View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5770_high_7 (Length: 268)

Name: NF5770_high_7
Description: NF5770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5770_high_7
NF5770_high_7
[»] chr3 (36 HSPs)
chr3 (29-261)||(19868675-19868919)
chr3 (29-261)||(4250078-4250322)
chr3 (29-157)||(9157797-9157925)
chr3 (29-157)||(42354593-42354721)
chr3 (28-162)||(30158212-30158346)
chr3 (29-157)||(9154624-9154752)
chr3 (29-157)||(10963216-10963344)
chr3 (29-157)||(10966725-10966853)
chr3 (29-157)||(18883022-18883150)
chr3 (29-157)||(44508617-44508745)
chr3 (29-162)||(2783925-2784058)
chr3 (29-157)||(27054679-27054807)
chr3 (29-152)||(10959714-10959837)
chr3 (29-152)||(29233768-29233890)
chr3 (29-157)||(28327252-28327380)
chr3 (29-157)||(28330577-28330705)
chr3 (29-152)||(5887164-5887286)
chr3 (29-152)||(2279800-2279923)
chr3 (29-152)||(5897148-5897270)
chr3 (29-152)||(16314770-16314892)
chr3 (29-152)||(16414936-16415058)
chr3 (29-152)||(18495764-18495886)
chr3 (29-152)||(18515910-18516032)
chr3 (29-152)||(23374910-23375032)
chr3 (134-261)||(25491896-25492014)
chr3 (29-157)||(3305658-3305786)
chr3 (29-157)||(6173533-6173661)
chr3 (29-123)||(54736312-54736406)
chr3 (29-121)||(4226033-4226125)
chr3 (29-157)||(20536759-20536886)
chr3 (29-157)||(18551477-18551605)
chr3 (29-71)||(25888650-25888692)
chr3 (166-261)||(3305542-3305635)
chr3 (166-261)||(28327136-28327229)
chr3 (166-261)||(28330461-28330554)
chr3 (155-189)||(20536898-20536932)
[»] chr5 (20 HSPs)
chr5 (29-261)||(1810590-1810834)
chr5 (29-261)||(33920834-33921078)
chr5 (29-157)||(17944459-17944587)
chr5 (29-162)||(4732013-4732146)
chr5 (29-157)||(19685978-19686106)
chr5 (29-157)||(34652937-34653065)
chr5 (29-157)||(2500190-2500318)
chr5 (29-157)||(19689361-19689489)
chr5 (29-152)||(26337796-26337919)
chr5 (29-162)||(26547897-26548030)
chr5 (29-162)||(26551456-26551589)
chr5 (29-162)||(28562541-28562674)
chr5 (29-162)||(28566109-28566242)
chr5 (29-157)||(33321106-33321234)
chr5 (33-162)||(40800102-40800231)
chr5 (30-261)||(9690455-9690698)
chr5 (29-152)||(26726760-26726882)
chr5 (57-157)||(3194967-3195067)
chr5 (29-152)||(25185200-25185323)
chr5 (112-156)||(2453142-2453186)
[»] scaffold0043 (1 HSPs)
scaffold0043 (29-261)||(13284-13528)
[»] chr8 (20 HSPs)
chr8 (26-162)||(27863733-27863869)
chr8 (29-162)||(14187805-14187938)
chr8 (29-162)||(5964060-5964193)
chr8 (29-157)||(9466936-9467064)
chr8 (29-152)||(20262369-20262492)
chr8 (29-152)||(21048999-21049122)
chr8 (29-162)||(22654066-22654199)
chr8 (29-157)||(30645282-30645410)
chr8 (29-152)||(31981162-31981285)
chr8 (35-157)||(39660145-39660267)
chr8 (29-152)||(13331902-13332025)
chr8 (29-156)||(31984799-31984926)
chr8 (29-261)||(5827719-5827963)
chr8 (29-152)||(17013214-17013337)
chr8 (29-152)||(17543864-17543987)
chr8 (29-152)||(24434846-24434968)
chr8 (29-152)||(24903666-24903789)
chr8 (29-152)||(24444892-24445014)
chr8 (169-257)||(14627143-14627229)
chr8 (93-152)||(18696171-18696231)
[»] chr4 (20 HSPs)
chr4 (29-157)||(11702769-11702897)
chr4 (29-257)||(56089496-56089736)
chr4 (29-157)||(10247629-10247757)
chr4 (29-162)||(18859582-18859715)
chr4 (29-157)||(13978942-13979070)
chr4 (29-157)||(15850981-15851109)
chr4 (29-152)||(3719678-3719801)
chr4 (29-149)||(3734131-3734250)
chr4 (29-152)||(14701719-14701842)
chr4 (29-152)||(49639998-49640120)
chr4 (29-157)||(26703673-26703801)
chr4 (29-149)||(49636705-49636824)
chr4 (29-156)||(10385760-10385881)
chr4 (54-157)||(33400539-33400642)
chr4 (67-157)||(19928712-19928802)
chr4 (75-162)||(17670221-17670308)
chr4 (26-157)||(23653089-23653223)
chr4 (166-261)||(13978826-13978919)
chr4 (166-261)||(19928596-19928689)
chr4 (29-187)||(11560578-11560750)
[»] chr2 (17 HSPs)
chr2 (29-156)||(1503615-1503742)
chr2 (29-156)||(1506819-1506946)
chr2 (29-161)||(18011755-18011887)
chr2 (29-162)||(13518108-13518241)
chr2 (29-157)||(30719583-30719711)
chr2 (29-157)||(38326453-38326581)
chr2 (29-162)||(11059603-11059736)
chr2 (29-157)||(4577661-4577788)
chr2 (29-157)||(38316229-38316357)
chr2 (29-157)||(40677954-40678082)
chr2 (29-152)||(15704152-15704275)
chr2 (29-152)||(18938709-18938831)
chr2 (29-152)||(22592328-22592451)
chr2 (29-152)||(29435564-29435687)
chr2 (61-157)||(38326178-38326274)
chr2 (93-152)||(15719470-15719529)
chr2 (166-261)||(40678105-40678198)
[»] scaffold0214 (3 HSPs)
scaffold0214 (32-157)||(19864-19989)
scaffold0214 (29-157)||(13415-13543)
scaffold0214 (29-157)||(27431-27559)
[»] chr7 (25 HSPs)
chr7 (29-162)||(20100447-20100580)
chr7 (29-162)||(22257061-22257194)
chr7 (29-157)||(22083625-22083752)
chr7 (29-162)||(22232809-22232942)
chr7 (29-162)||(22253797-22253930)
chr7 (29-157)||(3541350-3541478)
chr7 (29-160)||(748223-748354)
chr7 (29-152)||(26152964-26153087)
chr7 (29-162)||(8397648-8397781)
chr7 (29-162)||(5826890-5827023)
chr7 (29-157)||(6964095-6964223)
chr7 (29-157)||(38431201-38431329)
chr7 (29-157)||(44017974-44018102)
chr7 (29-152)||(23598945-23599067)
chr7 (29-152)||(26460280-26460402)
chr7 (29-152)||(710199-710322)
chr7 (29-152)||(2251685-2251807)
chr7 (29-152)||(12803447-12803569)
chr7 (29-152)||(26182116-26182238)
chr7 (29-157)||(43549001-43549129)
chr7 (29-152)||(11825537-11825660)
chr7 (74-162)||(2349276-2349364)
chr7 (65-155)||(23467349-23467440)
chr7 (166-261)||(44018125-44018218)
chr7 (213-261)||(17601384-17601432)
[»] chr6 (24 HSPs)
chr6 (29-162)||(14969471-14969604)
chr6 (26-157)||(34502151-34502282)
chr6 (29-261)||(12746498-12746742)
chr6 (29-157)||(31262579-31262707)
chr6 (29-152)||(13095880-13096003)
chr6 (29-157)||(9313967-9314095)
chr6 (29-152)||(35027315-35027438)
chr6 (29-157)||(5618491-5618618)
chr6 (29-153)||(28117652-28117776)
chr6 (29-157)||(28894663-28894791)
chr6 (29-157)||(2330438-2330566)
chr6 (29-152)||(11410578-11410701)
chr6 (29-152)||(17231669-17231792)
chr6 (29-152)||(22920343-22920465)
chr6 (33-157)||(33679375-33679498)
chr6 (29-157)||(2331090-2331218)
chr6 (29-157)||(17696397-17696526)
chr6 (29-121)||(15579097-15579189)
chr6 (29-90)||(5618396-5618457)
chr6 (100-162)||(3827069-3827131)
chr6 (30-82)||(11296321-11296373)
chr6 (54-157)||(31123238-31123341)
chr6 (166-261)||(35027466-35027559)
chr6 (62-96)||(3827018-3827052)
[»] scaffold0134 (1 HSPs)
scaffold0134 (29-157)||(7046-7174)
[»] scaffold0401 (1 HSPs)
scaffold0401 (30-156)||(4068-4194)
[»] chr1 (19 HSPs)
chr1 (29-162)||(37641671-37641804)
chr1 (29-152)||(28918188-28918311)
chr1 (29-157)||(3087907-3088035)
chr1 (29-152)||(17902969-17903092)
chr1 (29-152)||(24200426-24200548)
chr1 (29-157)||(18392201-18392329)
chr1 (29-157)||(33898134-33898262)
chr1 (29-157)||(34552866-34552994)
chr1 (29-152)||(16839115-16839237)
chr1 (29-152)||(16849045-16849167)
chr1 (29-152)||(20981173-20981296)
chr1 (29-157)||(23441466-23441594)
chr1 (29-152)||(49719667-49719791)
chr1 (33-152)||(20964270-20964389)
chr1 (29-152)||(49716184-49716309)
chr1 (29-157)||(6195626-6195754)
chr1 (29-117)||(50197142-50197230)
chr1 (166-257)||(23441617-23441706)
chr1 (166-261)||(33898018-33898111)
[»] scaffold0911 (2 HSPs)
scaffold0911 (29-157)||(4371-4499)
scaffold0911 (166-261)||(4257-4350)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-152)||(27061-27184)
[»] scaffold0083 (3 HSPs)
scaffold0083 (29-157)||(52927-53055)
scaffold0083 (29-156)||(29131-29258)
scaffold0083 (162-261)||(29014-29111)
[»] scaffold0067 (1 HSPs)
scaffold0067 (29-152)||(27176-27298)
[»] scaffold0062 (2 HSPs)
scaffold0062 (29-152)||(53064-53187)
scaffold0062 (93-152)||(68027-68086)
[»] scaffold0014 (1 HSPs)
scaffold0014 (29-156)||(227157-227284)
[»] scaffold1048 (1 HSPs)
scaffold1048 (29-152)||(1216-1338)
[»] scaffold0175 (1 HSPs)
scaffold0175 (29-152)||(28842-28965)
[»] scaffold0360 (2 HSPs)
scaffold0360 (29-116)||(2298-2385)
scaffold0360 (29-128)||(6123-6222)
[»] scaffold0637 (1 HSPs)
scaffold0637 (36-134)||(2022-2120)
[»] scaffold0273 (1 HSPs)
scaffold0273 (166-261)||(20018-20111)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 19868919 - 19868675
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19868919 tatctctaggttcctatgttgaattaaacataattactatttcaggattaaaagctagggttaatagtcattcaattcctaagatcaatttatgtaattg 19868820  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat---------------gaacacaaataatcttgaataaagactaggattccattgaattaaaaaaga 213  Q
     |||||| ||||||||||||||||||||||||||                ||||||||||||  ||||||||||||||||||||||||||||   || ||    
T  19868819 gaagaagctagggttaatagtcatgcaaagcaatcatatgaaaagcaacaaacacaaataattctgaataaagactaggattccattgaatt---aagga 19868723  T
Q  214 gagttcaaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19868722 gagtttaaacaaattacatggttcatagatcacaatagattcatctca 19868675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 4250322 - 4250078
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  4250322 tatctctaggttcctatgttgaattaaacagaattactatttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 4250223  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||||||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   ||||||    
T  4250222 aaagaagttagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaagactaggttttcattga--tgtcaaagag 4250125  T
Q  215 agttc-aaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||| |  |||||||||||||||||| ||||||||| ||||||||||||    
T  4250124 agtacttaacaaattacatggttcacagatcacaa-agattcatctca 4250078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 9157925 - 9157797
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  9157925 tatctctaggttcctatgttgaattaaatagaattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 9157826  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    |||||||||||||||| ||||||||||||    
T  9157825 caagaagttagggttactagtcatgcaaa 9157797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 42354593 - 42354721
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  42354593 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 42354692  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  42354693 caagaagctagggttaatagtcatgcaaa 42354721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 30158212 - 30158346
Alignment:
Q  28 atatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaatt 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||    
T  30158212 atatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatgtaatt 30158311  T
Q  128 gcaagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||| |||| |||||||||||||||| |||||||||    
T  30158312 gcacgaagctagggttaatagtcatacaaagcaat 30158346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 9154752 - 9154624
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  9154752 tatctctaggttcctatgttgaattaaatataattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 9154653  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    |||||||||||| ||| ||||||||||||    
