View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5772_low_14 (Length: 258)

Name: NF5772_low_14
Description: NF5772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5772_low_14
NF5772_low_14
[»] chr1 (42 HSPs)
chr1 (22-145)||(42831941-42832064)
chr1 (20-124)||(23463985-23464089)
chr1 (22-145)||(46116152-46116275)
chr1 (39-145)||(19793537-19793643)
chr1 (23-145)||(20357455-20357576)
chr1 (23-145)||(20562379-20562500)
chr1 (20-145)||(15774290-15774415)
chr1 (22-117)||(538335-538430)
chr1 (26-145)||(4429460-4429579)
chr1 (23-145)||(38019925-38020048)
chr1 (39-145)||(15368816-15368922)
chr1 (39-145)||(37733766-37733872)
chr1 (47-124)||(18309567-18309644)
chr1 (22-67)||(23930600-23930645)
chr1 (24-145)||(48110525-48110646)
chr1 (20-116)||(4354112-4354208)
chr1 (21-145)||(37490883-37491007)
chr1 (22-145)||(49251373-49251496)
chr1 (23-145)||(3532952-3533073)
chr1 (23-145)||(12073055-12073177)
chr1 (39-117)||(15051558-15051636)
chr1 (22-67)||(18923941-18923986)
chr1 (22-119)||(43555878-43555975)
chr1 (23-135)||(21884570-21884682)
chr1 (19-67)||(34560393-34560441)
chr1 (89-145)||(39994826-39994882)
chr1 (26-70)||(43513999-43514043)
chr1 (49-145)||(47939177-47939272)
chr1 (20-67)||(5172658-5172705)
chr1 (22-81)||(9408656-9408715)
chr1 (24-145)||(47763363-47763485)
chr1 (25-67)||(29442023-29442065)
chr1 (22-67)||(29331220-29331265)
chr1 (25-113)||(29491466-29491555)
chr1 (25-113)||(38021248-38021337)
chr1 (23-124)||(49916435-49916536)
chr1 (29-117)||(17889062-17889150)
chr1 (23-67)||(24661977-24662021)
chr1 (20-116)||(27745149-27745245)
chr1 (16-116)||(30649081-30649181)
chr1 (23-67)||(49010756-49010800)
chr1 (23-142)||(49606678-49606798)
[»] chr3 (42 HSPs)
chr3 (21-145)||(33206750-33206874)
chr3 (24-124)||(49146080-49146180)
chr3 (21-124)||(42271012-42271115)
chr3 (39-139)||(32876100-32876200)
chr3 (22-145)||(45713474-45713597)
chr3 (23-145)||(14417863-14417985)
chr3 (23-117)||(16277957-16278051)
chr3 (21-145)||(43566774-43566898)
chr3 (50-145)||(362965-363060)
chr3 (21-124)||(35483262-35483365)
chr3 (23-145)||(17439943-17440065)
chr3 (26-124)||(48173284-48173382)
chr3 (24-109)||(32665277-32665362)
chr3 (24-124)||(13539963-13540063)
chr3 (27-139)||(40786279-40786391)
chr3 (23-67)||(50720417-50720461)
chr3 (23-67)||(50792387-50792431)
chr3 (22-145)||(50724362-50724484)
chr3 (22-145)||(50788364-50788486)
chr3 (25-145)||(47191369-47191490)
chr3 (23-143)||(16006486-16006606)
chr3 (23-67)||(21420245-21420289)
chr3 (23-67)||(49639023-49639067)
chr3 (21-124)||(32508793-32508896)
chr3 (49-124)||(35477752-35477827)
chr3 (29-144)||(38682237-38682352)
chr3 (21-68)||(54983764-54983811)
chr3 (26-124)||(335029-335127)
chr3 (21-67)||(24751316-24751362)
chr3 (26-108)||(29507215-29507297)
chr3 (23-124)||(13874833-13874933)
chr3 (39-124)||(23820640-23820725)
chr3 (91-144)||(28206516-28206569)
chr3 (22-67)||(34503209-34503254)
chr3 (40-145)||(39492833-39492938)
chr3 (39-119)||(41121882-41121963)
chr3 (25-113)||(42823995-42824084)
chr3 (93-142)||(48558751-48558800)
chr3 (100-145)||(48821036-48821081)
chr3 (39-67)||(17269374-17269402)
chr3 (39-119)||(47062071-47062150)
chr3 (35-67)||(53467956-53467988)
[»] chr8 (40 HSPs)
chr8 (23-145)||(43468683-43468805)
chr8 (23-139)||(15042349-15042465)
chr8 (21-124)||(9524950-9525053)
chr8 (21-145)||(40249856-40249982)
chr8 (23-109)||(25119203-25119289)
chr8 (23-124)||(24608482-24608583)
chr8 (21-145)||(14010750-14010874)
chr8 (22-124)||(9737359-9737461)
chr8 (22-134)||(5184876-5184988)
chr8 (21-145)||(13762490-13762614)
chr8 (23-139)||(39484354-39484470)
chr8 (22-145)||(8682375-8682498)
chr8 (22-145)||(17987427-17987550)
chr8 (22-145)||(25689366-25689489)
chr8 (19-145)||(4798519-4798645)
chr8 (23-117)||(10970261-10970355)
chr8 (39-145)||(24074517-24074623)
chr8 (21-67)||(31373313-31373359)
chr8 (22-124)||(34073238-34073340)
chr8 (22-108)||(40329220-40329306)
chr8 (21-67)||(41225721-41225767)
chr8 (21-67)||(42688049-42688095)
chr8 (39-124)||(8740655-8740740)
chr8 (22-67)||(23857380-23857425)
chr8 (23-67)||(2376513-2376557)
chr8 (23-67)||(28465613-28465657)
chr8 (23-67)||(29108657-29108701)
chr8 (49-113)||(35301173-35301237)
chr8 (26-126)||(42761862-42761962)
chr8 (20-67)||(7649521-7649568)
chr8 (16-67)||(9578058-9578109)
chr8 (20-67)||(17980274-17980321)
chr8 (23-117)||(1032967-1033060)
chr8 (21-67)||(6064370-6064416)
chr8 (25-134)||(14012608-14012718)
chr8 (22-68)||(25689502-25689548)
chr8 (21-67)||(43847695-43847741)
chr8 (39-124)||(26703889-26703974)
chr8 (47-119)||(3747860-3747932)
chr8 (35-145)||(44360915-44361022)
[»] chr6 (32 HSPs)
chr6 (23-145)||(34396078-34396200)
chr6 (22-145)||(12089091-12089214)
chr6 (39-139)||(9438313-9438413)
chr6 (23-134)||(7563565-7563676)
chr6 (23-117)||(21507207-21507301)
chr6 (23-145)||(30566053-30566175)
chr6 (27-124)||(15288954-15289051)
chr6 (22-145)||(9491713-9491836)
chr6 (21-124)||(22389749-22389852)
chr6 (27-145)||(12127887-12128005)
chr6 (24-124)||(35190759-35190859)
chr6 (22-65)||(34365729-34365772)
chr6 (26-124)||(5288344-5288442)
chr6 (39-145)||(18904661-18904767)
chr6 (41-135)||(26528580-26528674)
chr6 (23-116)||(8233081-8233174)
chr6 (40-124)||(12101898-12101982)
chr6 (23-67)||(19642603-19642647)
chr6 (29-117)||(31741469-31741557)
chr6 (29-67)||(858139-858176)
chr6 (39-145)||(19165362-19165467)
chr6 (22-67)||(10377180-10377225)
chr6 (22-67)||(22501012-22501057)
chr6 (43-124)||(23771048-23771129)
chr6 (25-113)||(24470401-24470490)
chr6 (28-108)||(6296923-6297003)
chr6 (28-108)||(6303733-6303813)
chr6 (21-77)||(16269763-16269819)
chr6 (39-75)||(24623533-24623569)
chr6 (29-145)||(25020506-25020622)
chr6 (23-67)||(32057029-32057073)
chr6 (23-67)||(34521988-34522032)
[»] chr5 (31 HSPs)
chr5 (28-145)||(29096286-29096403)
chr5 (22-145)||(32158392-32158515)
chr5 (24-139)||(7645086-7645201)
chr5 (39-124)||(26169013-26169096)
chr5 (39-145)||(30403761-30403867)
chr5 (20-124)||(20945890-20945994)
chr5 (23-139)||(27219547-27219663)
chr5 (35-115)||(34010542-34010622)
chr5 (39-139)||(42455378-42455478)
chr5 (22-145)||(19058982-19059105)
chr5 (28-135)||(29144142-29144249)
chr5 (23-145)||(2029106-2029228)
chr5 (38-124)||(14487571-14487657)
chr5 (24-145)||(18872517-18872636)
chr5 (26-132)||(26302485-26302590)
chr5 (39-124)||(20762292-20762377)
chr5 (39-139)||(6561909-6562009)
chr5 (23-119)||(33800888-33800984)
chr5 (27-74)||(29841347-29841394)
chr5 (27-145)||(18478002-18478120)
chr5 (21-67)||(40339155-40339201)
chr5 (23-124)||(4666445-4666546)
chr5 (23-116)||(21017613-21017706)
chr5 (28-65)||(30394569-30394606)
chr5 (23-116)||(39760069-39760162)
chr5 (17-145)||(843346-843474)
chr5 (23-67)||(22599991-22600035)
chr5 (36-72)||(22863777-22863813)
chr5 (23-67)||(29050795-29050839)
chr5 (24-95)||(35112962-35113033)
chr5 (23-67)||(36888149-36888193)
[»] chr2 (41 HSPs)
chr2 (24-124)||(17115543-17115643)
chr2 (43-145)||(44422122-44422224)
chr2 (22-145)||(580761-580884)
chr2 (23-145)||(1836583-1836705)
chr2 (39-145)||(16028086-16028192)
chr2 (21-139)||(8234776-8234894)
chr2 (23-145)||(22538534-22538656)
chr2 (24-109)||(38530208-38530294)
chr2 (23-116)||(27495533-27495626)
chr2 (21-109)||(36520794-36520882)
chr2 (22-145)||(17154643-17154766)
chr2 (21-124)||(30474194-30474297)
chr2 (19-145)||(3179315-3179441)
chr2 (43-145)||(19905633-19905735)
chr2 (23-116)||(10262734-10262827)
chr2 (25-145)||(11133072-11133193)
chr2 (19-144)||(20122454-20122579)
chr2 (27-124)||(34620517-34620614)
chr2 (19-124)||(36426855-36426960)
chr2 (27-67)||(9791951-9791991)
chr2 (39-145)||(31956877-31956984)
chr2 (26-81)||(36481067-36481122)
chr2 (22-124)||(2114434-2114536)
chr2 (23-145)||(7086248-7086370)
chr2 (22-124)||(14879122-14879224)
chr2 (43-117)||(18386818-18386892)
chr2 (39-145)||(32891292-32891398)
chr2 (39-145)||(32943350-32943456)
chr2 (39-145)||(44721682-44721788)
chr2 (23-124)||(16973903-16974004)
chr2 (35-116)||(18007256-18007337)
chr2 (27-116)||(22297459-22297548)
chr2 (23-76)||(31564090-31564143)
chr2 (40-105)||(35502091-35502156)
chr2 (55-112)||(39334892-39334949)
chr2 (22-67)||(39726490-39726535)
chr2 (21-117)||(10207638-10207734)
chr2 (23-67)||(15392267-15392311)
chr2 (23-67)||(15690090-15690134)
chr2 (26-81)||(27016278-27016333)
chr2 (22-74)||(33001602-33001654)
[»] chr7 (32 HSPs)
chr7 (27-145)||(47552212-47552330)
chr7 (23-145)||(21925470-21925592)
chr7 (23-117)||(22706034-22706128)
chr7 (27-117)||(30152740-30152830)
chr7 (39-145)||(35368407-35368513)
chr7 (19-119)||(38778683-38778783)
chr7 (38-138)||(38792222-38792322)
chr7 (21-109)||(49012391-49012479)
chr7 (39-145)||(24396956-24397062)
chr7 (21-124)||(30644162-30644265)
chr7 (22-124)||(7262997-7263099)
chr7 (39-117)||(21086115-21086193)
chr7 (23-145)||(34948101-34948223)
chr7 (22-67)||(8195909-8195954)
chr7 (21-145)||(2366350-2366474)
chr7 (23-135)||(22965946-22966058)
chr7 (19-67)||(36316030-36316078)
chr7 (23-67)||(46337924-46337968)
chr7 (26-124)||(2261483-2261581)
chr7 (24-113)||(31475850-31475940)
chr7 (22-124)||(42887148-42887250)
chr7 (55-124)||(4042267-4042336)
chr7 (22-75)||(4104474-4104527)
chr7 (23-68)||(25087005-25087050)
chr7 (23-124)||(25818281-25818382)
chr7 (23-67)||(4818015-4818059)
chr7 (23-67)||(22741198-22741242)
chr7 (23-67)||(29710156-29710200)
chr7 (23-91)||(29778976-29779044)
chr7 (23-67)||(34962028-34962072)
chr7 (23-67)||(44437881-44437925)
chr7 (24-68)||(45197314-45197358)
[»] chr4 (49 HSPs)
chr4 (26-145)||(12856182-12856301)
chr4 (26-124)||(32885686-32885784)
chr4 (22-124)||(47017945-47018047)
chr4 (27-124)||(34773682-34773779)
chr4 (21-145)||(9924849-9924973)
chr4 (23-139)||(21476065-21476181)
chr4 (22-116)||(45350270-45350364)
chr4 (22-116)||(45359749-45359843)
chr4 (39-124)||(3465594-3465679)
chr4 (23-124)||(13211351-13211452)
chr4 (27-124)||(26203786-26203883)
chr4 (22-67)||(50783490-50783535)
chr4 (21-145)||(9172349-9172473)
chr4 (21-145)||(20753103-20753227)
chr4 (23-67)||(43115263-43115307)
chr4 (21-144)||(44074847-44074969)
chr4 (20-67)||(46735025-46735072)
chr4 (26-124)||(3544431-3544529)
chr4 (39-117)||(16201307-16201385)
chr4 (23-125)||(49089275-49089377)
chr4 (23-117)||(55656114-55656208)
chr4 (20-145)||(17859770-17859895)
chr4 (25-113)||(40150469-40150558)
chr4 (49-113)||(11872894-11872958)
chr4 (23-67)||(20266857-20266901)
chr4 (24-116)||(26253948-26254040)
chr4 (23-67)||(50657875-50657919)
chr4 (23-145)||(548865-548987)
chr4 (20-67)||(4722520-4722567)
chr4 (22-145)||(29269293-29269415)
chr4 (40-139)||(35332972-35333071)
chr4 (22-145)||(38433305-38433428)
chr4 (25-145)||(48968188-48968309)
chr4 (22-124)||(53291436-53291538)
chr4 (24-117)||(55266443-55266534)
chr4 (19-77)||(55345755-55345813)
chr4 (23-145)||(56546427-56546549)
chr4 (23-124)||(9285658-9285759)
chr4 (23-124)||(24234073-24234174)
chr4 (90-135)||(33536287-33536332)
chr4 (22-67)||(46482873-46482918)
chr4 (22-67)||(52743222-52743267)
chr4 (23-67)||(5430421-5430465)
chr4 (27-145)||(8690212-8690331)
chr4 (25-144)||(12820384-12820504)
chr4 (27-67)||(35031382-35031422)
chr4 (49-145)||(41003150-41003245)
chr4 (55-135)||(46222881-46222960)
chr4 (24-59)||(47678628-47678664)
[»] scaffold1086 (1 HSPs)
scaffold1086 (23-145)||(2483-2605)
[»] scaffold0178 (2 HSPs)
scaffold0178 (41-117)||(16078-16154)
scaffold0178 (27-124)||(4322-4419)
[»] scaffold0533 (1 HSPs)
scaffold0533 (35-145)||(9333-9443)
[»] scaffold0343 (1 HSPs)
scaffold0343 (41-134)||(8573-8666)
[»] scaffold0039 (1 HSPs)
scaffold0039 (23-124)||(101826-101927)


Alignment Details
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 42831941 - 42832064
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| || ||| ||| || ||||| ||||||| || |||||||||| ||||||||| |    
T  42831941 tgtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcaccttataaggtga 42832040  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  |  ||||||||||||||||    
T  42832041 attctagtcactaggctatctgac 42832064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 23464089 - 23463985
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || |||| |||||||||||||||    
T  23464089 attgtcccatgagcatagttcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttgttcactttataaggt 23463990  T
Q  120 caatt 124  Q
     ||||    
T  23463989 gaatt 23463985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 46116275 - 46116152
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| | ||||||||||||| |||||||| |||| || ||| ||| || | ||| ||||||| || | |||||||| ||||||||| |    
T  46116275 tgtcccgtgagcatagcttagttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattattcaccttataaggtga 46116176  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  ||||||||||||| |||||    
T  46116175 attctaaccactaggctacctgac 46116152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 19793537 - 19793643
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || |||  ||| | | ||| ||||||| || |||||||||| ||||||||| ||||  ||||||||||||    
T  19793537 tcagttggtaggacaatgcattattatatgcaggggccggaattcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggct 19793636  T
Q  139 atctgac 145  Q
    | |||||    
T  19793637 acctgac 19793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 20357455 - 20357576
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || ||| ||| || | ||| ||||||| |  |||||||||| ||||||||| ||    
T  20357455 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaac-ccggacaactaacttattcaccttataaggtgaa 20357553  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  |||||||||| ||||||||    
T  20357554 ttctaaccactaggttatctgac 20357576  T

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Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 20562500 - 20562379
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || ||| ||| || | ||| ||||||| |  |||||||||| ||||||||| ||    
T  20562500 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaac-ccggacaactaacttattcaccttataaggtgaa 20562402  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  |||||||||| ||||||||    
T  20562401 ttctaaccactaggttatctgac 20562379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 15774415 - 15774290
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    |||||||||||||| ||  ||||||||||||||| |||||||||||||  | |||| || || | ||| ||||||| || |||||||||| |||||||||    
T  15774415 attgtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggt 15774316  T
Q  120 caatttcaaccactaggctatctgac 145  Q
     ||||  | |||||| |||| |||||    
T  15774315 gaattctagccactaagctacctgac 15774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 538430 - 538335
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||| || |||  ||||| | ||| ||| ||| || |||||||||| |||||||    
T  538430 tgtcccgtgagcatagttcagttggtagaacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttattcaccttataag 538335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 4429579 - 4429460
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaattt 125  Q
    |||||||| ||| ||||||||||||||| ||||||||||||| || ||||||| || | ||| | | |||| | |||||||||  ||||||||| ||||     
T  4429579 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccctgaacattccacttattcatcttataaggtgaattc 4429480  T
Q  126 caaccactaggctatctgac 145  Q
