View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5770-Insertion-3 (Length: 398)

Name: NF5770-Insertion-3
Description: NF5770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5770-Insertion-3
NF5770-Insertion-3
[»] chr3 (54 HSPs)
chr3 (13-398)||(19868951-19869336)
chr3 (178-391)||(25492036-25492249)
chr3 (24-398)||(27054850-27055229)
chr3 (13-118)||(30158072-30158177)
chr3 (19-118)||(25888513-25888612)
chr3 (13-118)||(2784090-2784195)
chr3 (21-118)||(42354456-42354553)
chr3 (19-118)||(10963382-10963481)
chr3 (19-118)||(10966891-10966990)
chr3 (24-118)||(20536628-20536722)
chr3 (21-118)||(6173396-6173493)
chr3 (25-118)||(9157969-9158062)
chr3 (30-118)||(4225896-4225984)
chr3 (19-118)||(10959875-10959974)
chr3 (21-118)||(2279663-2279760)
chr3 (13-106)||(16314645-16314738)
chr3 (13-106)||(16414811-16414904)
chr3 (13-106)||(18495639-18495732)
chr3 (21-118)||(18883190-18883287)
chr3 (19-106)||(5887040-5887127)
chr3 (19-106)||(5897024-5897111)
chr3 (24-118)||(4250365-4250459)
chr3 (24-118)||(28327423-28327517)
chr3 (24-118)||(28330748-28330842)
chr3 (13-106)||(18515785-18515878)
chr3 (13-106)||(23374785-23374878)
chr3 (21-108)||(9154792-9154879)
chr3 (24-118)||(18551648-18551742)
chr3 (30-108)||(54736183-54736262)
chr3 (13-106)||(29233644-29233736)
chr3 (24-118)||(3305829-3305923)
chr3 (20-118)||(36037000-36037097)
chr3 (288-398)||(20536340-20536452)
chr3 (191-315)||(22032411-22032535)
chr3 (63-232)||(26822189-26822358)
chr3 (21-60)||(44508785-44508824)
chr3 (342-398)||(3306149-3306206)
chr3 (323-396)||(26822048-26822120)
chr3 (317-397)||(30157805-30157885)
chr3 (344-395)||(31549573-31549625)
chr3 (290-397)||(46731585-46731691)
chr3 (47-110)||(11271060-11271122)
chr3 (269-311)||(18551895-18551937)
chr3 (269-347)||(35366486-35366562)
chr3 (358-395)||(5886757-5886794)
chr3 (358-395)||(5896741-5896778)
chr3 (358-395)||(6173123-6173160)
chr3 (285-398)||(11138577-11138688)
chr3 (285-398)||(22626319-22626430)
chr3 (358-395)||(23374503-23374540)
chr3 (342-398)||(4225624-4225679)
chr3 (358-398)||(16314360-16314400)
chr3 (358-398)||(16414526-16414566)
chr3 (358-398)||(18495354-18495394)
[»] chr5 (32 HSPs)
chr5 (74-398)||(1810197-1810521)
chr5 (24-398)||(2499769-2500147)
chr5 (269-398)||(21680586-21680714)
chr5 (24-398)||(33320686-33321063)
chr5 (278-398)||(33921333-33921452)
chr5 (20-118)||(40799961-40800059)
chr5 (21-118)||(2453259-2453356)
chr5 (21-118)||(3195070-3195167)
chr5 (24-397)||(9690742-9691117)
chr5 (21-118)||(19686146-19686243)
chr5 (13-118)||(26548062-26548167)
chr5 (13-118)||(26551621-26551726)
chr5 (13-118)||(28562404-28562509)
chr5 (13-118)||(28565972-28566077)
chr5 (21-118)||(34652800-34652897)
chr5 (19-118)||(4731876-4731975)
chr5 (21-104)||(17944627-17944710)
chr5 (21-118)||(19689529-19689626)
chr5 (25-313)||(26337963-26338256)
chr5 (34-210)||(35432442-35432619)
chr5 (285-398)||(34405975-34406087)
chr5 (62-235)||(36330741-36330914)
chr5 (13-106)||(26726914-26727007)
chr5 (13-90)||(25185355-25185432)
chr5 (63-235)||(36335037-36335210)
chr5 (323-397)||(14616437-14616510)
chr5 (285-397)||(7649950-7650060)
chr5 (74-118)||(20077653-20077697)
chr5 (358-398)||(26727252-26727292)
chr5 (270-313)||(35432330-35432373)
chr5 (298-397)||(36330976-36331074)
chr5 (362-395)||(20056160-20056193)
[»] chr7 (48 HSPs)
chr7 (24-398)||(6964266-6964644)
chr7 (30-398)||(38431378-38431750)
chr7 (24-398)||(3540931-3541307)
chr7 (24-397)||(16546982-16547359)
chr7 (24-397)||(16618303-16618680)
chr7 (19-118)||(22232672-22232771)
chr7 (19-118)||(22253968-22254067)
chr7 (19-118)||(22257232-22257331)
chr7 (13-118)||(2349427-2349532)
chr7 (13-118)||(11825400-11825505)
chr7 (10-118)||(8257632-8257740)
chr7 (19-118)||(20100618-20100717)
chr7 (13-118)||(748086-748191)
chr7 (10-118)||(8257853-8257961)
chr7 (13-118)||(8397813-8397918)
chr7 (21-118)||(23467213-23467310)
chr7 (19-118)||(5826753-5826852)
chr7 (24-118)||(43549172-43549266)
chr7 (13-106)||(2251839-2251932)
chr7 (13-106)||(23598820-23598913)
chr7 (19-106)||(26460439-26460526)
chr7 (285-398)||(6967274-6967386)
chr7 (285-398)||(17866360-17866472)
chr7 (13-118)||(26182270-26182375)
chr7 (323-398)||(17857887-17857962)
chr7 (21-104)||(22083502-22083585)
chr7 (24-106)||(710074-710156)
chr7 (24-118)||(44017837-44017931)
chr7 (25-232)||(26153131-26153342)
chr7 (258-397)||(17152173-17152310)
chr7 (21-199)||(26808694-26808871)
chr7 (40-118)||(42606279-42606356)
chr7 (33-118)||(6214420-6214505)
chr7 (32-114)||(23775868-23775950)
chr7 (283-396)||(28577687-28577798)
chr7 (358-398)||(709790-709830)
chr7 (358-398)||(2252177-2252217)
chr7 (358-398)||(23598535-23598575)
chr7 (63-167)||(28577913-28578017)
chr7 (309-397)||(36842945-36843032)
chr7 (358-397)||(20100950-20100989)
chr7 (63-110)||(42859008-42859054)
chr7 (323-397)||(24783573-24783646)
chr7 (80-118)||(30058196-30058234)
chr7 (269-398)||(9765912-9766039)
chr7 (47-108)||(17601686-17601747)
chr7 (283-356)||(17601877-17601950)
chr7 (358-395)||(26460771-26460808)
[»] chr1 (30 HSPs)
chr1 (26-398)||(34552445-34552821)
chr1 (24-395)||(18392372-18392747)
chr1 (24-398)||(6205859-6206238)
chr1 (260-391)||(49716589-49716721)
chr1 (272-391)||(49720083-49720203)
chr1 (22-118)||(17902833-17902929)
chr1 (21-118)||(49716349-49716446)
chr1 (21-118)||(49719831-49719928)
chr1 (20-118)||(28918350-28918448)
chr1 (24-118)||(50197004-50197098)
chr1 (13-118)||(20981328-20981433)
chr1 (13-118)||(37641836-37641941)
chr1 (24-118)||(33898305-33898399)
chr1 (285-398)||(10765046-10765158)
chr1 (285-398)||(13493389-13493501)
chr1 (13-129)||(20964425-20964540)
chr1 (19-106)||(16838991-16839078)
chr1 (19-106)||(16848921-16849008)
chr1 (24-118)||(23441329-23441423)
chr1 (13-106)||(24200301-24200394)
chr1 (26-118)||(3087770-3087862)
chr1 (317-398)||(50196722-50196803)
chr1 (285-397)||(13496114-13496224)
chr1 (358-398)||(17902560-17902600)
chr1 (358-398)||(20981665-20981705)
chr1 (358-397)||(24200017-24200056)
chr1 (80-118)||(5317893-5317931)
chr1 (358-395)||(16838709-16838746)
chr1 (358-395)||(16848639-16848676)
chr1 (358-398)||(37642167-37642207)
[»] chr8 (30 HSPs)
chr8 (24-398)||(39659719-39660096)
chr8 (24-380)||(13332068-13332428)
chr8 (259-398)||(9467283-9467422)
chr8 (258-398)||(453803-453944)
chr8 (31-398)||(5828013-5828384)
chr8 (21-118)||(20262532-20262629)
chr8 (21-118)||(21049162-21049259)
chr8 (19-118)||(14187976-14188075)
chr8 (19-118)||(22654237-22654336)
chr8 (13-118)||(5964225-5964330)
chr8 (13-118)||(27863599-27863704)
chr8 (21-118)||(30645450-30645547)
chr8 (10-106)||(17013089-17013185)
chr8 (10-118)||(18696020-18696128)
chr8 (10-106)||(17544016-17544112)
chr8 (21-106)||(24903541-24903626)
chr8 (21-118)||(31981325-31981422)
chr8 (13-104)||(24435000-24435091)
chr8 (13-104)||(24445046-24445137)
chr8 (33-118)||(587302-587387)
chr8 (33-118)||(626535-626620)
chr8 (63-118)||(31986294-31986349)
chr8 (80-118)||(453624-453662)
chr8 (288-398)||(12575307-12575416)
chr8 (358-398)||(24903257-24903297)
chr8 (342-396)||(5980067-5980122)
chr8 (362-395)||(17931296-17931329)
chr8 (362-398)||(17012804-17012840)
chr8 (362-398)||(17544361-17544397)
chr8 (74-118)||(31468169-31468213)
[»] chr4 (33 HSPs)
chr4 (24-398)||(13979113-13979490)
chr4 (24-397)||(15851152-15851529)
chr4 (273-398)||(33400082-33400207)
chr4 (24-398)||(19928859-19929235)
chr4 (19-118)||(18859753-18859852)
chr4 (21-118)||(10247792-10247889)
chr4 (21-118)||(11702632-11702729)
chr4 (21-106)||(14701882-14701967)
chr4 (19-106)||(49636581-49636668)
chr4 (24-118)||(23653254-23653348)
chr4 (24-118)||(26703536-26703630)
chr4 (13-106)||(3719553-3719646)
chr4 (285-398)||(647210-647322)
chr4 (323-398)||(650482-650557)
chr4 (19-106)||(3734287-3734374)
chr4 (19-106)||(49639874-49639961)
chr4 (21-129)||(10385917-10386018)
chr4 (258-398)||(37176855-37176992)
chr4 (21-99)||(33400392-33400470)
chr4 (41-118)||(17670309-17670386)
chr4 (30-118)||(11560799-11560886)
chr4 (33-103)||(24605307-24605377)
chr4 (33-118)||(7394916-7395000)
chr4 (63-110)||(39050602-39050649)
chr4 (131-232)||(21217499-21217600)
chr4 (358-398)||(3719268-3719308)
chr4 (358-395)||(3734619-3734656)
chr4 (285-398)||(12172099-12172211)
chr4 (323-380)||(21217359-21217416)
chr4 (358-395)||(49639592-49639629)
chr4 (362-394)||(8871481-8871513)
chr4 (358-394)||(11561123-11561159)
chr4 (288-397)||(26062698-26062808)
[»] scaffold0273 (1 HSPs)
scaffold0273 (25-398)||(19516-19894)
[»] chr6 (46 HSPs)
chr6 (26-360)||(35026932-35027270)
chr6 (24-398)||(12746785-12747166)
chr6 (269-391)||(11410990-11411113)
chr6 (24-398)||(28894242-28894620)
chr6 (272-398)||(33678948-33679076)
chr6 (21-118)||(34502319-34502416)
chr6 (21-118)||(11410741-11410838)
chr6 (21-118)||(5618262-5618359)
chr6 (13-118)||(14966199-14966304)
chr6 (13-118)||(14969679-14969784)
chr6 (21-118)||(17231832-17231929)
chr6 (21-118)||(28117816-28117913)
chr6 (30-118)||(3826863-3826951)
chr6 (30-118)||(31123418-31123506)
chr6 (24-118)||(15578960-15579054)
chr6 (24-118)||(33679234-33679328)
chr6 (21-118)||(9313830-9313927)
chr6 (285-398)||(14790745-14790857)
chr6 (24-118)||(2331261-2331355)
chr6 (13-103)||(22920497-22920587)
chr6 (24-106)||(7560232-7560314)
chr6 (24-106)||(11296195-11296277)
chr6 (285-398)||(14795773-14795885)
chr6 (24-118)||(2330609-2330703)
chr6 (46-118)||(7560144-7560216)
chr6 (24-118)||(17696569-17696664)
chr6 (33-110)||(20189483-20189560)
chr6 (33-110)||(22146431-22146508)
chr6 (66-118)||(13095764-13095816)
chr6 (33-104)||(16731362-16731433)
chr6 (358-398)||(2331588-2331628)
chr6 (269-313)||(15578763-15578807)
chr6 (342-397)||(22221905-22221959)
chr6 (342-397)||(22247740-22247794)
chr6 (342-395)||(23842565-23842619)
chr6 (13-50)||(14969636-14969673)
chr6 (288-397)||(19664674-19664782)
chr6 (77-118)||(26390970-26391011)
chr6 (285-397)||(1838602-1838712)
chr6 (74-118)||(6856612-6856656)
chr6 (288-356)||(15535184-15535252)
chr6 (358-398)||(22920835-22920875)
chr6 (342-395)||(23848075-23848129)
chr6 (358-398)||(17232161-17232201)
chr6 (317-397)||(27649259-27649338)
chr6 (74-110)||(28974433-28974469)
[»] chr2 (29 HSPs)
chr2 (24-398)||(38315808-38316186)
chr2 (258-391)||(29435965-29436099)
chr2 (256-387)||(13572059-13572192)
chr2 (13-118)||(11056310-11056415)
chr2 (21-118)||(29435727-29435824)
chr2 (21-118)||(1503478-1503575)
chr2 (21-118)||(1506682-1506779)
chr2 (21-118)||(4577801-4577898)
chr2 (13-118)||(11059768-11059873)
chr2 (21-119)||(30719751-30719849)
chr2 (10-118)||(15704015-15704123)
chr2 (21-118)||(15719319-15719416)
chr2 (19-106)||(18938868-18938955)
chr2 (24-118)||(40677817-40677911)
chr2 (13-118)||(13518273-13518377)
chr2 (13-106)||(22592482-22592575)
chr2 (63-237)||(40139140-40139314)
chr2 (21-109)||(38326319-38326413)
chr2 (41-118)||(18011940-18012016)
chr2 (288-397)||(23673353-23673461)
chr2 (309-397)||(16295048-16295135)
chr2 (269-353)||(32074209-32074293)
chr2 (323-398)||(36327090-36327164)
chr2 (288-398)||(32575692-32575801)
chr2 (84-118)||(25925175-25925209)
chr2 (358-395)||(18939200-18939237)
chr2 (308-398)||(24384932-24385023)
chr2 (77-118)||(40778988-40779029)
chr2 (358-398)||(22592819-22592859)
[»] scaffold0401 (1 HSPs)
scaffold0401 (24-398)||(4238-4616)
[»] scaffold0068 (1 HSPs)
scaffold0068 (269-398)||(33737-33865)
[»] scaffold0043 (3 HSPs)
scaffold0043 (24-398)||(13571-13949)
scaffold0043 (258-398)||(11467-11606)
scaffold0043 (79-118)||(5631-5670)
[»] scaffold0360 (2 HSPs)
scaffold0360 (21-118)||(2430-2527)
scaffold0360 (21-118)||(6262-6359)
[»] scaffold0062 (2 HSPs)
scaffold0062 (10-118)||(52927-53035)
scaffold0062 (21-118)||(67876-67973)
[»] scaffold0007 (1 HSPs)
scaffold0007 (35-210)||(92423-92601)
[»] scaffold0134 (1 HSPs)
scaffold0134 (21-103)||(7214-7296)
[»] scaffold0214 (3 HSPs)
scaffold0214 (21-118)||(13583-13679)
scaffold0214 (21-118)||(27599-27695)
scaffold0214 (24-118)||(20035-20129)
[»] scaffold0083 (3 HSPs)
scaffold0083 (24-118)||(29301-29395)
scaffold0083 (24-118)||(53098-53192)
scaffold0083 (157-398)||(42716-42958)
[»] scaffold0012 (2 HSPs)
scaffold0012 (13-106)||(26935-27029)
scaffold0012 (358-398)||(26650-26690)
[»] scaffold1048 (1 HSPs)
scaffold1048 (21-106)||(1378-1463)
[»] scaffold0045 (1 HSPs)
scaffold0045 (270-397)||(90306-90432)
[»] scaffold0175 (2 HSPs)
scaffold0175 (21-118)||(28704-28801)
scaffold0175 (358-398)||(28431-28471)
[»] scaffold0067 (2 HSPs)
scaffold0067 (13-106)||(27330-27423)
scaffold0067 (358-395)||(27668-27705)
[»] scaffold0014 (1 HSPs)
scaffold0014 (63-118)||(228652-228707)
[»] scaffold0352 (1 HSPs)
scaffold0352 (288-397)||(2627-2734)
[»] scaffold0002 (1 HSPs)
scaffold0002 (82-210)||(468418-468544)
[»] scaffold0766 (1 HSPs)
scaffold0766 (288-366)||(3635-3713)
[»] scaffold1431 (1 HSPs)
scaffold1431 (75-118)||(475-518)
[»] scaffold0264 (1 HSPs)
scaffold0264 (358-397)||(24193-24232)


Alignment Details
Target: chr3 (Bit Score: 294; Significance: 1e-165; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 13 - 398
Target Start/End: Original strand, 19868951 - 19869336
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  19868951 gttctgttattgcttccgcggttattcaattggtttaagagattaaaaagttataacttaggaaagagttttgagtcaagagattgatcaaaactattta 19869050  T
Q  113 gttaatatgccatagagttaggtgaacattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaaggcttgattatctgttttatt 212  Q
    ||||||  | |||||||||||||||||||| ||| ||||||  || ||||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  19869051 gttaatccgtcatagagttaggtgaacattgagagagaagatgagaaaattattcaccgtgaacaatagaggattcaaaggcttgattatatgttttatt 19869150  T
Q  213 ataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcctagagcaacccataaatttactacatcctttattttaac 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  19869151 ataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcctaaggcaacccataaatttactacatcctttattttaac 19869250  T
Q  313 gaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||    
T  19869251 gaacttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactactttgatagattttagtacacttgccaaata 19869336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 178 - 391
Target Start/End: Original strand, 25492036 - 25492249
Alignment:
Q  178 atagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcctaga 277  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  25492036 atagaggattcaaagacttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcaggtgcctagg 25492135  T
Q  278 gcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagt 377  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||     
T  25492136 gcaacccataaatttactacatcttttattttaatgaacttgctaagtagaaattaacaacgatcctcgtggatacgaactttattactattttgatagc 25492235  T
Q  378 ttttggtacacttg 391  Q
    ||||||||||||||    
T  25492236 ttttggtacacttg 25492249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 27054850 - 27055229
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggtttt-gagtcaagagattgatcaaaactatttagttaatatgc 122  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| | ||||||||| ||     
T  27054850 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaaccacttagttaatttgt 27054949  T
Q  123 catagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaat 218  Q
    | || || ||||| ||   | || ||| ||||||    ||||||| |||||| || ||||||||||||| ||||||||||| |||||||||| |  || |    
T  27054950 cgtaaagctaggttaatttctttgagagagaagagagccaaattactcacggtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatt 27055049  T
Q  219 tccaaaccaatttaattgcatctcatttacattttatgcac-caaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaa 315  Q
      ||||| | |||| |||  | |  ||||| ||||||  |  ||||| || |||||||| ||||||| ||||| ||||||||||| ||||||||||||||    
T  27055050 atcaaactatttta-ttgactttg-tttacgttttataaaatcaaatccaactgcctagggcaaccccataaaatttactacatcttttattttaacgaa 27055147  T
Q  316 cttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||  |||||||||||    
T  27055148 cttgctaagtagaaattaacaacggtcctcgtggatacgaaatttattactacttcgatag-ttttggtatgcttgccaaata 27055229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 30158177 - 30158072
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  30158177 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaatctactta 30158078  T
Q  113 gttaat 118  Q
    ||||||    
T  30158077 gttaat 30158072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 25888612 - 25888513
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  25888612 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaactacttagttaat 25888513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 2784090 - 2784195
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||| | ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  2784090 gttcttttatcgcttctgtggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 2784189  T
Q  113 gttaat 118  Q
    ||||||    
T  2784190 gttaat 2784195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 42354553 - 42354456
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42354553 atcgcttctgcggttattcaatcggtttaagagattaaaaggttttaacttaagaaagggttttgagtcaagagattgatcaaaactaattagttaat 42354456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10963382 - 10963481
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||| |||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  10963382 ttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 10963481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10966891 - 10966990
