View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5775-Insertion-7 (Length: 680)

Name: NF5775-Insertion-7
Description: NF5775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5775-Insertion-7
NF5775-Insertion-7
[»] chr3 (45 HSPs)
chr3 (8-280)||(49086231-49086503)
chr3 (474-680)||(49083927-49084133)
chr3 (8-180)||(17469610-17469782)
chr3 (8-180)||(47147467-47147639)
chr3 (8-179)||(25787463-25787634)
chr3 (8-179)||(25829420-25829591)
chr3 (8-179)||(42598118-42598289)
chr3 (8-180)||(33751506-33751678)
chr3 (8-179)||(51435821-51435992)
chr3 (9-180)||(42602064-42602235)
chr3 (8-166)||(5844726-5844884)
chr3 (8-180)||(50020192-50020364)
chr3 (8-180)||(50034484-50034656)
chr3 (8-180)||(49822652-49822824)
chr3 (8-158)||(30688609-30688759)
chr3 (24-180)||(33936381-33936537)
chr3 (8-116)||(25450188-25450296)
chr3 (7-102)||(49356996-49357091)
chr3 (61-179)||(21228317-21228435)
chr3 (57-179)||(21229361-21229483)
chr3 (8-98)||(37410192-37410279)
chr3 (56-179)||(51974436-51974558)
chr3 (56-179)||(12975037-12975159)
chr3 (56-179)||(49027159-49027281)
chr3 (56-178)||(20139755-20139876)
chr3 (56-161)||(48886572-48886676)
chr3 (56-180)||(33187852-33187975)
chr3 (56-178)||(51304767-51304888)
chr3 (56-179)||(26162279-26162401)
chr3 (56-178)||(43475624-43475745)
chr3 (74-178)||(42564144-42564248)
chr3 (56-179)||(36178222-36178344)
chr3 (74-178)||(6045100-6045204)
chr3 (74-178)||(10424424-10424528)
chr3 (56-116)||(15493530-15493590)
chr3 (56-138)||(31170006-31170087)
chr3 (56-111)||(47700694-47700749)
chr3 (56-124)||(11908299-11908366)
chr3 (75-149)||(30415220-30415294)
chr3 (56-118)||(35472057-35472118)
chr3 (56-137)||(35540309-35540389)
chr3 (56-116)||(51999809-51999868)
chr3 (77-119)||(6832880-6832922)
chr3 (75-149)||(27847819-27847893)
chr3 (74-124)||(50415566-50415616)
[»] chr8 (38 HSPs)
chr8 (8-180)||(8449740-8449912)
chr8 (8-180)||(35101591-35101763)
chr8 (8-180)||(36912762-36912934)
chr8 (7-180)||(26748664-26748837)
chr8 (8-180)||(13817245-13817417)
chr8 (8-180)||(17744772-17744944)
chr8 (8-179)||(5213992-5214163)
chr8 (8-171)||(34955039-34955202)
chr8 (24-180)||(5736223-5736379)
chr8 (8-137)||(43617934-43618063)
chr8 (77-179)||(27392671-27392773)
chr8 (8-116)||(18029052-18029160)
chr8 (8-111)||(26414466-26414569)
chr8 (8-99)||(4625231-4625319)
chr8 (56-178)||(13947670-13947791)
chr8 (8-74)||(42860996-42861062)
chr8 (74-179)||(15056780-15056885)
chr8 (74-178)||(13783949-13784053)
chr8 (8-76)||(26631858-26631926)
chr8 (8-76)||(30470524-30470592)
chr8 (74-178)||(43524008-43524112)
chr8 (56-161)||(30529389-30529493)
chr8 (56-178)||(1633159-1633280)
chr8 (56-178)||(38204971-38205092)
chr8 (191-466)||(43396008-43396288)
chr8 (8-108)||(17494310-17494409)
chr8 (56-130)||(29731938-29732011)
chr8 (9-137)||(231593-231721)
chr8 (9-137)||(708004-708132)
chr8 (9-137)||(745216-745344)
chr8 (9-137)||(869111-869239)
chr8 (74-137)||(26244877-26244940)
chr8 (56-129)||(44503519-44503591)
chr8 (75-149)||(1955010-1955084)
chr8 (75-116)||(23550011-23550052)
chr8 (243-320)||(40775169-40775246)
chr8 (81-137)||(40283855-40283911)
chr8 (56-116)||(44150168-44150227)
[»] chr4 (39 HSPs)
chr4 (8-180)||(46914244-46914416)
chr4 (7-180)||(2212049-2212222)
chr4 (8-180)||(21654557-21654729)
chr4 (8-180)||(36658636-36658808)
chr4 (8-179)||(53181186-53181357)
chr4 (8-174)||(19409682-19409848)
chr4 (8-174)||(47749782-47749948)
chr4 (8-137)||(27141915-27142044)
chr4 (8-111)||(7401442-7401545)
chr4 (8-95)||(10090033-10090120)
chr4 (56-178)||(23539423-23539544)
chr4 (56-178)||(33607216-33607337)
chr4 (8-76)||(40596467-40596535)
chr4 (56-178)||(27864113-27864234)
chr4 (56-178)||(28901154-28901275)
chr4 (56-178)||(28901314-28901435)
chr4 (74-178)||(28447444-28447548)
chr4 (74-178)||(34463307-34463411)
chr4 (56-178)||(53347430-53347554)
chr4 (56-178)||(35809599-35809720)
chr4 (74-178)||(16171653-16171757)
chr4 (56-178)||(13093905-13094026)
chr4 (56-129)||(39048804-39048877)
chr4 (74-178)||(3530027-3530131)
chr4 (74-178)||(8994953-8995057)
chr4 (74-161)||(34199027-34199114)
chr4 (56-179)||(34434284-34434405)
chr4 (74-178)||(13113731-13113835)
chr4 (74-178)||(33077628-33077732)
chr4 (27-74)||(31848516-31848563)
chr4 (74-137)||(48403661-48403724)
chr4 (110-178)||(33523637-33523705)
chr4 (74-178)||(56054457-56054556)
chr4 (74-157)||(18469113-18469196)
chr4 (74-137)||(19273164-19273227)
chr4 (75-149)||(3615008-3615082)
chr4 (56-129)||(17329647-17329719)
chr4 (56-116)||(4981931-4981990)
chr4 (76-156)||(36564262-36564342)
[»] chr2 (26 HSPs)
chr2 (8-180)||(8855193-8855365)
chr2 (8-180)||(37245848-37246020)
chr2 (8-179)||(12858086-12858257)
chr2 (8-179)||(30819372-30819543)
chr2 (8-180)||(31184992-31185164)
chr2 (8-179)||(9072675-9072846)
chr2 (8-180)||(31204718-31204890)
chr2 (8-180)||(2778854-2779026)
chr2 (8-180)||(36855110-36855281)
chr2 (8-180)||(39432464-39432637)
chr2 (8-180)||(926555-926727)
chr2 (8-137)||(4296357-4296486)
chr2 (56-179)||(6363597-6363719)
chr2 (74-178)||(4279301-4279405)
chr2 (56-178)||(7762923-7763044)
chr2 (56-178)||(17928948-17929069)
chr2 (74-179)||(5145135-5145240)
chr2 (56-161)||(36209203-36209307)
chr2 (56-128)||(16218480-16218552)
chr2 (74-178)||(22349670-22349774)
chr2 (8-57)||(1987459-1987508)
chr2 (56-124)||(17486104-17486171)
chr2 (104-178)||(39490335-39490409)
chr2 (56-124)||(1308422-1308489)
chr2 (75-149)||(7585293-7585367)
chr2 (76-156)||(14009592-14009671)
[»] chr7 (31 HSPs)
chr7 (8-180)||(5813472-5813644)
chr7 (8-179)||(22194423-22194594)
chr7 (8-180)||(30630341-30630513)
chr7 (8-168)||(33379491-33379652)
chr7 (18-180)||(25218008-25218169)
chr7 (7-127)||(35028525-35028646)
chr7 (8-118)||(24793686-24793796)
chr7 (8-99)||(37888656-37888747)
chr7 (56-179)||(1939676-1939799)
chr7 (56-178)||(32126994-32127115)
chr7 (56-178)||(32749160-32749281)
chr7 (56-178)||(40690532-40690653)
chr7 (56-178)||(26815332-26815453)
chr7 (56-161)||(114900-115004)
chr7 (74-178)||(40300703-40300807)
chr7 (74-178)||(42881802-42881906)
chr7 (56-175)||(43201680-43201799)
chr7 (56-178)||(45549131-45549251)
chr7 (74-178)||(22660081-22660185)
chr7 (254-333)||(48983553-48983631)
chr7 (27-74)||(48985189-48985236)
chr7 (56-137)||(33508353-33508433)
chr7 (56-137)||(39769976-39770056)
chr7 (56-148)||(33078558-33078649)
chr7 (56-124)||(38970311-38970378)
chr7 (56-99)||(35192857-35192900)
chr7 (75-149)||(36521734-36521808)
chr7 (56-116)||(20354528-20354587)
chr7 (56-124)||(37952039-37952106)
chr7 (74-124)||(38351876-38351926)
chr7 (77-129)||(47159183-47159235)
[»] chr5 (26 HSPs)
chr5 (8-180)||(25033382-25033554)
chr5 (7-179)||(31011783-31011955)
chr5 (8-180)||(7827309-7827480)
chr5 (8-179)||(4580204-4580375)
chr5 (14-180)||(21367782-21367948)
chr5 (8-180)||(41152580-41152752)
chr5 (8-116)||(41263689-41263797)
chr5 (8-98)||(8176074-8176163)
chr5 (7-118)||(25653073-25653191)
chr5 (56-161)||(25670549-25670653)
chr5 (56-178)||(32363200-32363321)
chr5 (56-161)||(27405927-27406031)
chr5 (56-178)||(42804527-42804648)
chr5 (74-179)||(30644808-30644913)
chr5 (56-178)||(13479337-13479458)
chr5 (56-180)||(36609813-36609937)
chr5 (74-178)||(29616260-29616364)
chr5 (56-138)||(177391-177473)
chr5 (56-129)||(15972845-15972918)
chr5 (56-124)||(4219159-4219226)
chr5 (56-124)||(39008770-39008837)
chr5 (74-137)||(39238794-39238857)
chr5 (75-149)||(40892029-40892103)
chr5 (56-124)||(23089796-23089863)
chr5 (75-149)||(27945859-27945933)
chr5 (75-149)||(32973147-32973221)
[»] chr1 (32 HSPs)
chr1 (8-180)||(31471382-31471554)
chr1 (8-179)||(45242247-45242418)
chr1 (8-180)||(52930398-52930570)
chr1 (8-166)||(37419930-37420088)
chr1 (8-180)||(17786439-17786611)
chr1 (8-166)||(27630046-27630204)
chr1 (8-137)||(37646142-37646271)
chr1 (8-118)||(8464822-8464932)
chr1 (7-125)||(44651324-44651442)
chr1 (8-125)||(44450971-44451088)
chr1 (72-178)||(18317587-18317693)
chr1 (56-178)||(29524109-29524230)
chr1 (56-178)||(51523475-51523596)
chr1 (56-178)||(45363687-45363808)
chr1 (56-178)||(17676095-17676215)
chr1 (56-161)||(36231141-36231244)
chr1 (56-128)||(48927129-48927201)
chr1 (56-179)||(8471421-8471542)
chr1 (56-178)||(51156425-51156546)
chr1 (56-179)||(33167420-33167545)
chr1 (7-63)||(20584523-20584579)
chr1 (74-178)||(48384947-48385051)
chr1 (56-178)||(47297332-47297453)
chr1 (56-178)||(48407568-48407689)
chr1 (74-179)||(31159630-31159735)
chr1 (56-129)||(36303341-36303414)
chr1 (56-129)||(48729681-48729754)
chr1 (27-74)||(643565-643612)
chr1 (56-133)||(45455646-45455722)
chr1 (58-99)||(38212635-38212676)
chr1 (75-149)||(2474883-2474957)
chr1 (72-133)||(39149394-39149457)
[»] chr6 (19 HSPs)
chr6 (8-179)||(6377185-6377356)
chr6 (8-179)||(17958053-17958224)
chr6 (8-180)||(29951781-29951953)
chr6 (8-179)||(634877-635048)
chr6 (7-166)||(34328608-34328767)
chr6 (8-137)||(2503582-2503711)
chr6 (11-128)||(198072-198189)
chr6 (56-179)||(7540410-7540533)
chr6 (8-118)||(32360006-32360115)
chr6 (56-178)||(24115247-24115369)
chr6 (56-178)||(12502108-12502229)
chr6 (56-178)||(18642454-18642575)
chr6 (74-178)||(8222311-8222415)
chr6 (75-178)||(34242619-34242719)
chr6 (56-178)||(12513222-12513346)
chr6 (56-178)||(26653897-26654018)
chr6 (56-178)||(26759866-26759987)
chr6 (75-149)||(34841714-34841788)
chr6 (74-131)||(10886485-10886542)
[»] scaffold0758 (1 HSPs)
scaffold0758 (8-180)||(6425-6595)
[»] scaffold0007 (1 HSPs)
scaffold0007 (56-176)||(166140-166260)
[»] scaffold1454 (1 HSPs)
scaffold1454 (56-178)||(478-599)
[»] scaffold0021 (1 HSPs)
scaffold0021 (56-178)||(109954-110075)
[»] scaffold0004 (1 HSPs)
scaffold0004 (56-178)||(106043-106164)
[»] scaffold1905 (2 HSPs)
scaffold1905 (56-178)||(127-248)
scaffold1905 (56-124)||(1175-1242)
[»] scaffold0559 (1 HSPs)
scaffold0559 (243-320)||(2043-2120)
[»] scaffold0012 (1 HSPs)
scaffold0012 (56-97)||(124317-124358)


Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 280
Target Start/End: Complemental strand, 49086503 - 49086231
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49086503 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 49086404  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttttgaatgactcatgatctttcaacatagc 207  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  49086403 acacccaaaattattctaattatccatttaactacgaaaatcccaacaattatccaaattcaaatcaatttttcaatgattcatgatctttcaacatagc 49086304  T
Q  208 tttataatataaacattctcctacgtgttggggatacattaggtgatatgttgaaggtggaccacttgatttc 280  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  49086303 tttataatataaacattctcctacgcgttggggatacattaggtgatatgttgaaggtgtaccacttgatttc 49086231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 474 - 680
Target Start/End: Complemental strand, 49084133 - 49083927
Alignment:
Q  474 ataaagaaacatgtaaggttccaatgtttgattttgtgaaggtttattcacctaaagagatagattttgccacaagggatgcaagttttccacatttcag 573  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49084133 ataaagaaacatgtaaggttccaatgtttgattctgtgaaggtttattcacctaaagagatagattttgccacaagggatgcaagttttccacatttcag 49084034  T
Q  574 gttttgatagcgtgacaaccgataaatctgaattccacaatgaagatctctctggtttatgagaatgattcataagcaaatcagtgagatattcatcaag 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49084033 gttttgatagcgtgacaaccgataaatctgaattccacaatgaagatctctttggtttatgagaatgattcataagcaaatcagtgagatattcatcaag 49083934  T
Q  674 attttgg 680  Q
    |||||||    
T  49083933 attttgg 49083927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 17469782 - 17469610
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17469782 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 17469683  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17469682 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 17469610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 47147639 - 47147467
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47147639 tttttcactatcttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 47147540  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47147539 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 47147467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 25787463 - 25787634
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25787463 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 25787562  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  25787563 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 25787634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 25829420 - 25829591
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25829420 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 25829519  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  25829520 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 25829591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 42598118 - 42598289
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42598118 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 42598217  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  42598218 acacccaaaatttttctaattacccatataactacgaaaatcccaacatttatccaaatccaaatcaatttt 42598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 33751678 - 33751506