     | ||||||| |||||||||    
T  4429479 tagccactagactatctgac 4429460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 38020048 - 38019925
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtac-aaactccggacatcctacttattcactttataaggtca 121  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  ||||| | |||| || |||| || |||||||||| |||||| || |    
T  38020048 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaaccccagacaccccacttattcaccttataaagtga 38019949  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||||||| |||||    
T  38019948 attctagccactaggctacctgac 38019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 15368816 - 15368922
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || ||||||||| |||||||||| ||||  | ||||||||||    
T  15368816 tcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagccactaggct 15368915  T
Q  139 atctgac 145  Q
    | |||||    
T  15368916 acctgac 15368922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 37733766 - 37733872
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| ||  ||  || || | ||| ||||||| || |||||||||| ||||||||| ||||  ||||||||||||    
T  37733766 tcagttggtaggacaatgcattattatatgcagtggacggggttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggct 37733865  T
Q  139 atctgac 145  Q
    | |||||    
T  37733866 acctgac 37733872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 18309567 - 18309644
Alignment:
Q  47 taggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| ||||||||||||| || ||||||||||   ||  |||||||||||||||||||||||||| |||| ||||    
T  18309567 taggacaatgcattattatatgcaggggttggagttagaatcccggacatcctacttattcactttatgaggtgaatt 18309644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 23930645 - 23930600
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||    
T  23930645 tgtcccgtgagcatagttcagttggtaggacaatgcattattatat 23930600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 48110525 - 48110646
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||| ||| ||||||||||| ||| ||||||||||||| || |||||||||| | |||  |||||| |  |||||||||  ||||||||| ||     
T  48110525 tcccgtgagcgtagctcagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcatcttataaggtgaaa 48110624  T
Q  124 ttcaaccactaggctatctgac 145  Q
    |  | ||||||||||| |||||    
T  48110625 tctagccactaggctacctgac 48110646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 4354208 - 4354112
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | |||| |||||| || |||||||||| ||||||    
T  4354208 attgtcctgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcaccttataa 4354112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 37490883 - 37491007
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||  ||||||||||||||| ||||||||||||| || |||  || |||| |||  |||||| ||  ||||||||  |||||||||     
T  37490883 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattcatcttataaggtg 37490982  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | ||||||||||| |||||    
T  37490983 aattctagccactaggctacctgac 37491007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 49251496 - 49251373
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    ||||| |||||| ||  ||||||||||||||| ||||||||||||| || |||| || || | ||| || |||| || |||||||||| |||||| || |    
T  49251496 tgtcctgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataatgtga 49251397  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  |||||||||| || |||||    
T  49251396 attctaaccactaggttacctgac 49251373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 3533073 - 3532952
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||||  | |||| || || | ||| ||||||| || |||||||||| ||||||||| ||    
T  3533073 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgtaggggtcgg-gttccaaccccggacaccccacttattcaccttataaggtgaa 3532975  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | | ||||||||| |||||    
T  3532974 ttctagctactaggctacctgac 3532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 12073177 - 12073055
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||| | |||||||||||||  |||| | |  || | ||||||||||| || | |||||||| |||||| || ||    
T  12073177 gtcccgtgagcataactcagttggtaggataatgcattattatatctaaggatcgaggttcgaactccggacacccaatttattcaccttataaagtaaa 12073078  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  ||||||||| |||||||||    
T  12073077 ttctaaccactagactatctgac 12073055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 15051558 - 15051636
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| ||| ||||||||||||| ||||||| || ||  |||||| ||||| || |||||||||| |||||||    
T  15051558 tcagttggtagaacaatgcattattatatgcaagggtcggggtttaaactctggacaccccacttattcaccttataag 15051636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 18923986 - 18923941
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||    
T  18923986 tgtcccgtgagcatagctcagttggtaggacaatgcattattatat 18923941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 43555975 - 43555878
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||||||| || || | || || ||||| | ||||| || ||||||| || |||||||||    
T  43555975 tgtctcgtgagcatagctcagttggtaggacaatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggt 43555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 21884570 - 21884682
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||| || |||  |  || | ||| || |||| || |||||||||| ||||||||| ||    
T  21884570 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaa 21884669  T
Q  123 tttcaaccactag 135  Q
    ||  |||||||||    
T  21884670 ttctaaccactag 21884682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 34560441 - 34560393
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||| |||| ||||||||||||| | |||||||||||||    
T  34560441 aattgtcccgtgagtttagctcagttggtaggataatgcattattatat 34560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 39994882 - 39994826
Alignment:
Q  89 ccggacatcctacttattcactttataaggtcaatttcaaccactaggctatctgac 145  Q
    |||||||||| |||||||||| ||||||||| ||||  | |||||||||||||||||    
T  39994882 ccggacatcccacttattcaccttataaggtgaattctagccactaggctatctgac 39994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 43513999 - 43514043
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatataca 70  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||    
T  43513999 ccgtgagcatagtttagttggtaggacgttgcattattatataca 43514043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 47939272 - 47939177
Alignment:
Q  49 ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggctatctgac 145  Q
    ||||| |||||| |||||| || ||||||| || | ||||||||||| || |||||||||| |||| |||| ||||  ||||||||||||| |||||    
T  47939272 ggacaatgcattgttatatgca-gggttggggttcgaactccggacaccccacttattcaccttattaggtgaattctaaccactaggctacctgac 47939177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 5172705 - 5172658
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  5172705 attgtcccgtgagcatagctcagttgataggacaatgcattattatat 5172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 9408715 - 9408656
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagt 81  Q
    |||||||||||| ||| ||||||||||||||| |||||||||| || || |||| |||||    
T  9408715 tgtcccgtgagcatagctcagttggtaggacaatgcattattaaatgcaggggtcggagt 9408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 47763485 - 47763363
Alignment:
Q  24 tcccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    |||||||||| ||| |||||||| ||| ||| ||||||||||||| || |||  ||||| | |||  ||||||||| |||||||||||||| || || ||    
T  47763485 tcccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggagttcgaacctcggacatcccacttattcacttta-aaagtgaa 47763387  T
Q  123 tttc-aaccactaggctatctgac 145  Q
    |||| | ||||||||||| |||||    
T  47763386 tttctagccactaggctacctgac 47763363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 29442065 - 29442023
Alignment:
Q  25 cccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  29442065 cccgtgagcatagctcagttggtaggacaatgcattattatat 29442023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 29331265 - 29331220
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| | ||||||||||||| |||||||||||||    
T  29331265 tgtcccgtgagcatagcttagttggtaggacaatgcattattatat 29331220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 29491466 - 29491555
Alignment:
Q  25 cccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||||||| ||| |||||||| ||| ||| ||||||||||||| || |||| || || | ||| ||||||| || ||||||||||||||    
T  29491466 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttta 29491555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 38021248 - 38021337
Alignment:
Q  25 cccgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||||||| ||| |||||||| | ||||| ||||||||||||| || |||  ||||| | ||| ||||||| || ||||||||||||||    
T  38021248 cccgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcacttta 38021337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 49916435 - 49916536
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| |||||||||||||  | |||| || || | ||  |||||||||| | |||||||  ||||||||| ||    
T  49916435 gtcccgtgagcatagatcaattggtaggacaatgcattattatatgtaggggtcggggttcgaatcccggacatcccatttattcatattataaggtgaa 49916534  T
Q  123 tt 124  Q
    ||    
T  49916535 tt 49916536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 17889062 - 17889150
Alignment:
Q  29 tgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||  ||||||||||||| | || |||||||||| || |  | || || | |||||||||||||| |||||||||| |||||||    
T  17889062 tgagcttaactcagttggtaggataatgtattattatatgcaggaatcggggttcgaactccggacatcccacttattcaccttataag 17889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 24661977 - 24662021
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  24661977 gtcccgtgagcatagctcaattggtaggacaatgcattattatat 24662021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 27745149 - 27745245
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||||||||||||| ||| ||| ||||||||| | ||||||||||||| || || | || || | ||| ||||||| || | |||||||| ||||||    
T  27745149 attgtcccgtgagcatagctcatttggtaggaaaatgcattattatatgcagggatcggggttcgaaccccggacaccccatttattcaccttataa 27745245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 30649081 - 30649181
Alignment:
Q  16 atgaattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttata 115  Q
    ||||| ||||||||||||  || ||||||| |||||||  |||||||||||| || | ||||| || | ||| || |||| || |||||||||| |||||    
T  30649081 atgaagtgtcccgtgagcaaagctcagttgataggacaacgcattattatatgcaggagttggggttcgaaccccagacaccccacttattcaccttata 30649180  T
Q  116 a 116  Q
    |    
T  30649181 a 30649181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 49010800 - 49010756
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| || ||||||||||    
T  49010800 gtcccgtgagcatagctcagttggtaggacaatgtattattatat 49010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 49606798 - 49606678
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa-ggtca 121  Q
    ||||||| ||| ||| ||||||| ||||||| |||||||||||||  | |||  ||||| | |||| |||||| || |||||||||  |||||| ||| |    
T  49606798 gtcccgtaagcatagctcagttgttaggacaatgcattattatatgtaggggccggagttcgaacttcggacaccccacttattcagcttataagggtga 49606699  T
Q  122 atttcaaccactaggctatct 142  Q
    |||| | ||||||| ||||||    
T  49606698 attttagccactagactatct 49606678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 33206750 - 33206874
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| || ||| ||| || | ||| ||||||| || |||||||||| |||||||||     
T  33206750 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcaccttataaggtg 33206849  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | ||||||||||| |||||    
T  33206850 aattctagccactaggctacctgac 33206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 49146080 - 49146180
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| || |||| || || | ||| ||||||| || |||||||||||||||||||| |||    
T  49146080 tcccgtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaat 49146179  T
Q  124 t 124  Q
    |    
T  49146180 t 49146180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 42271115 - 42271012
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||| || |||  || || | ||||||||||| ||||||||||||| |||||||||     
T  42271115 ttgtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggggccggggttcgaactccggacaccctacttattcaccttataaggtg 42271016  T
Q  121 aatt 124  Q
    ||||    
T  42271015 aatt 42271012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 32876200 - 32876100
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || |||| | ||| |||||  ||||||||||| |||||||| ||||||||| ||||  |||||||| |||    
T  32876200 tcagttggtaggacaatgcattattatatgcaggggtcgaagttcaaacctcggacatcctatttattcacattataaggtgaattctaaccactaagct 32876101  T
Q  139 a 139  Q
    |    
T  32876100 a 32876100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 45713474 - 45713597
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||  | ||||||||||||| |||||||||||||  | |||  ||||| | ||||||||||| || |||||||||| ||||||||| |    
T  45713474 tgtcccgtgagcataacttagttggtaggacaatgcattattatatgtaggggccggagttcgaactccggacaccccacttattcaccttataaggtga 45713573  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  ||| ||||||||| |||||    
T  45713574 attctaactactaggctacctgac 45713597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 14417863 - 14417985
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||| ||||| ||| ||| ||||||||||| ||||||||||||| || ||| |||||| | ||| ||||||| || |||||||||| ||||||||| ||    
T  14417863 gtcccatgagcatagctcaattggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataaggtgaa 14417962  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | |||||| |||| |||||    
T  14417963 ttctagccactaagctacctgac 14417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 16278051 - 16277957
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| ||| ||||||||||||||  ||||||||||||| || |||| ||  | | |||||||||||||| |||||||||| |||||||    
T  16278051 gtcccgtgagcatagctcagttggtaggaccatgcattattatatgcaggggtcgggattcgaactccggacatcccacttattcaccttataag 16277957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 43566898 - 43566774
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||| || |||| || || | |||  | |||| || |||||||||| |||||||||     
T  43566898 ttgtcccgtgaacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcaccttataaggtg 43566799  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | ||||||||||| |||||    
T  43566798 aattctagccactaggctacctgac 43566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 362965 - 363060
Alignment:
Q  50 gacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggctatctgac 145  Q
    |||| ||||||||||||| || |||| ||||| | ||| ||||| | || |||||||||||||||||||| ||||  || ||||||||||||||||    
T  362965 gacaatgcattattatatgcaggggtcggagttcgaaccccggataccccacttattcactttataaggtgaattctaatcactaggctatctgac 363060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 35483262 - 35483365
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| |||||| |||||||| ||||||||||||| || |||| || || | ||  ||||||| || |||||||||| |||||||||     
T  35483262 ttgtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataaggta 35483361  T
Q  121 aatt 124  Q
    ||||    