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||| |||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  10966891 ttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 10966990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 20536722 - 20536628
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20536722 gctttcgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactatttagttaat 20536628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 6173493 - 6173396
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||    
T  6173493 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaactacttagataat 6173396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 9157969 - 9158062
Alignment:
Q  25 cttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9157969 cttccgcggttattcaatcagtttaagagattaaaaggttataaattaagaaagggttttgagtcaagagattgatcaaaactaattagttaat 9158062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 4225984 - 4225896
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  4225984 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 4225896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10959875 - 10959974
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||| |||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  10959875 ttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttaattaat 10959974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 2279760 - 2279663
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||| |||||||||||||||||| ||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  2279760 atcgcttccgcagttattcaatcggtttaagagattaaagggttataacttaggaaagggttttgattcaagagattgatcaaaactacttagttaat 2279663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 16314738 - 16314645
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||| |||||||||||||||||||    
T  16314738 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggatagggttttgattcaagagattgatcaaaac 16314645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 16414904 - 16414811
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  16414904 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgataaaaac 16414811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 18495732 - 18495639
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||| |||||||||||||||||||    
T  18495732 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggatagggttttgattcaagagattgatcaaaac 18495639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 18883190 - 18883287
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||    
T  18883190 atcgcttccacggttattcaattggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaattaattagttaat 18883287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 5887127 - 5887040
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  5887127 ttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 5887040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 5897111 - 5897024
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  5897111 ttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 5897024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 4250365 - 4250459
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| | |||||||||    
T  4250365 gcttccacggttattcaatcggtttaagagattaaaaggttataacttcggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 4250459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 28327423 - 28327517
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  28327423 gcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 28327517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 28330748 - 28330842
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  28330748 gcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 28330842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 18515878 - 18515785
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  18515878 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgataaaaac 18515785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 23374878 - 23374785
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  23374878 gttcttttatagcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 23374785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 9154792 - 9154879
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaacta 108  Q
    ||||||||  |||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  9154792 atcgcttcaacggttattcaatcggtttaagagattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaacta 9154879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 18551648 - 18551742
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| | |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||    
T  18551648 gcttccactgttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagacaagagattgatcaaaaccacttagttaat 18551742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 54736262 - 54736183
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaaggg-ttttgagtcaagagattgatcaaaacta 108  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  54736262 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaacta 54736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 29233736 - 29233644
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||||||||| || ||||||||||| |||||| ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  29233736 gttcttttatcgcttctgcagttattcaatcagtttaagagattaaaaggttataactt-agaaagggttttgactcaagagattgatcaaaac 29233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 3305829 - 3305923
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||||||| ||||| ||||||||| |||||||||   |||||||||||| |||||||||||||||||||| | |||||||||    
T  3305829 gcttccgcgattattcaatcgatttaagagattaaaaggttataactccggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 3305923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 36037097 - 36037000
Alignment:
Q  20 tatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||   |||||||| ||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| | |||||||    
T  36037097 tatcgcttccaaagttattca-tcggtttaagagattaaaaggttataacctaggaaagggttttgagtcaagagattgatcaaagctaataagttaat 36037000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 398
Target Start/End: Complemental strand, 20536452 - 20536340
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaacttta--ttactaattcgatagtttttggta 385  Q
    ||||||||||||||||| |  ||| ||| || |||||||||| ||||  || | |||||||||||||| ||||   |||||| ||| |||||||||||||    
T  20536452 aatttactacatcctttttaataatgaaatttctaagtagaagttaaatacagtcctcgtggatacgatcttttatttactacttcaatagtttttggta 20536353  T
Q  386 cacttgccaaata 398  Q
    ||||| |||||||    
T  20536352 cactttccaaata 20536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 315
Target Start/End: Complemental strand, 22032535 - 22032411
Alignment:
Q  191 aggcttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcctagagcaacccat-aaa 289  Q
    |||||| || || ||||||| |||||||| |||||||| |||||||| |   |||||||||||||||||||||||   |||||||| |||| | || |||    
T  22032535 aggcttaatcatatgttttagtataaatttcaaaccaagttaattgcgttctatttacattttatgcaccaaatttgactgcctagggcaaactataaaa 22032436  T
Q  290 tttactacatcctttattttaacgaa 315  Q
    |||| || |||| |||||||||||||    
T  22032435 tttattatatcc-ttattttaacgaa 22032411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 26822358 - 26822189
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaat 162  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||||||  ||||||  |   || |  |||||||||||| ||| ||||||  |||||||    
T  26822358 ttataacttaggaaagagttttgactcaagaaattgatcaaaactattaggttaatcagttgtaaaactaggtgaacattgagaaagaagaggagcaaat 26822259  T
Q  163 tattcacggcgaacaatagaggattcaaaggcttgattatctgttttattataaattccaaaccaattta 232  Q
    ||||||| | |  ||||||| ||||  |||||||||| || | ||||| | ||| |  ||||||||||||    
T  26822258 tattcacagtgtgcaatagatgatttgaaggcttgatcatttattttaatctaattctcaaaccaattta 26822189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 44508785 - 44508824
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaa 60  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  44508785 atcgcttccgcggttattcaatcggtttaagagattaaaa 44508824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 3306149 - 3306206
Alignment:
Q  342 cctcgtggatacgaactttatt-actaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||| ||| | || |||||||||| |||||||||||||||||||    
T  3306149 cctcgtggatacgaacttaatttattacttcgatagttattggtacacttgccaaata 3306206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 26822120 - 26822048
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaa 396  Q
    |||| ||||||||| ||| ||| ||||||||||| ||||||| || |||||||| ||||||||||||| |||||    
T  26822120 agtaaaaattaacagcggtccttgtggatacgaattttattattacttcgatag-ttttggtacactttccaaa 26822048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 30157885 - 30157805
Alignment:
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttatt-actaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||||| || ||||||| | | |||||||||||||||||| ||| | || |||||||||| ||||||||||||||||||    
T  30157885 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttaatttattacttcgatagttattggtacacttgccaaat 30157805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 31549573 - 31549625
Alignment:
Q  344 tcgtggatacgaactt-tattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||||||||| | ||| || |||||||||||||||||||||||||||    
T  31549573 tcgtggatacgaacttattttattacttcgatagtttttggtacacttgccaa 31549625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 46731585 - 46731691
Alignment:
Q  290 tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttatt-actaattcgatagtttttggtacac 388  Q
    |||| |||||||||| |  ||| ||| ||||| ||||||| |||||||||| |||||||||||| || |||||| | || ||||||||||||| || |||    
T  46731585 tttaatacatcctttttgataaagaaattgctgagtagaagttaacaacggtcctcgtggatac-aaatttattcattacttcgatagttttt-gttcac 46731682  T
Q  389 ttgccaaat 397  Q
    |||||||||    
T  46731683 ttgccaaat 46731691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 11271060 - 11271122
Alignment:
Q  47 ttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    |||| ||||||| | ||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  11271060 ttaagagattaagaggttataacttaggaaagggttttgacttaa-agattgatcaaaactatt 11271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 18551895 - 18551937
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaa 311  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  18551895 ctgcctagagcaacccataaatttaacacatccttaattttaa 18551937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 35366486 - 35366562
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgt 347  Q
    |||||||| |||||| | ||||||| |||||||||| || ||| ||| ||||||||||||| |||||||||| ||||||    
T  35366486 ctgcctagggcaaccta-aaatttaatacatccttt-ttataatgaaattgctaagtagaagttaacaacggtcctcgt 35366562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 5886794 - 5886757
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  5886794 tttattactacttcgatagttattggtacacttgccaa 5886757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 5896778 - 5896741
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  5896778 tttattactacttcgatagttattggtacacttgccaa 5896741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 6173160 - 6173123
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  6173160 tttattactacttcgatagttattggtacacttgccaa 6173123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 11138688 - 11138577
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||||||||||| ||||  || | ||||||||| ||||||||| ||| || |||||| |  ||||||    
T  11138688 ataaattta-tacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaacttt-ttattacttcgatcgaatttggt 11138591  T
Q  385 acacttgccaaata 398  Q
     |||||||||||||    
T  11138590 tcacttgccaaata 11138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 22626430 - 22626319
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||||||||||| ||||  || | ||||||||| ||||||||| ||| || |||||| |  ||||||    
T  22626430 ataaattta-tacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgaacttt-ttattacttcgatcgaatttggt 22626333  T
Q  385 acacttgccaaata 398  Q
     |||||||||||||    
T  22626332 tcacttgccaaata 22626319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 23374540 - 23374503
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  23374540 tttattactatttcgatagttattggtacacttgccaa 23374503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 4225679 - 4225624
Alignment:
Q  342 cctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||| ||||||| | ||||||||||| |||||||| | |||||||||||||||||||    
T  4225679 cctcatggatacaatctttattactacttcgatag-tattggtacacttgccaaata 4225624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 16314400 - 16314360
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  16314400 tttattactacttccatagttattggtacacttgccaaata 16314360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 16414566 - 16414526
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  16414566 tttattactacttccatagttattggtacacttgccaaata 16414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 18495394 - 18495354
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  18495394 tttattactacttccatagttattggtacacttgccaaata 18495354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 74 - 398
Target Start/End: Complemental strand, 1810521 - 1810197
Alignment:
Q  74 gaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaattattcacggcg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||| |||||||| |  |||||||||||||||| |    
T  1810521 gaaagggttttgagtcaagagattgatcaaaactatttagttaatccgtcgtagagttaggtgaacattgagatagaaaaggagcaaattattcacggtg 1810422  T
Q  174 aacaatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcc 273  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1810421 aacgatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcc 1810322  T
Q  274 tagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcga 373  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  1810321 tagggcaacccataaatttactacatcctttattttaacgaacttgttaagtagaaattaacaacggtcctcgtgaatacgaactttattactacttcga 1810222  T
Q  374 tagtttttggtacacttgccaaata 398  Q
    ||| |||||||||||||| ||||||    
T  1810221 tagcttttggtacacttgtcaaata 1810197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 2500147 - 2499769
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||||||||||||||||| |||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| || |    
T  2500147 gcttccgcggttattcaatcagtttaagaaattaaaaggttataacttatgaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtc 2500048  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     ||||  ||||| ||   | || ||| ||||||   |||||||| |||| | || ||||||||||||  ||||||||||| |||| ||||| |  || |     
T  2500047 gtagacctaggttaatttctttgagagagaagagaggcaaattactcactgtgagcaatagaggatttgaaaggcttgatcatctattttaatccaatta 2499948  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaactt 318  Q
     ||||||| |||| || | |   ||| |  ||||||||| |||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  2499947 tcaaaccattttatttactttgtattaag-ttttatgcaaccaaatccaactgcttagggcaacccataaatttactacatcctttattttaacgaactt 2499849  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  2499848 gctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatatcttttggtacacttgccaaata 2499769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 269 - 398
Target Start/End: Original strand, 21680586 - 21680714
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaa 368  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||     
T  21680586 ctgcctagggcaacccataaatttagtacatcctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacaaactttattactac 21680685  T
Q  369 ttcgatagtttttggtacacttgccaaata 398  Q
    |||||||| |||||||||||||||||||||    
T  21680686 ttcgatag-ttttggtacacttgccaaata 21680714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 33321063 - 33320686
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | |    
T  33321063 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtc 33320964  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||   |||||||| ||||   || ||||||||||||| ||||||||||| ||  |||||| |  || |     
T  33320963 gtaaagctaggttaatttctttgagagagaagagaggcaaattactcacaatgagcaatagaggattcgaaaggcttgataattagttttaatccaatta 33320864  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaactt 318  Q
     ||||||| |||| || | | | |||||| |||  ||| ||||||| ||| ||||||| |  ||||||||||||| |||||||||||||||||||   ||    
T  33320863 tcaaaccattttattttc-tgttatttacttttattgcaaccaaatccagttgcctagggtgacccataaatttaatacatcctttattttaacgctttt 33320765  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||  |||||||||| | | | | ||  ||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  33320764 gccgagtagaaattga-agcagtccctgtggatacgaactttattattacttcgatagcttttggtacacttgccaaata 33320686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 278 - 398
Target Start/End: Original strand, 33921333 - 33921452
Alignment:
Q  278 gcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagt 377  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||     
T  33921333 gcaacccataaatttaatacatccttaattttaacgaacttgctaagtagaaattcacaacggtcctcgtggatacgaactttattactacttcgatag- 33921431  T
Q  378 ttttggtacacttgccaaata 398  Q
    |||||||||||||||| ||||    
T  33921432 ttttggtacacttgccgaata 33921452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 40800059 - 40799961
Alignment:
Q  20 tatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  40800059 tatcgcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaagggttttgagttaagagattgatcaaaactacttagttaat 40799961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 2453259 - 2453356
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  2453259 atcgcttccacggttattcaatcggtttaagagattaaaaagttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 2453356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 3195070 - 3195167
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  3195070 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 3195167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 397
Target Start/End: Original strand, 9690742 - 9691117
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | |    
T  9690742 gcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtc 9690841  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||     || ||| ||||||   |||||||| |||| | || ||||||||||||| ||||||||||| |||||||||| |  || |     
T  9690842 gta-agctaggttaatttatttgagagagaagaaaggcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatta 9690940  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     ||||||| |||| || | | | |||||| ||||| ||| | || ||  | |||||||| |||||||||||||||| |||||||||||||||||||   |    
T  9690941 tcaaaccattttattttc-tgttatttactttttattgcaatcagatcaaactgcctagggcaacccataaatttaatacatcctttattttaacgcttt 9691039  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||  |||||||||| | |||   |   |||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  9691040 tgccgagtagaaattga-aacaatctctgtggatacgaactttattactacttcgat-ggttttggtacacttgccaaat 9691117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 19686146 - 19686243
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  19686146 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 19686243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26548062 - 26548167
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26548062 gttcttttatcgcttccatggttattcaatcggtttaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 26548161  T
Q  113 gttaat 118  Q
    ||||||    
T  26548162 gttaat 26548167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26551621 - 26551726
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26551621 gttcttttatcgcttccatggttattcaatcggtttaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactactta 26551720  T
Q  113 gttaat 118  Q
    ||||||    
T  26551721 gttaat 26551726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 28562509 - 28562404
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28562509 gttcttttatcgcttccgtggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 28562410  T
Q  113 gttaat 118  Q
    ||||||    
T  28562409 gttaat 28562404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 28566077 - 28565972
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28566077 gttcttttatcgcttccgtggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 28565978  T
Q  113 gttaat 118  Q
    ||||||    
T  28565977 gttaat 28565972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 34652897 - 34652800
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  34652897 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 34652800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 4731975 - 4731876
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||    
T  4731975 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactacttaattaat 4731876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 17944627 - 17944710
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaa 104  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17944627 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaa 17944710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 19689529 - 19689626
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||  ||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  19689529 atcgcttccatggttattcaatcggtttaagagattaaaaggttataacttagtaaagggttttgagtcaagagattgatcaaaactaattagttaat 19689626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 313
Target Start/End: Original strand, 26337963 - 26338256
Alignment:
Q  25 cttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcca 124  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | |     
T  26337963 cttccacggttattcaatcggcttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcg 26338062  T
Q  125 tagagttaggtga---acattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattc 220  Q
    || |  ||||| |    | || ||| | ||||   |||||||| |||| | || ||||||||||||| ||||||||||| |||||||||| |  || |      
T  26338063 taaacctaggttattttctttgagagataagagaggcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattat 26338162  T
Q  221 caaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacg 313  Q
    ||||||| |||| || | | | |||||| ||||| ||| ||||||| || |||||||| |||||||||||||||| ||||||||||||| |||||    
T  26338163 caaaccattttattttc-tgttatttactttttattgcaaccaaatccaactgcctagggcaacccataaatttaatacatcctttattctaacg 26338256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 35432619 - 35432442
Alignment:
Q  34 ttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttag 133  Q
    ||||||||||| ||||| ||||||| | |||||||| |  |||||| |||||||||||||||||||||||||||| | |||||||  | | || ||||||    
T  35432619 ttattcaatcgatttaagagattaagaggttataaccttggaaaggattttgagtcaagagattgatcaaaactaataagttaatccgtcgtaaagttag 35432520  T
Q  134 gtgaacattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgtttta 210  Q
    ||| ||||| |||   ||||  |||||||||||||||| || ||||||| ||||| ||||||||||| ||||||||||    
T  35432519 gtggacattgagagcaaagaggagcaaattattcacggtgagcaatagatgattcgaaaggcttgatcatctgtttta 35432442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 34405975 - 34406087
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||    
T  34405975 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtccttgtggatacgaactttattactacttcgatagcttttggt 34406073  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  34406074 acacttgccaaata 34406087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 36330741 - 36330914
Alignment:
Q  62 gttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaa 161  Q
    ||||||||||| ||||  |||||||||||| ||||||||||||||||||  ||||||  | | || ||||||||||||||| ||| ||||||  ||||||    
T  36330741 gttataacttaggaaatagttttgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggtgaacattgagagagaagaggagcaaa 36330840  T
Q  162 ttattcacggcgaacaatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaatt 235  Q
    |||||||| | |  ||| ||||||||| || | ||| | |||||||||| | ||| || |||||||||||||||    
T  36330841 ttattcacagtgcgcaacagaggattcgaaagtttgttcatctgttttaatctaattttcaaaccaatttaatt 36330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 26726914 - 26727007
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||||||| ||||||||||| || || ||||||| ||||||||||||| |||||    
T  26726914 gttcttttatcgcttccgcaattattcaatcggtttaagagattaaaaggttataacttaggacagagttttgattcaagagattgattaaaac 26727007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 25185355 - 25185432
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtca 90  Q
    |||||||| ||||||||||| ||||||| ||| ||||| ||||||||| ||||||||||| |||||||||||||||||    
T  25185355 gttctgttgtcgcttccgcgattattcattcgatttaagagattaaaaggttataacttaggaaagggttttgagtca 25185432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 36335210 - 36335037
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaat 162  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||  |||||     | || || |||||||||||| ||| ||||||  || ||||    
T  36335210 ttataacttaggaaagggttttgagtcaagagatttatcaaaactattaggttaaatcatcgtaaagctaggtgaacattgagagagaagatgagaaaat 36335111  T
Q  163 tattcacggcgaacaatagaggattcaaaggcttgattatctg-ttttattataaattccaaaccaatttaatt 235  Q
    |||||||   | ||| | |||||||| |||||||||| ||||| ||||| | ||| || |||||||||||||||    
T  36335110 tattcacaatgcacacttgaggattcgaaggcttgatcatctgtttttaatctaattttcaaaccaatttaatt 36335037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 14616510 - 14616437
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||||||||||| ||||||||||||||| ||  ||| || |||||||| ||||||| ||||||||||||    
T  14616510 agtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag-ttttggttcacttgccaaat 14616437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 7650060 - 7649950
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||| | |||||||||||||||||| ||||||| ||||||| ||  ||| || |||||||| |||||||    
T  7650060 ataaattta-tacatcctttttgataaagaaattgttgagtagaaattaacaacggtcctcgtgaatacgaatttatttattacttcgatag-ttttggt 7649963  T
Q  385 acacttgccaaat 397  Q
     |||||| |||||    
T  7649962 tcacttgtcaaat 7649950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 20077653 - 20077697
Alignment:
Q  74 gaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||    
T  20077653 gaaaaggttttgattcaagagattgatcaaaactattttgttaat 20077697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 26727252 - 26727292
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  26727252 tttattactacttcgatagttattggtacacttgccaaata 26727292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 313
Target Start/End: Complemental strand, 35432373 - 35432330
Alignment:
Q  270 tgcctagagcaacccataaatttactacatcctttattttaacg 313  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  35432373 tgcctagggcaacccataaatttaatacatcatttattttaacg 35432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 397
Target Start/End: Original strand, 36330976 - 36331074
Alignment:
Q  298 atcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||||  ||||| || ||| | |||||||||||||||||| |||||||||| | || ||||||| || ||||||||  || |||||||||| |||||    
T  36330976 atcctttaagttaacaaaattgttgagtagaaattaacaacggtcctcgtggatgcaaattttattattacttcgatag-attaggtacacttgtcaaat 36331074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 20056160 - 20056193
Alignment:
Q  362 ttactaattcgatagtttttggtacacttgccaa 395  Q
    |||||| |||||||||||||||||||||||||||    
T  20056160 ttactacttcgatagtttttggtacacttgccaa 20056193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 6964266 - 6964644
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| | ||||||| | || |    
T  6964266 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaaccacttagttattttgtc 6964365  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||   |||||||| |||| | || ||||||||||||| ||||||||||| |||||||||| |  || |     
T  6964366 gtaaagctaggttaatttctttgagagagaagagaggcaaattactcactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatta 6964465  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaactt 318  Q
     ||||||| |||| || | |   ||| |  |||||||| ||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  6964466 tcaaaccattttatttactttgtattaag-ttttatgcgaccaaatccaactacctagggcaacccataaatttactacatcctttattttaacgaactt 6964564  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  6964565 gctaagtagaaattaacaacggccctcgtggatacgaacttcattactacttcgatagtttttggtacacttaccaaata 6964644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 30 - 398
Target Start/End: Original strand, 38431378 - 38431750
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagag 129  Q
    ||||||||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||||||||||||||||||| | ||||||||| || | || ||    
T  38431378 gcggttattcaatcggtttaagagattaaaaggttataactgaggaaatggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaag 38431477  T
Q  130 ttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattccaaac 225  Q
     ||||| ||   | || ||| ||||||   | ||||||  ||| | || ||||||||||||| ||||||||||| |||||||||| | ||| |  |||||    
T  38431478 ctaggttaatttctttgagagagaagagaggaaaattacccactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatctaattatcaaac 38431577  T
Q  226 caatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaag 324  Q
    || |||| || | |   ||| |  ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  38431578 cattttatttactttatattaag-ttttatgcaaccaaatccaactgcctagggcaacccataaatttactacatcctttattttaactaacttgctaag 38431676  T
Q  325 tagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  38431677 tagaaattaacaacggtcctcatggatacgaactttattactacttcgatagcttttggtacactttccaaata 38431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 3541307 - 3540931
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| ||||||||||||| |||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | || ||||||  | |    
T  3541307 gcttccacggttattcaatcagtttcagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttggttaatccgtc 3541208  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaaggcttgattatctgttttattataaattc 220  Q
     || || ||||| ||   | || ||| ||||||   |||||||| ||||   || ||||||||||||| || ||||||| |||| ||||| |  || |      
T  3541207 gtaaagctaggttaatttctttgagagagaagagaggcaaattactcacaatgagcaatagaggattcgaaagcttgatcatctattttaatccaattat 3541108  T
Q  221 caaaccaatttaattgcatctcatttacattttat-gca-ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaactt 318  Q
    ||||||| |||| ||   | | |||||| |||||| ||| |||||| || |||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  3541107 caaaccattttattttt-tgttatttactttttattgcaaccaaatccaactgcttagggcaacccataaattaa-tacatcctttattttaacgaactt 3541010  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  3541009 gctaagtagaagttcacaacggtcctcgtggatacgaactttattactactttgatag-ttttggtacacttgccaaata 3540931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 397
Target Start/End: Original strand, 16546982 - 16547359
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| ||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  | |    
T  16546982 gcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatccgtc 16547081  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | ||  || ||||||   |||||||  |||| | || ||||||||||||| ||||||||||| || | ||||| |  || |     
T  16547082 gtaaagctaggttaatttctttgtgagagaagagaggcaaattcctcacagtgagcaatagaggattcgaaaggcttgatcattttttttagtccaattg 16547181  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     |||||| ||||  ||   | | |||||| ||||| ||| ||||||| || |||||||| ||||||| |||||||| |||||||||||||||||||   |    
T  16547182 tcaaacc-attttgttctctgttatttactttttattgcaaccaaatccaactgcctagggcaacccttaaatttaatacatcctttattttaacgcttt 16547280  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||  |||||||||| | |||   ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  16547281 tgccgagtagaaattga-aacaatccttgtggatacgaactttattactacttcgatagcttttggtacacttgccaaat 16547359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 397
Target Start/End: Complemental strand, 16618680 - 16618303
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| ||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  | |    
T  16618680 gcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatccgtc 16618581  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | ||  || ||||||   |||||||  |||| | || ||||||||||||| ||||||||||| || | ||||| |  || |     
T  16618580 gtaaagctaggttaatttctttgtgagagaagagaggcaaattcctcacagtgagcaatagaggattcgaaaggcttgatcattttttttagtccaattg 16618481  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     |||||| ||||  ||   | | |||||| ||||| ||| ||||||| || |||||||| ||||||| |||||||| |||||||||||||||||||   |    
T  16618480 tcaaacc-attttgttctctgttatttactttttattgcaaccaaatccaactgcctagggcaacccttaaatttaatacatcctttattttaacgcttt 16618382  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||  |||||||||| | |||   ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  16618381 tgccgagtagaaattga-aacaatccttgtggatacgaactttattactacttcgatagcttttggtacacttgccaaat 16618303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 22232771 - 22232672
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22232771 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactacttagttaat 22232672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 22253968 - 22254067
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22253968 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactacttagttaat 22254067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 22257232 - 22257331
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22257232 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactacttagttaat 22257331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 2349427 - 2349532
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  2349427 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaagggttttgagtcgagagattgatcaaaactactta 2349526  T
Q  113 gttaat 118  Q
    ||||||    
T  2349527 gttaat 2349532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 11825505 - 11825400
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  11825505 gttcttttatcgcttccgcggttattcaatcggtttaaaagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaatctactta 11825406  T
Q  113 gttaat 118  Q
    ||||||    
T  11825405 gttaat 11825400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 8257740 - 8257632
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |     
T  8257740 aatgttctgttattgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccac 8257641  T
Q  110 ttagttaat 118  Q
    |||||||||    
T  8257640 ttagttaat 8257632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 20100618 - 20100717
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  20100618 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 20100717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 748191 - 748086