T  9154652 caagaagttaggattactagtcatgcaaa 9154624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 10963344 - 10963216
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  10963344 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 10963245  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    || |||| |||||||||||||||| ||||    
T  10963244 cacgaagctagggttaatagtcatacaaa 10963216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 10966853 - 10966725
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  10966853 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 10966754  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    || |||| |||||||||||||||| ||||    
T  10966753 cacgaagctagggttaatagtcatacaaa 10966725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 18883150 - 18883022
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||| ||| |||||||||||||||||| ||||    
T  18883150 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaatccctaagatcaatttatgtgattg 18883051  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||||||||||||||||    
T  18883050 taagaagctagggttaatagtcatgcaaa 18883022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 44508745 - 44508617
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||| |||| ||||||||| |||||||||||||||| ||||    
T  44508745 tatctctaggttcctgtgttgaattaaacagaattactatttcaggattaaaagctcgggttagtagtcattcaattcttaagatcaatttatgtgattg 44508646  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  44508645 caagaagctagggttaatagtcatgcaaa 44508617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 2784058 - 2783925
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||| ||||| |||    
T  2784058 tatctctaggttcctatgttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttg 2783959  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  2783958 cacgaagctagggttaatagtcatacaaagcaat 2783925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 27054807 - 27054679
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||    
T  27054807 tatctctaggttcctatattgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattg 27054708  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  27054707 aaagaagttagggttagtagtcatacaaa 27054679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 10959837 - 10959714
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  10959837 tatctctaggttcctatgttgaatcaaacaggattactatttcagaattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 10959738  T
Q  129 caagaagttagggttaatagtcat 152  Q
    || |||| ||||||| ||||||||    
T  10959737 cacgaagctagggttgatagtcat 10959714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 29233768 - 29233890
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  29233768 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 29233866  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  29233867 caagaagctagggttaatagtcat 29233890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 28327380 - 28327252
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||||||| ||||    
T  28327380 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattg 28327281  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  28327280 aaagaagctagggttagtagtcatacaaa 28327252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 28330705 - 28330577
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||||||| ||||    
T  28330705 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattg 28330606  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  28330605 aaagaagctagggttagtagtcatacaaa 28330577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 5887164 - 5887286
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  5887164 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 5887262  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  5887263 caagaagctagggttaatagtcat 5887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 2279800 - 2279923
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||| |||| ||||||||||||| ||||||| ||||||||     
T  2279800 tatctctaggttcctatgttgaatcaaacaaaattactaattcaggattaaaagttagggttagtagtcattcaattcctaatatcaattcatgtaattt 2279899  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| || |||||||||||||    
T  2279900 caagaagctaaggttaatagtcat 2279923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 5897148 - 5897270
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  5897148 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 5897246  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||| ||||||||||||||||    
T  5897247 taagaagctagggttaatagtcat 5897270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 16314770 - 16314892
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| ||||||| || |||||     
T  16314770 tatctctaggttcctatgttgaatcgaacagaattactaattcaggattaaaatctagggttaatagtcattcaattcctaatatcaattcatataatt- 16314868  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  16314869 caagaagctagggttaatagtcat 16314892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 16414936 - 16415058
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||| ||| ||||||| || |||||     
T  16414936 tatctctaggttcctatgttgaatcaaacagaattactaattcaagattaaaagctagggttaatagtcatttaattcataatatcaattcatataatt- 16415034  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  16415035 caagaagctagggttaatagtcat 16415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 18495764 - 18495886
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| ||||||| || |||||     
T  18495764 tatctctaggttcctatgttgaatcgaacagaattactaattcaggattaaaatctagggttaatagtcattcaattcctaatatcaattcatataatt- 18495862  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  18495863 caagaagctagggttaatagtcat 18495886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 18515910 - 18516032
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||| ||| ||||||| || |||||     
T  18515910 tatctctaggttcctatgttgaatcaaacagaattactaattcaagattaaaagctagggttaatagtcatttaattcataatatcaattcatataatt- 18516008  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  18516009 caagaagctagggttaatagtcat 18516032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 23374910 - 23375032
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| ||| ||||||||||||| ||||||| || |||||     
T  23374910 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagatagggttaaaagtcattcaattcctaatatcaattcatataatt- 23375008  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  23375009 caagaagctagggttaatagtcat 23375032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 261
Target Start/End: Complemental strand, 25492014 - 25491896
Alignment:
Q  134 agttagggttaatagtcatgcaaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttcaaacaaattacatg 233  Q
    |||||||||||||||||||      ||||||||||||||||| ||||||||||||||||||||| |||||||||| |   ||||||||||||||||||||    
T  25492014 agttagggttaatagtcat------caatgaacacaaataattttgaataaagactaggattccgttgaattaaata---gagttcaaacaaattacatg 25491924  T
Q  234 gttcatagatcacaatagattcatctca 261  Q
    ||||||||||||||||||||||||||||    
T  25491923 gttcatagatcacaatagattcatctca 25491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 3305786 - 3305658
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||| |||||||| |||  |||||||||||| ||||    
T  3305786 tatctctaggttcctatgttgaattaaacagaattactatttcattattaaaagttagggttagtagtcattcaatttctattatcaatttatgtgattg 3305687  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  3305686 aaagaagctagggttagtagtcatacaaa 3305658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 6173533 - 6173661
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||||||| ||||||||| | || ||||||||||||| ||||||| ||||||||     
T  6173533 tatctctaggttcctatgttgaatcaaacatgattactaattcaggattaaaatctagggttagtggtcattcaattcctaatatcaattcatgtaattt 6173632  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||| ||||    
T  6173633 caagaagctagggttaatagtcatacaaa 6173661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 54736312 - 54736406
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgt 123  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||  ||||||||| ||||||||||||||||    
T  54736312 tatctctaggttcctatattgaattaaacagaattactatttcaggattaaaagctaggattagtagcgattcaattcttaagatcaatttatgt 54736406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 4226033 - 4226125
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttat 121  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||  | | |||||||| |||||||||||||||    
T  4226033 tatctctaggttcctatgttgaattaaacaaaattactatttcaggattaaaagctagggttagcaatcattcaatttctaagatcaatttat 4226125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 20536759 - 20536886
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||| ||| |||||  | | ||||||||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||||| || | ||||    
T  20536759 tatctctagtttcatatgtaaagttaaacagaattactatttcaggattaaaagatagggttaatagtcaattaattcctaagatcaattaatatgattg 20536858  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||||||||||| ||||    
T  20536859 -aagaagttagggttaatagtcatacaaa 20536886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 18551605 - 18551477
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||| ||| |||||  | ||||||||||| ||||||||| | |||| ||||||||||| |||| | | || |||||||||||||| ||  |||||    
T  18551605 tatctctagtttcatatgtaaagtcaaacagaatcactatttcaggtttaatagctagggttagtagtcaattaactcctaagatcaattaatacaattg 18551506  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||| ||| ||||    
T  18551505 aaagaagctagggttagtagccatacaaa 18551477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 25888650 - 25888692
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttc 71  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  25888650 tatctctaggttcctatgttgaatcaaacaggattactatttc 25888692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 3305635 - 3305542
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  3305635 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 3305542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 28327229 - 28327136
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  28327229 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 28327136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 28330554 - 28330461
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  28330554 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 28330461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 20536898 - 20536932
Alignment:
Q  155 aaagcaatgaacacaaataatcttgaataaagact 189  Q
    ||||||||||||||||||||| |||||||||||||    
T  20536898 aaagcaatgaacacaaataattttgaataaagact 20536932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 261
Target Start/End: Original strand, 1810590 - 1810834
