View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5763_high_7 (Length: 344)
Name: NF5763_high_7
Description: NF5763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5763_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 36 - 329
Target Start/End: Complemental strand, 1251646 - 1251353
Alignment:
| Q |
36 |
ggataaattaagacatatccatgtgtagtatatgttaaaggggttgcattgattgtttgtagtaatactcaccataattcttgttgatgtaatttgggct |
135 |
Q |
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| T |
1251646 |
ggataaattaagacatatccatgtgtagtatatgttaaaggggttgcattgattgtttgtagtaatactcaccataattcttgttgatgtaatttgggct |
1251547 |
T |
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| Q |
136 |
atgatttcttatgatggaaaccaagttttggtttggaggaaagacnnnnnnnnnnnnngaactttcaatatcttagtaatttgtagagaggaattgaaga |
235 |
Q |
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| T |
1251546 |
atgatttcttatgatggaaaccaagttttggtttggaggaaaggaaaaaagaaaaaaagaactttcaatatcttagtaatttgtagagaggaattgaaga |
1251447 |
T |
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| Q |
236 |
gagaaagtaaagctagtgtttaatattgttttggtcttattcaaaaagtctacaaccaaacctaactccaaagccaaaccaaagaggaattgtt |
329 |
Q |
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| T |
1251446 |
gagaaagtaaagctagtgtttaatattgttttggtcttattcaaaaagtctacaaccaaacctaactccaaagccaaaccaaagaggaattgtt |
1251353 |
T |
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