View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5763_low_32 (Length: 234)
Name: NF5763_low_32
Description: NF5763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5763_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 32483758 - 32483959
Alignment:
| Q |
13 |
tagattattctagaatattaattgcctgctatagctatagcataaatttttgcattctgttgtattgtcaaggttaactaattaacatagtcaaataata |
112 |
Q |
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| T |
32483758 |
tagattattctagaatattaattgcttgctatagctatagcataaatttttgcattctgttgtattgtcgaggttaattaattaacatagtcaaataata |
32483857 |
T |
|
| Q |
113 |
ttatacaatatatgtctaatgacttttttgttttgttaaaaaataaaggcttagaggaagcaaattttcctgctgtggtaagctcaccagcggagttcag |
212 |
Q |
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| T |
32483858 |
ttatacaatatatgtctaatgacttttttgttttgttaaaaaataaaggcttagaggaagcaaattttcctgctgtggtaagctcaccagcggagttcag |
32483957 |
T |
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| Q |
213 |
gt |
214 |
Q |
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| T |
32483958 |
gt |
32483959 |
T |
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