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  748191 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaggagattgatcaaaactactta 748092  T
Q  113 gttaat 118  Q
    ||||||    
T  748091 gttaat 748086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 8257853 - 8257961
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    |||||||||  |||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||     
T  8257853 aatgttctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaa 8257952  T
Q  110 ttagttaat 118  Q
    |||||||||    
T  8257953 ttagttaat 8257961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 8397813 - 8397918
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||| ||| |||    
T  8397813 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttatagcttaggaaagggttttgagtcaagagattgatcaaatctactta 8397912  T
Q  113 gttaat 118  Q
    ||||||    
T  8397913 gttaat 8397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 23467310 - 23467213
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23467310 atcgctttcgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 23467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 5826852 - 5826753
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||| ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  5826852 ttatcgcttctgcggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 5826753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 43549172 - 43549266
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  43549172 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 43549266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 2251839 - 2251932
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  2251839 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 2251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 23598913 - 23598820
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  23598913 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 23598820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 26460439 - 26460526
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  26460439 ttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 26460526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 6967274 - 6967386
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  6967274 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggt 6967372  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  6967373 acacttgccaaata 6967386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 17866472 - 17866360
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  17866472 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggt 17866374  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  17866373 acacttgccaaata 17866360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26182270 - 26182375
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||| || ||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||     
T  26182270 gttcttttatcgcttctgcagttattcaatcagtttaagagattaaaaggttataacttaggaaagggttttgactcaagagattgatcaaaactaattt 26182369  T
Q  113 gttaat 118  Q
    ||||||    
T  26182370 gttaat 26182375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 17857962 - 17857887
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  17857962 agtagaaattaacaacggtcctcgtggatacgaactttattactatttcgatagcttttggtacacttgccaaata 17857887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 22083585 - 22083502
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaa 104  Q
    ||||||||||||||||||||||| | |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  22083585 atcgcttccgcggttattcaatctgcttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaa 22083502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 710156 - 710074
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||    
T  710156 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaaaggttttgattcaagagattgatcaaaac 710074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 44017931 - 44017837
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  44017931 gcttccgcgattattcaatcggtttaagagattaaaaggttataatttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 44017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 232
Target Start/End: Original strand, 26153131 - 26153342
Alignment:
Q  25 cttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcca 124  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||| ||||| |||||||||||||||||||||||| |||||||| | |||||||||  | |     
T  26153131 cttccgcagttattcaatcagtttaagagattaaaaggttatgacttaggaaagggttttgagtcaagagattaatcaaaaccacttagttaatccgtcg 26153230  T
Q  125 tagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattc 220  Q
    || || ||||| ||   | || ||| ||||||   |||||||| |||||| || |||||||| |||| ||||||||||| |||||||||| | ||| ||     
T  26153231 taaagctaggttaatttctttgagagagaagagaggcaaattactcacggtgagcaatagagaattcaaaaggcttgatcatctgttttaatctaatttt 26153330  T
Q  221 caaaccaattta 232  Q
    ||||||| ||||    
T  26153331 caaaccatttta 26153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 397
Target Start/End: Original strand, 17152173 - 17152310
Alignment:
Q  258 accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaac 357  Q
    ||||||| || |||||||| |||||||||||||||| |||||||||||||||||||   ||||  |||||||||| | ||| | |   |||||||| |||    
T  17152173 accaaatccaactgcctagggcaacccataaatttaatacatcctttattttaacgcttttgccgagtagaaattga-aacagtctctgtggatacaaac 17152271  T
Q  358 tttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||| |||||||| |||||||||||||| |||||    
T  17152272 tttattactacttcgatag-ttttggtacacttgtcaaat 17152310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 26808871 - 26808694
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatat 120  Q
    ||||||||| | |||||||||||  || || ||||||| | |||||||| ||  ||||| ||||||||||| |||||||||||||||| | |||||||      
T  26808871 atcgcttccacagttattcaatcactt-aagagattaagaggttataacctagaaaaggattttgagtcaaaagattgatcaaaactaataagttaatcc 26808773  T
Q  121 gccatagagttaggtgaacattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaaggcttgat 199  Q
    | | || |||||||||||||||  ||   ||||  |||||||||| ||||| || ||||||||||||| ||||||||||    
T  26808772 gtcgtaaagttaggtgaacattgggagcaaagaggagcaaattatgcacggtgagcaatagaggattcgaaggcttgat 26808694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 42606279 - 42606356
Alignment:
Q  40 aatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42606279 aatcgatttaagagattaaaaggt-ataatttaagaaagggttttgagtcaagagattgatcaaaactacttagttaat 42606356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 6214505 - 6214420
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||||  ||||||||||||||||||||||| ||| | |||||||    
T  6214505 gttattcaatcggtttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaagctaataagttaat 6214420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 23775868 - 23775950
Alignment:
Q  32 ggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagt 114  Q
    ||||||||||| ||||||| ||||||||  ||||||||||| ||||| |||||| |||||||||| ||| |||| || |||||    
T  23775868 ggttattcaattggtttaagagattaaattgttataacttaggaaagagttttgtgtcaagagatagatgaaaattaattagt 23775950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 396
Target Start/End: Complemental strand, 28577798 - 28577687
Alignment:
Q  283 ccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttg 382  Q
    ||||||||||| |||||| ||||| |||| ||| ||  | ||||||| |||||||||| |||||| |||| ||| || |||| |  |||||||| |||||    
T  28577798 ccataaatttaatacatc-tttatgttaatgaaattattgagtagaagttaacaacggtcctcgtagatatgaatttgattattgcttcgatag-ttttg 28577701  T
Q  383 gtacacttgccaaa 396  Q
    ||||||||||||||    
T  28577700 gtacacttgccaaa 28577687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 709830 - 709790
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  709830 tttattactacttcgatagttattggtacacttgccaaata 709790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 2252177 - 2252217
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  2252177 tttattactacttcgatagttattggtacacttgccaaata 2252217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 23598575 - 23598535
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  23598575 tttattactacttcgatagttattggtacacttgccaaata 23598535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 28578017 - 28577913
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaat 162  Q
    ||||||| || ||||| ||||||| |||||||||||||||||||||||  ||||||  | |||| || ||||| ||| || ||| ||||||   ||||||    
T  28578017 ttataacctaggaaagagttttgactcaagagattgatcaaaactattaggttaatccgtcataaagctaggttaactttgagagagaagaggggcaaat 28577918  T
Q  163 tattc 167  Q
    |||||    
T  28577917 tattc 28577913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 397
Target Start/End: Complemental strand, 36843032 - 36842945
Alignment:
Q  309 taacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||| ||||| |||||||||||||||||| ||| |||||| ||| |||  ||| || |||||||  ||||||| ||||||||||||    
T  36843032 taacgaaattgctgagtagaaattaacaacggtccttgtggattcgatcttatttattacttcgata-attttggttcacttgccaaat 36842945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 20100950 - 20100989
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  20100950 tttattactacttcgatagttattggtacacttgccaaat 20100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 42859008 - 42859054
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  42859008 ttataacttaggaaagg-ttttgactcaagagattgatcaaaactatt 42859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 24783573 - 24783646
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||||||||||| |||||||||||| || ||  ||| || |||||||| ||||||| |||||| |||||    
T  24783573 agtagaaattaacaacggtcctcgtggatacaaatttatttattacttcgatag-ttttggttcacttgtcaaat 24783646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 30058234 - 30058196
Alignment:
Q  80 gttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  30058234 gttttgagtcaagggattgatcaaaactattttgttaat 30058196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 398
Target Start/End: Original strand, 9765912 - 9766039
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaa 368  Q
    |||||||| |||||| | ||||||| ||||||||||    ||| |||  |||| ||||||||||||||||||||||  ||||| ||| |||  ||| ||     
T  9765912 ctgcctagggcaacc-agaaatttaatacatccttttcgataaagaaaatgctgagtagaaattaacaacggcccttatggattcgatcttatttattac 9766010  T
Q  369 ttcgatagtttttggtacacttgccaaata 398  Q
    |||||||| |||||||  ||||||||||||    
T  9766011 ttcgatag-ttttggttaacttgccaaata 9766039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 17601686 - 17601747
Alignment:
Q  47 ttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaacta 108  Q
    |||| ||||||| | ||||||||||| ||| ||||||||| | | |||||||||||||||||    
T  17601686 ttaagagattaagaggttataacttaggaacgggttttgacttaggagattgatcaaaacta 17601747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 17601877 - 17601950
Alignment:
Q  283 ccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaa 356  Q
    ||||||||||| ||||||||||| |||||| || ||| | | |||||||||||||  | ||| |||||||||||    
T  17601877 ccataaatttaatacatcctttagtttaacaaaattgatgattagaaattaacaatagtccttgtggatacgaa 17601950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 26460771 - 26460808
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  26460771 tttattactacttcgatagttattggtacacttgccaa 26460808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 26 - 398
Target Start/End: Complemental strand, 34552821 - 34552445
Alignment:
Q  26 ttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccat 125  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||| || | |    
T  34552821 ttccgcggttattcaatcggtttaagagattaaaaggttataactttggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgt 34552722  T
Q  126 agagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattcc 221  Q
    | || ||||| ||   | |||||| ||||||   |||||||| |||||| || ||||||||||||| ||||||||||| ||||| |||| |  || |  |    
T  34552721 aaagctaggttaatttctttaagagagaagagaggcaaattactcacggtgagcaatagaggattcgaaaggcttgatcatctgctttaatccaattatc 34552622  T
Q  222 aaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaactt 318  Q
    |||||| |||| || | |    ||||| ||||||  | |||||| || |||||||| ||||||| ||||| ||||||||||||||||||||||| |||||    
T  34552621 aaaccattttatttactttg--tttacgttttataaaaccaaatccaactgcctagggcaaccccataaaatttactacatcctttattttaacaaactt 34552524  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  34552523 gctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag-ttttggtacacttgtcaaata 34552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 24 - 395
Target Start/End: Original strand, 18392372 - 18392747
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| || |    
T  18392372 gcttccgcggttattcaatcggtttaagag-ttaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtc 18392470  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||   |||||||| ||| || || ||||||||||||| ||||||||||| |||||||||| |  || |     
T  18392471 gtaaagctaggttaatttctttgagagagaagataggcaaattactcatggtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatta 18392570  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaac 316  Q
     ||||||| |||| || | |    ||||| ||||||  | |||||| || ||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||    
T  18392571 tcaaaccattttatttactttg--tttacgttttataaaaccaaatccaactggctagggcaaccccataaaatttactagatcctttattttaacaaac 18392668  T
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  18392669 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaa 18392747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 6205859 - 6206238
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggtttt-gagtcaagagattgatcaaaactatttagttaatatgc 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  | ||||||||| ||     
T  6205859 gcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaagggtttttgagtcaagagattgatcaaaatcacttagttaatttgt 6205958  T
Q  123 catagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaa-ggcttgattatctgttttattataaat 218  Q
    | || || ||||| ||   | || ||| ||||||    ||||||| |||||| || |||||||||||||||| |||||||| |||||||||| |  || |    
T  6205959 cgtaaagctaggttaatttctttgagagagaagagagccaaattactcacggtgagcaatagaggattcaaaaggcttgatcatctgttttaatccaatt 6206058  T
Q  219 tccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaacccat--aaatttactacatcctttattttaacgaa 315  Q
      ||||||| |||| || | |    ||||| ||||||  | ||||||  | || ||||| |||||||    |||||||||||||||||||||||||||||    
T  6206059 atcaaaccattttatttactttg--tttacgttttataaaaccaaatcgaactacctagggcaaccctgtcaaatttactacatcctttattttaacgaa 6206156  T
Q  316 cttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||  |||| |||||||||| |||||    
T  6206157 cttgttaagtagaaattaacaacggttctcgtggatacgaactttattactacttcgata-attttagtacacttgctaaata 6206238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 49716589 - 49716721
Alignment:
Q  260 caaattcagctgcctagagcaacccataaa-tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaact 358  Q
    ||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49716589 caaatccaactgcctagggcaacccataaaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacgaact 49716688  T
Q  359 ttattactaattcgatagtttttggtacacttg 391  Q
    |||||| || |||||||||||||||||||||||    
T  49716689 ttattattacttcgatagtttttggtacacttg 49716721  T

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Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 272 - 391
Target Start/End: Original strand, 49720083 - 49720203
Alignment:
Q  272 cctagagcaacccataaa-tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaatt 370  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  49720083 cctagggcaacccataaaatttactacaccctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacgaactttattattactt 49720182  T
Q  371 cgatagtttttggtacacttg 391  Q
    |||||||||||||||||||||    
T  49720183 cgatagtttttggtacacttg 49720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 17902929 - 17902833
Alignment:
Q  22 tcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17902929 tcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 17902833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 49716349 - 49716446
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  49716349 atcgcttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 49716446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 49719831 - 49719928
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  49719831 atcgcttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 49719928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 28918350 - 28918448
Alignment:
Q  20 tatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| ||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  28918350 tatcgtttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 28918448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 50197098 - 50197004
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  50197098 gcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccatttagttaat 50197004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 20981328 - 20981433
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||| |||    
T  20981328 gttctgatattgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaaggattttgattcaagagattgatcaaaactactta 20981427  T
Q  113 gttaat 118  Q
    ||||||    