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  1810590 tatctctaggttcctatgttgaattaaacagaattacaatttcaggattaaaagttagggttaatagtcattcaatttctaagatcaatttatgtaattg 1810689  T
Q  129 caagaagttagggttaatagtcatgc---------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaaga 213  Q
     |||||||||||||||||||||||||               ||| |||||||||||||||||  | |||||||||||||| |||||||||||   |||||    
T  1810690 taagaagttagggttaatagtcatgcaaaacaatcatatgaaaaacaatgaacacaaataattctcaataaagactaggaatccattgaatt---aaaga 1810786  T
Q  214 gagttcaaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    || |||||||||||| |||| ||||||||||| |||||||||||||||    
T  1810787 gacttcaaacaaatttcatgattcatagatcataatagattcatctca 1810834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 33921078 - 33920834
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  33921078 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 33920979  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||| ||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   ||||||    
T  33920978 aaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaagactaggttttcattga--tgtcaaagag 33920881  T
Q  215 agttc-aaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    |||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  33920880 agttcttaacaaattacatggttcacagatcacaa-agattcatctca 33920834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 17944587 - 17944459
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  17944587 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 17944488  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  17944487 caagaagctagggttaatagtcatgcaaa 17944459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 4732013 - 4732146
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||||    
T  4732013 tatctctaggttcctatgttgaatcaaacatgattactatttcatgattaaaagctagggttaatagtcatccaattcctaatatcaattcatgtaattg 4732112  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||||||||    
T  4732113 caagaagctagggttaatagtcatacaaagcaat 4732146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 19686106 - 19685978
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  19686106 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttattagtcattcaattcctaagatcaatttatgtgattg 19686007  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||||||||||||||||    
T  19686006 taagaagctagggttaatagtcatgcaaa 19685978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 34652937 - 34653065
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  34652937 tatctctaggttcctatgttgaattaaacaaaattattatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 34653036  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    |||||||||||||||||||||||||||||    
T  34653037 caagaagttagggttaatagtcatgcaaa 34653065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 2500190 - 2500318
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2500190 tatcactaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttaatagtcattcaattcctaagatcaatttatgtgattg 2500289  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  2500290 aaagaagttagggttagtagtcatacaaa 2500318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 19689489 - 19689361
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  19689489 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattg 19689390  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||||||||||||||||    
T  19689389 taagaagctagggttaatagtcatgcaaa 19689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 26337919 - 26337796
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  26337919 tatctctaggttcttatgttgaattaaacagaattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 26337820  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||  ||||||||||||||||    
T  26337819 aaagaaactagggttaatagtcat 26337796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 26548030 - 26547897
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  26548030 tatctctaggttcctatgttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattg 26547931  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||| ||||    
T  26547930 cacgaagctagggttaatagtcatacaaaacaat 26547897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 26551589 - 26551456
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  26551589 tatctctaggttcctatgttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattg 26551490  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||| ||||    
T  26551489 cacgaagctagggttaatagtcatacaaaacaat 26551456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 28562541 - 28562674
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||| ||||| |||    
T  28562541 tatctctaggttcctatgttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttg 28562640  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  28562641 cacgaagctagggttaatagtcatacaaagcaat 28562674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 28566109 - 28566242
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||| ||||| |||    
T  28566109 tatctctaggttcctatgttgaatcaaacaggattactatatcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtagttg 28566208  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  28566209 cacgaagctagggttaatagtcatacaaagcaat 28566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 33321106 - 33321234
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||| || |||| |||||||||||||||||||||||||| ||||    
T  33321106 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagttagggctagtagtcattcaattcctaagatcaatttatgtgattg 33321205  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  33321206 aaagaagttagggttagtagtcatacaaa 33321234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 40800102 - 40800231
Alignment:
Q  33 tctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaag 132  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||| ||||||||||| |    
T  40800102 tctaggttcctatgttgaatcaaacaggattactatttcaggattaaaaggtagtgttaatagtcattcaattcctaatatcaattcatgtaattgcacg 40800201  T
Q  133 aagttagggttaatagtcatgcaaagcaat 162  Q
    ||| |||||||||||||||| |||| ||||    
T  40800202 aagctagggttaatagtcatacaaaacaat 40800231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 261
Target Start/End: Complemental strand, 9690698 - 9690455
Alignment:
Q  30 atctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgc 129  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||||| ||||     
T  9690698 atctctaggttcctatgttgaattaaacataattactatttcaggattaaaaactagggttagtagtcgttcaattcctaagatcaatttatgtgattga 9690599  T
Q  130 aagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagaga 215  Q
    || ||| ||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   |||||||    
T  9690598 aataagctagggttaatagtcatgcaaacaatcgtacgaaaagcaatgaacacaaataattatgaataaagactaggttttcattga--tgtcaaagaga 9690501  T
Q  216 gttc-aaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||  ||||||||| |||||||| | ||||||| ||||||||||||    
T  9690500 gttcgtaacaaattatatggttcacaaatcacaa-agattcatctca 9690455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 26726882 - 26726760
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  26726882 tatctctaggttcctatgttgaatcaaacagatttactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 26726784  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| || |||||||||||||    
T  26726783 caagaagctatggttaatagtcat 26726760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 3195067 - 3194967
Alignment:
Q  57 cagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaa 156  Q
    |||||||| ||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3195067 cagaattattatttcaggattaaaagctaaggttagtagtcattcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaa 3194968  T
Q  157 a 157  Q
    |    
T  3194967 a 3194967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 25185323 - 25185200
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||| ||||| |||||||  || ||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  25185323 tatctctaggttcctatgatgaattaaacagagctagtattttaggattaaaagctagggttaatagtcattcaattcctaaaatcaatttatgtgattg 25185224  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| |||||||| |||||||    
T  25185223 caagaagctagggttattagtcat 25185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 2453186 - 2453142
Alignment:
Q  112 atcaatttatgtaattgcaagaagttagggttaatagtcatgcaa 156  Q
    ||||||||||||  |||||||||||||||||||||||||||||||    
T  2453186 atcaatttatgtggttgcaagaagttagggttaatagtcatgcaa 2453142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 13528 - 13284
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||    
T  13528 tatctctaggttcctatgttgaattaaatagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattg 13429  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||||||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   ||||||    
T  13428 aaagaagttagggttaatagtcatgcaaacaattatacaaaaagcaatgaacacaaataattctgaataaagactaggttttcattga--tgtcaaagag 13331  T
Q  215 agttc-aaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    |||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  13330 agttcttaacaaattacatggttcacagatcacaa-agattcatctca 13284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 27863733 - 27863869
Alignment:
Q  26 tcatatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaa 125  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  27863733 tcatatccctaggttcctatgttgaatcaaacagaattactatttcaggattaaaagttagggttaatagtcattcaattcctaagatcaattcatgtaa 27863832  T
Q  126 ttgcaagaagttagggttaatagtcatgcaaagcaat 162  Q
    |||||||||| |||||||||||||||| |||| ||||    
T  27863833 ttgcaagaagctagggttaatagtcatacaaaacaat 27863869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 14187938 - 14187805
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  14187938 tatctctaggttcctatgttgaatcaaacaggattactacttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 14187839  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||||||||||| |||||||| |||||||||    
T  14187838 caagaagttagggtttatagtcatacaaagcaat 14187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 5964193 - 5964060
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  5964193 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattg 5964094  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  5964093 cacgaagctagggttaatagtcatacaaagcaat 5964060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 9467064 - 9466936
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  9467064 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 9466965  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  9466964 aaagaagttagggttagtagtcatacaaa 9466936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 20262492 - 20262369
