View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5765_low_3 (Length: 350)

Name: NF5765_low_3
Description: NF5765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5765_low_3
NF5765_low_3
[»] chr8 (28 HSPs)
chr8 (17-340)||(14540758-14541081)
chr8 (282-336)||(12615370-12615424)
chr8 (282-336)||(16383737-16383791)
chr8 (282-336)||(32551410-32551464)
chr8 (282-336)||(33303593-33303647)
chr8 (282-336)||(26241532-26241586)
chr8 (282-336)||(36684927-36684981)
chr8 (290-336)||(23950532-23950578)
chr8 (254-336)||(36054458-36054540)
chr8 (282-336)||(36918818-36918872)
chr8 (254-333)||(30577233-30577315)
chr8 (290-333)||(10962588-10962631)
chr8 (290-336)||(10921333-10921379)
chr8 (58-104)||(11989039-11989085)
chr8 (290-332)||(11989295-11989337)
chr8 (290-336)||(32415198-32415244)
chr8 (259-325)||(43854397-43854463)
chr8 (295-336)||(12939428-12939469)
chr8 (58-142)||(26241277-26241361)
chr8 (286-338)||(42643348-42643400)
chr8 (51-98)||(40680352-40680399)
chr8 (259-325)||(43853442-43853508)
chr8 (58-98)||(14921376-14921416)
chr8 (58-98)||(16383975-16384015)
chr8 (58-98)||(36684682-36684722)
chr8 (58-98)||(38600901-38600941)
chr8 (54-98)||(39506703-39506747)
chr8 (58-98)||(44755554-44755594)
[»] chr7 (31 HSPs)
chr7 (259-336)||(32670162-32670239)
chr7 (201-336)||(44980476-44980608)
chr7 (282-336)||(2732545-2732599)
chr7 (282-336)||(11410776-11410830)
chr7 (282-336)||(14776020-14776074)
chr7 (282-336)||(15942924-15942978)
chr7 (282-336)||(34521071-34521125)
chr7 (282-336)||(29977019-29977073)
chr7 (170-322)||(35516332-35516482)
chr7 (284-332)||(37807215-37807263)
chr7 (254-336)||(18533176-18533261)
chr7 (254-336)||(48214290-48214375)
chr7 (290-336)||(1411334-1411380)
chr7 (290-336)||(12077414-12077460)
chr7 (290-336)||(3357203-3357249)
chr7 (290-336)||(8485721-8485767)
chr7 (254-336)||(25076765-25076847)
chr7 (290-336)||(36820743-36820789)
chr7 (290-336)||(41399545-41399591)
chr7 (290-336)||(41892389-41892435)
chr7 (58-142)||(15943149-15943233)
chr7 (58-98)||(21806510-21806550)
chr7 (290-336)||(4068120-4068166)
chr7 (278-336)||(24421744-24421802)
chr7 (58-95)||(36820944-36820981)
chr7 (58-98)||(2732300-2732340)
chr7 (58-98)||(3356970-3357010)
chr7 (58-98)||(11410531-11410571)
chr7 (58-98)||(12419227-12419267)
chr7 (58-98)||(13391064-13391104)
chr7 (58-98)||(14776257-14776297)
[»] scaffold1625 (1 HSPs)
scaffold1625 (282-336)||(1444-1498)
[»] scaffold0129 (2 HSPs)
scaffold0129 (282-336)||(41154-41208)
scaffold0129 (58-142)||(40910-40994)
[»] scaffold0037 (1 HSPs)
scaffold0037 (282-336)||(81155-81209)
[»] chr6 (26 HSPs)
chr6 (282-336)||(3257379-3257433)
chr6 (282-336)||(24012159-24012213)
chr6 (184-336)||(33627756-33627906)
chr6 (282-336)||(3027099-3027153)
chr6 (282-336)||(4111199-4111253)
chr6 (254-336)||(5153543-5153628)
chr6 (290-336)||(13276826-13276872)
chr6 (290-336)||(14610459-14610505)
chr6 (290-336)||(23646067-23646113)
chr6 (282-336)||(27613530-27613584)
chr6 (290-336)||(28890720-28890766)
chr6 (293-336)||(12296736-12296779)
chr6 (290-336)||(3728864-3728910)
chr6 (58-98)||(32187358-32187398)
chr6 (290-333)||(8437404-8437447)
chr6 (290-333)||(24849133-24849176)
chr6 (51-101)||(33042785-33042835)
chr6 (58-98)||(479253-479293)
chr6 (58-98)||(1101198-1101238)
chr6 (58-98)||(3027358-3027398)
chr6 (58-98)||(3729126-3729166)
chr6 (58-98)||(4111458-4111498)
chr6 (58-98)||(5153326-5153366)
chr6 (58-98)||(13276570-13276610)
chr6 (58-98)||(28890982-28891022)
chr6 (254-333)||(31802931-31803013)
[»] chr5 (24 HSPs)
chr5 (282-336)||(491484-491538)
chr5 (286-336)||(9163675-9163725)
chr5 (282-336)||(42062121-42062175)
chr5 (254-336)||(7035367-7035451)
chr5 (254-336)||(7079195-7079280)
chr5 (282-336)||(12784783-12784837)
chr5 (290-336)||(31271245-31271291)
chr5 (290-336)||(42288319-42288365)
chr5 (254-332)||(4101406-4101487)
chr5 (289-336)||(10931856-10931903)
chr5 (254-336)||(14084281-14084366)
chr5 (282-336)||(12723300-12723354)
chr5 (290-332)||(32298462-32298504)
chr5 (192-336)||(24510219-24510361)
chr5 (282-334)||(14273583-14273635)
chr5 (58-142)||(42062336-42062420)
chr5 (55-98)||(12880466-12880509)
chr5 (290-332)||(6643985-6644027)
chr5 (290-336)||(12880708-12880754)
chr5 (292-332)||(964627-964667)
chr5 (58-98)||(9163438-9163478)
chr5 (58-98)||(10017773-10017813)
chr5 (58-98)||(14949598-14949638)
chr5 (58-98)||(40083993-40084033)
[»] chr4 (33 HSPs)
chr4 (282-336)||(10010683-10010737)
chr4 (282-336)||(37010822-37010876)
chr4 (282-336)||(38307888-38307942)
chr4 (282-336)||(40730253-40730307)
chr4 (282-336)||(47691833-47691887)
chr4 (282-336)||(48826255-48826309)
chr4 (254-336)||(52225479-52225564)
chr4 (290-336)||(9627752-9627798)
chr4 (290-336)||(20039467-20039513)
chr4 (192-336)||(23370610-23370753)
chr4 (254-336)||(32212413-32212494)
chr4 (290-336)||(39787496-39787542)
chr4 (290-336)||(41324224-41324270)
chr4 (254-336)||(8753600-8753685)
chr4 (254-336)||(11845196-11845281)
chr4 (290-336)||(7363349-7363395)
chr4 (290-332)||(48801053-48801095)
chr4 (290-333)||(23106198-23106241)
chr4 (51-98)||(36488774-36488821)
chr4 (290-333)||(41487710-41487753)
chr4 (58-101)||(46903964-46904007)
chr4 (222-336)||(25040001-25040116)
chr4 (254-322)||(16711970-16712041)
chr4 (58-98)||(3097938-3097978)
chr4 (54-98)||(9627492-9627536)
chr4 (58-98)||(11845429-11845469)
chr4 (300-336)||(14599240-14599276)
chr4 (58-98)||(17981373-17981413)
chr4 (54-98)||(20393000-20393044)
chr4 (58-98)||(29590545-29590585)
chr4 (58-98)||(38308147-38308187)
chr4 (58-98)||(40730512-40730552)
chr4 (58-98)||(48826010-48826050)
[»] chr3 (48 HSPs)
chr3 (282-336)||(19421195-19421249)
chr3 (282-336)||(34705116-34705170)
chr3 (282-336)||(39391305-39391359)
chr3 (282-336)||(40000350-40000404)
chr3 (282-336)||(40000596-40000650)
chr3 (259-336)||(24540820-24540897)
chr3 (282-336)||(29077097-29077151)
chr3 (254-336)||(34636542-34636624)
chr3 (254-336)||(33069248-33069333)
chr3 (254-336)||(47596898-47596983)
chr3 (290-336)||(1782498-1782544)
chr3 (286-336)||(25537192-25537242)
chr3 (290-336)||(33249678-33249724)
chr3 (290-336)||(40488859-40488905)
chr3 (290-336)||(52174619-52174665)
chr3 (290-336)||(54650707-54650753)
chr3 (184-336)||(36672652-36672802)
chr3 (280-336)||(35639352-35639408)
chr3 (292-336)||(46116683-46116727)
chr3 (58-142)||(47597116-47597200)
chr3 (254-336)||(34422480-34422565)
chr3 (254-332)||(39171258-39171339)
chr3 (254-336)||(47844727-47844812)
chr3 (290-336)||(13596400-13596446)
chr3 (290-336)||(28793914-28793960)
chr3 (290-332)||(46068252-46068294)
chr3 (290-336)||(53002407-53002453)
chr3 (58-142)||(34705341-34705425)
chr3 (290-333)||(33370646-33370689)
chr3 (254-336)||(46181681-46181766)
chr3 (254-336)||(55008318-55008403)
chr3 (290-332)||(18984108-18984150)
chr3 (290-332)||(20647613-20647655)
chr3 (290-332)||(41873648-41873690)
chr3 (58-98)||(1782760-1782800)
chr3 (58-98)||(4357098-4357138)
chr3 (58-98)||(9338336-9338376)
chr3 (58-98)||(13596171-13596211)
chr3 (58-98)||(19420972-19421012)
chr3 (54-98)||(20647871-20647915)
chr3 (54-98)||(28793654-28793698)
chr3 (58-98)||(29076874-29076914)
chr3 (300-336)||(30825092-30825128)
chr3 (58-98)||(39391060-39391100)
chr3 (58-98)||(39889331-39889371)
chr3 (58-98)||(40000855-40000895)
chr3 (201-336)||(40459119-40459252)
chr3 (58-98)||(40489121-40489161)
[»] chr2 (27 HSPs)
chr2 (282-336)||(13028943-13028997)
chr2 (282-336)||(34726149-34726203)
chr2 (282-336)||(40738065-40738119)
chr2 (282-336)||(36983100-36983154)
chr2 (290-336)||(5936604-5936650)
chr2 (290-336)||(12033637-12033683)
chr2 (290-336)||(39133499-39133545)
chr2 (254-336)||(21197948-21198033)
chr2 (254-336)||(27670569-27670654)
chr2 (290-336)||(17852580-17852626)
chr2 (290-336)||(18075594-18075640)
chr2 (290-336)||(32083953-32083999)
chr2 (290-336)||(43616548-43616594)
chr2 (290-336)||(45261310-45261356)
chr2 (58-98)||(36985454-36985494)
chr2 (58-142)||(40737810-40737894)
chr2 (290-333)||(43999470-43999513)
chr2 (58-98)||(2995117-2995157)
chr2 (58-98)||(13029180-13029220)
chr2 (58-98)||(21198210-21198250)
chr2 (58-98)||(29044115-29044155)
chr2 (58-98)||(29557425-29557465)
chr2 (58-98)||(29768300-29768340)
chr2 (58-98)||(34726399-34726439)
chr2 (58-98)||(35959339-35959379)
chr2 (58-98)||(38448106-38448146)
chr2 (58-98)||(44092882-44092922)
[»] chr1 (37 HSPs)
chr1 (282-336)||(18353325-18353379)
chr1 (282-336)||(19708778-19708832)
chr1 (282-336)||(33785459-33785513)
chr1 (282-336)||(34084202-34084256)
chr1 (282-336)||(39860277-39860331)
chr1 (260-336)||(8417460-8417539)
chr1 (290-336)||(2988917-2988963)
chr1 (290-336)||(13253509-13253555)
chr1 (290-336)||(13884418-13884464)
chr1 (290-336)||(17806074-17806120)
chr1 (290-336)||(52222991-52223037)
chr1 (254-336)||(24038451-24038536)
chr1 (254-336)||(45372596-45372681)
chr1 (290-336)||(3831736-3831782)
chr1 (282-332)||(12029160-12029210)
chr1 (290-336)||(31493254-31493300)
chr1 (290-336)||(46847024-46847070)
chr1 (58-98)||(6305034-6305074)
chr1 (58-142)||(19709003-19709087)
