View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5772_high_9 (Length: 311)
Name: NF5772_high_9
Description: NF5772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5772_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 25 - 305
Target Start/End: Complemental strand, 37930826 - 37930546
Alignment:
| Q |
25 |
gaccatcaagtactctcattatgcaggacaacacataatttcaactatgatacaacacataataaagtaataataatcaagaatgaatggctttcatgac |
124 |
Q |
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| T |
37930826 |
gaccatcaagtactctcattatgcaggacaacacataatttcaactatgatacaacacataataaagtaatactaatcaagaatgaatggctttcatgac |
37930727 |
T |
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| Q |
125 |
tacaatacagtaaaataagcagaaataaataatgaaacacaaataccatatgactattgaagacattttatcaaattcataagttacaaagtaacagaat |
224 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
37930726 |
cacaatacattaaaataagcagaaataaataatgaaacacaaataccatatgactattgaagacattttatcaaattcataacttacaaagtaacagaat |
37930627 |
T |
|
| Q |
225 |
gcaatgtaatcaaactcacttgtgaagctattcttgcagaatcattatcttgatgcatcattacagccatacctttgcttc |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37930626 |
gcaatgtaatcaaactcacttgtgaagctattcttgcagaatcattatcttgatgcatcattacagccataccattgcttc |
37930546 |
T |
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