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||     
T  20262492 tatctctaggttcctatgttgaatcaaacaggattactatttctggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattt 20262393  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||||||||||||||||||||    
T  20262392 caagaagttagggttaatagtcat 20262369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 21049122 - 21048999
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||     
T  21049122 tatctctaggttcctatgttgaatcaaacaggattactatttctggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattt 21049023  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||||||||||||||||||||    
T  21049022 caagaagttagggttaatagtcat 21048999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 22654199 - 22654066
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||    
T  22654199 tatctctaggttcctatgttgaatcaaacaagattactatttcaggattaaaagttggggttaatagtcattcaattcctaatatcaattcatgtaattg 22654100  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||||||||    
T  22654099 caagaagctagggttaatagtcatacaaagcaat 22654066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 30645410 - 30645282
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||| |||||||||| |||||||||||||||||||  |||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  30645410 tatctctaggttcttatgttgaattaaacagaattactatttcaaaattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattg 30645311  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||||||||||||||||    
T  30645310 taagaagttagggttaatagtcatgcaaa 30645282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 31981285 - 31981162
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||    
T  31981285 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaatatcaatttatgtgattg 31981186  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||| || |||||||||||||    
T  31981185 taagaagctatggttaatagtcat 31981162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 39660145 - 39660267
Alignment:
Q  35 taggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaa 134  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||    
T  39660145 taggttcctatgttgaattaaacaaaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaa 39660244  T
Q  135 gttagggttaatagtcatgcaaa 157  Q
    |||||||||| ||||||| ||||    
T  39660245 gttagggttagtagtcatacaaa 39660267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 13332025 - 13331902
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  13332025 tatctctaggttcctatgatgaattaaacagaattactatttcagaattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 13331926  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||| |||||||| |||||||    
T  13331925 aaagaagctagggttagtagtcat 13331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 31984926 - 31984799
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| | ||| |||| |||||||||||||||||||||||||| ||||    
T  31984926 tatctctaggttcctatgttgaattaaacagaattattatttcaggattaaaagctatgattagtagtcattcaattcctaagatcaatttatgtgattg 31984827  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
     |||||| || |||||||||||||||||    
T  31984826 taagaagctatggttaatagtcatgcaa 31984799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 5827963 - 5827719
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||    
T  5827963 tatctcgaggttcctatgttgaattaaacagaattactctttcagaattaaaagctagggttagtagtcattcaattcctaagattaatttatgtgattg 5827864  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||| ||||||||||||||| ||              |||||||||||||||||||||  ||||||||||||||| || | ||||  |  |||||||    
T  5827863 aaagaagctagggttaatagtcaagcaaacaatcataagaaaagcaatgaacacaaataattctgaataaagactaggttttctttga--tgtaaaagag 5827766  T
Q  215 agttc-aaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    | |||  |||||| ||||||||||| ||||||||| ||||||||||||    
T  5827765 aattcttaacaaactacatggttcacagatcacaa-agattcatctca 5827719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 17013214 - 17013337
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||| || ||| |     
T  17013214 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatataaatt 17013313  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||| ||| ||||||||||||||||    
T  17013314 caataagctagggttaatagtcat 17013337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 17543987 - 17543864
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||| || ||| |     
T  17543987 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcataatatcaattcatataaatt 17543888  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||| ||| ||||||||||||||||    
T  17543887 caataagctagggttaatagtcat 17543864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 24434968 - 24434846
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  24434968 tatctctaggttcctatgttgaaccaaacagaattattaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 24434870  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  24434869 caagaagctagggttaatagtcat 24434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 24903666 - 24903789
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||| ||||||| || ||| |     
T  24903666 tatctctagcttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaattcatataaatt 24903765  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  24903766 caagaagctagggttaatagtcat 24903789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 24445014 - 24444892
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||| |||||||| ||||||||||||| ||||||| || |||||     
T  24445014 tatctctaggttcctatgttgaaccaaacagaattattaattcaggattaaaagctaggattaatagtcattcaattcctaatatcaattcatataatt- 24444916  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  24444915 caagaagctagggttaatagtcat 24444892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 14627229 - 14627143
Alignment:
Q  169 aaataatcttgaataaagactaggattccattgaattaaaaaagagagttcaaacaaattacatggttcatagatcacaatagattcat 257  Q
    |||||||  ||||||| ||||||| ||||| |||  ||  |||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  14627229 aaataattatgaataatgactaggtttccaatga--tatcaaagggagttcaaacaaattacatggttcacagattacaatagattcat 14627143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 18696171 - 18696231
Alignment:
Q  93 tagtaattcaattcctaagatcaatttatgtaattgcaa-gaagttagggttaatagtcat 152  Q
    |||| ||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  18696171 tagtcattcaattcctaatatcaattcatgtaatttcaaggaagttagggttaatagtcat 18696231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 11702769 - 11702897
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  11702769 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 11702868  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  11702869 caagaagctagggttaatagtcatgcaaa 11702897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 56089496 - 56089736
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||| ||||    
T  56089496 tatctctaggttcctatgttgaattaaacagaattactatttcaagattaaaagctagggttagtggtcattcaattcctaagatcaatttatgtgattg 56089595  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||| ||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   ||||||    
T  56089596 aaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaagactaggttttcattga--tgtcaaagag 56089693  T
Q  215 agttc-aaacaaattacatggttcatagatcacaatagattcat 257  Q
    |||||  ||||||||||||| |||| ||||||||| ||||||||    
T  56089694 agttcttaacaaattacatgattcacagatcacaa-agattcat 56089736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 10247757 - 10247629
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  10247757 tatctctaggttcctatgttgaattaaacagaattattatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattg 10247658  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||||||||||||||||    
T  10247657 taagaagttagggttaatagtcatgcaaa 10247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 18859715 - 18859582
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  18859715 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagtgttaatagtcattcaattcctaatatcaattcatgtaattg 18859616  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||| ||||    
T  18859615 cacgaagctagggttaatagtcatacaaatcaat 18859582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 13979070 - 13978942
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||| ||||    
T  13979070 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtggtcattcaattcctaagatcaatttatgtgattg 13978971  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  13978970 aaagaagctagggttagtagtcatacaaa 13978942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 15851109 - 15850981
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||    
T  15851109 tatcactaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagataaatttatgtgattg 15851010  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  15851009 aaagaagttagggttattagtcatacaaa 15850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 3719678 - 3719801
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || ||| |     
T  3719678 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataaatt 3719777  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  3719778 caagaagctagggttaatagtcat 3719801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 3734250 - 3734131
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  3734250 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 3734152  T
Q  129 caagaagttagggttaatagt 149  Q
    ||||||| |||||||||||||    
T  3734151 caagaagctagggttaatagt 3734131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 14701842 - 14701719
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||| ||||||| || ||| |     
T  14701842 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaattcatataaatt 14701743  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  14701742 caagaagctagggttaatagtcat 14701719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 49639998 - 49640120
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  49639998 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 49640096  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  49640097 caagaagctagggttaatagtcat 49640120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 26703673 - 26703801
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| | ||||    
T  26703673 tatctctaggttcctatgttgaattaaacataattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatatgattg 26703772  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| ||| |||| ||||||| ||||    
T  26703773 aaagaagctagagttagtagtcatacaaa 26703801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 49636705 - 49636824
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  49636705 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 49636803  T
Q  129 caagaagttagggttaatagt 149  Q