T  35483362 aatt 35483365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 17440065 - 17439943
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| || |||||||||||| ||||||||||||| || |||  || ||   |||  |||| | || |||||||||| ||||||||| ||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgcaggggccggtgtttgaacctcggataccccacttattcaccttataaggtgaa 17439966  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||| ||||||||||||| |||||    
T  17439965 ttttaaccactaggctacctgac 17439943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 48173284 - 48173382
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||| ||| |||||||||| |||| |||||||||||||  | |||||||||| | ||| ||||||| |  |||||||||| ||||||||| ||||    
T  48173284 ccgtgagcatagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattcaccttataaggtgaatt 48173382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 32665277 - 32665362
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcac 109  Q
    |||||| ||| ||| |||||| |||||| | ||||||||||||| ||||||| || || ||||||||||||| || ||||||||||    
T  32665277 tcccgttagcatagctcagttagtaggataatgcattattatatgcaagggtcggggttcaaactccggacaccccacttattcac 32665362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 13540063 - 13539963
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||  ||| ||||||||||||||| |||||||||||||  | ||||||| || | ||| ||||||| || ||||||| || ||||||||| |||    
T  13540063 tcccgtgagtatagctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataaggtgaat 13539964  T
Q  124 t 124  Q
    |    
T  13539963 t 13539963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 40786279 - 40786391
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttc 126  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || |||| || || | |||  | |||  || |||||||| ||||||||||| ||||      
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacctcagacgccccacttattctctttataaggtgaattct 40786378  T
Q  127 aaccactaggcta 139  Q
    |||||||||||||    
T  40786379 aaccactaggcta 40786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 50720417 - 50720461
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  50720417 gtcccgtgagcatagttcagttggtaggacaatgcattattatat 50720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 50792431 - 50792387
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  50792431 gtcccgtgagcatagttcagttggtaggacaatgcattattatat 50792387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 50724362 - 50724484
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||| || ||||||| || | |||  |||||| || |||||||||| ||| || || |    
T  50724362 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaagtga 50724460  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||||||| |||||    
T  50724461 attctagccactaggctacctgac 50724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 50788486 - 50788364
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||| || ||||||| || | |||  |||||| || |||||||||| ||| || || |    
T  50788486 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaagtga 50788388  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||||||| |||||    
T  50788387 attctagccactaggctacctgac 50788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 47191369 - 47191490
Alignment:
Q  25 cccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    ||||||||| ||| |||||||| ||| ||| ||||||||||||| || ||| |||||| | ||| ||| ||| || |||||||||| ||||||| | |||    
T  47191369 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcaccttataagatgaat 47191468  T
Q  124 ttcaaccactaggctatctgac 145  Q
    |  | ||||||||||| |||||    
T  47191469 tctagccactaggctacctgac 47191490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 16006606 - 16006486
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||| ||| |||||||| |||| |||| || || || | ||| || |||| || |||||||||| ||||||||| ||    
T  16006606 gtcccgtgagcataactcagttggtagaacaatgcattataatatgcaagagtcggggttcgaaccccagacaccccacttattcaccttataaggtgaa 16006507  T
Q  123 tttcaaccactaggctatctg 143  Q
    ||  ||||||||  |||||||    
T  16006506 ttctaaccactaaactatctg 16006486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 21420289 - 21420245
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||    
T  21420289 gtcccgtgagtttagctcagttggtaggacaatgcattattatat 21420245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 49639023 - 49639067
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  49639023 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 49639067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 32508896 - 32508793
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||  ||||||| ||||| | ||||||||||||| || |||| || || | ||| ||| ||| || |||||||||| |||||||||     
T  32508896 ttgtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtg 32508797  T
Q  121 aatt 124  Q
    ||||    
T  32508796 aatt 32508793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 35477752 - 35477827
Alignment:
Q  49 ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||||||||||||||  | | || ||||| | ||||||||||| || |||||||||| ||||||||| ||||    
T  35477752 ggacattgcattattatatttaggtgtcggagttcgaactccggacaccccacttattcaccttataaggtgaatt 35477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 38682352 - 38682237
Alignment:
Q  29 tgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaa 128  Q
    ||||| ||||||| ||||||||||| | ||||||||||| || |||| ||  | | ||  ||||||| ||| ||||||||  ||||||||| ||||  ||    
T  38682352 tgagcatagttcatttggtaggacaatacattattatatgcaggggtcgggattcgaatcccggacaccctccttattcatcttataaggtgaattctaa 38682253  T
Q  129 ccactaggctatctga 144  Q
    |||||| |||||||||    
T  38682252 ccactaagctatctga 38682237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 54983811 - 54983764
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatata 68  Q
    ||||||||||||| ||| ||||||||||||| | ||||||||||||||    
T  54983811 ttgtcccgtgagcatagctcagttggtaggataatgcattattatata 54983764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 335127 - 335029
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||| ||| | ||||||||||||| |||||||||||||  ||||   ||||| | ||| | ||||| || |||||||||| ||||||||| ||||    
T  335127 ccgtgagcatagcttagttggtaggacaatgcattattatatgtaaggaccggagttcgaaccctggacaccccacttattcaccttataaggtgaatt 335029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 24751362 - 24751316
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||||    
T  24751362 ttgtcccgtgagcatagctcagttagtaggacaatgcattattatat 24751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 29507215 - 29507297
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattca 108  Q
    |||||||||||  ||||||||||||||| ||||||||||||| || | ||||  || | |||||| ||||| | |||||||||    
T  29507215 ccgtgagcttaactcagttggtaggacaatgcattattatatgcaggagttgtggttcgaactccagacattccacttattca 29507297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 13874933 - 13874833
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||| | ||| ||||||||| ||||| ||||||||||||| || |||| || || ||||  || ||||||| | |||||||| ||||||||| ||    
T  13874933 gtcccgtgaacatagctcagttggt-ggacaatgcattattatatgcaggggtcggggttcaaatcccagacatcccatttattcaccttataaggtgaa 13874835  T
Q  123 tt 124  Q
    ||    
T  13874834 tt 13874833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 23820640 - 23820725
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||||| ||||||||||||| || |||  ||||| | ||| || |||| || |||||||||  ||||||||| ||||    
T  23820640 tcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccagacaccccacttattcatcttataaggtgaatt 23820725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 28206569 - 28206516
Alignment:
Q  91 ggacatcctacttattcactttataaggtcaatttcaaccactaggctatctga 144  Q
    |||||||| |||||||||| ||||||||| ||||  ||||||||||||| ||||    
T  28206569 ggacatcccacttattcaccttataaggtgaattctaaccactaggctacctga 28206516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 34503209 - 34503254
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||| ||||||| ||| ||||||||||||||| |||||||||||||    
T  34503209 tgtctcgtgagcatagctcagttggtaggacaatgcattattatat 34503254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 39492833 - 39492938
Alignment:
Q  40 cagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggcta 139  Q
    |||||| ||||||| ||||||||||||| || ||| ||| || | ||| || |||| || ||||||| || ||||||||| ||||  |||||||| ||||    
T  39492833 cagttgttaggacaatgcattattatatgcatgggctggggttcgaaccccagacaccccacttatttacgttataaggtgaattctaaccactaagcta 39492932  T
Q  140 tctgac 145  Q
     |||||    
T  39492933 cctgac 39492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 41121882 - 41121963
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctac-ttattcactttataaggt 119  Q
    ||||||||||||||| ||||||||||||| ||  ||| || || ||||| ||||||| || || |||||||| |||||||||    
T  41121882 tcagttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccggacaccccactttattcaccttataaggt 41121963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 42824084 - 42823995
Alignment:
Q  25 cccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||||||| ||  |||||||| ||| ||| | |||||||||||||||||||||| || | ||   |||||| |||||||||||||||||    
T  42824084 cccgtgagcataactcagttggcaggcacaatacattattatatacaagggttggggttcgaatctcggacaccctacttattcacttta 42823995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 48558751 - 48558800
Alignment:
Q  93 acatcctacttattcactttataaggtcaatttcaaccactaggctatct 142  Q
    |||||| |||||||||||||||||||| ||||  | ||||||||||||||    
T  48558751 acatcccacttattcactttataaggtgaattatagccactaggctatct 48558800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 48821036 - 48821081
Alignment:
Q  100 acttattcactttataaggtcaatttcaaccactaggctatctgac 145  Q
    |||||||||| ||||||||| ||||| ||||||||||||| |||||    
T  48821036 acttattcaccttataaggtgaattttaaccactaggctacctgac 48821081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 17269402 - 17269374
Alignment:
Q  39 tcagttggtaggacattgcattattatat 67  Q
    |||||||||||||||||||||||||||||    
T  17269402 tcagttggtaggacattgcattattatat 17269374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 47062150 - 47062071
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    ||||||||||||||| |||||||||||||  | |||| ||||| | ||| ||||||| || | ||||| ||||||||||||    
T  47062150 tcagttggtaggacaatgcattattatat-gatgggtcggagttcgaaccccggacaccccatttattaactttataaggt 47062071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 53467956 - 53467988
Alignment:
Q  35 tagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||||||||| |||||||||||||    
T  53467956 tagttcagttggtaggacaatgcattattatat 53467988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 43468805 - 43468683
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| |||||| ||||||  | |||| || || | ||||||||||| || |||||||||| ||||||||| ||    
T  43468805 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataaggtgaa 43468706  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | |||||||||||||||||    
T  43468705 ttctagccactaggctatctgac 43468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 15042465 - 15042349
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || |||||||||| ||||||||| ||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 15042366  T
Q  123 tttcaaccactaggcta 139  Q
    ||  |||||||| ||||    
T  15042365 ttctaaccactacgcta 15042349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 9524950 - 9525053
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| || |||| ||||||||||||| |||||||||     
T  9524950 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataaggtg 9525049  T
Q  121 aatt 124  Q
    ||||    
T  9525050 aatt 9525053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 40249982 - 40249856
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggaca--tcctacttattcactttataagg 118  Q
    ||||||||||||| ||  ||||||||||||||| ||||||||||||| ||  | | ||||| | |||||||||||  ||| |||||||||| |||||||     
T  40249982 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatgcagtgatcggagttcgaactccggacacctcccacttattcaccttataaga 40249883  T
Q  119 tcaatttcaaccactaggctatctgac 145  Q
    | ||||  ||||||||||||| |||||    
T  40249882 tgaattctaaccactaggctacctgac 40249856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 25119203 - 25119289
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcac 109  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| || ||||||| || | ||| |||||||||| ||| ||||||    
T  25119203 gtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacatcccactcattcac 25119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 24608583 - 24608482
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| || |||| ||||||||||||| ||||||||| ||    
T  24608583 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataaggtgaa 24608484  T
Q  123 tt 124  Q
    ||    
T  24608483 tt 24608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 14010874 - 14010750
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| |||||||||| |||| |||||||||||||   | ||| || || | ||| ||||||| || |||||||||| |||||||||     
T  14010874 ttgtcccgtgagcatagctcagttggtaagacagtgcattattatatgttatggtcggggttcgaaccccggacaccccacttattcaccttataaggta 14010775  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | |||||| ||||||||||    
T  14010774 aattctagccactaagctatctgac 14010750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 9737461 - 9737359
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| | |||||||||||| | |||  |  || | ||||||||||| || ||||||| |||||||||||| |    
T  9737461 tgtcccgtgagcatagctcagttggtaggacaatacattattatatataggggccgaggttcgaactccggacaccccacttatttactttataaggtga 9737362  T
Q  122 att 124  Q
    |||    
T  9737361 att 9737359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 5184988 - 5184876
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    ||||| |||||| ||| ||||||||||||||| || |||||||||| || ||| ||| || | ||| | ||||| || |||||||||| ||||||||| |    
T  5184988 tgtcctgtgagcatagctcagttggtaggacaatggattattatatgcaggggctggggttcgaaccctggacaccccacttattcaccttataaggtga 5184889  T
Q  122 atttcaaccacta 134  Q
    |||  ||||||||    
T  5184888 attctaaccacta 5184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 13762614 - 13762490
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||| || ||||  | || | |||  |||||| || |||||||||| ||| |||||     
T  13762614 ttgtcctgtgagcatagttcagttggtaggacaatgcattattatatgcaggggtcagtgttcgaaccacggacaccccacttattcaccttacaaggta 13762515  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  || || ||| |||||||||    
T  13762514 aattctaatcattagactatctgac 13762490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 39484470 - 39484354
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||  ||||||| || |||||||||  ||||||||| ||    
T  39484470 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaatgccggacaccccacttattcatcttataaggtgaa 39484371  T
Q  123 tttcaaccactaggcta 139  Q
    ||  |||||||| ||||    
T  39484370 ttctaaccactacgcta 39484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 8682375 - 8682498
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| | | ||||||||| || |||||||||| | ||| |||||||  |  |||||||| | |||||||| |    