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  33751678 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtgaaatggatcccaataataaccatttca 33751579  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  33751578 acacccaaaaattttctaattacccatttaactacgaaaatcccaacaattatccaaatccatatcaattttt 33751506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 51435992 - 51435821
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  51435992 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatctca 51435893  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  51435892 acacccaaaaattttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 51435821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 42602235 - 42602064
Alignment:
Q  9 ttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaa 108  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  42602235 ttttcactatcttcattttattattatctttatattagcaaactaagtgaagttttaatcttatttttagtgaaatagatcccaataataaccattttaa 42602136  T
Q  109 cacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  42602135 cacccaaaattattctaattacccatttaactatgaaaatcctaacaattatccaaatccaaatcaattttt 42602064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 5844726 - 5844884
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5844726 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttca 5844825  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaat 166  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5844826 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaat 5844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 50020364 - 50020192
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc- 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||     
T  50020364 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtaaaat-gatcccaataataatcatttca 50020266  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  50020265 aacacccaaaattattctaattacccatttaactacgaaaattccaacaattatccaaatccaaatcaattttt 50020192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 50034656 - 50034484
Alignment:
Q  8 tttttcactatcttcatcttattattatattt-ctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50034656 tttttcactatcttcatcttattattatcttttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataaccatttc 50034557  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  50034556 aacacccaaaattattctaactacccatttaactacgaaaatcccaacaa-tatccaaattcaaatcaattttt 50034484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 49822652 - 49822824
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  49822652 tttttcactatcttcgtattattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatctcaataataatcatttca 49822751  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  49822752 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttt 49822824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 30688609 - 30688759
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30688609 tttttcactatcttaatcttattattatttttctattagcaaactaagtgaagttttaatcttatttttaatgaaatggatcccaataataaccatttca 30688708  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaatt 158  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30688709 acacccaaaattattctaattacccatttaactacgaaaattccaacaatt 30688759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 33936537 - 33936381
Alignment:
Q  24 tcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattc 123  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||    
T  33936537 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaattttc 33936438  T
Q  124 taattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  33936437 taattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttt 33936381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 25450188 - 25450296
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25450188 tttttcactatcttcttcttattattatcttcctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttca 25450287  T
Q  108 acacccaaa 116  Q
    |||||||||    
T  25450288 acacccaaa 25450296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 49356996 - 49357091
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 102  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49356996 atttttcactatcctcatcttattattatctttctattcgcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 49357091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 21228435 - 21228317
Alignment:
Q  61 ttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattat 160  Q
    |||||||||| ||||||||||||||||||||||||||||   |||||||||||| |||| |||||||||| |||||| |||| |||||||||||||||||    
T  21228435 ttttaatcttctttttagtgaaatggatcccaataataattttttcaacacccataattcttctaattacgcatttagctaccaaaatcccaacaattat 21228336  T
Q  161 ctaaatccaaatcaatttt 179  Q
    | |||||||||||||||||    
T  21228335 caaaatccaaatcaatttt 21228317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 21229361 - 21229483
Alignment:
Q  57 gaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaa 156  Q
    |||||||||||||| |||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||  |||||| ||||||    
T  21229361 gaagttttaatcttctttttagtgaaatgaatcccaataataatcctttcaacacccaaaattcttctaattacccatttagctatcaaaatcgcaacaa 21229460  T
Q  157 ttatctaaatccaaatcaatttt 179  Q
    ||||  ||||| |||||||||||    
T  21229461 ttataaaaatcgaaatcaatttt 21229483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 37410192 - 37410279
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 98  Q
    |||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37410192 tttttcactatcttc---ttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 37410279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 51974558 - 51974436
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||||| || |||| |||||||||||||| |||||||| |||||||||||||| |||| || |||||||||||||| |||| |||||| |||||    
T  51974558 tgaagttttaatattcttttcagtgaaatggatcc-aataataatcatttcaacacccagaattcttttaattacccatttagctaccaaaatctcaaca 51974460  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| ||||||| |||||||||    
T  51974459 attatcaaaatccagatcaatttt 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 12975159 - 12975037
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  12975159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 12975061  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | | | |||||||||||    
T  12975060 attatcaacacctaaatcaatttt 12975037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 49027159 - 49027281
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||| |||||||| || |||||||||||||||| |||| |||| ||||||| |||| ||||||||||||    
T  49027159 tgaagttttagtctt-tgtttagtgaaatggatcctaataataatcaattcaacacccaaaatttttctgattatccatttagctaccaaaatcccaaca 49027257  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | | |||||||||||||    
T  49027258 attatcaacacccaaatcaatttt 49027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 20139876 - 20139755
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||||||  | |||||||||||||||| |||| |||||||||||| |||| |||||| |||||    
T  20139876 tgaagttttagtctt-tatttagtgaaatggatcccaataataattaattcaacacccaaaattcttctgattacccatttagctaccaaaatcgcaaca 20139778  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  20139777 attatcaacacccaaatcaattt 20139755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 48886572 - 48886676
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||| |||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  48886572 tgaagttttagtctt-tgtttagtgaaatggattccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 48886670  T
Q  156 attatc 161  Q
    ||||||    
T  48886671 attatc 48886676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 33187852 - 33187975
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || |||||||||||||||| |||| | ||||||| || |||| ||||||||||||    
T  33187852 tgaagttttagtctt-tatttagtgaaatggatcccaataaaaatcaattcaacacccaaaattcttctgactacccatctagctaccaaaatcccaaca 33187950  T
Q  156 attatctaaatccaaatcaattttt 180  Q
    |||||| | | ||||||||||||||    
T  33187951 attatcaacacccaaatcaattttt 33187975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 51304888 - 51304767
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||||| |||    
T  51304888 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatccctaca 51304790  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  51304789 attatcaacaaccaaatcaattt 51304767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 26162279 - 26162401
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || |||||| |||||| |||| |||||||||||  |||  ||||||||||||    
T  26162279 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacaccaaaaattcttctgattacccatttggctatcaaaatcccaaca 26162377  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | | |||||||||||||    
T  26162378 attatcaacacccaaatcaatttt 26162401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 43475745 - 43475624
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||| |||||| ||| || || |||||||| ||||||| |||| |||||||||||| |||| ||||||||||||    
T  43475745 tgaagttttagtctt-tatttagtgaaatgaatcccactaacaatcaattcaacactcaaaattcttctgattacccatttagctaccaaaatcccaaca 43475647  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  43475646 attatcaacacccaaatcaattt 43475624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 42564248 - 42564144
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| |||||||||||||||||| | | |||||||    
T  42564248 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatc 42564149  T
Q  174 aattt 178  Q
    |||||    
T  42564148 aattt 42564144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 36178222 - 36178344
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||| ||||||||| || ||||||||| |||||| |||| ||||  |||||| |||| ||||||||||||    
T  36178222 tgaagttttagtctt-tgtttagtaaaatggatctcaataataatcaattcaacacctaaaattcttctgattattcatttagctaccaaaatcccaaca 36178320  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | | |||||||||||||    
T  36178321 attatcaacagccaaatcaatttt 36178344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 6045100 - 6045204
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  6045100 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 6045199  T
Q  174 aattt 178  Q
    |||||    
T  6045200 aattt 6045204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 10424424 - 10424528
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || ||| |||||||||||| |||| ||||||  |||| |||| |||||||||||||||||| | | |||||||    
T  10424424 tttagtgaaatggatcccactaacaatcaattccacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatc 10424523  T
Q  174 aattt 178  Q
    |||||    
T  10424524 aattt 10424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 15493530 - 15493590
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  15493530 tgaagttttaatcttctttttagtgaaatagattccaataataatcatttcaacacccaaa 15493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 31170006 - 31170087
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaa 138  Q
    |||||||||| |||| | |||||||||||| ||||||||||||| || ||||||| |||||||| |||| |||||||||||||    
T  31170006 tgaagttttagtctt-tgtttagtgaaatgaatcccaataataatcaattcaacagccaaaattcttctgattacccatttaa 31170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 47700694 - 47700749
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacac 111  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||    
T  47700694 tgaagttttaaacttctttttagtgaaatggattccaataataatcatttcaacac 47700749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 11908366 - 11908299
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || ||||||||||| |||| ||||    
T  11908366 tgaagttttagtctt-tctttagtgaaatggatcccaataataatcaattcaacacccataattcttct 11908299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 30415220 - 30415294
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  30415220 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 30415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 35472057 - 35472118
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaat 118  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||    
T  35472057 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaat 35472118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 35540309 - 35540389
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    ||||||||||||||| | |||||||||||| ||| ||||||||| || ||||||| |||||||| || | ||||| ||||||    
T  35540309 tgaagttttaatctt-tatttagtgaaatgaatctcaataataatcaattcaacatccaaaattcttatgattactcattta 35540389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 51999809 - 51999868
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || ||||| |||||||    
T  51999809 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaatacccaaa 51999868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 6832922 - 6832880
Alignment:
Q  77 agtgaaatggatcccaataataaccatttcaacacccaaaatt 119  Q