    ||||||| |||||||||||||    
T  49636804 caagaagctagggttaatagt 49636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 10385881 - 10385760
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| |||      |||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  10385881 tatctctaggttcctatgttgaattaaa------tactatatcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 10385788  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
    ||||||| ||||||||||||||||||||    
T  10385787 caagaagctagggttaatagtcatgcaa 10385760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 33400539 - 33400642
Alignment:
Q  54 aaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatg 153  Q
    ||||| |||||||||||||  |||||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  33400539 aaacaaaattactatttcagaattaaaagttagggttagtagtcattcaattactaagatcaatttatgtgattgcaagaagctagggttaatagtcaag 33400638  T
Q  154 caaa 157  Q
    ||||    
T  33400639 caaa 33400642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 19928802 - 19928712
Alignment:
Q  67 atttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaaa 157  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||    
T  19928802 atttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaa 19928712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 17670308 - 17670221
Alignment:
Q  75 attaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaaagcaat 162  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||| |||| ||||    
T  17670308 attaaaaggtagggttaatagtcattcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaaacaat 17670221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 23653223 - 23653089
Alignment:
Q  26 tcatatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagt-aatt--caattcctaagatcaatttatg 122  Q
    |||||||||||| ||| |||||  | | ||||||||||||||||||| |||||||||||||||||| |||| ||||   ||| ||| ||||||||| |      
T  23653223 tcatatctctagtttcatatgtaaagttaaacagaattactatttcaggattaaaagctagggttagtagtcaattaataatacctgagatcaattaaca 23653124  T
Q  123 taattgcaagaagttagggttaatagtcatgcaaa 157  Q
    | |||| ||||||||||| ||||||||||||||||    
T  23653123 tgattgaaagaagttaggtttaatagtcatgcaaa 23653089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 13978919 - 13978826
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  13978919 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 13978826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 19928689 - 19928596
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  19928689 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 19928596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 11560750 - 11560578
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||| ||| |||||  | | ||||| ||||||||||| | ||||||||| |||||||| |||| | | ||| |||||| |||||| |  | | |     
T  11560750 tatctctagtttcatatgtaaagttaaacataattactattttaggattaaaagatagggttactagtcaattaatacctaaggtcaattaacatgacta 11560651  T
Q  129 caagaagttagggttaatagtcatgcaaa--------------gcaatgaacacaaataatcttgaataaaga 187  Q
     ||||||||||||||||||||||||||||              |||||||||||||||||| |||||||||||    
T  11560650 aaagaagttagggttaatagtcatgcaaacaatcataataaaagcaatgaacacaaataattttgaataaaga 11560578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 1503615 - 1503742
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  1503615 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 1503714  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
    ||||||| ||||||||||||||||||||    
T  1503715 caagaagctagggttaatagtcatgcaa 1503742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 1506819 - 1506946
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  1506819 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 1506918  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
    ||||||| ||||||||||||||||||||    
T  1506919 caagaagctagggttaatagtcatgcaa 1506946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 18011887 - 18011755
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  18011887 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaattg 18011788  T
Q  129 caagaagttagggttaatagtcatgcaaagcaa 161  Q
    ||||||| |||||||||||||||| ||||||||    
T  18011787 caagaagctagggttaatagtcatacaaagcaa 18011755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 13518241 - 13518108
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  13518241 tatctctaggttcttatgttgaatcaaacaggattactatttcatgattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 13518142  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||| ||||    
T  13518141 cacgaagctagggttaatagtcatacaaatcaat 13518108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 30719711 - 30719583
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||| |||| |||| |||||||||||||||||||||||||| ||||    
T  30719711 tatctctaggttcctatgttgaattaaacagaattactattttaggattaaaagttagagttagtagtcattcaattcctaagatcaatttatgtgattg 30719612  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    |||||||||||||||||||||||||||||    
T  30719611 caagaagttagggttaatagtcatgcaaa 30719583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 38326453 - 38326581
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||| ||||    
T  38326453 tatctctaggttcctatgttgaattaaacagaattattatttcaggattaaaagctagggttggtagtcattcaattcctaagatcaatttatgtgattg 38326552  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  38326553 caagaagctagggttaatagtcatgcaaa 38326581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 11059736 - 11059603
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  11059736 tatctctaggttcttatgttgaatcaaacaggattactatttcatgattaaaagttagtgttaatagtcattcaattcctaatatcaattcatgtaattg 11059637  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  11059636 cacgaagctagggttaatagtcatacaaagcaat 11059603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 4577788 - 4577661
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  4577788 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagg-ttagtagtcattcaattcctaagatcaatttatgtgattg 4577690  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||||||||||||||||    
T  4577689 taagaagatagggttaatagtcatgcaaa 4577661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 38316229 - 38316357
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  38316229 tatctctaagttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 38316328  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| || ||||| ||||||| ||||    
T  38316329 aaagaagctacggttagtagtcatacaaa 38316357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 40677954 - 40678082
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||||||| ||||    
T  40677954 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattg 40678053  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  40678054 aaagaagctagggttagtagtcatacaaa 40678082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 15704152 - 15704275
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||| || ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||     
T  15704152 tatctctaggttcccatattgaatcaaacactattactatttcaagattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattt 15704251  T
Q  129 caagaagttagggttaatagtcat 152  Q
    || |||||||||||||||||||||    
T  15704252 caggaagttagggttaatagtcat 15704275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 18938831 - 18938709
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  18938831 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 18938733  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  18938732 caagaagctagggttaatagtcat 18938709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 22592451 - 22592328
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||| || ||| |     
T  22592451 tatctctaagttcctatgttgaatcaaacagaattactaattcatgattaaaagctagggttaatagtcattcaattcctaatctcaattcatataaatt 22592352  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  22592351 caagaagctagggttaatagtcat 22592328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 29435687 - 29435564
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||| ||||||||     
T  29435687 tatctctaggttcctatgttgaaacaaacaggattactatttcaggattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaattt 29435588  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  29435587 caagaagctagggttaatagtcat 29435564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 38326274 - 38326178
Alignment:
Q  61 attactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaaa 157  Q
    |||| ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  38326274 attattatttcaggattaaaagctagggttggtagtcattcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa 38326178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 15719470 - 15719529
Alignment:
Q  93 tagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcat 152  Q
    |||| |||||| |||||| ||||||| |||| ||| ||||||||||||||||||||||||    
T  15719470 tagtcattcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcat 15719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 40678105 - 40678198
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  40678105 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 40678198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 19989 - 19864
Alignment:
Q  32 ctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaa 131  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||    
T  19989 ctctaggttcctatgttgaattaaacataattactatttcatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattgtaa 19890  T
Q  132 gaagttagggttaatagtcatgcaaa 157  Q
    ||||||||||||||||||||||||||    
T  19889 gaagttagggttaatagtcatgcaaa 19864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 13543 - 13415
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| |||| |||||| | |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  13543 tatctctaggttcctatgttgaattaaacataattcctatttgaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 13444  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||||||||||||||||    
T  13443 taagaagttagggttaatagtcatgcaaa 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 27559 - 27431
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  27559 tatctctaggttcctatgttgaattaaacataatttttattttatgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 27460  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||||||||||||||||    
T  27459 taagaagttagggttaatagtcatgcaaa 27431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 20100580 - 20100447
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||    
T  20100580 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaatttctaatatcaattcatgtaattg 20100481  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||||||||    