chr1 (254-336)||(6891167-6891252)
chr1 (254-336)||(31225396-31225481)
chr1 (254-336)||(32239123-32239208)
chr1 (58-101)||(44779548-44779591)
chr1 (254-332)||(44969256-44969337)
chr1 (254-336)||(50096854-50096939)
chr1 (291-336)||(14270041-14270086)
chr1 (290-331)||(18437365-18437406)
chr1 (290-331)||(18448223-18448264)
chr1 (290-331)||(18453316-18453357)
chr1 (58-98)||(5500034-5500074)
chr1 (58-98)||(8417237-8417277)
chr1 (58-98)||(17805823-17805863)
chr1 (58-98)||(19507067-19507107)
chr1 (58-98)||(33785204-33785244)
chr1 (58-98)||(39860536-39860576)
chr1 (58-98)||(39919614-39919654)
chr1 (58-98)||(52222735-52222775)
[»] scaffold0067 (1 HSPs)
scaffold0067 (290-336)||(14152-14198)
[»] scaffold0275 (1 HSPs)
scaffold0275 (58-98)||(9161-9201)
[»] scaffold0217 (1 HSPs)
scaffold0217 (254-336)||(15794-15879)
[»] scaffold0065 (1 HSPs)
scaffold0065 (290-336)||(40240-40286)
[»] scaffold0005 (1 HSPs)
scaffold0005 (300-336)||(218102-218138)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 17 - 340
Target Start/End: Complemental strand, 14541081 - 14540758
Alignment:
Q  17 cactccaaagccgtatgcaaatcatctgcttcatggatggaaataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  14541081 cactccaaagccgtatgcaaatcatctgcttcatggatggaaataggccaggccagaccatactttgataggtctgagcctgaccaactgaattttttgc 14540982  T
Q  117 aaacctgagtctgacctatggccttttgtagcctannnnnnnggtctagtttagcctaaaaacctagttacatgtctacttcaaattaaagtgattacat 216  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14540981 aaacctgagtttgacctatggccttttgtagcctatttttttggtctagtttagcctaaaaacctagttacaggtctacttcaaattaaagtgattacat 14540882  T
Q  217 agtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttca 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14540881 agtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttca 14540782  T
Q  317 ctataaggctttaaagcctaatga 340  Q
    ||||||||||||||||||||||||    
T  14540781 ctataaggctttaaagcctaatga 14540758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 12615370 - 12615424
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  12615370 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 12615424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 16383791 - 16383737
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  16383791 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 16383737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 32551464 - 32551410
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  32551464 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 32551410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 33303647 - 33303593
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  33303647 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 33303593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 26241532 - 26241586
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  26241532 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaaaccta 26241586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 36684927 - 36684981
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  36684927 tgtctatcactataaggccttaaaaacatatttcattataaagctttaaagccta 36684981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 23950532 - 23950578
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23950532 actataaggccttaaaagcctatttcactataaagctttaaagccta 23950578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 36054540 - 36054458
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | |||||||| |||||||||||||||||  |||||||||||||  ||||||||||||    
T  36054540 gcctcaaagcctatttcagtgtaagacttgtctatctctataaggccttaaaagtctatttcactataaaactttaaagccta 36054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 36918818 - 36918872
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  36918818 tgtctatcactataaggctttaaaagcctatttcactataaggccttagagccta 36918872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 30577233 - 30577315
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| ||||||||||    
T  30577233 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaagc 30577315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 10962588 - 10962631
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  10962588 actataaggccttaaaagcctatttcactataaagctttaaagc 10962631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 10921333 - 10921379
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||||    
T  10921333 actatatggccttaaaagcctatttcactataaagctttaaagccta 10921379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 11989039 - 11989085
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaac 104  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  11989039 aataggccaggccaggccatgctttgataggcctgagcctggccaac 11989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 11989295 - 11989337
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  11989295 actataaggccttaaaagcttatttcactataaagctttaaag 11989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 32415244 - 32415198
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||    
T  32415244 actataaggccttaaaagcctatttcactataaaactttaaagccta 32415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 43854463 - 43854397
Alignment:
Q  259 aaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggc 325  Q
    |||| |||||||| | || ||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  43854463 aaagtctatttcattgtaaggcatatctagaactataaggccttaaaaacatatttcactataaggc 43854397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 12939428 - 12939469
Alignment:
Q  295 aaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  12939428 aaggccttaaaagcttatttcactataaggccttaaagccta 12939469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 26241277 - 26241361
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  26241277 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 26241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 42643348 - 42643400
Alignment:
Q  286 tatcactataaggccttaaaagcatatttcactataaggctttaaagcctaat 338  Q
    ||||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  42643348 tatcactttaagaccttaaaagtatatttcactataaggtattaaagcctaat 42643400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 40680352 - 40680399
Alignment:
Q  51 ggatggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  40680352 ggatggaaataggccaggtcagaccaggctatgataggcctgagcctg 40680399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 43853508 - 43853442
Alignment:
Q  259 aaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggc 325  Q
    |||| |||||||| | || ||||| ||||  |||||||| ||||||||||||||||||| |||||||    
T  43853508 aaagtctatttcattgtaaggcatatctagaactataagaccttaaaagcatatttcacaataaggc 43853442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 14921376 - 14921416
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  14921376 aataggccaggccaggccaggctttgataggcctgagcctg 14921416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 16384015 - 16383975
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  16384015 aataggccaggccaggccaggctttgataggcctgagcctg 16383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 36684682 - 36684722
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  36684682 aataggccaggccaggccacgctttgataggcctgagcctg 36684722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 38600941 - 38600901
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  38600941 aataggccaggccaggccaggctttgataggcctgagcctg 38600901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 39506747 - 39506703
Alignment:
Q  54 tggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||||||||  |||||| ||| |||||||||    
T  39506747 tggaaataggccaggccagaccagactttgaaaggcctgagcctg 39506703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 44755554 - 44755594
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  44755554 aataggccaggccaggccaggctttgataggcctgagcctg 44755594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 32670239 - 32670162
Alignment:
Q  259 aaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||| | || | | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32670239 aaagcctatttcagtgtaagacttgtctatcactataaggccttaaaagcctatttcactataaagctttaaagccta 32670162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 336
Target Start/End: Complemental strand, 44980608 - 44980476
Alignment:
Q  201 attaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcactataaggcc 300  Q
    |||||||| ||||||||||| |||||||||||||| |||  ||  | ||||  |||| |||||||||| || | || ||| ||||||||||| |||||||    
T  44980608 attaaagtcattacatagtccattttatctacttctaaa--taggctaaatcggccttaaagcctatt-cactgtaaggcttgtctatcactgtaaggcc 44980512  T
Q  301 ttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||| | ||||||||| |||||||||||||||||    
T  44980511 ttaaaaacctatttcactgtaaggctttaaagccta 44980476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 2732545 - 2732599