T  8682375 tgtcccgtgagcatagctcagttggtaggacaattctttattatatgcaggggttggagttcgaaccccggacagtccccttattcattatataaggtga 8682474  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  |  |||||||||| |||||    
T  8682475 attctagtcactaggctacctgac 8682498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 17987550 - 17987427
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||| | ||| ||||||||||||| | ||||||||||||| || |||  ||||| | ||| ||||||| || | |||||||| ||||||||| |    
T  17987550 tgtcccgtgaacatagctcagttggtaggataatgcattattatatgcaggggccggagttcgaaccccggacaccccaattattcaccttataaggtga 17987451  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | |||||||| || |||||    
T  17987450 attatagccactaggatacctgac 17987427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 25689489 - 25689366
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||| ||||||| ||| ||||||||||||||| |||||||||||||  | |||  |  || | ||| ||||||| |||||||| |||| |||||| || |    
T  25689489 tgtctcgtgagcatagctcagttggtaggacactgcattattatatgtaggggccgaggttcgaaccccggacaccctacttaatcaccttataaagtga 25689390  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  ||||||||||||| |||||    
T  25689389 attctaaccactaggctacctgac 25689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 4798645 - 4798519
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataagg 118  Q
    ||||||||||||||  ||| ||||||||||||| | ||||||||||||| || |||  || || | ||| ||||||| || |||||||||| || |||||    
T  4798645 aattgtcccgtgagtatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaagg 4798546  T
Q  119 tcaatttcaaccactaggctatctgac 145  Q
    | ||||  | ||||||| ||| |||||    
T  4798545 tgaattctagccactagactacctgac 4798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 10970261 - 10970355
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    |||| |||||| ||| ||||||||||||| | ||||||||||||| || ||| ||| || ||||| ||| ||| || |||||||||| |||||||    
T  10970261 gtcctgtgagcatagctcagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttattcaccttataag 10970355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 24074517 - 24074623
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| |||||||||||||  | |||||| ||| | |||  |||||| |  |||||||||| ||||||||| ||||  | ||||||||||    
T  24074517 tcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataaggtgaattctagccactaggct 24074616  T
Q  139 atctgac 145  Q
    | |||||    
T  24074617 acctgac 24074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 31373313 - 31373359
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  31373313 ttgtcccgtgagcatagctcagttggtaggacattacattattatat 31373359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 34073340 - 34073238
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||  | ||||    || | ||| ||||||| || |||||||||| ||||||||| |    
T  34073340 tgtcccgtgagcgtagttcagttggtaggataatgcattattatatgtaggggtcaaggttcgaaccccggacaccccacttattcaccttataaggtga 34073241  T
Q  122 att 124  Q
    |||    
T  34073240 att 34073238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 40329306 - 40329220
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattca 108  Q
    |||||||||||| ||| || |||||||| ||| |||||||||||||| |  |||||||||   |||| ||||||||| |||||||||    
T  40329306 tgtcccgtgagcatagctcggttggtagaacaatgcattattatatatagcggttggagtttgaacttcggacatcccacttattca 40329220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 41225767 - 41225721
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  41225767 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatat 41225721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 42688049 - 42688095
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  42688049 ttgtctcgtgagcatagttcagttggtaggacaatgcattattatat 42688095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 8740740 - 8740655
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||||| |||| |||||||| || ||| ||  || | ||||||||||| ||||||||||||  ||||||||| ||||    
T  8740740 tcagttggtaggacaatgcagtattatatgcaggggctgaggttcgaactccggacaccctacttattcatcttataaggtgaatt 8740655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 23857425 - 23857380
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||    
T  23857425 tgtcccgtgagcatagctcagttggtaggacaatgcattattatat 23857380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 2376513 - 2376557
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  2376513 gtcccgtgagcatagttcaattggtaggacaatgcattattatat 2376557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 28465613 - 28465657
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  28465613 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 28465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 29108657 - 29108701
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 29108701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 35301237 - 35301173
Alignment:
Q  49 ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||| ||||||||||||| || |||| || || | ||||||||||| |||||||||||||||||    
T  35301237 ggacaatgcattattatatgcaggggtcggggttcgaactccggacaccctacttattcacttta 35301173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 42761962 - 42761862
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaattt 125  Q
    |||||||| ||  |||||||||| |||| ||||||||||||| || |||  || || | ||||| |||||  | |||||||||||||||||||| |||||    
T  42761962 ccgtgagcataactcagttggtatgacaatgcattattatatgcagggggcggggttcgaactctggacactccacttattcactttataaggtgaattt 42761863  T
Q  126 c 126  Q
    |    
T  42761862 c 42761862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 7649521 - 7649568
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  7649521 attgtcccgtgagcatagctcacttggtaggacaatgcattattatat 7649568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 9578109 - 9578058
Alignment:
Q  16 atgaattgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||  |||||||||||||||||||| || ||| |||||||||||||    
T  9578109 atgaattgtaacgtgagcttagttcagttggcagaacaatgcattattatat 9578058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 17980274 - 17980321
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||| ||| |||||||||||||||  ||||||||||||    
T  17980274 attgtcccgtgagcatagctcagttggtaggacaaagcattattatat 17980321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 1033060 - 1032967
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||  ||| ||||||||| ||||| ||||||||||||| || |||| ||||| | ||| ||| ||| || |||||||||| |||||||    
T  1033060 gtcccgtgagtctagctcagttggtgggacaatgcattattatatgcaggggtcggagttcgaac-ccgaacaccccacttattcaccttataag 1032967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 6064370 - 6064416
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||||||| ||| ||||| ||||| |||||||||||||    
T  6064370 ttgtcccgtgagcttagctcaattggttggacaatgcattattatat 6064416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 14012608 - 14012718
Alignment:
Q  25 cccgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    ||||||||| |||||||||||| | ||||| |||||| |||||| || |||  || || | || |||||||| || |||||||||| ||||||||| |||    
T  14012608 cccgtgagcatagttcagttggcagggacaatgcattgttatatgcaggggccggggttcgaagtccggacaccccacttattcacattataaggtgaat 14012707  T
Q  124 ttcaaccacta 134  Q
    || | ||||||    
T  14012708 tttagccacta 14012718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 25689548 - 25689502
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatata 68  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  25689548 tgtcccgtgagcatagctcagttggttggacaatgcattattatata 25689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 43847695 - 43847741
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||| ||||||| ||| ||||||||||||||| |||||||||||||    
T  43847695 ttgtctcgtgagcatagctcagttggtaggacaatgcattattatat 43847741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 26703974 - 26703889
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||||| ||||||||||||| ||||||| || || | ||  ||| ||| |  |||||||||| ||||||||| ||||    
T  26703974 tcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttattcaccttataaggtgaatt 26703889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 3747932 - 3747860
Alignment:
Q  47 taggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    ||||||| |||||||||||||| | ||||||  || ||||  || |||| ||||||||||||| |||||||||    
T  3747932 taggacaatgcattattatatataggggttgtggttcaaatcccagacaccctacttattcaccttataaggt 3747860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 44361022 - 44360915
Alignment:
Q  35 tagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccacta 134  Q
    ||||||||||||||||||| |||   ||||||| || ||||||| || | ||| |||  ||||| |||||| ||| ||||||||| ||||  | ||||||    
T  44361022 tagttcagttggtaggacaatgc---attatatgcaggggttggggttcgaaccccgatcatcccacttatccaccttataaggtgaattctagccacta 44360926  T
Q  135 ggctatctgac 145  Q
    | |||||||||    
T  44360925 gactatctgac 44360915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 34396078 - 34396200
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| || |||  ||||| | ||||||||||| |||| |||||||| ||||||||| ||    
T  34396078 gtcccgtgagcatagttcagttggtacgacaatgcattattatatgcaggggccggagttcgaactccggacaccctatttattcaccttataaggtgaa 34396177  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  ||||| ||| ||| |||||    
T  34396178 ttctaaccaatagactacctgac 34396200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 12089091 - 12089214
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  ||||| | ||| ||||||| || |||||||||| ||||||||| |    
T  12089091 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtga 12089190  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | |||||||| || |||||    
T  12089191 attctagccactaggatacctgac 12089214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 9438313 - 9438413
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || ||||||| || | ||| ||||||| || ||| |||||| ||||||||| ||||  ||||||||||||    
T  9438313 tcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacaccccactcattcaccttataaggtgaattctaaccactaggct 9438412  T
Q  139 a 139  Q
    |    
T  9438413 a 9438413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 7563676 - 7563565
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| || || ||||  | || ||||| ||||||| || |||||||||| ||||||||| ||    
T  7563676 gtcccgtgagcatagctcagttggtaggacaatgcattattacatgcaggggtcagggttcaaaccccggacaccccacttattcaccttataaggtgaa 7563577  T
Q  123 tttcaaccacta 134  Q
    ||| | ||||||    
T  7563576 ttttagccacta 7563565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 21507301 - 21507207
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| ||| | ||||||||||||| || |||||||||| || |||| |||||   ||||||||||| || ||||||||||||||||||    
T  21507301 gtcccgtgagcatagcttagttggtaggacaatgtattattatatgcaggggtcggagtttgaactccggacaccccacttattcactttataag 21507207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 30566053 - 30566175
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| ||  ||||| |||   ||| ||||||| || |||||||||| ||||||||| ||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 30566152  T
Q  123 tttcaaccactaggctatctgac 145  Q
    || || ||||||| ||| |||||    
T  30566153 ttccagccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 15289051 - 15288954
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| |||||||||||||||||||||||||||||||||  | ||| ||| || | |||||| |||| || |||||||||  ||||||||| ||||    
T  15289051 cgtgagcatagttcagttggtaggacattgcattattatatgtaggggctggggttcgaactccagacaccccacttattcatcttataaggtgaatt 15288954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 9491836 - 9491713
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||  | |||  || || | ||| ||||||| || |||||||||| ||||||| | |    
T  9491836 tgtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataagatga 9491737  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  ||||||||||||| |||||    
T  9491736 attctaaccactaggctaactgac 9491713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 22389852 - 22389749
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| || ||||  | || | ||  ||||||| || |||||||||| |||||||||     
T  22389852 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtg 22389753  T
Q  121 aatt 124  Q
    ||||    
T  22389752 aatt 22389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 12128005 - 12127887
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttc 126  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || |||| ||| | | ||| |||||||  | |||||||||| ||||||||| ||||      
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattct 12127906  T
Q  127 aaccactaggctatctgac 145  Q
    | ||||||| ||| |||||    
T  12127905 agccactagactacctgac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 35190759 - 35190859
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||| ||||| ||| ||||||||||| ||| ||||||||||||| || |||| ||||| | ||| ||| ||| || |||||||||| ||||||||| |||    
T  35190759 tcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcaccttataaggtgaat 35190858  T
Q  124 t 124  Q
    |    
T  35190859 t 35190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 34365729 - 34365772
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattat 65  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  34365729 tgtcccgtgagcatagttcagttggtaggacaatgcattattat 34365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 5288442 - 5288344
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||| ||  ||||||||||||||| ||||||||||||| || |||| || || | ||||||||||| |  | |||||||| ||||||||| ||||    
T  5288442 ccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggtccgaactccggacacctcaattattcaccttataaggtgaatt 5288344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 18904767 - 18904661
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| |||||||||||||  | |||  || || | ||||| ||||| || |||||||||| ||||||||| ||||  | ||||||||||    
T  18904767 tcagttggtaggacaatgcattattatatgtatgggccggggttcgaactctggacaccccacttattcaccttataaggtgaattctagccactaggct 18904668  T
Q  139 atctgac 145  Q
    | |||||    
T  18904667 acctgac 18904661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 26528580 - 26528674
Alignment:
Q  41 agttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactag 135  Q
    ||||||||| ||| ||||||||||||| || |||| || || |||||  |||||| || |||||||||| ||||||||| ||||| || ||||||    
T  26528580 agttggtagaacaatgcattattatatgcaggggtcggggttcaaacctcggacaccccacttattcaccttataaggtaaattttaaacactag 26528674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 8233081 - 8233174
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||||||| ||| ||||||||||||||| | ||||||||||||||  |||  | || | ||||||| ||| | ||||||||||| ||||||    
T  8233081 gtcccgtgagcatagctcagttggtaggacaatacattattatatacagaggtcagggttcgaactccgaacaccttacttattcaccttataa 8233174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 12101898 - 12101982
Alignment:
Q  40 cagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||||||||| | ||||||||||| || |||  || || | ||| ||||||| ||||||||||||| ||||||||| ||||    
T  12101898 cagttggtaggacaatacattattatatgcaggggccggcgttcgaaccccggacaccctacttattcaccttataaggtgaatt 12101982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 19642647 - 19642603