    |||||||||||| |||||||||| || ||||||||||||||||    
T  6832922 agtgaaatggattccaataataatcaattcaacacccaaaatt 6832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 27847893 - 27847819
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||  ||||||| |||| |||| ||||||    
T  27847893 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttcagattacccttttagctaccaaaatc 27847819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 50415566 - 50415616
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| ||||    
T  50415566 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttct 50415616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 4e-83; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 8449740 - 8449912
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8449740 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 8449839  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8449840 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 8449912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 35101763 - 35101591
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35101763 tttttcaccatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 35101664  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35101663 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 35101591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 36912934 - 36912762
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36912934 tttttcactatattcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 36912835  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36912834 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatgaattttt 36912762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 26748664 - 26748837
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  26748664 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttttgtgacatggatcccaataataaccatttc 26748763  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| || ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  26748764 aacacccaaattttttctaattacccatttaactttgaaaatcccaacaattatccaaatccaaatcaattttt 26748837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 13817417 - 13817245
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13817417 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 13817318  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  13817317 acacccaaaatttttctaattatccatataactatgaaaatcccaacaattatccaaatccaaatcaattttt 13817245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 17744944 - 17744772
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  17744944 tttttcaatatcttaatcttattattatctttctattagcaaactaagtgaagttttaatctaatttttattgaaattgatcccaataataaccatttca 17744845  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17744844 acacccaaaattattctaataattcatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 17744772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 5214163 - 5213992
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||    
T  5214163 tttttcactatcttcatcttattattatctttctattagcaaattaagtgaagttttaatcttattttttgtgaaatcgatcccaataataaccatctca 5214064  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  5214063 acacccaaaaaaattttaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 5213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 34955039 - 34955202
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  34955039 tttttcactatcttattcttattattatctttctattagcaaactaagtgaagttttaatgttatttttagtgaaatggatcccaataacaaccatttca 34955138  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaa 171  Q
    |  | ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  34955139 atcctcaaaattattctagttacccatttaactacgaaaatcccaacaattatccaaatccaaa 34955202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 5736379 - 5736223
Alignment:
Q  24 tcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattc 123  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  5736379 tcttattattatctttctattaggaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataacaaccatttcaatccccaaaattattc 5736280  T
Q  124 taattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    || |||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  5736279 tagttacccatttaactacgaaaattccaacaattatcccaatccaaatcaattttt 5736223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 43617934 - 43618063
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43617934 tttttcactatcttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 43618033  T
Q  108 acacccaaaattattctaattacccattta 137  Q
    ||| ||||||||||||||||||||||||||    
T  43618034 acaaccaaaattattctaattacccattta 43618063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 27392773 - 27392671
Alignment:
Q  77 agtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaat 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  27392773 agtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactaccaaaatcccaacaattatcaaaatccaaatcaat 27392674  T
Q  177 ttt 179  Q
    |||    
T  27392673 ttt 27392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 18029052 - 18029160
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18029052 tttttcactatctttttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataaccatttca 18029151  T
Q  108 acacccaaa 116  Q
    |||||||||    
T  18029152 acacccaaa 18029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 26414569 - 26414466
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||    
T  26414569 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttcaacgaaatggatcccaataattaccatttca 26414470  T
Q  108 acac 111  Q
    ||||    
T  26414469 acac 26414466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 4625231 - 4625319
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 99  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4625231 tttttcactatcttc---ttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 4625319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 13947791 - 13947670
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || ||||||||| |||||| |||| |||||||||||| |||| ||||||||||||    
T  13947791 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacaccaaaaattcttctgattacccatttagctaccaaaatcccaaca 13947693  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  13947692 attatcaacaaccaaatcaattt 13947670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 42861062 - 42860996
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattt 74  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42861062 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattt 42860996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 15056885 - 15056780
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||| | | |||||||    
T  15056885 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattacccttttaactaccaaaatcccaacaattatcaacacccaaatc 15056786  T
Q  174 aatttt 179  Q
    ||||||    
T  15056785 aatttt 15056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 13783949 - 13784053
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    |||||||||||||||||||||||||| || ||||||||| |||||| |||| ||||| |||||| |||| |||||||||||||||||| | | |||||||    
T  13783949 tttagtgaaatggatcccaataataatcaattcaacacctaaaattcttctgattactcatttagctaccaaaatcccaacaattatcaacacccaaatc 13784048  T
Q  174 aattt 178  Q
    |||||    
T  13784049 aattt 13784053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 26631858 - 26631926
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttt 76  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26631858 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttt 26631926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 30470524 - 30470592
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttt 76  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  30470524 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttt 30470592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 43524008 - 43524112
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||| |||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | |||||||    
T  43524008 tttagtgaaatagatcccaataataatcaattcaacacccaaaattcttctgattatccatttacctaccaaaatcccaacaattatcaacacccaaatc 43524107  T
Q  174 aattt 178  Q
    |||||    
T  43524108 aattt 43524112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 30529389 - 30529493
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | || ||||||||||||||||||||||| || |||||||||||||||| |||| |||||| ||||| |||| ||||||||||||    
T  30529389 tgaagttttagtctt-tattaagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacctatttagctaccaaaatcccaaca 30529487  T
Q  156 attatc 161  Q
    ||||||    
T  30529488 attatc 30529493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 1633159 - 1633280
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||| ||||| || || ||||||||||||| |||| |||| ||||||| |||  ||||||||||||    
T  1633159 tgaagttttagtctt-tgtttagtgaaatggatcccaacaataatcaatttaacacccaaaattcttctgattatccatttagctatcaaaatcccaaca 1633257  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  1633258 attatcaacacccaaatcaattt 1633280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 38204971 - 38205092
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||| |||||||| || |||| || |||||||| || | |||| ||||||| |||| ||||||||||||    
T  38204971 tgaagttttagtctt-tatttagtgaaatggatcctaataataatcaattcaccatccaaaattcttttgattatccatttagctaccaaaatcccaaca 38205069  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  38205070 attatcaacacccaaatcaattt 38205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 191 - 466
Target Start/End: Original strand, 43396008 - 43396288
Alignment:
Q  191 tgatctttcaacatagctttataatataaacattctcctacgtgttggggatacattaggtgatatgttgaaggtggaccacttgatttctagtcaattt 290  Q
    |||||||||||   ||||||||||||| ||  |||||   | ||||||||| ||||||||| ||||||||||| | |||||||||| ||||||||||| |    
T  43396008 tgatctttcaatgaagctttataatatgaatgttctctggcatgttggggagacattaggtaatatgttgaag-tagaccacttgacttctagtcaatct 43396106  T
Q  291 tgtggccgatttgcccatatttgtgtgaaa-tatatatggacaataatcacactgcaaagtttactgtaagtacttttaagttttgttcttgatcttgaa 389  Q
     |||  ||| | || | ||||||||||||| || |||| ||||| || | || | |||| || ||| | |||  ||| ||||||||||||| ||||||||    
T  43396107 cgtgatcgactggctcgtatttgtgtgaaaatagatattgacaagaaactcattccaaaattcactatgagtgattt-aagttttgttcttaatcttgaa 43396205  T
Q  390 tatgaaagattacatgt---gtattttagttgtagaaaa---atagccccaaggttgtaatttgttcagagaacaagcttttt 466  Q
    |||||| ||||||||||   || |||| ||||| |||||   || ||| |||||||| ||||||| || | ||||||||||||    
T  43396206 tatgaaggattacatgttatgtgttttggttgtggaaaagatatggccacaaggttggaatttgtccatacaacaagcttttt 43396288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 17494310 - 17494409
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| |||||||||||||  ||||||||||   ||   ||||||||||| ||| |||||||||||||| ||||||||||||| |||||||    
T  17494310 tttttcactatcttaatcttattattatccttctattagctttcttt-tgaagttttaaacttctttttagtgaaatgaatcccaataataatcatttca 17494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 29732011 - 29731938
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattac 130  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| ||||||||||    
T  29732011 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctaattac 29731938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 231721 - 231593
Alignment:
Q  9 ttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaa 108  Q
    ||||||||||||| |||||||||||||  ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  231721 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 231622  T
Q  109 cacccaaaattattctaattacccattta 137  Q
    || | | |||| ||||||| | |||||||    
T  231621 catctagaattcttctaatcaaccattta 231593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 708132 - 708004
Alignment:
Q  9 ttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaa 108  Q
    ||||||||||||| |||||||||||||  ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  708132 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 708033  T
Q  109 cacccaaaattattctaattacccattta 137  Q
    || | | |||| ||||||| | |||||||    
T  708032 catctagaattcttctaatcaaccattta 708004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 745344 - 745216
Alignment:
Q  9 ttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaa 108  Q
    ||||||||||||| |||||||||||||  ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  745344 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 745245  T
Q  109 cacccaaaattattctaattacccattta 137  Q
    || | | |||| ||||||| | |||||||    
T  745244 catctagaattcttctaatcaaccattta 745216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 869239 - 869111
Alignment:
Q  9 ttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaa 108  Q
    ||||||||||||| |||||||||||||  ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  869239 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 869140  T