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2732545 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 2732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 11410776 - 11410830
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11410776 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 11410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 14776074 - 14776020
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14776074 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 14776020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 15942978 - 15942924
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  15942978 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 15942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 34521125 - 34521071
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  34521125 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 34521071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 29977073 - 29977019
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  29977073 tgtctatcactataaggtcttaaaaacatatttcactataaggccttaaagccta 29977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 35516482 - 35516332
Alignment:
Q  170 gcctaaaaacctagttacatgtctacttcaaattaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctattt 269  Q
    |||| ||| |||| ||||| | |||||| | |||||||| |||| ||| |||||||| | |||||| ||| || |  ||||||  ||| |||||||||||    
T  35516482 gcctgaaagcctatttacaggcctactttatattaaagtcattaaatattcaattttgtatacttctaaatatgc--caaattgaccttaaagcctattt 35516385  T
Q  270 caatatatggcatgtctatcactataaggccttaaaagcatatttcactataa 322  Q
    ||   || |||||||||||| |||||||||||||||||| ||||||| |||||    
T  35516384 caccgtaaggcatgtctatcgctataaggccttaaaagcctatttcattataa 35516332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 37807215 - 37807263
Alignment:
Q  284 tctatcactataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  37807215 tctatcactataaggccttaaaagcctatttcactataaagctttaaag 37807263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 18533261 - 18533176
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatca---ctataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | |||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||    
T  18533261 gcctcaaagcctatttcagtgtaagacttgtctatcattactataaggccttaaaagcctatttcactataaagctttaaagccta 18533176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 48214290 - 48214375
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  48214290 gcctcaaagcctatttcagtgtaagacttgtctatcactacaataaggccttaaaagcctatttcactataaagctttaaagccta 48214375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 1411380 - 1411334
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1411380 actataaggccttaaaagcctatttcactataaagctttaaagccta 1411334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 12077414 - 12077460
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12077414 actataaggccttaaaagcctatttcactataaagctttaaagccta 12077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 3357203 - 3357249
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  3357203 actataaggccttaaaagcctatttcactataaagttttaaagccta 3357249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 8485767 - 8485721
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  8485767 actataaggccttaaaagcctatttcactataaagctttaaaaccta 8485721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 25076847 - 25076765
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| |||||||||||||  ||| | | ||||||||||||||||||| ||||| | ||||||||| |||| | ||||||||||    
T  25076847 gccttaaagcctatttcacaataagacttgtctatcactataaggccctaaaaacctatttcactgtaagaccttaaagccta 25076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 36820789 - 36820743
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||    
T  36820789 actataaggccttaaaagcctatttcaccataaagctttaaagccta 36820743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 41399591 - 41399545
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  41399591 actataaggccttaaaagcctatttcactataaagctttaaatccta 41399545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 41892389 - 41892435
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  41892389 actataaggccttaaaagtctatttcactataaagctttaaagccta 41892435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 15943233 - 15943149
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  15943233 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 15943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 21806510 - 21806550
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  21806510 aataggccaggccagaccaggctttgataggcctgagcctg 21806550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 4068120 - 4068166
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  4068120 actataaggccttaaaagtctatttcactataaagctttaaaaccta 4068166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 24421802 - 24421744
Alignment:
Q  278 ggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||| |||||  |||||||| ||||||||| |||||||||||||||| | ||||||||    
T  24421802 ggcatatctattgctataaggtcttaaaagcttatttcactataaggcctcaaagccta 24421744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 36820981 - 36820944
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagc 95  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  36820981 aataggccaggccagaccaggctttgataggcctgagc 36820944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 2732300 - 2732340
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  2732300 aataggccaggccaggccaggctttgataggcctgagcctg 2732340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 3356970 - 3357010
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  3356970 aataggccaggccaggccaggctttgataggcctgagcctg 3357010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 11410531 - 11410571
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  11410531 aataggccaggccaggccaggctttgataggcctgagcctg 11410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 12419267 - 12419227
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  12419267 aataggccaggccaggccaggctttgataggcctgagcctg 12419227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 13391064 - 13391104
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  13391064 aataggccaggccaggccaggctttgataggcctgagcctg 13391104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 14776297 - 14776257
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  14776297 aataggccaggccaggccaggctttgataggcctgagcctg 14776257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 1444 - 1498
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1444 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 1498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 41154 - 41208
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41154 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 41208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 40910 - 40994
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  40910 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 40994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 81209 - 81155
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  81209 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 81155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 3257379 - 3257433
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  3257379 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 3257433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 24012159 - 24012213
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  24012159 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 24012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 33627906 - 33627756
Alignment:
Q  184 ttacatgtctacttcaaattaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatg 283  Q
    |||||||||||||||| |||||||| |||| ||| |||||||| | |||||  | |||||   |||||| |||| |||||||||||||   ||  |||||    
T  33627906 ttacatgtctacttcatattaaagttattatatattcaattttgtatactt--ataaataggtcaaattagccttaaagcctatttcatcgtaacgcatg 33627809  T
Q  284 tctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||  ||||||||| |||||||| ||||| |||||||||| | ||||||||    
T  33627808 tctattgctataaggctttaaaagcctattttactataaggcctcaaagccta 33627756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 3027153 - 3027099
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  3027153 tgtctatcactataaggccttaaaaacatatttcattataaagctttaaagccta 3027099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 4111253 - 4111199
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  4111253 tgtctatcactataaggccttaaaaacatatttcattataaagctttaaagccta 4111199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 5153543 - 5153628
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  5153543 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaagccta 5153628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 13276826 - 13276872