T  20981428 gttaat 20981433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 37641836 - 37641941
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| || |||||||| || ||||||||||||||||||||||||||||||| ||| |||    
T  37641836 gttcttttatcgcttccgcggttattcaatcggtttaagagattacaaggttataacctaggaaagggttttgagtcaagagattgatcaaatctactta 37641935  T
Q  113 gttaat 118  Q
    ||||||    
T  37641936 gttaat 37641941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 33898305 - 33898399
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  33898305 gcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 33898399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 10765046 - 10765158
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  10765046 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggt 10765144  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  10765145 acacttgccaaata 10765158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 13493389 - 13493501
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  13493389 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggt 13493487  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  13493488 acacttgccaaata 13493501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 20964425 - 20964540
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    |||||| ||| |||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||| |||    
T  20964425 gttctgatattgcttccgcagttattcaattggtttaagagattaaaaggttataacttaggaaaggg-tttgattcaagagattgatcaaaactactta 20964523  T
Q  113 gttaatatgccatagag 129  Q
    |||||| || |||||||    
T  20964524 gttaatttgtcatagag 20964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 16839078 - 16838991
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  16839078 ttattgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 16838991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 16849008 - 16848921
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  16849008 ttattgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 16848921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 23441423 - 23441329
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||| ||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  23441423 gcttccgcgattattcattcggtttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 23441329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 24200394 - 24200301
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| |||| ||||  |||||||||| ||||||||||||| |||||||||||||||||||    
T  24200394 gttcttttatcgcttccgcagttattcaatcggtttaagagataaaaagattataacttaggaaagggttttgattcaagagattgatcaaaac 24200301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 3087862 - 3087770
Alignment:
Q  26 ttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||  |||| |||||||||| |||||||||||||||| | |||||||||    
T  3087862 ttccgcagttattcaatcggtttaagagattaaaaggttataacttagtaaagagttttgagtcgagagattgatcaaaaccacttagttaat 3087770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 50196803 - 50196722
Alignment:
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||| || ||||||||||| |||||||||||| || ||||||| || ||| ||||||||||||||||||||||||||    
T  50196803 ttgctaagttgagattaacaacggtcctcgtggatacaaattttattattacttcaatagtttttggtacacttgccaaata 50196722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 13496114 - 13496224
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| ||||||||||||||| ||  ||| || |||||||| |||||||    
T  13496114 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag-ttttggt 13496211  T
Q  385 acacttgccaaat 397  Q
     |||||| |||||    
T  13496212 tcacttgtcaaat 13496224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 17902600 - 17902560
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  17902600 tttattactacttcgatagttattggtacacttgccaaata 17902560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 20981665 - 20981705
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  20981665 tttattactacttcgatagttattggtacacttgccaaata 20981705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 24200056 - 24200017
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  24200056 tttattactacttcgatagttattggtacacttgccaaat 24200017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 5317931 - 5317893
Alignment:
Q  80 gttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  5317931 gttttgattcaagagattgatcaaaactattttgttaat 5317893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 16838746 - 16838709
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  16838746 tttattactacttcgatagttattggtacacttgccaa 16838709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 16848676 - 16848639
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  16848676 tttattactacttcgatagttattggtacacttgccaa 16848639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 37642167 - 37642207
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  37642167 tttattactacttcgatagttattggtacacttgtcaaata 37642207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 7e-62; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 39660096 - 39659719
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | | ||| ||| || |    
T  39660096 gcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccactaagt-aatttgtc 39659998  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||    ||||||| |||||| || ||||||||||||| ||||||| ||| |||||||||| |  || |     
T  39659997 gtaaagctaggttaatttctttgagagagaagagagccaaattactcacggtgagcaatagaggattcgaaaggctagatcatctgttttaatccaatta 39659898  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaac 316  Q
     ||||||| |||| || | |    ||||| ||||||  | |||||| || |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  39659897 tcaaaccattttatttactttg--tttacgttttataaaaccaaatccaactgcctagggcaaccccataaaatttactacatcctttattttaacgaac 39659800  T
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  39659799 ttgctaagtagaaattaacaatggtcctcgtggatacgaactttattactacttcgatag-tttcggtacacttgccaaata 39659719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 380
Target Start/End: Original strand, 13332068 - 13332428
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| || |    
T  13332068 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtc 13332167  T
Q  124 atagagttaggtgaa--cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattc 220  Q
     || || ||||| ||    || ||| ||||||  |  |||||| |||||| || ||||||||||||| ||||||||||| || ||||||| |  || |      
T  13332168 gtaaagctaggttaattttttgagagagaagagaacaaaattactcacggtgagcaatagaggattcgaaaggcttgatcatatgttttaattcaattat 13332267  T
Q  221 caaaccaatttaattgcatctcatttacattttat-gcaccaaattcagctgcctagagcaa-cccat-aaatttactacatcctttattttaacgaact 317  Q
    ||||||| |||| ||  |  |  ||||| ||||||   | ||||| || |||||||| |||| ||||| |||||||||||||||||||||||||||||||    
T  13332268 caaaccattttattt--actttgtttacgttttataaaatcaaatccaactgcctagggcaaccccataaaatttactacatcctttattttaacgaact 13332365  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttt 380  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  13332366 tgctaagtataaattaacaacggtcctcatggatacaaactttattactacttcgatagtttt 13332428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 259 - 398
Target Start/End: Original strand, 9467283 - 9467422
Alignment:
Q  259 ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaact 358  Q
    |||||| || |||||||| ||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9467283 ccaaatccaactgcctagggcaattgataaatttactacatcctttattttaacgaacttgctaagaagaaattaacaacggtcctcgtggatacgaact 9467382  T
Q  359 ttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  9467383 ttattactacttcgatagcttttggtacacttgccaaata 9467422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 258 - 398
Target Start/End: Original strand, 453803 - 453944
Alignment:
Q  258 accaaattcagctgcctagagcaacccataaa-tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaa 356  Q
    ||||||| || |||||| | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  453803 accaaatccaactgcctggggcaacccataaaatttactaaatcctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacgaa 453902  T
Q  357 ctttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||| || ||| ||||||||||||||||||| ||||||    
T  453903 ctttattagtacttccatagtttttggtacacttgtcaaata 453944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 398
Target Start/End: Original strand, 5828013 - 5828384
Alignment:
Q  31 cggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagt 130  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||      || ||     
T  5828013 cggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatcctttgtaaagc 5828112  T
Q  131 taggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattccaaacc 226  Q
    ||||| ||   | || ||| ||||||   |||||||| ||||   || ||||||||||||| ||||||||||| || ||||||| |  || |  ||||||    
T  5828113 taggttaatttctttgagagagaagagaggcaaattactcacactgagcaatagaggattcgaaaggcttgatgatatgttttaatccaattatcaaacc 5828212  T
Q  227 aatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaag 324  Q
    | |||| || | | | |||||| ||||| ||| ||||||| || |||||||| |||||||||||||||| | |||||||||||||||||   |||   ||    
T  5828213 attttattttc-tgttatttactttttattgcaaccaaatccaactgcctagggcaacccataaatttaatgcatcctttattttaacgcttttgacgag 5828311  T
Q  325 tagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||| | ||| | ||  |||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  5828312 tagaaattga-aacagtccatgtggatacgaactttactactacttcgatagcttttggtacacttgccaaata 5828384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 20262532 - 20262629
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20262532 atcgcttccgcggttattcaatcggattaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactaattagttaat 20262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 21049162 - 21049259
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21049162 atcgcttccgcggttattcaatcggattaagagattaaaaggttataacttaagaaagggttttgagtcaagagattgatcaaaactaattagttaat 21049259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 14187976 - 14188075
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14187976 ttatggcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 14188075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 22654237 - 22654336
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  22654237 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataatttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 22654336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 5964225 - 5964330
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||| |||    
T  5964225 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaatctactta 5964324  T
Q  113 gttaat 118  Q
    ||||||    
T  5964325 gttaat 5964330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 27863704 - 27863599
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| ||||| ||||| || ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27863704 gttcttttatctcttccacgattattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactattta 27863605  T
Q  113 gttaat 118  Q
    ||||||    
T  27863604 gttaat 27863599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 30645450 - 30645547
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30645450 atcgcttccacggttattcaatcggtttaaaagattaaaaggttagaacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 30645547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 17013185 - 17013089
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  17013185 aatgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 17013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 18696128 - 18696020
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    |||||||||  ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||     
T  18696128 aatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttcgagtcaagagattgatcaaaactac 18696029  T
Q  110 ttagttaat 118  Q
    |||||||||    
T  18696028 ttagttaat 18696020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 17544016 - 17544112
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  17544016 aatgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagatattgatcaaaac 17544112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 24903626 - 24903541
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  24903626 atcgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 24903541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 31981325 - 31981422
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||| || ||||||||||||||||||| |||||||||  | || ||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  31981325 atcgctttcgtggttattcaatcggtttaagagattaaaagatcattacttatgaaagggttttgaatcaagagattgatcaaaactaattagttaat 31981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 24435000 - 24435091
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaa 104  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||| || |||| |||||||| |||||||||||| ||||    
T  24435000 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaaggttttgattcaagagattgaccaaa 24435091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 24445046 - 24445137
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaa 104  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||| || |||| |||||||| |||||||||||| ||||    
T  24445046 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaaggttttgattcaagagattgaccaaa 24445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 587302 - 587387
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||| ||||| ||||||||| |||||||| || ||||||| ||||||||||||||||||||||| ||| | |||||||    
T  587302 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaagctaataagttaat 587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 626620 - 626535
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||| ||||| ||||||||| |||||||| || ||||||| ||||||||||||||||||||||| ||| | |||||||    
T  626620 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaagctaataagttaat 626535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 31986294 - 31986349
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  31986294 ttattacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 31986349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 453624 - 453662
Alignment:
Q  80 gttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  453624 gttttgagtcaagagattgatcaaaactacttagttaat 453662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 398
Target Start/End: Complemental strand, 12575416 - 12575307
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtaca 387  Q
    |||||| |||||||||| |  ||| ||||||| | ||||||| |||||||| | ||||||||||||||| ||  ||| || |||||| |  |||||||||    
T  12575416 aatttaatacatcctttttaataatgaacttgttgagtagaagttaacaacagtcctcgtggatacgaa-ttatttattacttcgattgaatttggtaca 12575318  T
Q  388 cttgccaaata 398  Q
    |||||||||||    
T  12575317 cttgccaaata 12575307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 24903297 - 24903257
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  24903297 tttattactacttcgatagttattggtacacttgccaaata 24903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 5980122 - 5980067
Alignment:
Q  342 cctcgtggatacgaactt-tattactaattcgatagtttttggtacacttgccaaa 396  Q
    |||||||||||||||||| | ||| || ||||||||||||||||||||||| ||||    
T  5980122 cctcgtggatacgaacttatgttattacttcgatagtttttggtacacttgtcaaa 5980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 17931296 - 17931329
Alignment:
Q  362 ttactaattcgatagtttttggtacacttgccaa 395  Q
    |||||| |||||||||||||||||||||||||||    
T  17931296 ttactacttcgatagtttttggtacacttgccaa 17931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 362 - 398
Target Start/End: Complemental strand, 17012840 - 17012804
Alignment:
Q  362 ttactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||| |||||||||| |||||||||||||||||||    
T  17012840 ttactacttcgatagttattggtacacttgccaaata 17012804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 17544361 - 17544397
Alignment:
Q  362 ttactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||| |||||||||| |||||||||||||||||||    
T  17544361 ttactacttcgatagttattggtacacttgccaaata 17544397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 31468213 - 31468169
Alignment:
Q  74 gaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| ||||||| ||||||||||||| ||||||||| |||||||    
T  31468213 gaaagtgttttgactcaagagattgatgaaaactattgagttaat 31468169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 13979113 - 13979490
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | |    
T  13979113 gcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtc 13979212  T
Q  124 atagagttaggtgaa--cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattc 220  Q
     || || ||||| ||    || ||| ||||||   |||||||| |||| | |||||||||||||||| ||||||||||| |||||||||| |  || |      
T  13979213 gtaaagctaggttaatttcttgagagagaagagaggcaaattactcacagtgaacaatagaggattcgaaaggcttgatcatctgttttaatccaattat 13979312  T
Q  221 caaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaactt 318  Q
    ||||||| |||| || | | | |||||| ||||| ||| ||||||| || |||||||| | ||||||||||||||||||||||||||| | |||||||||    
T  13979313 caaaccattttattttc-tgttatttactttttattgcaaccaaatccaactgcctagggtaacccataaatttactacatcctttatgtcaacgaactt 13979411  T
Q  319 gctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||| |||||||||||| ||| ||||| || |  |||||||||| |||| ||||| || ||||||||||||||||    