Q  109 cacccaaaattattctaattacccattta 137  Q
    || | | |||| ||||||| | |||||||    
T  869139 catctagaattcttctaatcaaccattta 869111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 26244940 - 26244877
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  26244940 tttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcattta 26244877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 44503591 - 44503519
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    |||||||||||| || | |||||||||||||||| ||||||||| || |||||||||||||||| |||| ||||    
T  44503591 tgaagttttaatatt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaaattcttctgatta 44503519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 1955010 - 1955084
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  1955010 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 1955084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 23550052 - 23550011
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  23550052 ttagtgaaatggatcccaataataatcaattcaacacccaaa 23550011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 40775169 - 40775246
Alignment:
Q  243 acattaggtgatatgttgaaggtggaccacttgatttctagtcaattttgtggccgatttgcccatatttgtgtgaaa 320  Q
    |||||| || ||||| ||||  ||||||||||||  |||||||||||| |||| |||||||| | |||||||||||||    
T  40775169 acattacgtaatatgctgaacatggaccacttgacatctagtcaatttcgtggtcgatttgcacgtatttgtgtgaaa 40775246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 40283911 - 40283855
Alignment:
Q  81 aaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||||||||||||||||  | |||||||||||||||| |||| ||||| ||||||    
T  40283911 aaatggatcccaataataattaattcaacacccaaaattcttctgattactcattta 40283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 44150227 - 44150168
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    |||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||    
T  44150227 tgaagttttagtctt-tgtttattgaaatggatcccaataataatcaattcaacacccaaa 44150168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 4e-83; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 46914244 - 46914416
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46914244 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 46914343  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46914344 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 46914416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 2212049 - 2212222
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2212049 atttttcactatcttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 2212148  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2212149 aacaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 2212222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 21654557 - 21654729
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21654557 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 21654656  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21654657 acacccaaaaattttctaattacccatataactacgaaaatcccaacaattatctaaatccaaatcaattttt 21654729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 36658808 - 36658636
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36658808 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcgcaataataaccatttca 36658709  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36658708 acacccaaaattattctaattactcatttaactacgaaaatccaaacaattatccaaatccaaatcaattttt 36658636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 53181186 - 53181357
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53181186 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 53181285  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  53181286 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 53181357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 19409848 - 19409682
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19409848 tttttcactatcttaatcttattattatctttctattagcaaactaagtgaagttttaattttatttttagtgaaatggatcccaataataaccatttca 19409749  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatca 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  19409748 acacccaaaattattctaattactcatttaactacgaaaatcccaacaattatccaaatccaaatca 19409682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 47749782 - 47749948
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  47749782 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtaaaatggatcccaataataactatttca 47749881  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatca 174  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47749882 acacccaaaaattttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatca 47749948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 27141915 - 27142044
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27141915 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttca 27142014  T
Q  108 acacccaaaattattctaattacccattta 137  Q
    ||| ||||||||||||||||||||||||||    
T  27142015 acaaccaaaattattctaattacccattta 27142044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 7401545 - 7401442
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7401545 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 7401446  T
Q  108 acac 111  Q
    ||||    
T  7401445 acac 7401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10090120 - 10090033
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaata 95  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10090120 tttttcactatcttcatcttattattatctttctattagcaaattaagtgaagttttaatcttattttttgtgaaatggatcccaata 10090033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 23539423 - 23539544
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  23539423 tgaagttttagtctt-tatttagtgaaatggatcccagtaacaatcaattcaacacccaaaattcttcttattacccatttaactaccaaaatcccaaca 23539521  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  23539522 attatcaacacccaaatcaattt 23539544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 33607337 - 33607216
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||| ||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  33607337 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 33607239  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | | ||||||||||    
T  33607238 attatcaacacctaaatcaattt 33607216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 40596467 - 40596535
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttt 76  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  40596467 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttt 40596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 27864234 - 27864113
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||||| |||    
T  27864234 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatccctaca 27864136  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  27864135 attatcaacagccaaatcaattt 27864113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 28901275 - 28901154
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || |||||||||||||||| || | |||||||||||| |||| ||||||| ||||    
T  28901275 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttatgattacccatttagctaccaaaatccaaaca 28901177  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  28901176 attatcaacacccaaatcaattt 28901154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 28901435 - 28901314
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||| ||| ||||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  28901435 tgaagttttagtctt-tatttagtgaaattgattccaataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 28901337  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  28901336 attatcaacacccaaatcaattt 28901314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 28447548 - 28447444
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    |||||||||||||||||||||||||| || |||||||||||||||| |||| |||||| ||||| |||| |||| ||||||||||||| |   |||||||    
T  28447548 tttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattaccaatttagctaccaaaaccccaacaattatcaacgcccaaatc 28447449  T
Q  174 aattt 178  Q
    |||||    
T  28447448 aattt 28447444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 34463307 - 34463411
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || ||||||||||||||||||||| ||||||  |||| |||| |||||||||||||||||| | | |||||||    
T  34463307 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattattctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatc 34463406  T
Q  174 aattt 178  Q
    |||||    
T  34463407 aattt 34463411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 53347430 - 53347554
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccat---ttcaacacccaaaattattctaattacccatttaactacgaaaatccca 152  Q
    |||||||||| |||| | ||||||||||||||||||||||||||  ||   |||||||||||||||| |||| |||| |||||||||||| |||||||||    
T  53347430 tgaagttttagtctt-tatttagtgaaatggatcccaataataataatcaattcaacacccaaaattcttctgattatccatttaactaccaaaatccca 53347528  T
Q  153 acaattatctaaatccaaatcaattt 178  Q
    ||||||||| | | | ||||||||||    
T  53347529 acaattatcaacaccaaaatcaattt 53347554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 35809720 - 35809599
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||| | ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||||| |||    
T  35809720 tgaagttttagtctt-tgtttaataaaatggatcccaataataatcaattcaacacccaaaatttttctgattactcatttagctaccaaaatccctaca 35809622  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  35809621 attatcaacagccaaatcaattt 35809599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 16171653 - 16171757
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||| |||| |||| ||||| |||||||||||| | | |||||||    
T  16171653 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattacccttttagctaccaaaataccaacaattatcaacacccaaatc 16171752  T
Q  174 aattt 178  Q
    |||||    
T  16171753 aattt 16171757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 13093905 - 13094026
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||| | ||||||||||||||||||| || |||||||||||||||| || | ||||| |||||| |||| |||||||| |||    
T  13093905 tgaagttttagtctt-tgtttaataaaatggatcccaataataatcaattcaacacccaaaattcttttgattactcatttagctaccaaaatccctaca 13094003  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  13094004 attatcaacagccaaatcaattt 13094026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 39048804 - 39048877
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||    
T  39048804 tgaagttttaaacttctttttagtgaaatggatctcaataataatcatttcaacacccagaattcttctaatta 39048877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 3530027 - 3530131
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  3530027 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 3530126  T
Q  174 aattt 178  Q
    |||||    
T  3530127 aattt 3530131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 8995057 - 8994953
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  8995057 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 8994958  T
Q  174 aattt 178  Q
    |||||    
T  8994957 aattt 8994953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 34199027 - 34199114
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatc 161  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||||||||||||||    
T  34199027 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatc 34199114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 34434284 - 34434405
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| ||||  ||||  |||||    
T  34434284 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctac-caaatttcaaca 34434381  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | |  ||||||||||||    
T  34434382 attatcaacacacaaatcaatttt 34434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 13113835 - 13113731
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| || | ||||||  |||| |||| |||||||||||||||||| | |  ||||||    
T  13113835 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttatgattaccattttagctaccaaaatcccaacaattatcaacactcaaatc 13113736  T
Q  174 aattt 178  Q
    |||||    
T  13113735 aattt 13113731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 33077628 - 33077732
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    |||||||||||||||| || ||| || || ||||||||| ||| || |||| ||||| | |||| |||| |||||||||||||||||| | | |||||||    
T  33077628 tttagtgaaatggatcacactaacaatcaattcaacaccaaaattttttctgattacacttttagctaccaaaatcccaacaattatcaacacccaaatc 33077727  T
Q  174 aattt 178  Q
    |||||    
T  33077728 aattt 33077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 31848516 - 31848563
Alignment:
Q  27 tattattatatttctattagcaaactaagtgaagttttaatcttattt 74  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  31848516 tattattatctttcgattagcaaactaagtgaagttttaatcttattt 31848563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 48403661 - 48403724
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||| ||||||||||||||||||| || ||||||| |||||||| |||| ||||||||||||    