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13276826 actataaggccttaaaagcctatttcactataaagctttaaagccta 13276872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 14610505 - 14610459
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14610505 actataaggccttaaaagcctatttcactataaagctttaaagccta 14610459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 23646067 - 23646113
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23646067 actataaggccttaaaagcctatttcactataaagctttaaagccta 23646113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 27613530 - 27613584
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||    
T  27613530 tgtctatcactataaggccttaaaagcttattttactataatgatttaaagccta 27613584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 28890766 - 28890720
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28890766 actataaggccttaaaagcctatttcactataaagctttaaagccta 28890720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 12296779 - 12296736
Alignment:
Q  293 ataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  12296779 ataaggccttaaaagcctatttcactataaagctttaaagccta 12296736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 3728910 - 3728864
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||    
T  3728910 actataaggccttaaaagccaatttcactataaagctttaaagccta 3728864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 32187398 - 32187358
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  32187398 aataggccaggccaggccatgctttgataggcctgagcctg 32187358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 8437447 - 8437404
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  8437447 actataaggccttaaaagcctatttcactataaagttttaaagc 8437404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 24849133 - 24849176
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| |||||||||||||  |||||||||    
T  24849133 actataaggccttaaaagcctatttcactataaaactttaaagc 24849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 33042785 - 33042835
Alignment:
Q  51 ggatggaaataggccaggccagaccatgctttgataggtctgagcctgacc 101  Q
    |||||| |||||||||||||| |||| | ||||||||| ||||||||||||    
T  33042785 ggatgggaataggccaggccaaaccaggttttgataggcctgagcctgacc 33042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 479293 - 479253
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||| |||||||||||| ||||||||||| |||||||||    
T  479293 aataggtcaggccagaccaggctttgataggcctgagcctg 479253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 1101198 - 1101238
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  1101198 aataggccaggccaggccaggctttgataggcctgagcctg 1101238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 3027398 - 3027358
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  3027398 aataggccaggccaggccaggctttgataggcctgagcctg 3027358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 3729166 - 3729126
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  3729166 aataggccaggccaggccaggctttgataggcctgagcctg 3729126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 4111498 - 4111458
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  4111498 aataggccaggccaggccaggctttgataggcctgagcctg 4111458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 5153326 - 5153366
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||| |||||||||||    
T  5153326 aataggccaggccaggccaggctttgataagtctgagcctg 5153366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 13276570 - 13276610
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  13276570 aataggccaggccaggccaggctttgataggcctgagcctg 13276610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 28891022 - 28890982
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  28891022 aataggccaggccaggccaggctttgataggcctgagcctg 28890982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 31803013 - 31802931
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    |||| ||||||||||||| | || | | ||||||||||||   | ||||||||||||| ||||||||| ||| ||||||||||    
T  31803013 gcctcaaagcctatttcagtgtaagacttgtctatcactactattaggccttaaaagcttatttcactctaaagctttaaagc 31802931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 491484 - 491538
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  491484 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 491538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 9163675 - 9163725
Alignment:
Q  286 tatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  9163675 tatcactataaggccttaaaagcctatttcactataatgctttaaagccta 9163725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 42062175 - 42062121
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  42062175 tgtctatcactataaggccttaaaagcctatttcaccataatgctttaaagccta 42062121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 7035367 - 7035451
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactata--aggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||    
T  7035367 gcctcaaagcctatttcagtgtaagacttgtctatcactatataaggccttaaaagcctatttcactataaagctttaaagccta 7035451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 7079195 - 7079280
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| |||| |||||||||| || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  7079195 gcctcaaagactatttcaatgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaagccta 7079280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 12784837 - 12784783
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||    
T  12784837 tgtctatcactataaggccttaaaagcctatttgactacaaggccttaaagccta 12784783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 31271291 - 31271245
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  31271291 actataaggccttaaaagcctatttcactataaagctttaaagccta 31271245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 42288365 - 42288319
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  42288365 actataaggccttaaaagcctatttcactataaagctttaaagccta 42288319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 4101406 - 4101487
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaag 332  Q
    |||| ||| ||||||||||| || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||    
T  4101406 gcctcaaaacctatttcaatgtacgacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaag 4101487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 10931856 - 10931903
Alignment:
Q  289 cactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||    
T  10931856 cactataaggccttaaaaacctatttcactataaagctttaaagccta 10931903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 14084366 - 14084281
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   |||| |||||||||| ||||||||||||| |||||||||||||    
T  14084366 gcctcaaagcctatttcagtgtaagacttgtctatcactactataagaccttaaaagcctatttcactataaagctttaaagccta 14084281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 12723354 - 12723300
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||| ||||||||| ||||| |||| ||||| ||||||||||    
T  12723354 tgtctatcactataaggtcttaaaagcctatttgactacaaggccttaaagccta 12723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 32298504 - 32298462
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  32298504 actataaggccttaaaagcctatttcactataaagctttaaag 32298462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 24510219 - 24510361
Alignment:
Q  192 ctacttcaaattaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcac 291  Q
    |||||| | |||||||| |||| ||| |||||||| |||||||| |||  ||  | ||||| | || |||||||||||||   || |||||||||||  |    
T  24510219 ctacttgatattaaagtcattaaatattcaattttgtctacttctaaa--taggctaaattggtcttaaagcctatttcaccgtaaggcatgtctattgc 24510316  T
Q  292 tataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||| || ||||| |||||||||| | ||||||||    
T  24510317 tatatggccttaaaggcctatttgactataaggcctcaaagccta 24510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 14273583 - 14273635
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagcc 334  Q
    ||||||||||||||||||||||||||  ||||||| |||||||  ||||||||    
T  14273583 tgtctatcactataaggccttaaaagtctatttcattataaggtcttaaagcc 14273635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 42062420 - 42062336
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  42062420 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 42062336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 12880466 - 12880509
Alignment:
Q  55 ggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||    
T  12880466 ggaaataggccaggccaggccaggctttgataggcctgagcctg 12880509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 6644027 - 6643985
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||    
T  6644027 actatgaggccttaaaagcctatttcactataaagctttaaag 6643985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 12880708 - 12880754
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  12880708 actataaggtcttaaaagcctatttcactataaaactttaaagccta 12880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 964627 - 964667
Alignment:
Q  292 tataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