T  20100480 caagaagctagggttaatagtcatacaaagcaat 20100447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 22257194 - 22257061
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  22257194 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattgaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 22257095  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||||||||    
T  22257094 caagaagctagggttaatagtcatacaaagcaat 22257061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 22083625 - 22083752
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||| |||| |||||||||||||||||||||||||| ||||    
T  22083625 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctaga-ttagtagtcattcaattcctaagatcaatttatgtgattg 22083723  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    |||||||||||||||||||||||||||||    
T  22083724 caagaagttagggttaatagtcatgcaaa 22083752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 22232809 - 22232942
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||||    
T  22232809 tatctctaggtttctatgttgaatcaaacagaattactatttcaggattgaaagctagggttaatagtcatttaattcctaatatcaattcatgtaattg 22232908  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||| ||||    
T  22232909 caagaagctagggttaatagtcatacaaaacaat 22232942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 22253930 - 22253797
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||||    
T  22253930 tatctctaggtttctatgttgaatcaaacagaattactatttcaggattgaaagctagggttaatagtcatttaattcctaatatcaattcatgtaattg 22253831  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||| |||||||||||||||| |||| ||||    
T  22253830 caagaagctagggttaatagtcatacaaaacaat 22253797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 3541350 - 3541478
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||    
T  3541350 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcatttaattcctaagatcaatttatgtgattg 3541449  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||||||||||| ||||    
T  3541450 aaagaagctagggttaatagtcattcaaa 3541478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 748223 - 748354
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  748223 tatctctaggtatctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 748322  T
Q  129 caagaagttagggttaatagtcatgcaaagca 160  Q
    ||||||| ||||||||| |||||| |||||||    
T  748323 caagaagctagggttaaaagtcatacaaagca 748354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 26153087 - 26152964
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  26153087 tatctctaagttcctatgttgaataaaacagaattactatttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 26152988  T
Q  129 caagaagttagggttaatagtcat 152  Q
     ||||||||||||||| |||||||    
T  26152987 aaagaagttagggttagtagtcat 26152964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 8397781 - 8397648
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  8397781 tatctctaggttcctatgttgaatcaaacatgattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 8397682  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| ||||||||||| |||| |||| ||||    
T  8397681 cacgaagctagggttaataatcatacaaaacaat 8397648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 5826890 - 5827023
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||| ||||||||| ||| ||||||| |||||||||    
T  5826890 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagttagggttaacagtcattcaattcataatatcaattcatgtaattg 5826989  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| || ||||||||||||| |||||||||    
T  5826990 cacgaagctatggttaatagtcatacaaagcaat 5827023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 6964223 - 6964095
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  6964223 tatctctaggttcctatgttgaattaaacaaaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattg 6964124  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  6964123 aaagaaggtagggttagtagtcatacaaa 6964095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 38431329 - 38431201
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||| |||||||| ||||||||||||||||| ||||    
T  38431329 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttggtagtcattcaatttctaagatcaatttatgtgattg 38431230  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  38431229 aaagaagctagggttagtagtcatacaaa 38431201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 44017974 - 44018102
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||||||| ||||    
T  44017974 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattg 44018073  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  44018074 aaagaagctagggttagtagtcatacaaa 44018102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 23598945 - 23599067
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  23598945 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 23599043  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| || |||||||||||||    
T  23599044 caagaagctatggttaatagtcat 23599067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 26460402 - 26460280
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  26460402 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 26460304  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  26460303 caagaagctagggttaatagtcat 26460280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 710199 - 710322
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| |||| ||||||||||||| ||||||| || ||| |     
T  710199 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaatctagggttagtagtcattcaattcctaatatcaattcatataaatt 710298  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  710299 caagaagctagggttaatagtcat 710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 2251807 - 2251685
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||| |||||||||||||| ||||||||||||| ||||||| || |||||     
T  2251807 tatctctaggttcctatgttgaatcaaacagaattagtaattcaggattaaaaactagggttaatagtcattcaattcctaatatcaattcatataatt- 2251709  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  2251708 caagaagctagggttaatagtcat 2251685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 12803447 - 12803569
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||| ||||    
T  12803447 tatctctaggttcctatgttgaattaaacaaaattactatttcaggattaaaagctaggg-tagtagtcattcaattcctaagatcaatttatgtgattg 12803545  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||| |||||||| |||||||    
T  12803546 aaagaagctagggttagtagtcat 12803569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 26182238 - 26182116
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||| || |||||     
T  26182238 tatctctaggttcctatgttgaatcaaacaaaattactaattcaggattaaaagctagggttaatagtcattcaattcttaatatcaattcatataatt- 26182140  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  26182139 caagaagctagggttaatagtcat 26182116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 43549129 - 43549001
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||| ||||    
T  43549129 tatctttagattcctatgttgaattaaacataattactatttcatgattaaaagctagggttagtagtcaatcaattcctaagttcaatttatgtgattg 43549030  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  43549029 aaagaagctagggttagtagtcatacaaa 43549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 11825537 - 11825660
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||| | ||| |   |||||||||    
T  11825537 tatctctaggtttctatgttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctgatatcgagacatgtaattg 11825636  T
Q  129 caagaagttagggttaatagtcat 152  Q
    || |||| ||||||||||||||||    
T  11825637 cacgaagctagggttaatagtcat 11825660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 2349364 - 2349276
Alignment:
Q  74 gattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||| |||||||||||||||| |||| ||||    
T  2349364 gattaaaagctagggttaatagtcattcaatttctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaacaat 2349276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 23467349 - 23467440
Alignment:
Q  65 ctatttcatgattaaaagctagggttaatagtaattcaatt-cctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgca 155  Q
    |||||||| |||||||||||||||||| |||| ||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23467349 ctatttcaggattaaaagctagggttagtagtcattaaatttcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgca 23467440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 44018125 - 44018218
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  |||||||||| |||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  44018125 cacaaataattctgaataaagattaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 44018218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 17601432 - 17601384
Alignment:
Q  213 agagttcaaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||||| |||||| ||||| | || |||||||||||||||||    
T  17601432 agagttcaaacaagttacattgttcacatattacaatagattcatctca 17601384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 14969604 - 14969471
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  14969604 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattg 14969505  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  14969504 cacgaagctagggttaatagtcatacaaagcaat 14969471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 34502282 - 34502151
Alignment:
Q  26 tcatatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaa 125  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |    
T  34502282 tcatatctctaggttcctatgttgaattaaacagaattactacttcaagattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtga 34502183  T
Q  126 ttgcaagaagttagggttaatagtcatgcaaa 157  Q
    ||| |||||| |||||||||||||||||||||    
T  34502182 ttgtaagaagctagggttaatagtcatgcaaa 34502151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 261
Target Start/End: Complemental strand, 12746742 - 12746498
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  12746742 tatctctaggttcatatgttgaattaaacagaattactatttcacgattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 12746643  T
Q  129 caagaagttagggttaatagtcatgc--------------aaagcaatgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagag 214  Q
     |||||| ||||||||||||||||||              |||||||||||||||||||||  ||||||||||||||| || ||||||  |   ||||||    
T  12746642 aaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaagactaggttttcattga--tgtcaaagag 12746545  T
Q  215 agtt-caaacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||   |||||||||||||||||| ||||||||| |||| |||||||    
T  12746544 agttattaacaaattacatggttcacagatcacaa-agatccatctca 12746498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 31262707 - 31262579
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  31262707 tatctctaggttcctatgttgaattaaacagaactactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 31262608  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||||||| ||||||| |||||||||    