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  19642647 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 19642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 31741557 - 31741469
Alignment:
Q  29 tgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||| ||| ||||||||||||||| |||||||||||||  | || ||||||| | || | ||||||||| | |||||||| |||||||    
T  31741557 tgagcatagctcagttggtaggacaatgcattattatatgtagggattggagttcgaatttcggacatcccatttattcaccttataag 31741469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 858176 - 858139
Alignment:
Q  29 tgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  858176 tgagcttagttcagttggtaggacattg-attattatat 858139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 19165362 - 19165467
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| ||  |||||| || | ||| || |||| || |||||||||| ||||||||| ||||  | ||||||| ||    
T  19165362 tcagttggtaggacaatgcattattatatgcagaggttggggttcgaac-cccgacaccccacttattcaccttataaggtgaattctagccactagtct 19165460  T
Q  139 atctgac 145  Q
    | |||||    
T  19165461 acctgac 19165467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 10377225 - 10377180
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||  ||| ||||||||||||||| |||||||||||||    
T  10377225 tgtcccgtgagtatagctcagttggtaggacaatgcattattatat 10377180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 22501012 - 22501057
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||| ||||| ||| ||||||||||||||| |||||||||||||    
T  22501012 tgtcccatgagcatagctcagttggtaggacaatgcattattatat 22501057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 23771048 - 23771129
Alignment:
Q  43 ttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||| ||||||||||||| || |||  || || | ||||||||||| || | ||||||||| |||||||| ||||    
T  23771048 ttggtaggacaatgcattattatatgcaggggaaggggttcgaactccggacaccccatttattcactctataaggtgaatt 23771129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 24470490 - 24470401
Alignment:
Q  25 cccgtgagcttagttcagttggtag-gacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||| ||| ||| |||||||| || |||| |||||||||||||||| |||  ||||| | ||| ||||| |||| ||||||||||||||    
T  24470490 cccgtaagcatagctcagttggcagagacaatgcattattatatacaggggccggagttcgaaccccggaaatcccacttattcacttta 24470401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 6297003 - 6296923
Alignment:
Q  28 gtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattca 108  Q
    |||||| ||| || |||| ||||||| ||||||||||||| ||| ||| ||| | | |||  |||||||||||||||||||    
T  6297003 gtgagcatagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattca 6296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 6303813 - 6303733
Alignment:
Q  28 gtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattca 108  Q
    |||||| ||| || |||| ||||||| ||||||||||||| ||| ||| ||| | | |||  |||||||||||||||||||    
T  6303813 gtgagcatagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattca 6303733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 16269819 - 16269763
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttg 77  Q
    ||||| ||||||| ||| || |||||||||||| ||||||||||||| || ||||||    
T  16269819 ttgtctcgtgagcatagctcggttggtaggacagtgcattattatatgcaggggttg 16269763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 24623533 - 24623569
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggt 75  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  24623533 tcagttggtaggacaatgcattattatatgcaagggt 24623569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 25020622 - 25020506
Alignment:
Q  29 tgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaa 128  Q
    ||||| ||| |||| |||||||||  ||||||||||||| || |||   | || | ||| ||||||| || |||||||||| ||||||||| ||||  |     
T  25020622 tgagcatagctcagctggtaggacgatgcattattatatgcaggggcctgggttcgaaccccggacaccccacttattcaccttataaggtgaattctag 25020523  T
Q  129 ccactaggctatctgac 145  Q
    ||||||||||| |||||    
T  25020522 ccactaggctacctgac 25020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 32057029 - 32057073
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  32057029 gtcccgtgagcatagctcagttgataggacaatgcattattatat 32057073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 34521988 - 34522032
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||    
T  34521988 gtcccgtgagcatagtccagttggtaggacaatgaattattatat 34522032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 29096403 - 29096286
Alignment:
Q  28 gtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttca 127  Q
    |||||| ||| ||||||||||||||| ||||||||||||| ||||||  ||||| | ||| ||||||| || |||||||||| ||||||||| ||||  |    
T  29096403 gtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattcta 29096304  T
Q  128 accactaggctatctgac 145  Q
     ||||||||||| |||||    
T  29096303 gccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 32158515 - 32158392
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||| || |||  || || | ||| ||| ||| || |||||||||| ||||||||| |    
T  32158515 tgtcccgtgagcttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtga 32158416  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||||||| |||||    
T  32158415 attctagccactaggctacctgac 32158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 7645201 - 7645086
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||| ||| | ||||||||||||| ||||||||||||| ||  ||||||||| |||| |  ||||| |  |||||||||| ||||||||| |||    
T  7645201 tcccgtgagcatagcttagttggtaggacaatgcattattatatgcagaggttggagttcaaattttggacacctcacttattcaccttataaggtgaat 7645102  T
Q  124 ttcaaccactaggcta 139  Q
    || | |||| ||||||    
T  7645101 tttagccacaaggcta 7645086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 26169096 - 26169013
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||||| ||||||||||||| || |||||||||| | ||| |||||||  | |||||||||| ||||||||| ||||    
T  26169096 tcagttggtaggacaatgcattattatatgcaggggttggagttcgaaccccggaca--cgacttattcaccttataaggtaaatt 26169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 30403761 - 30403867
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| | |||||||||||||| |||  |||||   ||| ||||||| || |||||||||| ||||||||| ||||  |||||||| |||    
T  30403761 tcagttggtaggacaatacattattatatacaggggccggagtttgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaagct 30403860  T
Q  139 atctgac 145  Q
    | |||||    
T  30403861 acctgac 30403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 20945994 - 20945890
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    |||||||||||||| ||  ||| ||||||||||| ||||||||||||| || |||  || || | || |||||||| || |||||||||| |||||||||    
T  20945994 attgtcccgtgagcataactcaattggtaggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcaccttataaggt 20945895  T
Q  120 caatt 124  Q
     ||||    
T  20945894 gaatt 20945890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 27219663 - 27219547
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| | ||||||||||||| ||||||||||||| || |||  || || ||||| ||| ||| || |||||||||| | ||||||| ||    
T  27219663 gtcccgtgagcatagcttagttggtaggacaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttattcacctaataaggtgaa 27219564  T
Q  123 tttcaaccactaggcta 139  Q
    ||  | |||||||||||    
T  27219563 ttctagccactaggcta 27219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 34010542 - 34010622
Alignment:
Q  35 tagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttata 115  Q
    ||||||||||||||||||| |||||||||||||| | |||| ||||| | ||| |||||||||  | |||||||| |||||    
T  34010542 tagttcagttggtaggacaatgcattattatatataggggtcggagttcgaaccccggacatctcatttattcaccttata 34010622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 42455478 - 42455378
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || |||  ||||| | ||| |||||||  | |||||||||| ||||||||| ||||  | ||||||||||    
T  42455478 tcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacactccacttattcaccttataaggtgaattctagccactaggct 42455379  T
Q  139 a 139  Q
    |    
T  42455378 a 42455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 19059105 - 19058982
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| |||||||| |||| || |||  || || | ||| | ||||| || |||||||||| ||||||||| |    
T  19059105 tgtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacaccccacttattcaccttataaggtga 19059006  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||| ||| |||||    
T  19059005 attctagccactagcctacctgac 19058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 29144142 - 29144249
Alignment:
Q  28 gtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttca 127  Q
    |||||||||  ||||||||||||||| ||||||||||||| || |||| || ||   |||||| |||| || | |||||||| ||||||||| ||||  |    
T  29144142 gtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggtttgaactccagacaccccatttattcacgttataaggtgaattcta 29144241  T
Q  128 accactag 135  Q
    ||||||||    
T  29144242 accactag 29144249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 2029228 - 2029106
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  | ||||||||||||| || |||||||||| || |||| ||  | | ||| ||| ||| || |||||||||| ||||||||| ||    
T  2029228 gtcccgtgagcataacttagttggtaggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtgaa 2029129  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | |||||||||||||||||    
T  2029128 ttctagccactaggctatctgac 2029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 14487571 - 14487657
Alignment:
Q  38 ttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||||||||||| |||||||||||||  | ||||||| || | |||  |||| |||| |||||||||| ||||||||| ||||    
T  14487571 ttcagttggtaggacaatgcattattatatgtaggggttggggttcgaacctcggatatcccacttattcaccttataaggtgaatt 14487657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 18872517 - 18872636
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||| || |||| || || | ||| ||| ||| || |||||||||| |  |||||| |||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcacct--taaggtgaat 18872614  T
Q  124 ttcaaccactaggctatctgac 145  Q
    |  | ||||||||||| |||||    
T  18872615 tctagccactaggctacctgac 18872636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 26302590 - 26302485
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaattt 125  Q
    |||||||| ||| || |||||||||||| ||||||||||||||| ||||  ||||| | |||  |||||| || |||||||||  ||||||||| |||||    
T  26302590 ccgtgagcatagctcggttggtaggacaatgcattattatatac-agggccggagttcgaacctcggacaccccacttattcatcttataaggtgaattt 26302492  T
Q  126 caaccac 132  Q
     ||||||    
T  26302491 taaccac 26302485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 20762292 - 20762377
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||| ||| |||||||||||||| || |||||| || | ||| | ||||| || |||||||||| ||||||||| ||||    
T  20762292 tcagttggtagaacaatgcattattatatataacggttggggttcgaaccctggacaccccacttattcaccttataaggtgaatt 20762377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 6561909 - 6562009
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||| | ||||||||| ||| || || | ||||| | ||||||| ||| || || ||||||| ||||||||| ||||  ||||||||||||    
T  6561909 tcagttggtaggataatgcattattttatgcagggatcggagttcgaactccgaacaccccacatattcaccttataaggtgaattctaaccactaggct 6562008  T
Q  139 a 139  Q
    |    
T  6562009 a 6562009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 33800888 - 33800984
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || |||  || || | ||| || |||| || |||||||||| |||||||||    
T  33800888 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcaccttataaggt 33800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 29841347 - 29841394
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaaggg 74  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  29841347 cgtgagcatagctcagttggtaggacaatgcattattatatgcaaggg 29841394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 18478002 - 18478120
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttc 126  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| |  |||  || || | ||| | ||||| || |||||||||| ||||||||| ||||      
T  18478002 cgtgagcatagctcagttggtaggacaatgcattattatatgctggggccggggttcgaaccctggacaccccacttattcaccttataaggtgaattct 18478101  T
Q  127 aaccactaggctatctgac 145  Q
    | ||| ||||||| |||||    
T  18478102 agccattaggctacctgac 18478120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 40339201 - 40339155
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||||    
T  40339201 ttgtcccgtgagcatagctcagttagtaggacaatgcattattatat 40339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 4666546 - 4666445
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||| ||| ||||||||||||| ||||||| |  || | || | ||||||  | | |||||||||||||||||| ||    
T  4666546 gtcccgtgagcatagctcaattggtagaacaatgcattattatatgcaagggtcgaggttcgaatttcggacacacaatttattcactttataaggtgaa 4666447  T
Q  123 tt 124  Q
    ||    
T  4666446 tt 4666445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 21017706 - 21017613
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||||| | ||| ||||||||||||||| |||||||||||||  |  || ||| ||   ||| |||||||||| |||||||||| ||||||    
T  21017706 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgtagtggctggggtttgaaccccggacatcccacttattcaccttataa 21017613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 30394569 - 30394606
Alignment:
Q  28 gtgagcttagttcagttggtaggacattgcattattat 65  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  30394569 gtgagcttagctcagttggtaggacaatgcattattat 30394606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 39760069 - 39760162
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||||||||| ||| ||  |||||||||||| || |||||||||| || ||||||||||   ||| ||| |||||| | |||||||| ||||||    
T  39760069 gtcccgtgagtttaatttggttggtaggacaatgtattattatatgcaggggttggagtttgaaccccgaacatcccatttattcaccttataa 39760162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 843474 - 843346
Alignment:
Q  17 tgaattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||| |||||||||||| ||  |||||||||| |||| |||||||||||||  | |||  || || | ||| ||||||| || |||||||||| ||||||    
T  843474 tgaagtgtcccgtgagcatatctcagttggtatgacaatgcattattatatgtaggggacggggttcgaaccccggacaccccacttattcaccttataa 843375  T
Q  117 ggtcaatttcaaccactaggctatctgac 145  Q
      | ||||  | ||||||||||| |||||    
T  843374 attgaattctagccactaggctacctgac 843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 22600035 - 22599991
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatat 22599991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 22863777 - 22863813
Alignment:
Q  36 agttcagttggtaggacattgcattattatatacaag 72  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  22863777 agttcagttggtaggacaatgcattattatatgcaag 22863813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 29050795 - 29050839
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||| |||| ||| ||||||||||||||| |||||||||||||    
T  29050795 gtcccgcgagcatagctcagttggtaggacaatgcattattatat 29050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 35113033 - 35112962
Alignment:
Q  24 tcccgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagtacaaactccggaca 95  Q
    |||||||||||||||||||||| || ||| |||||| |||||||| || ||||||| || | |||||||||||    