T  964627 tataaggccttaaaagcctatttcactacaaggccttaaag 964667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 9163438 - 9163478
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  9163438 aataggccaggccaggccaggctttgataggcctgagcctg 9163478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 10017773 - 10017813
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  10017773 aataggccaggccaggccaggctttgataggcctgagcctg 10017813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 14949638 - 14949598
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||| |||||||| ||| |||||||||||||||||||||    
T  14949638 aataggtcaggccaggccaggctttgataggtctgagcctg 14949598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 40083993 - 40084033
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  40083993 aataggccaggccaggccaggctttgataggcctgagcctg 40084033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10010737 - 10010683
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  10010737 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 10010683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 37010876 - 37010822
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  37010876 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 37010822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 38307942 - 38307888
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  38307942 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 38307888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 40730307 - 40730253
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  40730307 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 40730253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 47691833 - 47691887
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  47691833 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 47691887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 48826255 - 48826309
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  48826255 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 48826309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 52225564 - 52225479
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||||| || | | ||||||||||||   ||||||||||||||| ||||||||||||| | |||||||||||    
T  52225564 gcctcaaagcctatttcaatctaagacttgtctatcactactataaggccttaaaagcctatttcactataaagttttaaagccta 52225479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 9627752 - 9627798
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  9627752 actataaggccttaaaagcctatttcactataaagctttaaagccta 9627798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 20039513 - 20039467
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  20039513 actataaggccttaaaagcctatttcactataaagctttaaagccta 20039467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 23370610 - 23370753
Alignment:
Q  192 ctacttcaaattaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcac 291  Q
    |||||||| |||||| | |||| | | |||||||| |||||||| |||  ||  ||||||| |||| |||||||||||||   || | |||||||||  |    
T  23370610 ctacttcatattaaaatcattaaacattcaattttgtctacttctaaa--taggccaaattggccttaaagcctatttcatcgtaagacatgtctattgc 23370707  T
Q  292 tataaggccttaaaa-gcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||    
T  23370708 tataaggccttaaaaagcctatttcactataaggcctcaaagccta 23370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 32212413 - 32212494
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||| ||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  32212413 gcctcaaagcctatttcagtgtaagacttgtttatcactataaggccttaaaagcctatttcactataaagc-ttaaagccta 32212494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 39787542 - 39787496
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  39787542 actataaggccttaaaagcctatttcactataaagctttaaagccta 39787496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 41324270 - 41324224
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41324270 actataaggccttaaaagcctatttcactataaagctttaaagccta 41324224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 8753685 - 8753600
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||||| || | | ||||||||||||   ||||||||||||||| |||||||||||||  ||||||| ||||    
T  8753685 gcctcaaagcctatttcaatgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaaactttaaaaccta 8753600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 11845281 - 11845196
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||| ||||    
T  11845281 gcctcaaagcctatttcagtctaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaaaccta 11845196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 7363395 - 7363349
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  7363395 actataaggtcttaaaagcctatttcactataaagctttaaagccta 7363349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 48801095 - 48801053
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  48801095 actataaggccttaaaagcctatttcactataaagctttaaag 48801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 23106241 - 23106198
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  23106241 actataaggccttaaaagcctatttcactataaagttttaaagc 23106198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 36488774 - 36488821
Alignment:
Q  51 ggatggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||||    
T  36488774 ggatgggaataggccaggccaggccagactttgataggtctgagcctg 36488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 41487710 - 41487753
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  41487710 actataaggccttaaaagcctatttaactataaagctttaaagc 41487753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 46904007 - 46903964
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgacc 101  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||    
T  46904007 aatagaccaggccaggccatgctttgataggcctgagcctgacc 46903964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 336
Target Start/End: Complemental strand, 25040116 - 25040001
Alignment:
Q  222 attttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcactataa----ggccttaaaagcatatttcac 317  Q
    |||||||||||||| |||  ||  ||||||| |||| |||||||||||||   || | | |||||||||||||||    |||| ||||| ||||||||||    
T  25040116 attttatctacttctaaa--taggccaaattggccttaaagcctatttcaccgtaagacttgtctatcactataattaaggccctaaaa-catatttcac 25040020  T
Q  318 tataaggctttaaagccta 336  Q
    |||||||| ||||||||||    
T  25040019 tataaggccttaaagccta 25040001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 16711970 - 16712041
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataa 322  Q
    |||| |||| |||||||| |||| | | ||||||||||||   ||||||||||||||| |||||||||||||    
T  16711970 gcctcaaagtctatttcagtataagacttgtctatcactactataaggccttaaaagcctatttcactataa 16712041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 3097978 - 3097938
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  3097978 aataggccaggccaggccaggctttgataggcctgagcctg 3097938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 9627492 - 9627536
Alignment:
Q  54 tggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  9627492 tggaaataggccaggtcaggccaggctttgataggcctgagcctg 9627536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 11845469 - 11845429
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  11845469 aataggccaggccaggccaggctttgataggcctgagcctg 11845429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 14599240 - 14599276
Alignment:
Q  300 cttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  14599240 cttaaaagcctatttcactataaagctttaaagccta 14599276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 17981413 - 17981373
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  17981413 aataggccaggccagaccagactttgataggcctgagcctg 17981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 20393044 - 20393000
Alignment:
Q  54 tggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||||  || ||||||||||| |||||||||    
T  20393044 tggaaataggccaggccaggtcaggctttgataggcctgagcctg 20393000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 29590585 - 29590545
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  29590585 aataggccaggccaggccaggctttgataggcctgagcctg 29590545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 38308187 - 38308147
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  38308187 aataggccaggccaggccaggctttgataggcctgagcctg 38308147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 40730552 - 40730512
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  40730552 aataggccaggccaggccaggctttgataggcctgagcctg 40730512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 48826010 - 48826050
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  48826010 aataggccaggccaggccaggctttgataggcctgagcctg 48826050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 19421195 - 19421249
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  19421195 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 19421249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 34705170 - 34705116