T  31262607 caagaagttagagttaataatcatgcaaa 31262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 13095880 - 13096003
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| ||||||||     
T  13095880 tatctctaggttcctatgttgaatcaaacaggattactatttcatgattaaaagttagggttagtagtcattcaattcctaatatcaattcatgtaattt 13095979  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||||||||||||||||||||    
T  13095980 caagaagttagggttaatagtcat 13096003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 9313967 - 9314095
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||| |||||||||||||||||||||||||| ||||    
T  9313967 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaagagctatggttagtagtcattcaattcctaagatcaatttatgtgattg 9314066  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||| ||| |||||||||||||||||||||    
T  9314067 caataagctagggttaatagtcatgcaaa 9314095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 35027315 - 35027438
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  35027315 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 35027414  T
Q  129 caagaagttagggttaatagtcat 152  Q
     |||||| |||||||| |||||||    
T  35027415 aaagaagctagggttagtagtcat 35027438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 5618491 - 5618618
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||| ||||||||| ||| |||||||||||| ||||    
T  5618491 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagaagtcattcaattcttaa-atcaatttatgtgattg 5618589  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  5618590 caagaagctagggttaatagtcatgcaaa 5618618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 28117776 - 28117652
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||    
T  28117776 tatctctaggttcctatgttgaattaaacaaaattactatttcaggattaaaagctagggttagtagtcattcaattcctaaaatcaatttatgtgattg 28117677  T
Q  129 caagaagttagggttaatagtcatg 153  Q
    ||||||| ||||||||||| |||||    
T  28117676 caagaagctagggttaataatcatg 28117652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 28894663 - 28894791
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  28894663 tatctctaggtttctatgttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaattcctaagatcaatttatgtgattg 28894762  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  28894763 aaagaagttagggttagtagtcatacaaa 28894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 2330566 - 2330438
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  2330566 tatctctaggttcctatgttgaattaaatagaattactatttcaggattaaaagctagggttagtagtcattcaatttctaagatcaatttatgttattg 2330467  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||  ||| |||||||||||||||||    
T  2330466 aaagaatctagagttaatagtcatgcaaa 2330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 11410701 - 11410578
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||| ||||||||     
T  11410701 tatctctaggatcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaattt 11410602  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  11410601 caagaagctagggttaatagtcat 11410578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 17231792 - 17231669
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  |||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||     
T  17231792 tatctctaggttcctatgttgaatcaaacaggattacaatttcagaattaaaagatagggttaatagtcattcaattcctaatatcaattcatgtaattt 17231693  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  17231692 caagaagatagggttaatagtcat 17231669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 22920465 - 22920343
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  22920465 tatctctaggttcctatgttgaatcaaacagaattactaattcaggataaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 22920367  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  22920366 caagaagctagggttaatagtcat 22920343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 33679375 - 33679498
Alignment:
Q  33 tctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaag 132  Q
    |||||||||||| ||||||| || || ||||||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||| |||| |||    
T  33679375 tctaggttcctaggttgaattaa-cataattactatttcaggattaaaagctagggttagtagtcattcaattcctaagataaatttatgtgattgaaag 33679473  T
Q  133 aagttagggttaatagtcatgcaaa 157  Q
    |||||||||||||||||||||||||    
T  33679474 aagttagggttaatagtcatgcaaa 33679498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 2331218 - 2331090
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||| | |||| |||| |||||||||||||||||||||||||| ||||    
T  2331218 tatctctaggttcctacgttgaattaaacagaattgatatttcatgattaaaagctggtgttagtagtcattcaattcctaagatcaatttatgttattg 2331119  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||| | ||||||||||||||    
T  2331118 aaagaagctaggatcaatagtcatgcaaa 2331090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 17696526 - 17696397
Alignment:
Q  29 tatctctaggttccta-tgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaatt 127  Q
    |||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||| |||| || |||| |||||||| ||||||||||||||||| |||    
T  17696526 tatctctaggttcctagtgttgagttaaacagaattacaatttcaggattaagagccagggctagtagtcattcaatttctaagatcaatttatgtgatt 17696427  T
Q  128 gcaagaagttagggttaatagtcatgcaaa 157  Q
    ||||||||||||||||||||||||| ||||    
T  17696426 gcaagaagttagggttaatagtcatacaaa 17696397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 15579097 - 15579189
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttat 121  Q
    ||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||    
T  15579097 tatctctaggttcatatgttgaattaaatagatttactatttcatgattaaaatatagggttagtagtcattcaattcctaagatcaatttat 15579189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 5618396 - 5618457
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggtt 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5618396 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggtt 5618457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 3827069 - 3827131
Alignment:
Q  100 tcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatgcaaagcaat 162  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  3827069 tcaattcctaatatcaattcatgtaattgcaagaagttagggttaatagtcatacaaagcaat 3827131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 11296321 - 11296373
Alignment:
Q  30 atctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaag 82  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11296321 atctctaggttcctatgttgaattaaacagaattactatttcatgattaaaag 11296373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 31123341 - 31123238
Alignment:
Q  54 aaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcatg 153  Q
    ||||| ||||||||||||| |||||||||||||||  | |||| | | ||| ||||||||||||| |  | |||| |||||| |||||||||||||||||    
T  31123341 aaacacaattactatttcaggattaaaagctagggaaagtagtcaattaatacctaagatcaattaacatgattgaaagaagctagggttaatagtcatg 31123242  T
Q  154 caaa 157  Q
    ||||    
T  31123241 caaa 31123238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 35027466 - 35027559
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  35027466 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 35027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 3827018 - 3827052
Alignment:
Q  62 ttactatttcatgattaaaagctagggttaatagt 96  Q
    ||||||||||| |||||||||||||||||||||||    
T  3827018 ttactatttcaggattaaaagctagggttaatagt 3827052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 7174 - 7046
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  7174 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaatttctaagatcaatttatgtgattg 7075  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
    ||||||| |||||||||||||||||||||    
T  7074 caagaagctagggttaatagtcatgcaaa 7046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 4194 - 4068
Alignment:
Q  30 atctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgc 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||     
T  4194 atctctaggttcctatgttgaatgaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattga 4095  T
Q  130 aagaagttagggttaatagtcatgcaa 156  Q
    |||||| ||||||||||||||||||||    
T  4094 aagaagctagggttaatagtcatgcaa 4068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 37641804 - 37641671
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  37641804 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaattg 37641705  T
Q  129 caagaagttagggttaatagtcatgcaaagcaat 162  Q
    || |||| |||||||||||||||| |||||||||    
T  37641704 cacgaagctagggttaatagtcatacaaagcaat 37641671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 28918311 - 28918188
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||     
T  28918311 tatctctaggttcctatgttgaatcaaacagaattactatttcaggattaaaagctagggttaatagtcattcaattcctaatatcaatttatttaattt 28918212  T
Q  129 caagaagttagggttaatagtcat 152  Q
    || || | ||||||||||||||||    
T  28918211 catgatgctagggttaatagtcat 28918188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 3087907 - 3088035
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |  |||    
T  3087907 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagttattcaattcctaagatcaatttatatggttg 3088006  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||||||||||| ||||||| ||||    
T  3088007 aaagaagttagggttattagtcatacaaa 3088035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 17902969 - 17903092
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||     
T  17902969 tatctctagattcctatgttgaatcaaacaggattactatttcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatgtaattt 17903068  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  17903069 caagaagctagggttaatagtcat 17903092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 24200426 - 24200548
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  24200426 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 24200524  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  24200525 caagaagctagggttaatagtcat 24200548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 18392329 - 18392201
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||||||| ||||||||||||||||| ||||    
T  18392329 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagttagggttagtagtcattcaatttctaagatcaatttatgtgattg 18392230  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  18392229 aaagaagctagggttagtagtcatacaaa 18392201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 33898262 - 33898134
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||    
T  33898262 tatctctaggttcctatgttgaattaaacagaattactaattcaagattaaaagctagggttagtagtcattcaattcctaacatcaatttatgtgattg 33898163  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  33898162 aaagaagctagggttagtagtcatacaaa 33898134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 34552866 - 34552994
