View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5763_low_24 (Length: 264)
Name: NF5763_low_24
Description: NF5763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5763_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 32483534 - 32483364
Alignment:
| Q |
81 |
gctgatagatatgaaatatggtggagattttaagcttgaacataaacacacgcaatcgatacggttggattgttagcagatatagttccaaaactatgtc |
180 |
Q |
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| T |
32483534 |
gctgatagatatgaaatatggtggagattttaagcttgaacataaacacacgcaatcgatacggttggattgttagcagatatagttccaaaactatgtc |
32483435 |
T |
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| Q |
181 |
atcagtatttggctatctttttcagagaattcctctaaaccaaaagattctctctttgtttttgctttcct |
251 |
Q |
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| T |
32483434 |
atcagtatttggctatctttttcagagaattcctctaaaccaaaagattctctctttgtatttgctttcct |
32483364 |
T |
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