T  35113033 tcccgtgagcttagttcagttgatagggatattgca-tattatatgcaggggttggggttcgaactccggaca 35112962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 36888193 - 36888149
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatat 36888149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 17115643 - 17115543
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    |||||||||| ||| ||||||||||||||| || |||||||||| ||| ||| ||||| | ||| |||||||||| | |||||||||||||||||| |||    
T  17115643 tcccgtgagcatagctcagttggtaggacactgtattattatatgcaaaggtcggagttcgaaccccggacatcccatttattcactttataaggtgaat 17115544  T
Q  124 t 124  Q
    |    
T  17115543 t 17115543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 44422122 - 44422224
Alignment:
Q  43 ttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggctatct 142  Q
    ||||||||||| ||||||||||||| || || | ||||| | ||| ||||||| || |||||||||||||||||||| ||||  ||||||||||||| ||    
T  44422122 ttggtaggacaatgcattattatatgcagggatcggagttcgaaccccggacaccccacttattcactttataaggtaaattctaaccactaggctacct 44422221  T
Q  143 gac 145  Q
    |||    
T  44422222 gac 44422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 580884 - 580761
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || |||||||||| ||||||| | |    
T  580884 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagatga 580785  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  | ||||||||||| |||||    
T  580784 attctagccactaggctacctgac 580761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 1836583 - 1836705
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||  | |  | || || | ||| ||||||| |||||||||||||  |||||||| ||    
T  1836583 gtcccgtgagcctagctcagttggtaggacaatgcattattatatgaaggaatcggggttcgaaccccggacaccctacttattcaccatataaggtgaa 1836682  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | |||||||||||||||||    
T  1836683 ttctagccactaggctatctgac 1836705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 16028192 - 16028086
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| ||  ||| || || | |||||| ||||||| |||||||||||||||||||| ||||  | |||| || ||    
T  16028192 tcagttggtaggacaatgcattattatatgcagtggtcggggttcgaactccagacatcccacttattcactttataaggtgaattctagccaccagact 16028093  T
Q  139 atctgac 145  Q
    |||||||    
T  16028092 atctgac 16028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 8234894 - 8234776
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||||  | |||  || || | ||| ||||||| || |||||||||| |||||||||     
T  8234894 ttgtcccgtgagcatagctcagttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataaggtg 8234795  T
Q  121 aatttcaaccactaggcta 139  Q
    ||||  | |||||||||||    
T  8234794 aattctagccactaggcta 8234776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 22538534 - 22538656
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || ||||||| || | ||  ||| ||| |  |||||||||| ||||||||| ||    
T  22538534 gtcccgtgagcctaactcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttattcaccttataaggtgaa 22538633  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | ||||||||||| |||||    
T  22538634 ttctagccactaggctacctgac 22538656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 38530294 - 38530208
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaaggg-ttggagtacaaactccggacatcctacttattcac 109  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||| ||| |||| || | |||| |||||| || ||||||||||    
T  38530294 tcccgtaagcttagctcagttggtaggacaatgcattattatatacaggggcttggggttcgaactgcggacaccccacttattcac 38530208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 27495533 - 27495626
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||| ||| || |||||||||||||||| ||||||||||||| || ||||||   | | ||| ||| |||||||||||||| |||||||||    
T  27495533 gtcccgtaagcataattcagttggtaggacaatgcattattatatgcaggggttgagattcgaaccccgaacatcctacttatttactttataa 27495626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 36520882 - 36520794
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcac 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||  | |||| || || | ||| ||||||| || ||||||||||    
T  36520882 ttgtcccgtgagcgtagctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcac 36520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 17154643 - 17154766
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||  || |||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || |||||||||| ||||||||| |    
T  17154643 tgtcccgtgagcataactcggttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtga 17154742  T
Q  122 atttcaaccactaggctatctgac 145  Q
     ||  | ||||||||||| |||||    
T  17154743 gttctagccactaggctacctgac 17154766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 30474297 - 30474194
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  |  || | ||| || |||| || |||||||||| |||||||||     
T  30474297 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtg 30474198  T
Q  121 aatt 124  Q
    ||||    
T  30474197 aatt 30474194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 3179315 - 3179441
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataagg 118  Q
    ||||||||||||||| ||  ||||||||||| ||| ||||||||||||| || |||| |  || | |||  | |||| || |||||||||| ||||||||    
T  3179315 aattgtcccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataagg 3179414  T
Q  119 tcaatttcaaccactaggctatctgac 145  Q
    | ||||  | ||||||||||| |||||    
T  3179415 tgaattctagccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 19905735 - 19905633
Alignment:
Q  43 ttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggctatct 142  Q
    ||||| ||||| |||||||||||||||| |||| || || | ||| ||||||| || |||||||||| ||||||||| ||||  | ||| ||||||| ||    
T  19905735 ttggttggacaatgcattattatatacaggggtcggggttcgaaccccggacacccgacttattcaccttataaggtgaattctagccattaggctacct 19905636  T
Q  143 gac 145  Q
    |||    
T  19905635 gac 19905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 10262734 - 10262827
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || |||| || || | ||| || |||| || |||||||||| ||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataa 10262827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 11133072 - 11133193
Alignment:
Q  25 cccgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    ||||||||| ||| |||||||||| ||||| |||||| |||||| || |||| || || | ||| ||||||| || |||||||||| ||||||||| |||    
T  11133072 cccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaat 11133171  T
Q  124 ttcaaccactaggctatctgac 145  Q
    |  | |||||||| || |||||    
T  11133172 tctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 20122579 - 20122454
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataagg 118  Q
    |||| |||||||||| ||| ||||||||||||||| |||||||||||||  | |||  || || | ||| |||||||  | |||||||||  ||||||||    
T  20122579 aattatcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataagg 20122480  T
Q  119 tcaatttcaaccactaggctatctga 144  Q
    | ||||  | ||||||||||| ||||    
T  20122479 tgaattctagccactaggctacctga 20122454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 34620517 - 34620614
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| ||| || |||||||||||| ||||||||||||| |||||||||| ||   ||| || ||||  ||| |||||||| ||||||||| ||||    
T  34620517 cgtgagcatagctcggttggtaggacaatgcattattatatgcaagggttggggtttgaaccccagacactctatttattcaccttataaggtgaatt 34620614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 36426960 - 36426855
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataagg 118  Q
    |||||| | |||||| ||| ||| ||||||||||| |||||||||||||  | ||||||| || | ||||||| ||| || |||||||||  ||||||||    
T  36426960 aattgttctgtgagcatagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattcatcttataagg 36426861  T
Q  119 tcaatt 124  Q
    | ||||    
T  36426860 tgaatt 36426855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 9791991 - 9791951
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  9791991 cgtgagcatagttcagttggtaggacaatgcattattatat 9791951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 31956877 - 31956984
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggaca-tcctacttattcactttataaggtcaatttcaaccactaggc 137  Q
    ||||||||||||||| |||||||||||||  | ||| ||| || | ||||||| |||  || |||||||||| ||||||||| ||||  |||||| ||||    
T  31956877 tcagttggtaggacaatgcattattatatgtaggggctggggttcgaactccgaacacccccacttattcacgttataaggtgaattctaaccaccaggc 31956976  T
Q  138 tatctgac 145  Q
    || |||||    
T  31956977 tacctgac 31956984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 36481067 - 36481122
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagt 81  Q
    |||||||| ||| ||||||||||||||| ||||||||||||| || ||| ||||||    
T  36481067 ccgtgagcatagctcagttggtaggacaatgcattattatatgcatgggctggagt 36481122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 2114536 - 2114434
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||| ||| |||||||||||||  | |||| || || | ||| ||||||| |  | |||||||| ||||||||| |    
T  2114536 tgtcccgtgagcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataaggtga 2114437  T
Q  122 att 124  Q
    |||    
T  2114436 att 2114434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 7086248 - 7086370
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| |||||||||||| || ||||||||||||| || |||  ||  | | ||| ||| ||| || | |||||||| ||||||||| ||    
T  7086248 gtcccgtgagcatagctcagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacaccccaattattcaccttataaggtgaa 7086347  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  ||||||||| ||| |||||    
T  7086348 ttctaaccactagactacctgac 7086370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 14879122 - 14879224
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| |||||| |||||||||||| | |||||||||||  | ||| || ||| ||||| ||  | | || |||||||||| ||||||||| |    
T  14879122 tgtcccgtgagcatagttccgttggtaggacaatacattattatatgtaggggctgaagttcaaaccccaaatacccaacttattcaccttataaggtga 14879221  T
Q  122 att 124  Q
    |||    
T  14879222 att 14879224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 18386892 - 18386818
Alignment:
Q  43 ttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| |||||||||||||  | ||| ||| || | ||||||||||| || |||||||||| |||||||    
T  18386892 ttggtaggacaatgcattattatatgtaggggctggggttcgaactccggacaccccacttattcaccttataag 18386818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 32891292 - 32891398
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| || |||| ||  | | ||| ||||||| || |||||||||  ||||||| | ||||  | ||||||||||    
T  32891292 tcagttggtaggacaatgcattattatatgcaggggtcggttttcgaaccccggacaccccacttattcatcttataagatgaattctagccactaggct 32891391  T
Q  139 atctgac 145  Q
    | |||||    
T  32891392 acctgac 32891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 32943350 - 32943456
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||||||| ||||||||||||| ||  || ||| || | || | |||||| || |||||||||| |||||| || ||||| | ||||||| ||    
T  32943350 tcagttggtaggacaatgcattattatatgcagaggctggggttcgaatttcggacaccccacttattcaccttataaagtaaattttagccactagact 32943449  T
Q  139 atctgac 145  Q
    | |||||    
T  32943450 acctgac 32943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 44721788 - 44721682
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    ||||||||||| ||| ||||||||||||| || |||| || || | |||  |||||| || | |||||||| ||||||||| ||||  | |||||||| |    
T  44721788 tcagttggtagaacaatgcattattatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataaggtgaattctagccactaggtt 44721689  T
Q  139 atctgac 145  Q
    |||||||    
T  44721688 atctgac 44721682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 16973903 - 16974004
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| |||||| |||||||| || |||||||||| || ||||| |  | | ||| ||||||| || ||||||| || ||||||||| ||    
T  16973903 gtcccgtgagcatagctcagtttgtaggacaatggattattatatgcaggggttaggattcgaaccccggacaccccacttatttaccttataaggtgaa 16974002  T
Q  123 tt 124  Q
    ||    
T  16974003 tt 16974004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 18007256 - 18007337
Alignment:
Q  35 tagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||||||||||||||| || ||||||||||  || |||||| || ||||| ||  ||| || ||||||||| |||||||    
T  18007256 tagttcagttggtaggacaatgtattattatatgtaaaggttggggttcaaaccccatacaccccacttattcattttataa 18007337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 22297548 - 22297459
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || | |||||||| ||||||    
T  22297548 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggcaggggttcgaaccccggacaccccatttattcaccttataa 22297459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 31564090 - 31564143
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggtt 76  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| || |||||    
T  31564090 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtt 31564143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 35502156 - 35502091
Alignment:
Q  40 cagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttat 105  Q
    |||||||||||||| |||||||||||||| | |||| |||||   ||||||||||| || ||||||    
T  35502156 cagttggtaggacaatgcattattatatataggggtcggagtttgaactccggacaccccacttat 35502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 39334949 - 39334892
Alignment:
Q  55 tgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttt 112  Q
    |||||||||||||||| ||| ||| || | |||||| ||||||| |||||||||||||    
T  39334949 tgcattattatatacaggggctggggttcgaactccagacatcccacttattcacttt 39334892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 39726535 - 39726490
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||  ||| ||||||||||||||| |||||||||||||    
T  39726535 tgtcccgtgagtctagctcagttggtaggacaatgcattattatat 39726490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 10207638 - 10207734
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    |||| |||||||| ||| ||||||||||||| | ||||||||||||| ||  ||| |||||   |||||||||||    |||||||||| |||||||    
T  10207638 ttgttccgtgagcatagctcagttggtaggataatgcattattatatgcagtggtcggagtttgaactccggacacttcacttattcaccttataag 10207734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 15392311 - 15392267
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||    
T  15392311 gtcccgtgagcataactcagttggtaggacaatgcattattatat 15392267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 15690134 - 15690090
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||| ||||||    
T  15690134 gtcccgtgagcatagctcagttggtaggacaatgcattgttatat 15690090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 27016278 - 27016333
Alignment:
Q  26 ccgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagt 81  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||| |||| |||||    
T  27016278 ccgtgagcttagttcagttggtatggatattgca-tattatatacaggggtcggagt 27016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 33001654 - 33001602
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaaggg 74  Q
    |||||||||||| ||  ||||||||||||||| ||| ||||||||| ||||||    
T  33001654 tgtcccgtgagcataactcagttggtaggacaatgcgttattatatgcaaggg 33001602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 47552212 - 47552330
