctc 52908  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| ||||||||||||||||||||||    
T  52907 tcggattagtcgattcttgaatcggataccgagtttt 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 161871 - 162006
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||| ||||||||| ||| | |||| ||||||| |||| ||||| ||||| |||||||||| |  ||||| |  ||| ||||||||| |    
T  161871 tcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggcttttaatggggcccccgcaagtgggcggtgggattggtcccc 161969  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    || ||||||| ||| |||| ||| |||||||||||||    
T  161970 tcggattagtcgattcttggatcagataccgagtttt 162006  T

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Target: scaffold1175 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 2514 - 2426
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| |||||||   ||||||||||||||||||||||||    
T  2514 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 66863 - 66951
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||| ||||||| |  ||||| |  ||| ||||||||| ||| ||||||| | |||||| |||||||||||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 32397 - 32484
Alignment:
Q  89 ttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctctctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||||||| |||||||||| ||||| |  ||||| || ||| ||||||||| ||| ||||||| ||| ||||| ||||||||||||||||    
T  32397 ttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttga-tcggataccgagtttt 32484  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 53112 - 53145
Alignment:
Q  50 ctctggtaccaatttcgatggacaagtacataca 83  Q
    ||||||||||||||||||||||||||| ||||||    
T  53112 ctctggtaccaatttcgatggacaagtccataca 53145  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 1191 - 1057
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||  ||||||||| ||| | |||| ||||||| |||| ||||| |||||||||||||||| |  |||||    ||| ||||||||| |    
T  1191 tcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccc 1093  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  1092 tcgaattagtcgattcttg-atcggataccgagtttt 1057  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 9434 - 9300
Alignment:
Q  42 tcgattcactctggtaccaatttcgatggac-aagtacatacagtgctttgctctagctttaaatggggcccacaaaagtgagtagtgagattggtcctc 140  Q
    ||||||| ||||||  ||||||||| ||| | |||| ||||||| |||| ||||| |||||||||||||||| |  |||||    ||| ||||||||| |    
T  9434 tcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccc 9336  T
Q  141 tctgattagttgatccttgaatcggataccgagtttt 177  Q
    ||  |||||| ||| |||| |||||||||||||||||    
T  9335 tcgaattagtcgattcttg-atcggataccgagtttt 9300  T

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