T  48403661 tttagtaaaatggatcccaataataatcaattcaacatccaaaattcttctgattacccattta 48403724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 33523705 - 33523637
Alignment:
Q  110 acccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattt 178  Q
    |||||||||| |||| |||||||||||| |||| |||||||||||||||||| | | | ||||||||||    
T  33523705 acccaaaattcttctgattacccatttagctaccaaaatcccaacaattatcaacacctaaatcaattt 33523637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 56054556 - 56054457
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||     | |||||||||||| |||| ||||| |||||||||||  | | |||||||    
T  56054556 tttagtgaaatggatcccactaacaatcaattcaacacccaaaat-----tcattacccatttagctaccaaaattccaacaattatgaacacccaaatc 56054462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 18469113 - 18469196
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaat 157  Q
    ||||||||||||||||  |||||||| || ||||||||| |||||| |||| | |||| ||||| |||  ||||||||||||||    
T  18469113 tttagtgaaatggatctgaataataatcaattcaacaccaaaaattcttctgaataccaatttagctatcaaaatcccaacaat 18469196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 19273227 - 19273164
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  19273227 tttagtaaaatgaatcccaataataatcaattcaacacccaaaattcttctgattactcattta 19273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 3615008 - 3615082
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  3615008 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 3615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 17329647 - 17329719
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    |||||||||| |||| | |||||||||||| |||| |||||||| || |||||||||||||||| |||| ||||    
T  17329647 tgaagttttagtctt-tgtttagtgaaatgaatccaaataataatcaattcaacacccaaaattcttctgatta 17329719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 4981990 - 4981931
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||    
T  4981990 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 4981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 36564262 - 36564342
Alignment:
Q  76 tagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaa 156  Q
    |||||| |||||||| || ||||||| ||| | ||||||||||| | |||||||||| || |||||   ||||||||||||    
T  36564262 tagtgagatggatcctaacaataacccttttatcacccaaaattctactaattaccctttcaactatccaaatcccaacaa 36564342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 4e-83; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 8855365 - 8855193
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8855365 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 8855266  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8855265 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 8855193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 37246020 - 37245848
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37246020 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 37245921  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  37245920 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatgaattttt 37245848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 12858257 - 12858086
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12858257 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 12858158  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12858157 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 12858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 30819372 - 30819543
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30819372 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 30819471  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  30819472 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 30819543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 31184992 - 31185164
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31184992 tttttcactatcttaatcttattattatctttctattagaaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 31185091  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  31185092 acacccaaaattattctaattacccatttaactaataaaatcccaacaattatccaaatccaaatcaattttt 31185164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 9072675 - 9072846
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  9072675 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttgttgtgaaatggatcccaataataaccatttca 9072774  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  9072775 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 9072846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 31204718 - 31204890
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31204718 tttttcactatcttaatcttattattatctttctattagtaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 31204817  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  31204818 acaccaaaaattattctaattacccatttaactacgaaaatcccaacaattatcctcatccaaatcaattttt 31204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 2778854 - 2779026
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  2778854 tttttcactatctccatcttattattatttttctattaccaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataatcatttca 2778953  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2778954 acacccaaaattattctaattatccatttaactacgaaaatcccaacaattatccaaatcgaaatcaattttt 2779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 36855110 - 36855281
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  36855110 tttttcactatcttcatcttattattatctttctattagcaaactaagtga-gttttaatcttatttttagtgaaatggatcccaatagtaatcatttca 36855208  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  36855209 acacccaaaatttttctaattacccatttaattacgaaaatcccaacaattatccaaatccaattcaattttt 36855281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 39432464 - 39432637
Alignment:
Q  8 tttttcactatcttcatctt-attattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  39432464 tttttcactatcttcatctttattattatctttctattagcaaactaagtgaagttttaatcttactttttgtaaaatggatcccaataataaccatttc 39432563  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  39432564 aacacccaaaatttttctaattacccctttaactacgaaaatcgcaacaattatccaaatccaaatcaattttt 39432637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 926555 - 926727
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||    
T  926555 tttttcactatcttaatcttattattatctttctattagcaaactaagtgaagttttaatattatttttagtgaaatgaatctcaataataacaatttca 926654  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  926655 acacccaaaattattctaatttctcatttaactgcgaaaatctcaacaattatccaaatccaaatcaattttt 926727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 4296357 - 4296486
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4296357 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 4296456  T
Q  108 acacccaaaattattctaattacccattta 137  Q
    ||| ||||||||||||||||||||||||||    
T  4296457 acaaccaaaattattctaattacccattta 4296486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 6363719 - 6363597
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  6363719 tgaagttttagtctt-tatttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 6363621  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | |  ||||||||||||    
T  6363620 attatcaacacgcaaatcaatttt 6363597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 4279405 - 4279301
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||| || ||||||||| || ||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||| | | |||||||    
T  4279405 tttagtgaaatggctcacaataataatcaattcaacacccaaaattattctgattacccatttagctaccaaaatcccaaccattatcaacacccaaatc 4279306  T
Q  174 aattt 178  Q
    |||||    
T  4279305 aattt 4279301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 7762923 - 7763044
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| |||||  |||||    
T  7762923 tgaagttttagtctt-tgtttcgtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatttcaaca 7763021  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  7763022 attatcaacacccaaatcaattt 7763044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 17928948 - 17929069
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||| |||||| |||||    
T  17928948 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctaccaaaatctcaaca 17929046  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | |  |||||||||||    
T  17929047 attatcaacacacaaatcaattt 17929069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 5145135 - 5145240
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||| || |||||||| ||||| |||| ||||||| |||||||||| | | |||||||    
T  5145135 tttagtgaaatagatctcaataataatcaattcaacacccaaaatttttttaattacctatttagctaccaaaatccaaacaattatcaacacccaaatc 5145234  T
Q  174 aatttt 179  Q
    ||||||    
T  5145235 aatttt 5145240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 36209203 - 36209307
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||   |||||||||||    
T  36209203 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctaactaaatcccaaca 36209301  T
Q  156 attatc 161  Q
    ||||||    
T  36209302 attatc 36209307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 16218480 - 16218552
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatt 128  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||| |||| ||||||||    
T  16218480 tgaagttttaatcttctttttagtgaattggatcccaataataatcctttcaacacccataattcttctaatt 16218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 22349670 - 22349774
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  22349670 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 22349769  T
Q  174 aattt 178  Q
    |||||    
T  22349770 aattt 22349774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 1987508 - 1987459
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtg 57  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1987508 tttttcactatcttcatcttattattatctttctattagcaaactaagtg 1987459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 17486171 - 17486104
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  17486171 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 17486104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 39490409 - 39490335
Alignment:
Q  104 ttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattt 178  Q
    |||||||||||||||| |||| ||||| |||||| |||| |||||||||||||||||| | |  |||||||||||    
T  39490409 ttcaacacccaaaattcttctgattactcatttagctaccaaaatcccaacaattatcaacactcaaatcaattt 39490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 1308422 - 1308489
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||| ||||||||||||| || |||||||||||||||| ||||    
T  1308422 tgaagttttagtctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaaattcttct 1308489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 7585293 - 7585367
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  7585293 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 7585367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 14009671 - 14009592
Alignment:
Q  76 tagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaa 156  Q
    |||| ||||||||||||| ||||| ||||| ||||||||||||| | ||||||| || || ||||||  ||||||||||||    
T  14009671 tagtaaaatggatcccaacaataaacattttaacacccaaaattctactaatta-cctttcaactacccaaatcccaacaa 14009592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 1e-80; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 5813644 - 5813472
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5813644 tttttcactatctttttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 5813545  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5813544 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 5813472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 22194594 - 22194423
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22194594 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 22194495  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  22194494 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 22194423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 30630341 - 30630513
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30630341 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 30630440  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  30630441 acacccaaaaattttctaattacccatataactacgaaaatcccaacaattatccaagtccaaatcaattttt 30630513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 33379652 - 33379491
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagtttt-aatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  33379652 tttttcactatcttcatcttattattatctttctagtagcaaactaagtgaagtttttaatcttatttttagtgaaatggatcccaataataacaatttc 33379553  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatcc 168  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  33379552 aacacccaaaatttttctaattacccatctaactacgaaaatctcaacaattatccaaatcc 33379491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 25218008 - 25218169
Alignment:
Q  18 tcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaa 117  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  25218008 tcttcatcttattattatctttctattag-aaactaagtaaagttttaatattattttttgtgaaatggatcccaataataatcatttcaacacccaaaa 25218106  T