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttc 126  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| ||||||  || || | ||| ||||||| ||||||||||||| ||||||||| ||||      
T  47552212 cgtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacaccctacttattcaccttataaggtgaattct 47552311  T
Q  127 aaccactaggctatctgac 145  Q
    | |||| |||||| |||||    
T  47552312 agccaccaggctacctgac 47552330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 21925470 - 21925592
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||||||  ||| || ||   |||| |||| |||| |||||||||| ||||||| | ||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatatacataggtcggggtttgaacttcggatatcccacttattcaccttataagatgaa 21925569  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | |||||||||||||||||    
T  21925570 ttctagccactaggctatctgac 21925592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 22706128 - 22706034
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||| | ||| ||||||||||||||| || |||||||||| || ||| ||  || ||||||||||||| || |||||||||| |||||||    
T  22706128 gtcccgtgaacatagctcagttggtaggacaatgtattattatatgcaggggctgaggttcaaactccggacaccccacttattcaccttataag 22706034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 30152740 - 30152830
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| ||||||||||||||| |||||||||||||| | |||| || || | ||| ||| ||| || |||||||||| |||||||    
T  30152740 cgtgagcttagctcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttattcaccttataag 30152830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 35368407 - 35368513
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggct 138  Q
    |||||||||||||||||||||||||||||  | ||| ||  || | ||||||||||| || | |||||||| ||||||||| ||||  | ||||| ||||    
T  35368407 tcagttggtaggacattgcattattatatttaggggctgtggttcgaactccggacaccccatttattcaccttataaggtgaattctagccactgggct 35368506  T
Q  139 atctgac 145  Q
    |||||||    
T  35368507 atctgac 35368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 38778783 - 38778683
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataagg 118  Q
    ||||||||||||||| ||  ||||||||||||||| ||||||||||||| || |||  |  || | ||| |||||||||| ||||||| || ||||||||    
T  38778783 aattgtcccgtgagcatatctcagttggtaggacaatgcattattatatgcaggggccgaggttctaaccccggacatcccacttatttaccttataagg 38778684  T
Q  119 t 119  Q
    |    
T  38778683 t 38778683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 38792222 - 38792322
Alignment:
Q  38 ttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggc 137  Q
    ||||||||||| |||| ||||||||||||| || ||||  ||||   ||| ||||||| ||||||||||||| ||||||||| ||||  | |||||||||    
T  38792222 ttcagttggtaagacaatgcattattatatgcaggggtcagagtttgaaccccggacaccctacttattcaccttataaggtgaattctagccactaggc 38792321  T
Q  138 t 138  Q
    |    
T  38792322 t 38792322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 49012391 - 49012479
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcac 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||  | ||||  | || |||| ||| |||| |||||||||||||    
T  49012391 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgaaggggtcagggttcaaattccagacaccctacttattcac 49012479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 24396956 - 24397062
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttc-aaccactaggc 137  Q
    |||||||| |||||| ||||||||||||| || |||| ||||| | ||| | ||||| ||||||||||||||||| || || |||||| | |||||||||    
T  24396956 tcagttggcaggacaatgcattattatatgcaggggtcggagttcgaaccctggacaccctacttattcacttta-aaagtgaatttctagccactaggc 24397054  T
Q  138 tatctgac 145  Q
    || |||||    
T  24397055 tacctgac 24397062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 30644162 - 30644265
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||  ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| || |||| || |||||||||| |||||||||     
T  30644162 ttgtcccgtgagtatagctcagttggtaggacaatgcattattatatgcaggggccggtgttcgaaccccagacaccccacttattcaccttataaggtg 30644261  T
Q  121 aatt 124  Q
    ||||    
T  30644262 aatt 30644265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 7263099 - 7262997
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||  ||| ||||||||||||||| |||||||||||||  |  ||||||||| | ||| ||| ||| |||| |||||||  ||||||||| |    
T  7263099 tgtcccgtgagtatagctcagttggtaggacaatgcattattatatgtagaggttggagttcgaaccccgaacaccctatttattcatcttataaggtga 7263000  T
Q  122 att 124  Q
    |||    
T  7262999 att 7262997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 21086115 - 21086193
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||||||| ||||||||||||| || || | | ||| | ||||||||||| || |||||||||| |||||||    
T  21086115 tcagttggtaggacaatgcattattatatgcagggatcgaagttcgaactccggacacccaacttattcaccttataag 21086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 34948101 - 34948223
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||| ||  ||  |  || | ||| ||||||| || |||||||||| ||||||||| ||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaa 34948200  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | ||||||||||| |||||    
T  34948201 ttctagccactaggctacctgac 34948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 8195909 - 8195954
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||    
T  8195909 tgtcccgtgagcatagctcagttggtaggacaatgcattattatat 8195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 2366350 - 2366474
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||  ||  ||||||| ||||||| ||||||||||||| || |||| || || | |||||  |||| || |||||||||| |||||||||     
T  2366350 ttgtcccgtgagtataactcagttgataggacaatgcattattatatgcaggggtcggggttcgaactctagacaccccacttattcaccttataaggtg 2366449  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | ||| ||||||| |||||    
T  2366450 aattctagccattaggctacctgac 2366474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 22966058 - 22965946
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||| || |||  |  || | ||| || |||| || |||||||||| ||||||||| ||    
T  22966058 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaa 22965959  T
Q  123 tttcaaccactag 135  Q
    ||  |||||||||    
T  22965958 ttctaaccactag 22965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 36316078 - 36316030
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||||| ||| ||||||||||||| | |||||||||||||    
T  36316078 aattgtcccgtgagcatagctcagttggtaggataatgcattattatat 36316030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 46337968 - 46337924
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||    
T  46337968 gtcccgtgaacatagttcagttggtaggacaatgcattattatat 46337924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 2261581 - 2261483
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||| ||| ||| ||||||||||| ||||||||||||| || |||  || || | ||  ||||||| || |||||||||| ||||||||| ||||    
T  2261581 ccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaatcccggacacccaacttattcaccttataaggtgaatt 2261483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 31475940 - 31475850
Alignment:
Q  24 tcccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||||| || ||| ||| || | ||| || |||| || ||||||||||||||    
T  31475940 tcccgtgagcatagctcagttggcagggacattgcattattatatgcaggggctggggttcgaacccctgacaccccacttattcacttta 31475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 42887148 - 42887250
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| |||||||||| |||| | ||||||||||| || ||| ||  || | ||| ||||||| || ||||||| || ||||||||| |    
T  42887148 tgtcccgtgagcatagctcagttggtacgacaattcattattatatgcaggggctgaggttcgaaccccggacaccccacttatttaccttataaggtga 42887247  T
Q  122 att 124  Q
    |||    
T  42887248 att 42887250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 4042336 - 4042267
Alignment:
Q  55 tgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||| || |||| ||||| | |||| |||||| || ||||||||| |||||||||| ||||    
T  4042336 tgcattattatatgcaggggtcggagttcgaacttcggacacccaacttattcattttataaggtgaatt 4042267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 4104474 - 4104527
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggt 75  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||||    
T  4104474 tgtcccgtgagcatagctcaattgttaggacaatgcattattatatgcaagggt 4104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 25087050 - 25087005
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatata 68  Q
    ||||||||||| ||||| |||| |||||||| ||||||||||||||    
T  25087050 gtcccgtgagcatagtttagttcgtaggacaatgcattattatata 25087005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 25818281 - 25818382
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||| | ||||||||||||| || ||| |||||| | ||| ||| |||  | ||||||||||  |||||||| ||    
T  25818281 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggggctggagttcgaaccccgaacactccacttattcaccatataaggtgaa 25818380  T
Q  123 tt 124  Q
    ||    
T  25818381 tt 25818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 4818015 - 4818059
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| | | ||||||||||||||| |||||||||||||    
T  4818015 gtcccgtgagcatcgctcagttggtaggacaatgcattattatat 4818059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 22741198 - 22741242
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| || |||||||||||| |||||||||||||    
T  22741198 gtcccgtgagcatagctcggttggtaggacaatgcattattatat 22741242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 29710200 - 29710156
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||  ||| ||||||||||||||| |||||||||||||    
T  29710200 gtcccgtgagtatagctcagttggtaggacaatgcattattatat 29710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 29778976 - 29779044
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccg 91  Q
    ||||||||||| ||| ||| ||||||||| | ||||||||||||| || |||| ||||| | |||||||    
T  29778976 gtcccgtgagcatagctcaattggtaggataatgcattattatatgcaggggtcggagttcgaactccg 29779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 34962072 - 34962028
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||| |||||| ||| ||||||||||||||| |||||||||||||    
T  34962072 gtcctgtgagcatagctcagttggtaggacaatgcattattatat 34962028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 44437925 - 44437881
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||||    
T  44437925 gtcccgtgagcatagctcagttagtaggacaatgcattattatat 44437881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 45197314 - 45197358
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatata 68  Q
    |||||||||| ||| ||||||||||||||| ||||||||| ||||    
T  45197314 tcccgtgagcatagctcagttggtaggacaatgcattattttata 45197358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 12856182 - 12856301
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaattt 125  Q
    |||||||| ||| ||||||||||||| | |||| ||||||||  | |||| ||||| | ||| ||||||| || |||||||||| ||||||||| ||||     
T  12856182 ccgtgagcatagctcagttggtaggataatgcactattatatgaaggggtcggagttcgaaccccggacaccccacttattcaccttataaggtgaattc 12856281  T
Q  126 caaccactaggctatctgac 145  Q
     |||||||| ||||||||||    
T  12856282 taaccactatgctatctgac 12856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 32885686 - 32885784
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||||| ||| ||||||||||||||| ||||||||||||| || |||| ||||| | |||  |||||| || |||||||||| ||||||||| ||||    
T  32885686 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcaccttataaggtgaatt 32885784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 47018047 - 47017945
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| || |||  || || | ||| ||||||| || |||||||||| ||||||||| |    
T  47018047 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtga 47017948  T
Q  122 att 124  Q
    |||    
T  47017947 att 47017945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 34773779 - 34773682
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| || ||| ||  || | ||| ||||||| || |||||||||||||||||||| ||||    
T  34773779 cgtgagcatagttcagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtgaatt 34773682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 9924849 - 9924973
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| || |||| || || | ||| |||||||  | |||||||||| || || |||     
T  9924849 ttgtcccgtgagcatagttcagttggtaggacaacgcattattatatgcaggggtcggggttcgaaccccggacactccacttattcaccttgtatggtg 9924948  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||| | ||||||| ||| |||||    
T  9924949 aattttatccactagactacctgac 9924973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 21476181 - 21476065
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||||||| ||||| ||||||||||||||| || |||| |  || | |||||||||||||| |||||||||  |||||| || ||    
T  21476181 gtcccgtgagcatagctcagttgataggatattgcattattatatgcaggggtcgatgttcgaactccggacatcccacttattcatcttataaagtgaa 21476082  T
Q  123 tttcaaccactaggcta 139  Q
    ||  | |||||||||||    
T  21476081 ttctagccactaggcta 21476065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 45350270 - 45350364
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||| ||  ||| ||||| | ||| ||||||| || |||||||||| ||||||    
T  45350270 tgtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataa 45350364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 45359749 - 45359843
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||| ||  ||| ||||| | ||| ||||||| || |||||||||| ||||||    
T  45359749 tgtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataa 45359843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 3465594 - 3465679
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||||||||||| ||||||||||||| || |||  ||||| | ||| ||||||| || |||||||||| ||||||||| ||||    
T  3465594 tcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaatt 3465679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 13211452 - 13211351
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| || |||| || || | ||| |||||||  | ||||||||| || ||||||| ||    
T  13211452 gtcccgtgagtatagttcagttggtaggacaatgcattattatatgcatgggtcggggttcgaaccccggacactccacttattcatttgataaggtaaa 13211353  T
Q  123 tt 124  Q
    ||    
T  13211352 tt 13211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 26203883 - 26203786
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| | ||||||| ||   ||| || ||||||| |||||||||  ||||||||| ||||    
T  26203883 cgtgagcatagctcagttggtaggacagtgcattattatataaaggggttggggtttgaacccctgacatcccacttattcatcttataaggtgaatt 26203786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 50783535 - 50783490
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  50783535 tgtcccgtgagcatagctcagttggtaggacattgcattattatat 50783490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 9172473 - 9172349
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||  ||||||||||||||| ||||||||||||| || |||| || || | |||  || ||| ||||| ||||||| | |||||||     
T  9172473 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcgaacaccctacgtattcacctaataaggta 9172374  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  |  ||||||||||||||||    
T  9172373 aattctagtcactaggctatctgac 9172349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 20753227 - 20753103
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    ||||||||||||| ||| ||||||||||||| | |||||||||||||  | |||  || || | ||| ||||||| |  |||||||||| |||||||||     