T  13979412 gctaagtaggaattaacaacggtccttgtgga-acaatatttattactacttcgttagttattagtacacttgccaaata 13979490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 24 - 397
Target Start/End: Original strand, 15851152 - 15851529
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||| |||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||| || |    
T  15851152 gcttccgcgattattcaatctgtttaagagattaaaaggttataacttaggaaagggttttgagtcaaaagattgatcaaaaccacttagttaatttgtc 15851251  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaa-ggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||    ||||||| |||||| || |||||||||||||||| |||||||| ||||||||||    || |     
T  15851252 gtaaagctaggttaatttctttgagagagaagagagccaaattactcacggagagcaatagaggattcaaaaggcttgatcatctgttttaacccaatta 15851351  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaac 316  Q
     ||||||| |||| || | |    ||||| ||||||  | |||||| || | |||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  15851352 tcaaaccattttatttactttg--tttacgttttataaaaccaaatccaacagcctagggcaaccccataaaatttactacatcctttattttaacgaac 15851449  T
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || || |||||||| ||||||||||||||||||||    
T  15851450 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttactattacttcgatag-ttttggtacacttgccaaat 15851529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 273 - 398
Target Start/End: Complemental strand, 33400207 - 33400082
Alignment:
Q  273 ctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcg 372  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||  |||    
T  33400207 ctagggcaacccataaatttattacatcctttattttaacgaacttgctaagcagaaattaacaacggttctcgtggatacgaactttattactacctcg 33400108  T
Q  373 atagtttttggtacacttgccaaata 398  Q
    |||| |||||||||||||||||||||    
T  33400107 atagcttttggtacacttgccaaata 33400082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 19928859 - 19929235
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | |    
T  19928859 gcttccgcggttattcaatcggtttaagatattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtc 19928958  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgtttt-attataaat 218  Q
     || |||||||| ||   | || ||| ||||||   |||||||| |||| | || ||||||||||||| ||||||||||| ||||||||| | |  || |    
T  19928959 gtaaagttaggttaatttctttgagagagaagagaggcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaaatccaatt 19929058  T
Q  219 tccaaaccaatttaattgcatctcatttacattttatgcaccaaattcagctgcctagagcaacccat-aaatttactacatcctttattttaacgaact 317  Q
      ||||||| |||| || | | | |||||  ||||||||||  ||  |  ||||||  ||  ||  || |||||||| ||||||||||| | || |||||    
T  19929059 atcaaaccattttattttc-tgttatttaatttttatgcacacaaacctactgcct-caggcacttataaaatttac-acatcctttatgtcaaagaact 19929155  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||||||||||||||| ||||||||| ||||  |||||||||| |||||||||| |||||||||||||||||||    
T  19929156 tgctaagtagaaattaacaacggtcctcgtgga-acgatatttattactacttcgatagttattggtacacttgccaaata 19929235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 18859753 - 18859852
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  18859753 ttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 18859852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 10247792 - 10247889
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  10247792 atcgcttccgcggttattcaaccagtttaaaagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaactaattagttaat 10247889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 11702729 - 11702632
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  11702729 atcgcttccgcggttattcaatcagtttaagagattaaaaggttttaacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 11702632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 14701882 - 14701967
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  14701882 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 14701967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 49636668 - 49636581
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  49636668 ttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 49636581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 23653254 - 23653348
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||    
T  23653254 gcttccacggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaaaaaattgatcaaaactaattagttaat 23653348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 26703630 - 26703536
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||    
T  26703630 gcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaaccacttagttaat 26703536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 3719646 - 3719553
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  3719646 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattgaagagattgatcaaaac 3719553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 647322 - 647210
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||    
T  647322 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagcttttggt 647224  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  647223 acacttgccaaata 647210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 650557 - 650482
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  650557 agtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagcttttggtacacttgccaaata 650482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 3734287 - 3734374
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||||||||  |||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  3734287 ttatcgcttccgcaattattcaatcagtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 3734374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 49639961 - 49639874
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||||||||  |||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  49639961 ttatcgcttccgcaattattcaatcagtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 49639874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 10385917 - 10386018
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatat 120  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||       ||||||||||||||||||||||||||||||||||| ||||||||| |    
T  10385917 atcgcttctgcggttattcaatcggtttaagagattaaaaggttat-------gaaagggttttgagtcaagagattgatcaaaactaattagttaattt 10386009  T
Q  121 gccatagag 129  Q
    | |||||||    
T  10386010 gtcatagag 10386018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 398
Target Start/End: Original strand, 37176855 - 37176992
Alignment:
Q  258 accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaac 357  Q
    ||||||| || ||| |||| |||||||||||||||| ||||||||||||||||| |   ||||  |||||||||| | ||| | ||| ||||||||||||    
T  37176855 accaaatccaactgtctagggcaacccataaatttaatacatcctttattttaaagcttttgccgagtagaaattga-aacagtccttgtggatacgaac 37176953  T
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  37176954 tttattacta--tcgatagcttttggtacacttgccaaata 37176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 33400470 - 33400392
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattga 99  Q
    |||||||||||| |||||||||||||| || ||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  33400470 atcgcttccgcgattattcaatcggttgaagagattaaaaggttataacttaggaaagagttttgagtcaagagattga 33400392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 17670309 - 17670386
Alignment:
Q  41 atcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||| | |||||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  17670309 atcggtttaagatattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttaattaat 17670386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 11560799 - 11560886
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||| ||||||||| |||||| |||||||||    
T  11560799 gcggttgttcaatcggtttaagagattaataggttataacttaggaaagagttttgagtcaaaagattgatc-aaactaattagttaat 11560886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 24605377 - 24605307
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaa 103  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||||| ||||| ||||||||||||||||    
T  24605377 gttattcaatcggtttaagagattaaaaggttataacctaggaaagggctttgattcaagagattgatcaa 24605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 7395000 - 7394916
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||| |||| ||||||||||||||||||||||| ||| | |||||||    
T  7395000 gttaatcaatcggtttaagagattaaaaggttataact-aagatagggctttgagtcaagagattgatcaaagctaataagttaat 7394916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 39050602 - 39050649
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  39050602 ttataatttaagaaagggttttgactcaaaagattgatcaaaactatt 39050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 21217600 - 21217499
Alignment:
Q  131 taggtgaacattaagatagaagactagcaaattattcacggcgaacaatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatt 230  Q
    ||||| |||||| ||| ||||||  | |||||||||||| | |  ||||||||||||  |||| |||||||||||||||| | ||| || ||||||||||    
T  21217600 taggttaacattgagagagaagaaaatcaaattattcacagtgcgcaatagaggatttgaaggattgattatctgttttaatctaattttcaaaccaatt 21217501  T
Q  231 ta 232  Q
    ||    
T  21217500 ta 21217499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 3719308 - 3719268
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  3719308 tttattactacttcgatagttattggtacacttgccaaata 3719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 3734619 - 3734656
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  3734619 tttattactacttcgatagttattggtacacttgccaa 3734656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 12172099 - 12172211
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||||||||||| ||||  || | ||||||||| |||| |||| ||| || |||||| |  ||||||    
T  12172099 ataaattta-tacatcctttttaataatgaaattgctaagtagaagttaaatacagtcctcgtggaaacgatcttttttattacttcgatcgaatttggt 12172197  T
Q  385 acacttgccaaata 398  Q
     |||||||||||||    
T  12172198 tcacttgccaaata 12172211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 21217416 - 21217359
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttt 380  Q
    |||||||||||| ||||| ||||||| ||||||| ||||||| || || |||||||||    
T  21217416 agtagaaattaataacggtcctcgtgaatacgaattttattattactttgatagtttt 21217359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 49639629 - 49639592
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  49639629 tttattactacttcgatagttattggtacacttgccaa 49639592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 362 - 394
Target Start/End: Complemental strand, 8871513 - 8871481
Alignment:
Q  362 ttactaattcgatagtttttggtacacttgcca 394  Q
    |||||| ||||||||||||||||||||||||||    
T  8871513 ttactacttcgatagtttttggtacacttgcca 8871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 11561123 - 11561159
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgcca 394  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  11561123 tttattactacttcgatagttttttgtacacttgcca 11561159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 26062808 - 26062698
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggc--cctcgtggatacgaactttattactaattcgatagtttttggta 385  Q
    |||||| |||||||||| |  ||| ||| ||| | ||||||| ||||||||||   ||||||||||||||| ||  ||| || |||||||| |||||||     
T  26062808 aatttaatacatcctttttgataaagaaattgttgagtagaagttaacaacggggtcctcgtggatacgaatttatttattatttcgatag-ttttggtt 26062710  T
Q  386 cacttgccaaat 397  Q
    ||||||||||||    
T  26062709 cacttgccaaat 26062698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 398
Target Start/End: Complemental strand, 19894 - 19516
Alignment:
Q  25 cttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcca 124  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    |     
T  19894 cttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaattcttcg 19795  T
Q  125 tagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattc 220  Q
    || || ||||| ||   | || ||| ||||||   |||||||| |||  | || |||||||| |||| |||| |||||| |||||||||| |  || |      
T  19794 taaagctaggttaatttctttgagagagaagagaggcaaattactcattgtgagcaatagagtattcgaaagtcttgatcatctgttttaatccaattat 19695  T
Q  221 caaaccaatttaattgcatctcatttacattttat-gca-ccaaattcagctgcctagagcaaccc-ataaa-tttactacatcctttattttaacgaac 316  Q
    ||||||| |||| || | | | ||| || |||||| ||| |||||| || |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  19694 caaaccattttattttc-tgttatt-actttttattgcaaccaaatccaactgcctagggcaaccccataaaatttactacatcctttattttaacgaac 19597  T
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || || || |||||||||||||||||||||    
T  19596 ttgctaagtagaaattaacaacggtcctcgtggatacgaactttattactactttgacag-ttttggtacacttgccaaata 19516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 26 - 360
Target Start/End: Complemental strand, 35027270 - 35026932
Alignment:
Q  26 ttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccat 125  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| || | |    
T  35027270 ttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatctgtcgt 35027171  T
Q  126 agagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattcc 221  Q
    | || ||||| ||   | || ||| ||||||   |||||||| |||  | || ||||||||||||| ||||||||||| |||||||||| |  || |  |    
T  35027170 aaagctaggttaatttctttgagagagaagagaggcaaattactcatagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatc 35027071  T
Q  222 aaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttg 319  Q
    |||||| |||| || |  |    |||| ||||| ||| ||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  35027070 aaaccattttattttc--cgttattactttttattgcaaccaaatccaactgcctagggcaacccataaatttaatacatcctttattttaacgaacttg 35026973  T
Q  320 ctaagtagaaattaacaacggccctcgtggatacgaacttt 360  Q
     |||||||||||||||||||  ||| |||||||||||||||    
T  35026972 ttaagtagaaattaacaacgttccttgtggatacgaacttt 35026932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 12746785 - 12747166
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaa---gattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatat 120  Q
    |||||| |||||||||||||||||||| |   |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||      
T  12746785 gcttccacggttattcaatcggtttaataagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatcc 12746884  T
Q  121 gccatagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataa 216  Q
    | | || || ||||| ||   | || ||| ||||||   |||||||| ||||   || ||||||||||||  ||||||||||| |||||||||| |  ||    
T  12746885 gtcgtaaagctaggttaatttctttgagagagaagagaggcaaattactcacaatgagcaatagaggatttgaaaggcttgatcatctgttttaatccaa 12746984  T
Q  217 attccaaaccaatttaattgcatctcatttacattttat-gca-ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacga 314  Q
     |  ||||||| |||| || | | | ||| || |||||| ||| |||||| || |||||||| |||||||||||||||| |||||||||||||||||||     
T  12746985 ttatcaaaccattttattttc-tgttattcactttttattgcaaccaaatccaactgcctagggcaacccataaatttaatacatcctttattttaacgc 12747083  T
Q  315 acttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
      ||||  |||||||||| | ||| | ||| |||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  12747084 ttttgccgagtagaaattga-aacagtccttgtggatacgaactttattactacttcgatagcttttggtacacttgtcaaata 12747166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 11410990 - 11411113
Alignment:
Q  269 ctgcctagagcaacccataaa-tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattacta 367  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||    
T  11410990 ctgcctagggcaacccataaaatttactacatcctttattttaacgaacttgctaagtagaaattaacaatggtactcgtggatacgaactttattatta 11411089  T
Q  368 attcgatagtttttggtacacttg 391  Q
     |||||||||||||||||||||||    
T  11411090 cttcgatagtttttggtacacttg 11411113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 28894620 - 28894242
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||   ||    
T  28894620 gcttctgcggttattcaattggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccacatagttaatccacc 28894521  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||   |||||||| |||| | || |||||||| |||| ||| ||||||| |||||||||| |  || |     
T  28894520 gtaaagctaggttaatttctttgagagagaagagaggcaaattactcacagtgagcaatagagaattcaaaatgcttgatcatctgttttaatccaatta 28894421  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     ||||||| |||| || | | | |||||| ||||| ||| |||||||  | |||||||| |||||||||||||||| |||||||||||||||||||   |    
T  28894420 tcaaaccattttattttc-tgttatttactttttattgcaaccaaatctaactgcctagggcaacccataaatttaatacatcctttattttaacgtttt 28894322  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||  |||||||||| | ||| | ||  |||||||||||||||||||||| |||||||| ||||| |||||||| ||||||    
T  28894321 tgccgagtagaaattga-aacagtccatgtggatacgaactttattactacttcgatagcttttgttacacttgtcaaata 28894242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 272 - 398
Target Start/End: Complemental strand, 33679076 - 33678948
Alignment:
Q  272 cctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattc 371  Q
    ||||| |||||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| |||    
T  33679076 cctagggcaacccataaatttcatacatcctttattttaactaacttgttaagtagaaattaacaacggtcctcgtggatatgaactttagtactacttc 33678977  T
Q  372 gatagt--ttttggtacacttgccaaata 398  Q
    ||||||  |||||||||||||||||||||    
T  33678976 gatagtttttttggtacacttgccaaata 33678948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 34502319 - 34502416
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  34502319 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 34502416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 11410741 - 11410838