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  34552866 tatctctaggttcctatgttgaataaaacagaattactatttcaggattaaaagatagggttaatagtcattcaattactaagatcaatttatgtgattg 34552965  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||  |||||||| ||||||| ||||    
T  34552966 aaagaaactagggttagtagtcatacaaa 34552994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 16839115 - 16839237
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  16839115 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 16839213  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  16839214 caagaagctagggttaatagtcat 16839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 16849045 - 16849167
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||||| || |||||     
T  16849045 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaagagtcattcaattcctaatatcaattcatataatt- 16849143  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  16849144 caagaagctagggttaatagtcat 16849167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 20981296 - 20981173
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||| |||| ||||||||| ||| ||||||| ||||||||     
T  20981296 tatctctaggttcctatgttgaatcaaacaaaattattaattcaggattaaaagctagggttagtagtcattcaattcttaatatcaattcatgtaattt 20981197  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||||||||||||||||||||    
T  20981196 caagaagttagggttaatagtcat 20981173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 23441466 - 23441594
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||  |||||||||||| ||||    
T  23441466 tatctctaggttcctatgttgaattaaacagaattactatttcaggataaaaagctagggttagtagtcattcaattcctagcatcaatttatgtgattg 23441565  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  23441566 aaagaagctagggttagtagtcatacaaa 23441594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 49719791 - 49719667
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactattt-catgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaatt 127  Q
    ||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||| |||| | ||||||||||| ||||||| ||||||||    
T  49719791 tatctctaggttcctatgttgaatcaaacagtattacttttttcaagattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaatt 49719692  T
Q  128 gcaagaagttagggttaatagtcat 152  Q
     ||||||| ||||||||||||||||    
T  49719691 tcaagaagctagggttaatagtcat 49719667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 152
Target Start/End: Complemental strand, 20964389 - 20964270
Alignment:
Q  33 tctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaag 132  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| |||| ||||||||||||| ||||||  |||||||| ||||    
T  20964389 tctaggttcctatgttgaatcaaacaaaattactaattcaggattaaaagctagggttagtagtcattcaattcctaatatcaatacatgtaatttcaag 20964290  T
Q  133 aagttagggttaatagtcat 152  Q
    ||| || |||||||||||||    
T  20964289 aagctatggttaatagtcat 20964270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 49716309 - 49716184
Alignment:
Q  29 tatctctaggttcctat--gttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaat 126  Q
    |||||||||||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||| |||||||    
T  49716309 tatctctaggtttctatatgttgaatcaaacagtattactatttcaagattaaaagctagggttagtagtcaatcaattcctaatatcaattcatgtaat 49716210  T
Q  127 tgcaagaagttagggttaatagtcat 152  Q
    | ||||||| ||||||||||||||||    
T  49716209 ttcaagaagctagggttaatagtcat 49716184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 6195754 - 6195626
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||  |||| |||||||||||||||||||||||||| ||||    
T  6195754 tatctctaggttcctatgttgaattaaacataattactatttcaagattaaaagttatggttggtagtcattcaattcctaagatcaatttatgtgattg 6195655  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     ||||||  ||||||| ||||||| ||||    
T  6195654 aaagaagccagggttagtagtcatacaaa 6195626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 50197142 - 50197230
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaat 117  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||| |||| ||||||||||||||||||||    
T  50197142 tatctctaggttcctatgttgaattaaacagaataactatttcaagattaaaagctagagttagtagtcattcaattcctaagatcaat 50197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 23441617 - 23441706
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcat 257  Q
    ||||||||||  ||||||||||||||| || ||||||| | ||||||||  |||  |||||||||||||||||| ||||||||| ||||||||    
T  23441617 cacaaataattctgaataaagactaggttttcattgaagtcaaaaagag--ttcttaacaaattacatggttcacagatcacaa-agattcat 23441706  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 33898111 - 33898018
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  33898111 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 33898018  T

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Target: scaffold0911 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 4499 - 4371
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  4499 tatctctaggttcctatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 4400  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||||||| ||||||| ||||    
T  4399 aaagaagctagggttagtagtcatacaaa 4371  T

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Target: scaffold0911; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 4350 - 4257
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  4350 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 4257  T

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Target: scaffold0012 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 27061 - 27184
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || ||| |     
T  27061 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataaatt 27160  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||||||||||||||||||||    
T  27161 caagaagttagggttaatagtcat 27184  T

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Target: scaffold0083 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 53055 - 52927
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  53055 tatctctaggttcctatgttgaattaaacagaattattatttcaagattaaaagatagggttagtagtcattcaattcctaagatcaatttatgtgattg 52956  T
Q  129 caagaagttagggttaatagtcatgcaaa 157  Q
     |||||| |||| ||||||||||||||||    
T  52955 aaagaagctaggattaatagtcatgcaaa 52927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 29258 - 29131
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  29258 tatctctaggttcccaggttgaattaaacagaattactatttcaggaataaaagctagggttagtagtcattcaattcctaagatcaatttatgtgattg 29159  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
     |||||| |||| |||||||||||||||    
T  29158 aaagaagctaggtttaatagtcatgcaa 29131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 29111 - 29014
Alignment:
Q  162 tgaacacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctc 260  Q
    ||||||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  29111 tgaacacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctc 29015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 27298 - 27176
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||| ||||||| || |||||     
T  27298 tatctctaggttcctatgttgaatcaaacagaattactaattcaggattaaaagttagggttaatagtcattcaattcctaatatcaattcatataatt- 27200  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  27199 caagaagctagggttaatagtcat 27176  T

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Target: scaffold0062 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 53064 - 53187
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||| || ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||     
T  53064 tatctctaggttcccatattgaatcaaacactattactatttcaagattaaaagctagggttaatagtcattcaattcctaatatcaattcatgtaattt 53163  T
Q  129 caagaagttagggttaatagtcat 152  Q
    || |||||||||||||||||||||    
T  53164 caggaagttagggttaatagtcat 53187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 68027 - 68086
Alignment:
Q  93 tagtaattcaattcctaagatcaatttatgtaattgcaagaagttagggttaatagtcat 152  Q
    |||| |||||| |||||| ||||||| |||| ||| ||||||||||||||||||||||||    
T  68027 tagtcattcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcat 68086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 227284 - 227157
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| | ||| |||| |||||||||||||||||||||||||| ||||    
T  227284 tatctctaggttcctatgttgaattaaacagaattattatttcaggattaaaagctatgattagtagtcattcaattcctaagatcaatttatgtgattg 227185  T
Q  129 caagaagttagggttaatagtcatgcaa 156  Q
     |||||| || |||||||||||||||||    
T  227184 taagaagctatggttaatagtcatgcaa 227157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 1338 - 1216
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||     
T  1338 tatctctaggttcctatgttgaatcaaacagatttactaattcaggattaaaagctagggttaatagtcattcaattcctaatatcaattcatataatt- 1240  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||| ||| ||||||||||||||||    
T  1239 caaaaagctagggttaatagtcat 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 28842 - 28965
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||| ||||||||||||| ||||||| || |||||     
T  28842 tatctttaggttcctatgttgaatcaaacaggattactaattcaagattaaaagctagggttagtagtcattcaattcctaatatcaattcatataattt 28941  T
Q  129 caagaagttagggttaatagtcat 152  Q
    ||||||| ||||||||||||||||    
T  28942 caagaagctagggttaatagtcat 28965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 2385 - 2298
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaa 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||    
T  2385 tatctctaggttcctatgttgaatcaaacaggattactatttcaggattaaaagctagggttagtagtcattcaattcctaatatcaa 2298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 6222 - 6123
Alignment:
Q  29 tatctctaggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattg 128  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| |||| |||| ||||||||||||| ||||||| |||||||||    
T  6222 tatctctaggttcctatgttgaatcaaacaggattcctatttcagaattaaaagctagagttagtagtcattcaattcctaatatcaattcatgtaattg 6123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 2120 - 2022
Alignment:
Q  36 aggttcctatgttgaatcaaacagaattactatttcatgattaaaagctagggttaatagtaattcaattcctaagatcaatttatgtaattgcaagaa 134  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| |||||    
T  2120 aggttcttatgttgaattaaacagaattactatttcaggattaaaagctagggttagtagtcattcagttcctaagatcaatttatgtgattgaaagaa 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 20018 - 20111
Alignment:
Q  166 cacaaataatcttgaataaagactaggattccattgaattaaaaaagagagttca-aacaaattacatggttcatagatcacaatagattcatctca 261  Q
    ||||||||||  ||||||||||||||| || ||||||  | |||  ||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  20018 cacaaataattctgaataaagactaggttttcattgatgtcaaa--gagagttcttaacaaattacatggttcacagatcacaa-agattcatctca 20111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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