T  20753227 ttgtcccgtgagcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataaggtg 20753128  T
Q  121 aatttcaaccactaggctatctgac 145  Q
    ||||  | ||||||||||| |||||    
T  20753127 aattctagccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 43115263 - 43115307
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  43115263 gtcccgtgagcttagttcagttggtaggacaatgtattattatat 43115307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 44074847 - 44074969
Alignment:
Q  21 ttgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtc 120  Q
    |||||||| |||| ||| ||||| ||||||||| ||||||||||||| || || ||| ||| | ||  ||||||| || |||||||||| |||||||||     
T  44074847 ttgtcccgcgagcatagctcagt-ggtaggacaatgcattattatatgcagggattgaagttcgaatcccggacaccccacttattcaccttataaggtg 44074945  T
Q  121 aatttcaaccactaggctatctga 144  Q
    ||||| | ||| ||||||| ||||    
T  44074946 aattttagccattaggctacctga 44074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 46735072 - 46735025
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  46735072 attgtcccgtgagcatagctcagttggtaggacactgcattattatat 46735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 3544529 - 3544431
Alignment:
Q  26 ccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||| ||  || || | ||| ||||||  ||||||||||||| ||||||||| ||||    
T  3544529 ccgtgaacatagctcagttggtaggacaatgcattattatatgcaaaggccggggttcgaaccccggactccctacttattcacattataaggtgaatt 3544431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 16201307 - 16201385
Alignment:
Q  39 tcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||||||| |||||||||| ||  | ||||||| ||   |||||||||||||||| |||||||| |||||||    
T  16201307 tcagttggtaggacaatgcattattacatgtaggggttggggtttgaactccggacatcctatttattcaccttataag 16201385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 49089377 - 49089275
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||||||| | ||||||||||||| | ||||||||||| || |||  | ||| | ||| || ||||| | |||||||||| ||||||||| ||    
T  49089377 gtcccgtgagcttagcttagttggtaggacaatacattattatatgcaggggccgaagttcgaacccctgacattccacttattcaccttataaggtgaa 49089278  T
Q  123 ttt 125  Q
    |||    
T  49089277 ttt 49089275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 55656208 - 55656114
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||||||||| ||  ||||||||| ||||| | ||||||||||| || |||  ||||| ||||  ||||||| ||||||||||||| |||||||    
T  55656208 gtcccgtgagcataactcagttggttggacaatacattattatatgcaggggccggagttcaaatcccggacaccctacttattcaccttataag 55656114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 17859770 - 17859895
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggt 119  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||||||   | |||  ||||| | ||| ||| ||| |  |||||||||| |||||||||    
T  17859770 attgtcctgtgagcatagctcagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttattcaccttataaggt 17859869  T
Q  120 caatttcaaccactaggctatctgac 145  Q
     ||||  | ||||||||||| |||||    
T  17859870 gaattctagccactaggctacctgac 17859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 40150469 - 40150558
Alignment:
Q  25 cccgtgagcttagttcagttggtagga-cattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||||||| |||||||||||| |||| || |||||||||||||||| |||| || || | ||| ||||||| |  ||||||||||||||    
T  40150469 cccgtgagcatagttcagttggcaggaacaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattcacttta 40150558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 11872894 - 11872958
Alignment:
Q  49 ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcacttta 113  Q
    ||||| |||||||||||||  | |||| ||||| | ||| |||||||||||||||||||||||||    
T  11872894 ggacaatgcattattatatgtaggggtcggagttcgaaccccggacatcctacttattcacttta 11872958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 20266857 - 20266901
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||    
T  20266857 gtcccgtgagcttagctcatttggtaggacaatgcattattatat 20266901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 26253948 - 26254040
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataa 116  Q
    |||| ||||| ||||||||||||||| ||| || |||||||||| || |||| ||||| | ||  |||||||  | |||||||||||||||||    
T  26253948 tcccatgagcatagttcagttggtagaacaatgtattattatatgcaggggtcggagttcgaatcccggacactccacttattcactttataa 26254040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 50657875 - 50657919
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  50657875 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 50657919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 548987 - 548865
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtac-aaactccggacatcctacttattcactttataaggtca 121  Q
    ||||||||||| |||  |||||||||||||| ||||||||||||| || |||  || || | ||||| | |||| || |||||||||| ||||||||| |    
T  548987 gtcccgtgagcatagcccagttggtaggacaatgcattattatatgcaggggccggggttcgaaact-cagacaccccacttattcaccttataaggtga 548889  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||| | | ||||||||| |||||    
T  548888 attttagctactaggctacctgac 548865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 4722567 - 4722520
Alignment:
Q  20 attgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||||    
T  4722567 attgtcccgtgaacatagctcagttggtaggacaatgcattattatat 4722520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 29269415 - 29269293
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||| ||||||||| ||||| |||||||||||||  | ||| |||  | | ||| ||||||| || |||||||||  ||||| ||| |    
T  29269415 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgtaggggctgggattcgaaccccggacaccccacttattcatcttatatggtga 29269317  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||| | ||||||||||| |||||    
T  29269316 attttagccactaggctacctgac 29269293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 35333071 - 35332972
Alignment:
Q  40 cagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggcta 139  Q
    |||||||||||||| ||||||||||||| ||  ||  ||||| | ||||||| ||| || | |||||||| ||||||| |  |||| |||||||||||||    
T  35333071 cagttggtaggacaatgcattattatatgcagtggccggagttcgaactccgaacaccccatttattcaccttataagatgcattttaaccactaggcta 35332972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 38433305 - 38433428
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    ||||| |||| | ||||||||||| ||||||| |||||||||||||  | | || ||||| | ||| || |||| || |||||||||| ||||||||| |    
T  38433305 tgtcctgtgaacatagttcagttgataggacaatgcattattatatgtaggagtcggagttcgaaccccagacaccccacttattcaccttataaggtga 38433404  T
Q  122 atttcaaccactaggctatctgac 145  Q
    |||  ||| |||| |||| |||||    
T  38433405 attctaacaactaagctacctgac 38433428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 48968309 - 48968188
Alignment:
Q  25 cccgtgagcttagttcagttggtagg-acattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    ||||||||| |||||||||||| ||| ||| ||||||||||||| || |||  || || | ||| ||||||| || |||||||||||||| || || |||    
T  48968309 cccgtgagcatagttcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttta-aaagtgaat 48968211  T
Q  124 ttc-aaccactaggctatctgac 145  Q
    ||| | ||||||||||| |||||    
T  48968210 ttctagccactaggctacctgac 48968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 53291436 - 53291538
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtca 121  Q
    |||||||||||| ||  ||||||||||||| | ||||||||||||| || |||| ||| |   ||  ||||||| || |||||||||| ||||||||| |    
T  53291436 tgtcccgtgagcataactcagttggtaggataatgcattattatatgcatgggtcggaatttgaatcccggacacccaacttattcaccttataaggtga 53291535  T
Q  122 att 124  Q
    |||    
T  53291536 att 53291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 55266534 - 55266443
Alignment:
Q  24 tcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    |||||||||| ||| ||||||||||| ||| ||||||||||||| || |||| ||||| | ||  ||| ||||||||  ||||||| |||||||    
T  55266534 tcccgtgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaatcccgaacatccta--tattcaccttataag 55266443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 55345755 - 55345813
Alignment:
Q  19 aattgtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttg 77  Q
    ||||||||  ||||| ||| ||||||||||||||| ||| |||||||||||| ||||||    
T  55345755 aattgtcctttgagcatagctcagttggtaggacaatgcgttattatatacaggggttg 55345813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 56546549 - 56546427
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||| || |||  || || | |||  | |||| || |||||||||||||| || || ||    
T  56546549 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaagtgaa 56546450  T
Q  123 tttcaaccactaggctatctgac 145  Q
    ||  | ||||||||||| |||||    
T  56546449 ttctagccactaggctacctgac 56546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 9285759 - 9285658
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| ||| ||||||||||| ||||||||||||| || ||  ||| || | ||| || |||| || ||||||| || ||||||||| ||    
T  9285759 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcagggtctggggttcgaaccccagacaccccacttattaaccttataaggtgaa 9285660  T
Q  123 tt 124  Q
    ||    
T  9285659 tt 9285658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 24234174 - 24234073
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| |||||||||||| || ||||||||||||| || |||  || ||   ||| ||||||| || |||||||||  ||||||||| ||    
T  24234174 gtcccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcatcttataaggtgaa 24234075  T
Q  123 tt 124  Q
    ||    
T  24234074 tt 24234073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 33536287 - 33536332
Alignment:
Q  90 cggacatcctacttattcactttataaggtcaatttcaaccactag 135  Q
    ||||||||| | ||||||| |||||||||| |||||||||||||||    
T  33536287 cggacatccaatttattcattttataaggtgaatttcaaccactag 33536332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 46482918 - 46482873
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| || |||||||||||||||| | |||||||||||    
T  46482918 tgtcccgtgagcataattcagttggtaggacaatacattattatat 46482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 52743222 - 52743267
Alignment:
Q  22 tgtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    |||||||||||| ||| || |||||||||||| |||||||||||||    
T  52743222 tgtcccgtgagcatagctcggttggtaggacaatgcattattatat 52743267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 5430465 - 5430421
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||||||| ||| ||||||||||||||| || ||||||||||    
T  5430465 gtcccgtgagcatagctcagttggtaggacaatgtattattatat 5430421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 8690212 - 8690331
Alignment:
Q  27 cgtgagcttagttcagttggta-ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaattt 125  Q
    ||||||| ||| |||||||| | ||||| ||||||||||||| || |||| || || | ||| ||||||| || |||||||||||||| || || |||||    
T  8690212 cgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttta-aaagtgaattt 8690310  T
Q  126 c-aaccactaggctatctgac 145  Q
    | | ||||||||||| |||||    
T  8690311 ctagccactaggctacctgac 8690331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 12820504 - 12820384
Alignment:
Q  25 cccgtgagcttagttcagttggtag-gacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaat 123  Q
    ||||||||| ||| |||||||| || |||| |||||| |||||| || |||| || ||   ||| | ||||| || |||||||||| ||||||||| |||    
T  12820504 cccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttattcaccttataaggtgaat 12820405  T
Q  124 ttcaaccactaggctatctga 144  Q
    |  | ||||||||||||||||    
T  12820404 tctagccactaggctatctga 12820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 35031382 - 35031422
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatat 67  Q
    ||||||| ||| ||||||||||||||| |||||||||||||    
T  35031382 cgtgagcatagctcagttggtaggacaatgcattattatat 35031422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 41003245 - 41003150
Alignment:
Q  49 ggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactaggctatctgac 145  Q
    ||||| |||||| |||||| || |||||| ||| | ||||||||||| || |||||||||| ||| ||| | ||||  ||||||||||||| |||||    
T  41003245 ggacaatgcattgttatatgcaggggttg-agttcgaactccggacaccccacttattcaccttacaagatgaattctaaccactaggctacctgac 41003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 46222960 - 46222881
Alignment:
Q  55 tgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccactag 135  Q
    ||||||||||||| || | |||||||| | |||||| || | |||| |||||||||||| || || |||||||||||||||    
T  46222960 tgcattattatatgcaggagttggagttcgaactccagataccctatttattcacttta-aaagtgaatttcaaccactag 46222881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 47678664 - 47678628
Alignment:
Q  24 tcccgtgagcttagttcagttggta-ggacattgcat 59  Q
    ||||||||||||||||||||||||| |||||||||||    
T  47678664 tcccgtgagcttagttcagttggtagggacattgcat 47678628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 2483 - 2605
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| ||  ||||| |||   ||| ||||||| || |||||||||| ||||||||| ||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 2582  T
Q  123 tttcaaccactaggctatctgac 145  Q
    || || ||||||| ||| |||||    
T  2583 ttccagccactagactacctgac 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 16078 - 16154
Alignment:
Q  41 agttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataag 117  Q
    ||||| ||||||| ||||||||||||| || || | ||||| | ||| ||||||||||||||||||||| |||||||    
T  16078 agttgataggacaatgcattattatatgcagggatcggagttcgaaccccggacatcctacttattcaccttataag 16154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 4322 - 4419
Alignment:
Q  27 cgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatt 124  Q
    ||||||| ||| ||||||| ||||||| | ||||||||||| || |||| || || | ||| |||||||  | |||||||||||||||||||| ||||    
T  4322 cgtgagcatagctcagttgataggacaatacattattatatgcaggggtcggggttcgaaccccggacactccacttattcactttataaggtgaatt 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 9333 - 9443
Alignment:
Q  35 tagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccacta 134  Q
    |||||||||| |||||||| |||||||||| || || |||| || || | || |||| |||  | |||||||||| ||||||||| ||||  | ||||||    
T  9333 tagttcagttagtaggacaatgcattattacatgcaggggtcggggttcgaattccgaacactccacttattcaccttataaggtgaattctagccacta 9432  T
Q  135 ggctatctgac 145  Q
    |||||||||||    
T  9433 ggctatctgac 9443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 8573 - 8666
Alignment:
Q  41 agttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaatttcaaccacta 134  Q
    ||||| ||||||| |||||||||||||  | ||||||| || | ||| ||| ||| ||||||||||||| |||||| || ||||  ||||||||    
T  8573 agttgataggacaatgcattattatatgtaggggttggggttcgaaccccgaacaccctacttattcaccttataatgtgaattctaaccacta 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 101826 - 101927
Alignment:
Q  23 gtcccgtgagcttagttcagttggtaggacattgcattattatatacaagggttggagtacaaactccggacatcctacttattcactttataaggtcaa 122  Q
    ||||||||||| ||| |||| |||||||| | ||||||||||||| || |||  || || | ||| ||  |||||| |||||||||| ||||||||| ||    
T  101826 gtcccgtgagcatagctcagctggtaggataatgcattattatatgcaggggccggggttcgaaccccaaacatcccacttattcaccttataaggtgaa 101925  T
Q  123 tt 124  Q
    ||    
T  101926 tt 101927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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