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  11410741 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactccttagttaat 11410838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 5618359 - 5618262
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  5618359 atcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtgaagagattgatcaaaactaattagttaat 5618262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 14966199 - 14966304
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||| ||||||||||||||||||||||| ||| |||    
T  14966199 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacctaggaaaggggtttgagtcaagagattgatcaaatctactta 14966298  T
Q  113 gttaat 118  Q
    ||||||    
T  14966299 gttaat 14966304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 14969679 - 14969784
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||||| |||||||||||||||||||||||| ||| |||    
T  14969679 gttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacctatgaaaggattttgagtcaagagattgatcaaatctactta 14969778  T
Q  113 gttaat 118  Q
    ||||||    
T  14969779 gttaat 14969784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 17231832 - 17231929
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17231832 atcgcttccgcggttattcaattagtttaagagattaaaaggttatgacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 17231929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 28117816 - 28117913
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||    
T  28117816 atcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaat 28117913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 3826951 - 3826863
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  3826951 gcggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 3826863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 31123418 - 31123506
Alignment:
Q  30 gcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  31123418 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagttaagagattgatcaaaactaattagttaat 31123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 15579054 - 15578960
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  15579054 gcttccgtggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 15578960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 33679328 - 33679234
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||    
T  33679328 gcttccgcagttattcaatcggtttaagagattaaaatgttataacttacgaaagggttttgagttaagagattgatcaaaaccacttagttaat 33679234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 9313927 - 9313830
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||| |||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||    
T  9313927 atcgcttccgcagttattcaatcggtttaagatattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaat 9313830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 14790745 - 14790857
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  14790745 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggt 14790843  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  14790844 acacttgccaaata 14790857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 2331261 - 2331355
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||| |||||||||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| || |||||||||    
T  2331261 gcttccgcagttattcaatcgatttaagagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaagtacttagttaat 2331355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 22920497 - 22920587
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaa 103  Q
    ||||| |||||||||| || |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  22920497 gttcttttatcgcttctgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaa 22920587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 7560314 - 7560232
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    |||||||| |||||||||||||||||| ||||||||| |||||| |||| ||||| |||||||||||||||||||||||||||    
T  7560314 gcttccgcagttattcaatcggtttaagagattaaaaggttatagcttaggaaagagttttgagtcaagagattgatcaaaac 7560232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 11296277 - 11296195
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||| || |||||||||||||| |||||||||||||||||||    
T  11296277 gcttccgcggttattcaatcggttttagagattaaaatgttataatttgagaaagggttttgaatcaagagattgatcaaaac 11296195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 14795773 - 14795885
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| |||||| | ||||||||||||||||| |||||||| |||||||    
T  14795773 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtcctcgtaggtacgaactttattactacttcgatagcttttggt 14795871  T
Q  385 acacttgccaaata 398  Q
    ||||||||||||||    
T  14795872 acacttgccaaata 14795885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 2330609 - 2330703
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||||||| |||| |||||| |||||||||||| ||||||| || |||||||||    
T  2330609 gctttcgcagttattcaatcggtttaatagattaaaaggttataacttatgaaatggttttcagtcaagagattaatcaaaagtacttagttaat 2330703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 7560216 - 7560144
Alignment:
Q  46 tttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  7560216 tttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactaattagttaat 7560144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 17696569 - 17696664
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaa-agttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||| | || | ||||||| | ||||||||||||  |||||||||||||||||||||||||||||| | | |||||||||    
T  17696569 gcttccgcggttattcaatctgatttagagattaatagagttataacttagtaaagggttttgagtcaagagattgatcaaagccacttagttaat 17696664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 20189560 - 20189483
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||| | ||||||||||| ||||||||||| |||||    
T  20189560 gttattcaatcggtttaagagattaaaaggttataacctaggaaagtgatttgagtcaagtgattgatcaaagctatt 20189483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 22146431 - 22146508
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||| | ||||||||||| ||||||||||| |||||    
T  22146431 gttattcaatcggtttaagagattaaaaggttataacctaggaaagtgatttgagtcaagtgattgatcaaagctatt 22146508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 13095816 - 13095764
Alignment:
Q  66 taacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  13095816 taacttaggaaagggttttgagttaagagattgatcaaaactatttagttaat 13095764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 16731362 - 16731433
Alignment:
Q  33 gttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaa 104  Q
    ||||||||||||| |||| ||||||||| |||||||| || ||||||  |||||||||||||||||||||||    
T  16731362 gttattcaatcggcttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaa 16731433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 2331588 - 2331628
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  2331588 tttattactacttcgatagtttttggtacacttgccaaata 2331628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 15578807 - 15578763
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacg 313  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  15578807 ctgcctagggcaacccataaatttaatacatcctttattttaacg 15578763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 22221905 - 22221959
Alignment:
Q  342 cctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  22221905 cctcgtggaaacgaa-tttattactacttcgatagcttttggtacacttgccaaat 22221959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 22247740 - 22247794
Alignment:
Q  342 cctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  22247740 cctcgtggaaacgaa-tttattactacttcgatagcttttggtacacttgccaaat 22247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 23842619 - 23842565
Alignment:
Q  342 cctcgtggatacgaactt-tattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||||||||||| | ||| || |||||||||||||||||||||||||||    
T  23842619 cctcgtggatacgaacttattttattatttcgatagtttttggtacacttgccaa 23842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 14969636 - 14969673
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaa 50  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  14969636 gttcttttatcgcttccgcggttattcaatcggtttaa 14969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 19664782 - 19664674
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtaca 387  Q
    |||||| |||||||||| |  ||| ||| ||| | ||||||||| |||||||| |||||||||||| || ||  ||| || |||||||| ||||||| ||    
T  19664782 aatttaatacatcctttttgataaagaaattgttgagtagaaataaacaacggtcctcgtggatacaaatttatttattacttcgatag-ttttggttca 19664684  T
Q  388 cttgccaaat 397  Q
    ||||||||||    
T  19664683 cttgccaaat 19664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 26390970 - 26391011
Alignment:
Q  77 agggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  26390970 agggttttgaatcaagagattgatcaaaactattttgttaat 26391011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 1838602 - 1838712
Alignment:
Q  285 ataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggt 384  Q
    ||||||||| |||||||||| |  ||| ||| ||||  |||||||||||||||||| ||| ||||||||||| ||  ||| || |||||||  |||||||    
T  1838602 ataaattta-tacatcctttttgataaagaaattgccgagtagaaattaacaacggtccttgtggatacgaatttatttattacttcgata-attttggt 1838699  T
Q  385 acacttgccaaat 397  Q
     ||||||||||||    
T  1838700 tcacttgccaaat 1838712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 6856612 - 6856656
Alignment:
Q  74 gaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||    
T  6856612 gaaagggttttgaatcaagagattgatcaaaattattaagttaat 6856656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 15535184 - 15535252
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaa 356  Q
    |||||| |||||||||| || ||| ||| | ||| ||||||| |||||||||| |||||||||||||||    
T  15535184 aatttaatacatccttttttataaagaaatggctgagtagaagttaacaacggtcctcgtggatacgaa 15535252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 22920835 - 22920875
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  22920835 tttattactacttcgatagttattggtacacttgccaaata 22920875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 23848075 - 23848129
Alignment:
Q  342 cctcgtggatacgaactt-tattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||||||||||| | ||| ||  ||||||||||||||||||||||||||    
T  23848075 cctcgtggatacgaacttattttattatgtcgatagtttttggtacacttgccaa 23848129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 17232161 - 17232201
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  17232161 tttattactacttcgatagttattggtacacttgtcaaata 17232201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 27649259 - 27649338
Alignment:
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||| ||||| |||||||||||| |||||||||| ||| |||  ||| || |||||||| |||| || ||||||||||||    
T  27649259 ttgctgagtaggaattaacaacggtcctcgtggattcgatcttatttattacttcgatag-ttttagttcacttgccaaat 27649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 28974469 - 28974433
Alignment:
Q  74 gaaagggttttgagtcaagagattgatcaaaactatt 110  Q
    ||||||||||||| || ||||||||||||||||||||    
T  28974469 gaaagggttttgactctagagattgatcaaaactatt 28974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 38316186 - 38315808
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||||| |||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||| |||||||||||||| || | ||||||||| || |    
T  38316186 gcttccgcagttattcaatcggtttaagatattaaaaggttataacttaggaaagggttttgagtgaagagattgatcaataccacttagttaatttgtc 38316087  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || || || ||   | || ||| ||||||   |||||||| |||| | || ||||||||||||| ||||||||||| |||||||||| |  || |     
T  38316086 gtaaagctaagttaatttctttgagagagaagagaggcaaattactcactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatta 38315987  T
Q  220 ccaaaccaatttaattgcatctcatttacattttatgca-ccaaattcagctgcctagagcaacccat--aaatttactacatcctttattttaacgaac 316  Q
     ||||||| |||| || | |   ||| |  ||||||||| |||||| || ||||||||  ||||||    ||||||||||||||||| ||||||||||||    
T  38315986 tcaaaccattttatttactttgtattaag-ttttatgcaaccaaatccaactgcctaggacaaccccgtaaaatttactacatccttaattttaacgaac 38315888  T
Q  317 ttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||| |||||||    
T  38315887 ttgctaagtagaa-ttaacaacggtcctcgtggatacgaactttattactacttcgatag-ttttgatacacttaccaaata 38315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 258 - 391
Target Start/End: Original strand, 29435965 - 29436099
Alignment:
Q  258 accaaattcagctgcctagagcaacccataaa-tttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaa 356  Q
    ||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29435965 accaaatccaactgcctagtgcaacccataaaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacgaa 29436064  T
Q  357 ctttattactaattcgatagtttttggtacacttg 391  Q
    |||||||| || |||||||||||||| ||||||||    
T  29436065 ctttattattacttcgatagtttttgatacacttg 29436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 256 - 387
Target Start/End: Complemental strand, 13572192 - 13572059
Alignment:
Q  256 gcaccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtag--aaattaacaacggccctcgtggatac 353  Q
    ||||| ||| || |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||| |||||    
T  13572192 gcacctaatccaactgcctagtgcaacccataaattcactacatcctttattttaacgaatttgctaagtagaaaaattaacaacggtcctcgtagatac 13572093  T
Q  354 gaactttattactaattcgatagtttttggtaca 387  Q
    |||||||||||||| |||||||| ||||||||||    
T  13572092 gaactttattactacttcgatagcttttggtaca 13572059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 11056310 - 11056415
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  11056310 gttcttttatcgcttccgcggttattcaatcgatttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactactta 11056409  T
Q  113 gttaat 118  Q
    ||||||    
T  11056410 gttaat 11056415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 29435727 - 29435824
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  29435727 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 29435824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 1503575 - 1503478
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  1503575 atcgcttccgcggttattcaatcggtttaagagattaaaaggttttaacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 1503478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 1506779 - 1506682
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  1506779 atcgcttccgcggttattcaatcggtttaagagattaaaatgttttaacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 1506682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 4577801 - 4577898
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  4577801 atcgcttccgcggttattcaatcggtttaagagattataaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 4577898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 11059768 - 11059873
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  11059768 gttcttttatcgcttccgcggttattcaatcgctttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaatctactta 11059867  T
Q  113 gttaat 118  Q
    ||||||    
T  11059868 gttaat 11059873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 30719751 - 30719849
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaata 119  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| | ||||||||    
T  30719751 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaata 30719849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 15704123 - 15704015
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    |||||||||  ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||     
T  15704123 aatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttcgagtcaagagattgatcaaaactac 15704024  T
Q  110 ttagttaat 118  Q
    |||||||||    
T  15704023 ttagttaat 15704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 15719416 - 15719319
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||| ||||||||||||||| || ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  15719416 atcgcttccgcagttattcaatcggttgaagagattaaaaggttataacttaggaaagggtttcgagtcaagagattgatcaaaactacttagttaat 15719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 18938868 - 18938955
Alignment:
Q  19 ttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  18938868 ttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagagattgatcaaaac 18938955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 40677911 - 40677817
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  40677911 gcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaat 40677817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 13518273 - 13518377
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactattta 112  Q
    ||||| |||||||||||||||| |||||||||| |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||| |||    
T  13518273 gttcttttatcgcttccgcggt-attcaatcggcttaagagattaaaaggttataacttaggaaaggggtttgagtcaagagattgatcaaatctactta 13518371  T
Q  113 gttaat 118  Q
    ||||||    
T  13518372 gttaat 13518377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 22592482 - 22592575
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  22592482 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttatgacttaggaaagggttttgactcaagagattgatcaaaac 22592575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 40139140 - 40139314
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaat 162  Q
    ||||||||||  |||| ||||||| |||||||||||||||||||||||  |||||| || | || |  ||| |||||||| ||  ||||||  | |||||    
