View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5763_high_2 (Length: 478)
Name: NF5763_high_2
Description: NF5763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5763_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 286 - 462
Target Start/End: Complemental strand, 42597286 - 42597116
Alignment:
| Q |
286 |
atttgaactcataggtccatgcatgcacaataattcaacctcttgattatatcaatttttctagaacatcaaagctaattagttaaagataagaacaaca |
385 |
Q |
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| T |
42597286 |
atttgaactcataggtccatgcatgcacaataattcaacctc------atatcaatttttctagaacatcaaagctaattagttaaagataagaacaaca |
42597193 |
T |
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| Q |
386 |
tttaacaaaagaaaccacgtatccgtcaaatgtttggaaatttggaaatgaggatgaaaaaagctatgaccgttttg |
462 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42597192 |
tttaacaaaagaaaccacgtatccgtcaaatgtttggaaatttggaaatgaggatgaaaaaagctatgaccgttttg |
42597116 |
T |
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