Q  118 ttattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25218107 tttttctaattacccatttaactacgaaaatcccaacaattattcaaatccaaatcaattttt 25218169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 35028525 - 35028646
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatccc-aataataaccattt 105  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35028525 atttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaaataataaccattt 35028624  T
Q  106 caacacccaaaattattctaat 127  Q
    ||||| ||||||||||||||||    
T  35028625 caacaaccaaaattattctaat 35028646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 24793796 - 24793686
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793796 tttttcactatgttaatcttattattatctttctattagcaagctaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 24793697  T
Q  108 acacccaaaat 118  Q
    |||||||||||    
T  24793696 acacccaaaat 24793686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 37888747 - 37888656
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 99  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37888747 tttttcactatcttcatctaattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatgtatcccaataataa 37888656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 1939676 - 1939799
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||| |||||||  ||| ||||||||||||    
T  1939676 tgaagtgttaatcttctttttagtgaaatggatcccaataataatcatttcaacactcagaattcttctaattatccatttagttaccaaaatcccaaca 1939775  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| ||||| |||||||||||    
T  1939776 attatcaaaatcgaaatcaatttt 1939799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 32126994 - 32127115
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||  |||  ||||||||||||    
T  32126994 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttggctatcaaaatcccaaca 32127092  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  32127093 attatcaacacccaaatcaattt 32127115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 32749281 - 32749160
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  32749281 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 32749183  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  32749182 attatcaacacccaaatcaattt 32749160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 40690653 - 40690532
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  40690653 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 40690555  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  40690554 attatcaacacccaaatcaattt 40690532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 26815453 - 26815332
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| ||||| |||||  |||  ||||||||||||    
T  26815453 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattactcatttggctatcaaaatcccaaca 26815355  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  26815354 attatcaacacccaaatcaattt 26815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 115004 - 114900
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || ||||||| | |||||| |||| |||| ||||||| |||| ||||||||||||    
T  115004 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacatctaaaattcttctgattagccatttagctaccaaaatcccaaca 114906  T
Q  156 attatc 161  Q
    ||||||    
T  114905 attatc 114900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 40300703 - 40300807
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    |||||||||||||||| || ||| || || |||||||||||||||| |||| ||||| | |||| |||| |||||||||||||||||| | | |||||||    
T  40300703 tttagtgaaatggatcacactaacaatcaattcaacacccaaaattcttctgattactcttttagctaccaaaatcccaacaattatcaacacccaaatc 40300802  T
Q  174 aattt 178  Q
    |||||    
T  40300803 aattt 40300807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 42881906 - 42881802
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  42881906 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 42881807  T
Q  174 aattt 178  Q
    |||||    
T  42881806 aattt 42881802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 43201680 - 43201799
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| || | |||||||||||||||||||||||||||| ||||| ||||| || |||| |||| ||||  |||||| |||| |||||||||       
T  43201680 tgaagttttagtcatttttttagtgaaatggatcccaataataatcatttgaacactcagaattcttctgattattcatttagctaccaaaatcccacag 43201779  T
Q  156 attatctaaatccaaatcaa 175  Q
    |||||| | |||||||||||    
T  43201780 attatccacatccaaatcaa 43201799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 45549131 - 45549251
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||||||||||||| || ||||| |||||||||| |||| ||||  |||||| |||| |||||||| |||    
T  45549131 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaa-acccaaaattcttctgattaatcatttagctaccaaaatccctaca 45549228  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  45549229 attatcaacagccaaatcaattt 45549251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 22660185 - 22660081
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || ||||||| |||||||| |||| ||||||| |||| |||| |||||  ||||||||||| | | |||||||    
T  22660185 tttagtgaaatggatcccactaacaatcaattcaacatccaaaattcttctgattacccttttagctaccaaaatttcaacaattatcaacacccaaatc 22660086  T
Q  174 aattt 178  Q
    |||||    
T  22660085 aattt 22660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 48983553 - 48983631
Alignment:
Q  254 tatgttgaaggtggaccacttgatttctagtcaattttgtggccgatttgcccatatttgtgtgaaatatatatggacaa 333  Q
    ||||||||||||||||| ||||| ||||||||||| |  |||| ||||||||||||||||||||||| ||||| ||||||    
T  48983553 tatgttgaaggtggaccccttgacttctagtcaatctcctggctgatttgcccatatttgtgtgaaa-atatacggacaa 48983631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 48985236 - 48985189
Alignment:
Q  27 tattattatatttctattagcaaactaagtgaagttttaatcttattt 74  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  48985236 tattattatctttctattagtaaactaagtgaagttttaatcttattt 48985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 33508353 - 33508433
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || |||||||||||||||| |||| || | |||||||    
T  33508353 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttctgatcatccattta 33508433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 39770056 - 39769976
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||||||| |||| | ||||||||||||||| | |||||||| || |||||||||||||||| |||| |||| |||||||    
T  39770056 tgaagttttagtctt-tgtttagtgaaatggattcaaataataatcaattcaacacccaaaattcttctgattatccattta 39769976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 33078558 - 33078649
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaat 148  Q
    |||||||||| |||| | ||||||||||||||||||| | | || || |||||||||||||||| |||| ||||| |||||| |||| |||||    
T  33078558 tgaagttttagtctt-tatttagtgaaatggatcccactgacaatcaattcaacacccaaaattcttctgattactcatttagctaccaaaat 33078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 38970378 - 38970311
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  38970378 tgaagttttagtctt-tatttagtgaaatggatctcaataataatcaattcaacacccaaaattcttct 38970311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 35192857 - 35192900
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataa 99  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  35192857 tgaagttttaaacttctttttagtgaaatggatcccaataataa 35192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 36521808 - 36521734
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  36521808 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 36521734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 20354587 - 20354528
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaa 116  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||| ||||    
T  20354587 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacactcaaa 20354528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 37952106 - 37952039
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | ||||||||||||||||||| ||| || || |||||||||||||||| ||||    
T  37952106 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttct 37952039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 38351926 - 38351876
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||| ||||||||||||||||||||| || |||||||| ||||||| ||||    
T  38351926 tttaatgaaatggatcccaataataatcaattcaacacacaaaattcttct 38351876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 47159183 - 47159235
Alignment:
Q  77 agtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    |||||||||||||||| ||| || || |||||||||||||||| |||| ||||    
T  47159183 agtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgatta 47159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 1e-80; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 25033554 - 25033382
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25033554 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttctagtgaaatggatcccaataataaccatttca 25033455  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25033454 acacccaaaaattttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 25033382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 31011783 - 31011955
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31011783 atttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttc 31011882  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  31011883 aacacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 31011955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 7827480 - 7827309
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  7827480 tttttcactatcttaatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatg-atctcaataataatcatttca 7827382  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7827381 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 7827309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 4580375 - 4580204
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4580375 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 4580276  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  4580275 acacccaaaaattttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 4580204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 21367948 - 21367782
Alignment:
Q  14 actatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaccc 113  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21367948 actatcttaatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaccc 21367849  T
Q  114 aaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  21367848 aaaattattctaattacccatttaactattaaattcccaacaattatccaaatccaaatcaattttt 21367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 41152580 - 41152752
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  41152580 tttttcactatcttcatcttattattatccttctattagcaaactaagtgaaattttaatattatttttagtgaaatggatctcaataataaccatttca 41152679  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  41152680 acacctaaaattattctaattacccatttaactacggaaattccaacaattatccaaatccaaatcaattttt 41152752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 41263797 - 41263689
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41263797 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataaccatttca 41263698  T
Q  108 acacccaaa 116  Q
    |||||||||    
T  41263697 acacccaaa 41263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 8176074 - 8176163
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 98  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8176074 tttttcactatcttcttcttattattatctttc-attagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 8176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 25653191 - 25653073
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatc---ttatttttagtgaaatggatccca----ataataa 99  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||   || |||||||||||||||||||||    |||||||    
T  25653191 atttttcactattttaatcttattattatctttctattagcaaactaagtgaagttttaatctttttttttttagtgaaatggatcccaatatataataa 25653092  T
Q  100 ccatttcaacacccaaaat 118  Q
    ||||||||| |||||||||    
T  25653091 ccatttcaagacccaaaat 25653073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 25670549 - 25670653
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  25670549 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 25670647  T
Q  156 attatc 161  Q
    ||||||    
T  25670648 attatc 25670653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 32363200 - 32363321
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || ||||||||| |||||| |||| |||||||||||| |||| ||||||||||||    
T  32363200 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacctaaaattcttctgattacccatttagctaccaaaatcccaaca 32363298  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | | ||||||||||    
T  32363299 attatcaacacctaaatcaattt 32363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 27405927 - 27406031
