View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5772_high_3 (Length: 412)
Name: NF5772_high_3
Description: NF5772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5772_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 6176284 - 6176026
Alignment:
| Q |
1 |
aagatactttgttatgaagaaaatatagaaactaggtaccccacatgaatacataaaaagaaaggttgaaacttgaagagtagaaaatagtaataataat |
100 |
Q |
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| T |
6176284 |
aagatactttgttatgaagaaaatatagaaactaggtaccccacatgaatacataaaaagaaaggttgaaacttgaagagtagaaaatagtaataataat |
6176185 |
T |
|
| Q |
101 |
acctcactttcacagtcatattcatcagtgtcattaccactgagtcctcctcctcctgctccaacagaagaggaagtgacatttatagcatggtttgatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6176184 |
acctcactttcacagtcatattcatcagtgtcattaccactgagtcctcc---tcctgctccaacagaagaggaagtgacatttatagcatggtttgatc |
6176088 |
T |
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| Q |
201 |
tagaagttgaatcaagggctgagatctttccatcttgaagctggttaatggatcctggcatg |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6176087 |
tagaagttgaatcaagggctgagatctttccatcttgaagctggttaatggatcctggcatg |
6176026 |
T |
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