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  34705170 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 34705116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 39391305 - 39391359
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  39391305 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 39391359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 40000404 - 40000350
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  40000404 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 40000350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 40000650 - 40000596
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  40000650 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 40000596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 24540897 - 24540820
Alignment:
Q  259 aaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||| | || | | ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  24540897 aaagcctatttcagtgtaagacttgtctatcactataaggccttaaaagcctatttcactataaagctttaaatccta 24540820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 29077097 - 29077151
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  29077097 tgtctatcactataaggccttaaaaacatatttcattataaagctttaaagccta 29077151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 34636542 - 34636624
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||||||||||||||| | ||||||||||||| | |||||||||||    
T  34636542 gcctcaaagcctatttcagtgtaagacttgtctatcactataaggccttaaaaacttatttcactataaagttttaaagccta 34636624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 33069333 - 33069248
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  33069333 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcttatttcactataaagctttaaagccta 33069248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 47596983 - 47596898
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  47596983 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaagccta 47596898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 1782544 - 1782498
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1782544 actataaggccttaaaagcctatttcactataaagctttaaagccta 1782498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 25537192 - 25537242
Alignment:
Q  286 tatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  25537192 tatcactataaggtcttaaaagcgtatttcactataaagctttaaagccta 25537242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 33249678 - 33249724
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33249678 actataaggccttaaaagcctatttcactataaagctttaaagccta 33249724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 40488905 - 40488859
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  40488905 actataaggccttaaaagcctatttcactataaagctttaaagccta 40488859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 52174665 - 52174619
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  52174665 actataaggccttaaaagcctatttcactataaagctttaaagccta 52174619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 54650707 - 54650753
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  54650707 actataaggccttaaaagcctatttcactataaagctttaaagccta 54650753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 36672802 - 36672652
Alignment:
Q  184 ttacatgtctacttcaaattaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatg 283  Q
    ||||||| |||||| ||||||| || |||| ||| |||||||| |||||||| |||  ||   |||||| |||| |||||||||||||    | ||  |     
T  36672802 ttacatgcctactttaaattaacgtaattaaatattcaattttgtctacttctaaa--taggtcaaattggccttaaagcctatttcatctcaaggtcta 36672705  T
Q  284 tctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||  |||||||||||||||||| |||||||||||||||| | ||||||||    
T  36672704 tctattgctataaggccttaaaagcctatttcactataaggcatcaaagccta 36672652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 35639408 - 35639352
Alignment:
Q  280 catgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||| ||||||||||| |||||||| ||||||||| ||||| |||||||||||||    
T  35639408 catgtccatcactataagaccttaaaaacatatttcattataatgctttaaagccta 35639352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 46116683 - 46116727
Alignment:
Q  292 tataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  46116683 tataaggccttaaaagccgatttcactataaggctttaaagccta 46116727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 47597200 - 47597116
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||||||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  47597200 aataggccaggccagaccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 47597116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 34422565 - 34422480
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| | |||||||||||    
T  34422565 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagttttaaagccta 34422480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 39171339 - 39171258
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaag 332  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||    
T  39171339 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaag 39171258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 47844727 - 47844812
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||| ||||| |||||||||||||    
T  47844727 gccttaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcattataaagctttaaagccta 47844812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 13596400 - 13596446
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  13596400 actataaggccttaaaagtctatttcactataaagctttaaagccta 13596446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 28793914 - 28793960
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  28793914 actataaggccttaaaagtctatttcactataaagctttaaagccta 28793960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 46068252 - 46068294
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  46068252 actataaggccttaaaagcctatttcactataaagctttaaag 46068294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 53002407 - 53002453
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  53002407 actataaggcctttaaagcctatttcactataaagctttaaagccta 53002453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 34705425 - 34705341
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  34705425 aataggccaggccaggccaggctttgataggcctgagcctggcctacaaaattttttgcaggcctgagcctggcctatggccttt 34705341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 33370646 - 33370689
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  33370646 actataaggccttaaaagcctatttcactataaagctttcaagc 33370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 46181766 - 46181681
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||| ||||| | |||||||||||    
T  46181766 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcattataaagttttaaagccta 46181681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 55008318 - 55008403
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   |||||||||||||  |||||||||||||| |||||||| ||||    
T  55008318 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaaatatatttcactataaagctttaaaaccta 55008403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 18984150 - 18984108
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    |||||||| |||||||||| ||||||||||||| |||||||||    
T  18984150 actataagaccttaaaagcctatttcactataaagctttaaag 18984108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 20647655 - 20647613
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||||||||||||| |||||||||||||  ||||||||    
T  20647655 actataaggccttaaaagcctatttcactataaaactttaaag 20647613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 41873648 - 41873690
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||    
T  41873648 actataaggtcttaaaagcctatttcactataaagctttaaag 41873690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 1782800 - 1782760
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  1782800 aataggccaggccaggccaggctttgataggcctgagcctg 1782760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 4357138 - 4357098
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  4357138 aataggccaggccaggccaggctttgataggcctgagcctg 4357098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 9338376 - 9338336
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  9338376 aataggccaggccaggccaggctttgataggcctgagcctg 9338336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 13596171 - 13596211
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  13596171 aataggccaggccaggccaggctttgataggcctgagcctg 13596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 19420972 - 19421012
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  19420972 aataggccaggccaggccaggctttgataggcctgagcctg 19421012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 20647915 - 20647871
Alignment:
Q  54 tggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||| |||||||| ||| ||||||||||| |||||||||    