T  40139140 ttataacttagaaaagagttttgactcaagagattgatcaaaactattgtgttaatctgtcgtaaaactagatgaacattgagcaagaagaggaacaaat 40139239  T
Q  163 tattcacggcgaacaatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaattgc 237  Q
    ||||||| | || ||||||||||||| |||||||||| || ||||||| ||||| || |||||||| ||||||||    
T  40139240 tattcacagtgagcaatagaggattcgaaggcttgatcatttgttttaatataattttcaaaccaacttaattgc 40139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 38326413 - 38326319
Alignment:
Q  21 atcgcttccgcggttattcaatcggttta------aaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    |||||||||||||||||||||||||||||      | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38326413 atcgcttccgcggttattcaatcggtttaggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactat 38326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 18011940 - 18012016
Alignment:
Q  41 atcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  18011940 atcggtttaagagattaaaaggttataacttaggaaagggttt-gagtcaagagattgatcaaaactacttagttaat 18012016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 23673461 - 23673353
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtaca 387  Q
    |||||| |||||||||| |  ||| ||| ||| | |||||||||||||||||| ||||||||||||||| ||  ||| || |||||||| ||||||| ||    
T  23673461 aatttaatacatcctttttgataaagaaattgttgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag-ttttggttca 23673363  T
Q  388 cttgccaaat 397  Q
    ||||||||||    
T  23673362 cttgccaaat 23673353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 397
Target Start/End: Original strand, 16295048 - 16295135
Alignment:
Q  309 taacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaat 397  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||  || |||  ||| || |||||||| ||||||| ||||||||||||    
T  16295048 taacgaaattgctgagtagaaattaacaacggtcctcgtggatttgatcttatttattacttcgatag-ttttggttcacttgccaaat 16295135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 32074293 - 32074209
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatac 353  Q
    |||||||| |||||||| || |||| |||||||||||  |||| ||| || |||||||||||||||||||  || ||||||||||    
T  32074293 ctgcctagggcaacccacaattttaatacatcctttacattaatgaaatttctaagtagaaattaacaacaaccatcgtggatac 32074209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 398
Target Start/End: Original strand, 36327090 - 36327164
Alignment:
Q  323 agtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    ||||||| |||||||||| ||||||||||||||| ||  ||| || |||||||| ||||||| |||||||||||||    
T  36327090 agtagaagttaacaacggtcctcgtggatacgaatttatttattacttcgatag-ttttggttcacttgccaaata 36327164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 398
Target Start/End: Complemental strand, 32575801 - 32575692
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtaca 387  Q
    |||||| |||||| |||||| ||||||| | | | ||||||| |||||||||| ||||||||||||||| ||  ||| || ||| |||| | ||||| ||    
T  32575801 aatttaatacatcatttattataacgaaatcgttgagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcaatag-tgttggttca 32575703  T
Q  388 cttgccaaata 398  Q
    |||||||||||    
T  32575702 cttgccaaata 32575692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 25925209 - 25925175
Alignment:
Q  84 tgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||| ||||||    
T  25925209 tgagtcaagagattgatcaaaactattttgttaat 25925175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 18939200 - 18939237
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  18939200 tttattactacttcgatagttattggtacacttgccaa 18939237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 24385023 - 24384932
Alignment:
Q  308 ttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttatt--actaattcgatagtttttggtacacttgccaaata 398  Q
    |||| ||| |||||||||||||||||| ||| | | ||||| ||||||| || |||  | || |||||||||||| |||||||||||||||||    
T  24385023 ttaaagaaattgctaagtagaaattaataacagtcatcgtgaatacgaatttaattttattacttcgatagtttt-ggtacacttgccaaata 24384932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 40779029 - 40778988
Alignment:
Q  77 agggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  40779029 agggttttgagtcaagagattgatcagatctattttgttaat 40778988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 22592819 - 22592859
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  22592819 tttattactacttcgatagttattggtacacttaccaaata 22592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 4238 - 4616
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||  | |    
T  4238 gcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaaaagattgatcaaaaccacttagttaatccgtc 4337  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
    ||| || ||||| ||   | || ||| |||||||  |||||||| | || | || ||||||||||||| ||||||||||| |||||||||| |  || |     
T  4338 ataaagctaggttaatttctttgagagagaagacaggcaaattacttacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaatta 4437  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta-tgc-accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     |||||| |||| |||  || | |||||| ||||| ||| ||||||| ||  | ||||| |||||||||||||||| |||||||||||||||||||   |    
T  4438 tcaaacc-attttattttatgttatttactttttattgcaaccaaatccaatttcctagggcaacccataaatttaatacatcctttattttaacgcttt 4536  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    | |  |||||||||| | |  | |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  4537 ttccgagtagaaattgatacagtccct-gtggatacaaactttattactacttcgatagttttttgtacacttgccaaata 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 269 - 398
Target Start/End: Complemental strand, 33865 - 33737
Alignment:
Q  269 ctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaa 368  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||     
T  33865 ctgcctagggcaacccataaatttagtacatcctttattttaacgaacttgctaagtagaaattaacaacggtcctcgtggatacaaactttattactac 33766  T
Q  369 ttcgatagtttttggtacacttgccaaata 398  Q
    |||||||| |||||||||||||||||||||    
T  33765 ttcgatag-ttttggtacacttgccaaata 33737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 96; Significance: 6e-47; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 13571 - 13949
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgcc 123  Q
    |||||| |||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||| |||||||||||||| | |||||||||  | |    
T  13571 gcttccacggttattcaatcggtttaagagattaaaagggtataacttaggaaagggttttgagtcaatagattgatcaaaaccacttagttaatccgtc 13670  T
Q  124 atagagttaggtgaa---cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaatt 219  Q
     || || ||||| ||   | || ||| ||||||   |||||||| |||  | || |||||||||||||  |||||||||| |||||||||| |  || |     
T  13671 gtaaagctaggttaatttctttgagagagaagagaggcaaattactcatagtgagcaatagaggattcggaaggcttgatcatctgttttaatccaatta 13770  T
Q  220 ccaaaccaatttaattgcatctcatttacatttta--tgcaccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaact 317  Q
     ||||||| |||| || | | | |||||| |||||  |  ||||||| || |||||||| ||||||||| |||||| |||||||||||||||||||   |    
T  13771 tcaaaccattttattttc-tgttatttactttttattttaaccaaatccaactgcctagggcaacccatcaatttaatacatcctttattttaacgcttt 13869  T
Q  318 tgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||  |||||||||| | ||| | ||  |||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  13870 tgccgagtagaaattga-aacagtccctgtggatacgaactttattactacttcgatagcttttggtacacttgccaaata 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 398
Target Start/End: Original strand, 11467 - 11606
Alignment:
Q  258 accaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaac 357  Q
    ||||||| || |||||||| | |||||||||||||| |||||||||||||||||||   ||||  |||| ||||| | |  | |||| ||||||||||||    
T  11467 accaaatccaactgcctagggaaacccataaatttaatacatcctttattttaacgcttttgccgagtataaattgaaacagtccct-gtggatacgaac 11565  T
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  11566 tttattactgcttcgatagcttttggtacacttgccaaata 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 5631 - 5670
Alignment:
Q  79 ggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  5631 ggttttgagtcaagagattgatcaaaaccacttagttaat 5670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 2430 - 2527
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  2430 atcgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaat 2527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 6262 - 6359
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||| ||||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||    
T  6262 atcgcttccgcgattatttaatcggtttaagagattaaaaggttataacttaggaaaggattttgagtcaagagattgatcaaaactacttaattaat 6359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 53035 - 52927
Alignment:
Q  10 aatgttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactat 109  Q
    |||||||||  ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||     
T  53035 aatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttcgagtcaagagattgatcaaaactac 52936  T
Q  110 ttagttaat 118  Q
    |||||||||    
T  52935 ttagttaat 52927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 67973 - 67876
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||| ||||||||||||||| || ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  67973 atcgcttccgcagttattcaatcggttgaagagattaaaaggttataacttaggaaagggtttcgagtcaagagattgatcaaaactacttagttaat 67876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 92423 - 92601
Alignment:
Q  35 tattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaatatgccatagagttagg 134  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||  | | || || ||||    
T  92423 tattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctagg 92522  T
Q  135 tgaa--cattaagatagaagactagcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgtttta 210  Q
    | ||    || ||| ||||||   |||||||| |||| | |||||||||||||||| ||||||||||| ||||||||||    
T  92523 ttaatttcttgagagagaagagaggcaaattactcacagtgaacaatagaggattcgaaaggcttgatcatctgtttta 92601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 7214 - 7296
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaa 103  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  7214 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaaaggttttgagtcaagagattgatcaa 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 13583 - 13679
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||  |||||| |||||||||    
T  13583 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgat-gaaactaattagttaat 13679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 27599 - 27695
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||  |||||| |||||||||    
T  27599 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgat-gaaactaattagttaat 27695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 20035 - 20129
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| |||||||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||||    
T  20035 gcttctgcggttattcaatcggtttaagcgattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactaatttgttaat 20129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 29301 - 29395
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| |||||||||||||||||||  | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  29301 gcttccacggttattcaatcggtttaggaaattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 29395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 53098 - 53192
Alignment:
Q  24 gcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||||| | |||||||||||||||| | |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  53098 gcttccacagttattcaatcggtttgagagatgaaaaggttataacttaagaaggggttttgagtcaagagattgatcaaaaccacttagttaat 53192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 398
Target Start/End: Original strand, 42716 - 42958
Alignment:
Q  157 gcaaattattcacggcgaacaatagaggattc-aaaggcttgattatctgttttattataaattccaaaccaatttaattgcatctcatttacattttat 255  Q
    |||||||| |||| | || ||||||||||||| ||||||||||| |||||||||| |  || |  ||||||| |||| || | | | |||||| ||||||    
T  42716 gcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccattttattttc-tgttatttactttttat 42814  T
Q  256 -gca-ccaaattcagctgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatac 353  Q
     ||| |||||| ||  ||||||| | || ||||||||||| |||||||||||||||||||   ||||  ||||||| || | |  | |||| ||| ||||    
T  42815 tgcaaccaaatccaaatgcctagggaaatccataaatttaatacatcctttattttaacgtttttgccgagtagaagttgaaacagtccct-gtgaatac 42913  T
Q  354 gaactttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||||| | |||||||| |||||||||||||| ||||||    
T  42914 gaactttattacgacttcgatagcttttggtacacttgacaaata 42958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 27029 - 26935
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaa-gttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  27029 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaaggttatgacttaggaaagggttttgactcaagagattgatcaaaac 26935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 26690 - 26650
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  26690 tttattactacttcgatagttattggtacacttgccaaata 26650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 1378 - 1463
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  1378 atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgattcaagatattgatcaaaac 1463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 90432 - 90306
Alignment:
Q  270 tgcctagagcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaat 369  Q
    ||||||| |||||||||||||||| |||||||||||||||||||   ||||  |||||||||| | ||| | ||  ||||||||||||||||||| || |    
T  90432 tgcctagggcaacccataaatttaatacatcctttattttaacgcttttgccgagtagaaattga-aacagtccatgtggatacgaactttattagtact 90334  T
Q  370 tcgatagtttttggtacacttgccaaat 397  Q
    ||||||| ||||||||||||||||||||    
T  90333 tcgatagcttttggtacacttgccaaat 90306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 28801 - 28704
Alignment:
Q  21 atcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||||||||||||||||||||| |||||| | ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||| || || ||||||    
T  28801 atcgcttccgcggttattcaatctgtttaagacattaaaaggttataacttaggaaagggttttgattcaagagatttatcaaaattaatttgttaat 28704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 28471 - 28431
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaata 398  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  28471 tttattactacttcgatagttattggtacacttgccaaata 28431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 27330 - 27423
Alignment:
Q  13 gttctgttatcgcttccgcggttattcaatcggtttaaaagattaaaaagttataacttaagaaagggttttgagtcaagagattgatcaaaac 106  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||| || |||| |||||||| |||||||||||| ||||||    
T  27330 gttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaaggttttgattcaagagattgaacaaaac 27423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 27668 - 27705
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaa 395  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  27668 tttattactacttcgatagttattggtacacttgccaa 27705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 228652 - 228707
Alignment:
Q  63 ttataacttaagaaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  228652 ttattacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaat 228707  T

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Target: scaffold0352 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 2734 - 2627
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattactaattcgatagtttttggtaca 387  Q
    |||||| |||||||||| |  ||||||| ||||| ||||||| |||||||||| |||||||||||||| |||  ||| || |||||||| ||||||| ||    
T  2734 aatttaatacatccttt-tgataacgaaattgctgagtagaagttaacaacggtcctcgtggatacgatcttatttattacttcgatag-ttttggtcca 2637  T
Q  388 cttgccaaat 397  Q
    ||||||||||    
T  2636 cttgccaaat 2627  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 468544 - 468418
Alignment:
Q  82 tttgagtcaagagattgatcaaaactatttagttaatatgccatagagttaggtgaacattaagatagaagactagcaaattattcacggcgaacaatag 181  Q
    ||||| |||||||||||||||||||||||  |||||| || | || |  ||||||||||||  || ||||||  |||||||||||||| | || ||||||    
T  468544 tttgattcaagagattgatcaaaactattgggttaatctgtcgtaaaactaggtgaacatt--gagagaagaggagcaaattattcacagtgagcaatag 468447  T
Q  182 aggattcaaaggcttgattatctgtttta 210  Q
    |  |||| |||||||||| || |||||||    
T  468446 acaattcgaaggcttgatcatatgtttta 468418  T

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Target: scaffold0766 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 3635 - 3713
Alignment:
Q  288 aatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaactttattact 366  Q
    |||||| |||||| ||||| ||||  || ||||| ||||||| |||||||||| |||||||||||| || |||||||||    
T  3635 aatttaatacatcatttatcttaattaaattgctgagtagaagttaacaacggtcctcgtggatacaaattttattact 3713  T

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Target: scaffold1431 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 518 - 475
Alignment:
Q  75 aaagggttttgagtcaagagattgatcaaaactatttagttaat 118  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||    
T  518 aaaggattttgactcaagagattgatcaaaactattttgttaat 475  T

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Target: scaffold0264 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 24232 - 24193
Alignment:
Q  358 tttattactaattcgatagtttttggtacacttgccaaat 397  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  24232 tttattactacttcgatagcttttggtacacttgccaaat 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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