View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5762_low_7 (Length: 342)
Name: NF5762_low_7
Description: NF5762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5762_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 14 - 324
Target Start/End: Original strand, 1608422 - 1608732
Alignment:
| Q |
14 |
agataaactgtcaatgcaaagaacaggagaagtttaacatttttgcaacaaaatatcaaattttgcacagatatattctttctgacttcatcaaactcca |
113 |
Q |
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| T |
1608422 |
agataaactgtcaatgcaaagaacaggagaagtttaacttttttgcaacaaaatatcaaattttgcacagatatattctttctgacttcatcaaactcca |
1608521 |
T |
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| Q |
114 |
atcttgagtagtaaagaaaatacatttgtgacaaacatacatgtctaaatcaactaaaccacataagccctttaccctagaatttaatttgaatcatcgc |
213 |
Q |
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| T |
1608522 |
attttgagtagtaaagaaaatacatttgtgacaaacatacatgcctaaatcaactaaaccacataagccctttaccctagaatttaatttgaatcatcac |
1608621 |
T |
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| Q |
214 |
aaactatcataagcaaaatgagctaaaatgttgaacctttatgcattggaagccggtaaccatagcattgtcacttacaccatcactgctatgactaacc |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1608622 |
aaactatcataagcaaaatgagctaaaatgttgaacctttatgcattggaagccggtaaccatagcattgtcacttacaccatcactgctatgactaacc |
1608721 |
T |
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| Q |
314 |
atcactaaggg |
324 |
Q |
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||||||||||| |
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| T |
1608722 |
atcactaaggg |
1608732 |
T |
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