T  20647915 tggaaataggtcaggccaggccaggctttgataggcctgagcctg 20647871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 28793654 - 28793698
Alignment:
Q  54 tggaaataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||| |||||||| ||| ||||||||||| |||||||||    
T  28793654 tggaaataggtcaggccaggccaggctttgataggcctgagcctg 28793698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 29076874 - 29076914
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  29076874 aataggccaggccaggccaggctttgataggcctgagcctg 29076914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 30825128 - 30825092
Alignment:
Q  300 cttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  30825128 cttaaaagcatatttcgctataaggccttaaagccta 30825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 39391060 - 39391100
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  39391060 aataggccaggccaggccaggctttgataggcctgagcctg 39391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 39889331 - 39889371
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  39889331 aataggccagaccagaccaggctttgataggcctgagcctg 39889371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 40000895 - 40000855
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  40000895 aataggccaggccaggccaggctttgataggcctgagcctg 40000855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 336
Target Start/End: Original strand, 40459119 - 40459252
Alignment:
Q  201 attaaagtgattacatagtcaattttatctacttccaaaaatacaccaaatttgcctaaaagcctatttcaatatatggcatgtctatcactataaggcc 300  Q
    |||||||| |||| ||| |||||||| | |||||| |||  ||  ||||||| |||  ||||||||||||  | || |||||||||||  ||||||||||    
T  40459119 attaaagtaattaaatattcaattttgtgtacttctaaa--taggccaaattggccataaagcctatttctttgtaaggcatgtctattgctataaggcc 40459216  T
Q  301 ttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||| | ||||| || ||||| | | ||||||||    
T  40459217 ttaaaaacctattttaccataagacctcaaagccta 40459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 40489161 - 40489121
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||| ||||||||||| ||||||||||| |||||||||    
T  40489161 aataggctaggccagaccaggctttgataggcctgagcctg 40489121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 13028997 - 13028943
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13028997 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 13028943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 34726203 - 34726149
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  34726203 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 34726149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 40738065 - 40738119
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  40738065 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 40738119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 36983154 - 36983100
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  36983154 tgtctatcactataaggccttaaaaacatatttcactataaagcattaaagccta 36983100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 5936650 - 5936604
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  5936650 actataaggccttaaaagcctatttcactataaagctttaaagccta 5936604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 12033683 - 12033637
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12033683 actataaggccttaaaagcctatttcactataaagctttaaagccta 12033637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 39133499 - 39133545
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  39133499 actataaggccttaaaagcctatttcactataaagctttaaagccta 39133545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 21198033 - 21197948
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||| ||||    
T  21198033 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaaaccta 21197948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 27670654 - 27670569
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| |||| |||||||| | |||| | ||||||||||||   ||||||||||||||  ||||||||||||| |||||||||||||    
T  27670654 gcctcaaagtctatttcagtgtatgacttgtctatcactactataaggccttaaaagtctatttcactataacgctttaaagccta 27670569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 17852626 - 17852580
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17852626 actataagaccttaaaagcctatttcactataaagctttaaagccta 17852580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 18075640 - 18075594
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||    
T  18075640 actataaggccttaaaaacctatttcactataaagctttaaagccta 18075594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 32083999 - 32083953
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  32083999 actataagaccttaaaagcctatttcactataaagctttaaagccta 32083953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 43616548 - 43616594
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||    
T  43616548 actacaaggccttaaaagcctatttcactataaagctttaaagccta 43616594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 45261356 - 45261310
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  45261356 actataaggccttaaaagtctatttcactataaagctttaaagccta 45261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 36985494 - 36985454
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  36985494 aataggccaggccagaccaggctttgataggcctgagcctg 36985454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 40737810 - 40737894
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  40737810 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 40737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 43999513 - 43999470
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagc 333  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||    
T  43999513 actataaggccttaaaaacctatttcactataaagctttaaagc 43999470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 2995157 - 2995117
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  2995157 aataggccaggccagaccagactttgataggcctgagcctg 2995117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13029220 - 13029180
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  13029220 aataggccaggccaggccaggctttgataggcctgagcctg 13029180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 21198250 - 21198210
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  21198250 aataggccaggccaggccaggctttgataggcctgagcctg 21198210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 29044115 - 29044155
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  29044115 aataggccaggccaggccaggctttgataggcctgagcctg 29044155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 29557425 - 29557465
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  29557425 aataggccaggccagatcaggctttgataggcctgagcctg 29557465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 29768300 - 29768340
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  29768300 aataggccaggccaggccaggctttgataggcctgagcctg 29768340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 34726439 - 34726399
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  34726439 aataggccaggccaggccaggctttgataggcctgagcctg 34726399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 35959339 - 35959379
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  35959339 aataggccaggccaggccaagctttgataggcctgagcctg 35959379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 38448146 - 38448106
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  38448146 aataggccaggccaggccaggctttgataggcctgagcctg 38448106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 44092922 - 44092882
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| | |||||||||||||||||||    
T  44092922 aataggccaggccaggccaggttttgataggtctgagcctg 44092882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 18353325 - 18353379
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  18353325 tgtctatcactataaggccttaaaaacatatttcactataaagctttaaagccta 18353379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 19708832 - 19708778
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  19708832 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 19708778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 33785459 - 33785513
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33785459 tgtctatcactataaggccttaaaagcctatttcactataatgctttaaagccta 33785513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 34084202 - 34084256
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  34084202 tgtctatcactataaggccttaaaagcctatttcactataaagctttaaagccta 34084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 39860331 - 39860277
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  39860331 tgtctatcactataaggccttaaaaatatatttcactataaagctttaaagccta 39860277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 8417460 - 8417539
Alignment:
Q  260 aagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||||||||| || | | ||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||    
T  8417460 aagcctatttcaatgtaggacttgtctatcactactataaggccttaaaagcctatttcactataaagctttaaagccta 8417539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 2988917 - 2988963