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  27405927 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 27406025  T
Q  156 attatc 161  Q
    ||||||    
T  27406026 attatc 27406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 42804527 - 42804648
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||| || ||| || || |||||||||||||||| |||| ||||||| ||||||||| ||||||||||||    
T  42804527 tgaagttttagtctt-tatttagtgaaatggatctcactaacaatcaattcaacacccaaaattcttctgattacccttttaactaccaaaatcccaaca 42804625  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  42804626 attatcaacacccaaatcaattt 42804648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 30644808 - 30644913
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||| ||||||||||||||||  || || |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||| | | |||||||    
T  30644808 tttagggaaatggatcccaataccaatcaattcaacacccaaaattcttctaattacccatttagctaccaaaattccaacaattatcaacacccaaatc 30644907  T
Q  174 aatttt 179  Q
    ||||||    
T  30644908 aatttt 30644913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 13479337 - 13479458
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||| ||| |||    
T  13479337 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaacccctaca 13479435  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  13479436 attatcaacagccaaatcaattt 13479458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 36609937 - 36609813
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | |||||||  | | |||  ||||||||| ||||||| |||  ||| ||||||||    
T  36609937 tgaagttttaatcttctttttagtgaaatggattccaataataatcctttcaacgtctagaatacttctaattatccatttagctatcaaactcccaaca 36609838  T
Q  156 attatctaaatccaaatcaattttt 180  Q
    |||||| |||| ||||| |||||||    
T  36609837 attatcaaaattcaaattaattttt 36609813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 29616260 - 29616364
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| | ||||  |||| |||| |||||||||||||||||| | | |||||||    
T  29616260 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgactaccattttagctaccaaaatcccaacaattatcaacacccaaatc 29616359  T
Q  174 aattt 178  Q
    |||||    
T  29616360 aattt 29616364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 177473 - 177391
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaa 138  Q
    ||||||||||||||| ||||| || |||||||||||||||||||  ||||||||||||| |||| ||||||||| | ||||||    
T  177473 tgaagttttaatcttctttttggtaaaatggatcccaataataataatttcaacacccataattcttctaattatcaatttaa 177391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 15972918 - 15972845
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||| |||||||||||| | |||| |||||||||    
T  15972918 tgaagttttaaacttctttttagtgaaatggatttcaataataatcatttcaacacctagaattcttctaatta 15972845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 4219159 - 4219226
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  4219159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 4219226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 39008837 - 39008770
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  39008837 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 39008770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 39238857 - 39238794
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccattta 137  Q
    |||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  39238857 tttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcattta 39238794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 40892103 - 40892029
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| ||||||||| ||||||    
T  40892103 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttaactaccaaaatc 40892029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 23089863 - 23089796
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||| ||||||||||||||||||||| || |||||||||||||||| ||||    
T  23089863 tgaagttttagtctt-tgtttattgaaatggatcccaataataatcaattcaacacccaaaattcttct 23089796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 27945933 - 27945859
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  27945933 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 27945859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 32973147 - 32973221
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  32973147 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 32973221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 1e-80; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 31471554 - 31471382
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31471554 tttttcactatcttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 31471455  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31471454 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 31471382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 45242418 - 45242247
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45242418 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 45242319  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  45242318 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 45242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 52930398 - 52930570
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  52930398 tttttcattatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttttgtgaaatgtatcccaataataaccatttca 52930497  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52930498 acacccaaaatttttctaattatccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 52930570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 37419930 - 37420088
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37419930 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttca 37420029  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaat 166  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37420030 acaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaat 37420088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 17786611 - 17786439
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  17786611 tttttcactatcttcatcttattattatctttctattagcaaattaagtgaaattttaatcttattttttgtgaaatggatccaaataataaccatttca 17786512  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  17786511 acacccaaaatttttttaattacccatttaactatgaaaatcccaacaattatccaaatgcaaatcaattttt 17786439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 27630046 - 27630204
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27630046 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttca 27630145  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaat 166  Q
    |||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27630146 acaaacaaaattattctaattacctatttaactacgaaaatcccaacaattatccaaat 27630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 37646142 - 37646271
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37646142 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 37646241  T
Q  108 acacccaaaattattctaattacccattta 137  Q
    ||| ||||||||||||||||||||||||||    
T  37646242 acaaccaaaattattctaattacccattta 37646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 8464932 - 8464822
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8464932 tttttcactatcttaatcttattattatctttctattagcaaactaagtgaagttttaatcttttttttagtgaaatggatcccaataataaccatttca 8464833  T
Q  108 acacccaaaat 118  Q
    | |||||||||    
T  8464832 agacccaaaat 8464822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 44651442 - 44651324
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  44651442 atttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaagcttatttttagtgaaatggatcccaataacaaccatttc 44651343  T
Q  107 aacacccaaaattattcta 125  Q
    ||  | |||||||||||||    
T  44651342 aatcctcaaaattattcta 44651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 44450971 - 44451088
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  44450971 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaagcttatttttagtgaaatggatcccaataacaaccatttca 44451070  T
Q  108 acacccaaaattattcta 125  Q
    |  | |||||||||||||    
T  44451071 atcctcaaaattattcta 44451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 18317587 - 18317693
Alignment:
Q  72 tttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaa 171  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||| |||| |||||||||||| |||| |||||||||||||||||| | |||||||    
T  18317587 tttttagtgaaatggatcccaataataatcatttaaacacccagaattcttctgattacccatttagctaccaaaatcccaacaattatcaacatccaaa 18317686  T
Q  172 tcaattt 178  Q
    |||||||    
T  18317687 tcaattt 18317693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 29524230 - 29524109
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    ||||||||||||||| | |||||||||||| ||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  29524230 tgaagttttaatctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 29524132  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  29524131 attatcaacacccaaatcaattt 29524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 51523596 - 51523475
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| || | |||||||||||| |||| ||||||||||||    
T  51523596 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaaatttttatgattacccatttagctaccaaaatcccaaca 51523498  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  51523497 attatcaatacccaaatcaattt 51523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 45363808 - 45363687
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||||||  | |||||||||||||||| |||  |||||||||||| |||| ||||||||||||    
T  45363808 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataaattcaacacccaaaattcttcagattacccatttagctaccaaaatcccaaca 45363710  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  45363709 attatcaacacccaaatcaattt 45363687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 17676095 - 17676215
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||| ||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  17676095 tgaagttttagtctt-tatttagtgaaatggatcc-aataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 17676192  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  17676193 attatcaacacccaaatcaattt 17676215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 36231244 - 36231141
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||| | |||||||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  36231244 tgaagttttagtctt-tatttagtgaaatggatcccaataacaac-agttcaacacccaaaattcttcaaattacccatttagctaccaaaatcccaaca 36231147  T
Q  156 attatc 161  Q
    ||||||    
T  36231146 attatc 36231141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 48927201 - 48927129
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatt 128  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  48927201 tgaagttttaatattctttttagtgaaatggatcccaataataatcatttcaacacccaaaattcttctaatt 48927129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 8471542 - 8471421
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||| ||||| || || |||||||||||||||| ||||||||||||||||| |||| |||| ||||| |    
T  8471542 tgaagttttagtctt-tatttagtgaaatggatcc-aataacaatcaattcaacacccaaaattcttctaattacccatttagctaccaaaaccccaata 8471445  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| | | |||||||||||||    
T  8471444 attatcaacacccaaatcaatttt 8471421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 51156425 - 51156546
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||| ||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  51156425 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 51156523  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  51156524 attatcaacacccaaatcaattt 51156546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 33167545 - 33167420
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccat---ttcaacacccaaaattattctaattacccatttaactacgaaaatccca 152  Q
    |||||||||| |||| | ||||||||||||||||||||||||||  ||   |||||||||||||||| || | |||||||||||| ||||  ||||||||    
T  33167545 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataatcaattcaacacccaaaattcttttgattacccatttagctaccgaaatccca 33167447  T
Q  153 acaattatctaaatccaaatcaatttt 179  Q
    ||||||||| | | |||||||||||||    
T  33167446 acaattatcaacacccaaatcaatttt 33167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 20584523 - 20584579
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttt 63  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20584523 atttttcactatcttaatcttattattatttttctattagcaaactaagtgaagttt 20584579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 48384947 - 48385051
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||    
T  48384947 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatc 48385046  T
Q  174 aattt 178  Q
    |||||    
T  48385047 aattt 48385051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 47297332 - 47297453
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | || ||||||||||||| |||||| || || |||||||||||||||| |||| ||||| |||||  |||| ||||||||||||    