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  2988917 actataaggccttaaaagcctatttcactataaagctttaaagccta 2988963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 13253509 - 13253555
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13253509 actataaggccttaaaagcctatttcactataaagctttaaagccta 13253555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 13884464 - 13884418
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13884464 actataaggccttaaaagcctatttcactataaagctttaaagccta 13884418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 17806074 - 17806120
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  17806074 actataaggccttaaaagcctatttcactataaagctttaaagccta 17806120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 52222991 - 52223037
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  52222991 actataaggccttaaaagcctatttcactataaagctttaaagccta 52223037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 24038451 - 24038536
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   |||||||||||||||  |||||||||||| |||||||||||||    
T  24038451 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagccgatttcactataaagctttaaagccta 24038536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 45372681 - 45372596
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   |||||| |||||||| ||||||||||||| |||||||||||||    
T  45372681 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggcattaaaagcctatttcactataaagctttaaagccta 45372596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 3831736 - 3831782
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  3831736 actataaggtcttaaaagcctatttcactataaagctttaaagccta 3831782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 12029210 - 12029160
Alignment:
Q  282 tgtctatcactataaggccttaaaagcatatttcactataaggctttaaag 332  Q
    |||||||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  12029210 tgtctatcactacaagaccttaaaagcctatttcactataaggccttaaag 12029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 31493300 - 31493254
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  31493300 actataaggccttaaaagtctatttcactataaagctttaaagccta 31493254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 46847024 - 46847070
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  46847024 actataaggccttaaaagcctatttcactataaagctttaaaaccta 46847070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 6305034 - 6305074
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  6305034 aataggccaggccaggccaggctttgataggtctgagcctg 6305074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 19709087 - 19709003
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgaccaactggatttttagcaaacctgagtctgacctatggccttt 142  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| || ||   |||||| |||  |||||| ||| ||||||||||||    
T  19709087 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggccttt 19709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 6891252 - 6891167
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | | ||||||||||   ||||||||||||| | ||||||||||||| |||||||||||||    
T  6891252 gcctcaaagcctatttcagtgtaagacttctctatcactactttaaggccttaaaaacttatttcactataaagctttaaagccta 6891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 31225481 - 31225396
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||| |||| | || | | ||||||||||||   ||||| ||||||||| |||||||||||||  ||||||||||||    
T  31225481 gcctaaaagcctagttcagtgtaagacttgtctatcactactataaggtcttaaaagcctatttcactataaaactttaaagccta 31225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 32239208 - 32239123
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||||| |||||||||||||   |||||||||||    
T  32239208 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaagcctatttcactataaacttttaaagccta 32239123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 44779591 - 44779548
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctgacc 101  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||    
T  44779591 aataggccaggccaggccaggctttgataggcctgagcctgacc 44779548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 44969256 - 44969337
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcactat---aaggccttaaaagcatatttcactataaggctttaaag 332  Q
    |||| ||||||||||||| | || | | |||||||||||||   |||||||| ||||| ||||||||||||| |||||||||    
T  44969256 gcctcaaagcctatttcagtgtaagacttgtctatcactattataaggcctttaaagcctatttcactataaagctttaaag 44969337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 50096939 - 50096854
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||| ||||||||| ||||||||||||| | |||||||||||    
T  50096939 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggtcttaaaagcctatttcactataaagttttaaagccta 50096854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 14270086 - 14270041
Alignment:
Q  291 ctataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||| |||||||||| |||||||||||||||| | ||||||||    
T  14270086 ctataagaccttaaaagcctatttcactataaggcctcaaagccta 14270041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 18437365 - 18437406
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaa 331  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  18437365 actataaggccttaaaagcctatttcagtataaagctttaaa 18437406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 18448223 - 18448264
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaa 331  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  18448223 actataaggccttaaaagcctatttcagtataaagctttaaa 18448264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 18453316 - 18453357
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaa 331  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  18453316 actataaggccttaaaagcctatttcagtataaagctttaaa 18453357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 5500074 - 5500034
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  5500074 aataggccaggccaggccaggctttgataggcctgagcctg 5500034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8417237 - 8417277
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  8417237 aataggccaggccaggccaggctttgataggcctgagcctg 8417277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 17805823 - 17805863
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  17805823 aataggccaggccaggccaggctttgataggcctgagcctg 17805863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 19507067 - 19507107
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    |||||| |||||||||||| ||||||||||| |||||||||    
T  19507067 aataggtcaggccagaccaggctttgataggcctgagcctg 19507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 33785204 - 33785244
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  33785204 aataggccaggccaggccaggctttgataggcctgagcctg 33785244  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 39860576 - 39860536
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  39860576 aataggccaggccaggccaggctttgataggcctgagcctg 39860536  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 39919614 - 39919654
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  39919614 aataggccaggccaggccaggctttgataggcctgagcctg 39919654  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 52222735 - 52222775
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  52222735 aataggccaggccaggccaggctttgataggcctgagcctg 52222775  T

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Target: scaffold0067 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 14198 - 14152
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14198 actataaggccttaaaagcctatttcactataaagctttaaagccta 14152  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 9161 - 9201
Alignment:
Q  58 aataggccaggccagaccatgctttgataggtctgagcctg 98  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  9161 aataggccaggccagaccaggctttgataggcctgagcctg 9201  T

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Target: scaffold0217 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 15794 - 15879
Alignment:
Q  254 gcctaaaagcctatttcaatatatggcatgtctatcacta---taaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||| ||||||||||||| | || | | ||||||||||||   ||||||||||||| | |||||||||||||  ||||||||||||    
T  15794 gcctcaaagcctatttcagtgtaagacttgtctatcactactataaggccttaaaaacctatttcactataaaactttaaagccta 15879  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 40240 - 40286
Alignment:
Q  290 actataaggccttaaaagcatatttcactataaggctttaaagccta 336  Q
    |||||||| |||||||||| ||||||||||||| | |||||||||||    
T  40240 actataagaccttaaaagcctatttcactataaagatttaaagccta 40286  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 218138 - 218102
Alignment:
Q  300 cttaaaagcatatttcactataaggctttaaagccta 336  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  218138 cttaaaagcctatttcactataaagctttaaagccta 218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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