T  47297332 tgaagttttagtctt-tattcagtgaaatggatctcaataacaatcaattcaacacccaaaattcttctgattactcatttggctaccaaaatcccaaca 47297430  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | |  |||||||||||    
T  47297431 attatcaacactcaaatcaattt 47297453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 48407689 - 48407568
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||| || ||||| ||| ||  | |||||||||||||| | |||| ||||||| ||||||||| ||||||||||||    
T  48407689 tgaagttttagtctt-tatttagtgaaacgggtcccactaacaattaattcaacacccaaaaattttctgattacccttttaactaccaaaatcccaaca 48407591  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  48407590 attatcaacacccaaatcaattt 48407568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 31159735 - 31159630
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||| ||| || || |||||||||||||||| |||  |||| |  |||| |||| |||||||||||||||||| | | |||||||    
T  31159735 tttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttccgattatcattttagctaccaaaatcccaacaattatcaacacccaaatc 31159636  T
Q  174 aatttt 179  Q
    ||||||    
T  31159635 aatttt 31159630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 36303414 - 36303341
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| | | |||| |||||||||    
T  36303414 tgaagttttaaacttctttttagtgaaatggatcccaataataatcatttcaacatctagaattcttctaatta 36303341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 48729754 - 48729681
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaatta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| | | |||| |||||||||    
T  48729754 tgaagttttaaacttctttttagtgaaatggatcccaataataatcatttcaacatctagaattcttctaatta 48729681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 643565 - 643612
Alignment:
Q  27 tattattatatttctattagcaaactaagtgaagttttaatcttattt 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  643565 tattattatctttctattagcaaactaagtgaagttttaatcttattt 643612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 45455646 - 45455722
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattaccca 133  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| || | ||||||||    
T  45455646 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttttgattaccca 45455722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 38212676 - 38212635
Alignment:
Q  58 aagttttaatcttatttttagtgaaatggatcccaataataa 99  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  38212676 aagttttaatcttattttaagtgaaatggatcccaataataa 38212635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 2474883 - 2474957
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  2474883 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 2474957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 39149457 - 39149394
Alignment:
Q  72 tttttagtgaaatggatcccaataataaccattt--caacacccaaaattattctaattaccca 133  Q
    |||||||| |||||||| | |||| ||| |||||  ||||||||||||||||||||||||||||    
T  39149457 tttttagtaaaatggattcgaatattaatcatttttcaacacccaaaattattctaattaccca 39149394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 4e-80; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 6377185 - 6377356
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6377185 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 6377284  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  6377285 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 6377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 17958053 - 17958224
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17958053 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 17958152  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17958153 acacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 17958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 29951781 - 29951953
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  29951781 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataactatttca 29951880  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  29951881 acacccaaaaattttctaattacccatataactacgaaaatcccaacaattatctaattccaaatcaattttt 29951953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 635048 - 634877
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  635048 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttca 634949  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaatttt 179  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||| |||||||||||||||||    
T  634948 acacccaaaatttttctaattacccataaaaatacgaaaatcccaacaattatccaaatccaaatcaatttt 634877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 34328767 - 34328608
Alignment:
Q  7 atttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttc 106  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34328767 atttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttc 34328668  T
Q  107 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaat 166  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34328667 aacaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaat 34328608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 2503711 - 2503582
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2503711 tttttcactatcttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttca 2503612  T
Q  108 acacccaaaattattctaattacccattta 137  Q
    ||| ||||||||||||||||||||||||||    
T  2503611 acaaccaaaattattctaattacccattta 2503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 198189 - 198072
Alignment:
Q  11 ttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaaca 110  Q
    |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  198189 ttcactatcttcttcttattattatctttctattagcaaattaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaaca 198090  T
Q  111 cccaaaattattctaatt 128  Q
     |||||||||||||||||    
T  198089 accaaaattattctaatt 198072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 7540533 - 7540410
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||| ||||||| |||| ||||||||||||    
T  7540533 tgaagttttaatcttctttttagtgaaatggatcccaataataatcctttcaacacccataattcttctaattatccatttagctaccaaaatcccaaca 7540434  T
Q  156 attatctaaatccaaatcaatttt 179  Q
    |||||| |||||||||||||||||    
T  7540433 attatcaaaatccaaatcaatttt 7540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 32360115 - 32360006
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||  || |||||||||||||| |||||||||||||||||||||    
T  32360115 tttttcactatcttaatcttattattatctttctattagcagactaagtgaagttttaa-attttttttagtgaaatgaatcccaataataaccatttca 32360017  T
Q  108 acacccaaaat 118  Q
    | |||||||||    
T  32360016 agacccaaaat 32360006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 24115369 - 24115247
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||| | |||| ||||| |||| ||||||| ||||    
T  24115369 tgaacttttagtcttttttttagtgaaatggatcccaataataatcatttcaacacccagaattcttctgaatacctatttagctaccaaaatccaaaca 24115270  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | ||||||||||||||    
T  24115269 attatcaacatccaaatcaattt 24115247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 12502229 - 12502108
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||| ||||| || || |||||||||||||||||||||  ||| ||||||| |||| ||||||||||||    
T  12502229 tgaagttttagtctt-tatttagtgaaatggatccaaataacaatcaattcaacacccaaaattattctgcttatccatttagctaccaaaatcccaaca 12502131  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  12502130 attatcaacacccaaatcaattt 12502108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 18642575 - 18642454
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| ||||  | |||| |||| ||||||||||||    
T  18642575 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctcattatacttttagctaccaaaatcccaaca 18642477  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  18642476 attatcaacacccaaatcaattt 18642454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 8222415 - 8222311
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatc 173  Q
    ||||||||||||||||||||||| || || |||||| ||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | |||||||    
T  8222415 tttagtgaaatggatcccaataacaatcaattcaacgcccaaaattcttctgattatccatttagctaccaaaatcccaacaattatcaacacccaaatc 8222316  T
Q  174 aattt 178  Q
    |||||    
T  8222315 aattt 8222311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 34242719 - 34242619
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatca 174  Q
    |||||||||||||||||||||||   || |||| ||||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | ||||||||    
T  34242719 ttagtgaaatggatcccaataat---caattcagcacccaaaattcttctgattatccatttagctaccaaaatcccaacaattatcaacacccaaatca 34242623  T
Q  175 attt 178  Q
    ||||    
T  34242622 attt 34242619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 12513346 - 12513222
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaa---ctacgaaaatccca 152  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || ||||||| | |||||| |||| ||||||||||||    |||  |||||||||    
T  12513346 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacatctaaaattcttctgattacccatttattagctatcaaaatccca 12513248  T
Q  153 acaattatctaaatccaaatcaattt 178  Q
    ||||||||| | ||||||||||||||    
T  12513247 acaattatcaacatccaaatcaattt 12513222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 26653897 - 26654018
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| |||||||| |||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||| | ||     
T  26653897 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatctctacg 26653995  T
Q  156 attatctaaatccaaatcaattt 178  Q
    || ||| | | ||||||||||||    
T  26653996 atcatcaacagccaaatcaattt 26654018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 26759866 - 26759987
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||| |||||||| |||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||| | ||     
T  26759866 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatctctacg 26759964  T
Q  156 attatctaaatccaaatcaattt 178  Q
    || ||| | | ||||||||||||    
T  26759965 atcatcaacagccaaatcaattt 26759987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 34841788 - 34841714
Alignment:
Q  75 ttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatc 149  Q
    |||||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  34841788 ttagtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 34841714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 10886542 - 10886485
Alignment:
Q  74 tttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacc 131  Q
    ||||||||||| ||||||| ||| || || |||||||||||||||| |||| ||||||    
T  10886542 tttagtgaaatagatcccactaacaatcaattcaacacccaaaattcttctgattacc 10886485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 126; Significance: 1e-64; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 6425 - 6595
Alignment:
Q  8 tttttcactatcttcatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttca 107  Q
    |||||||||||||| |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6425 tttttcactatcttaatcttattattatcc--ctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaacatttca 6522  T
Q  108 acacccaaaattattctaattacccatttaactacgaaaatcccaacaattatctaaatccaaatcaattttt 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||    
T  6523 acaccaaaaattattctaattacccatttaactacgaaaattcaaacaattatcaaaattcaaatcaattttt 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 166140 - 166260
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||| | ||||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  166140 tgaagttttaatcttctttttagtgaaatgaatctcaataataatcctttcaacacccaaaattctgctaattatccatttaactaccaaaatcccaaca 166239  T
Q  156 attatctaaatccaaatcaat 176  Q
    |||||| |||| |||||||||    
T  166240 attatcaaaattcaaatcaat 166260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 599 - 478
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| |||| ||||  | |||| |||| ||||||||||||    
T  599 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctcattatacttttagctaccaaaatcccaaca 501  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  500 attatcaacacccaaatcaattt 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 109954 - 110075
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  109954 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 110052  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  110053 attatcaacacccaaatcaattt 110075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 106164 - 106043
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||  |||  ||||||||||||    
T  106164 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttggctatcaaaatcccaaca 106066  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  106065 attatcaacacccaaatcaattt 106043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 248 - 127
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaaca 155  Q
    |||||||||| |||| | ||||||||||||||||||| ||| || ||| ||||||||||||||| |||| ||||||| |||| |||| ||||| ||||||    
T  248 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcatatcaacacccaaaattcttctgattacccttttagctaccaaaattccaaca 150  T
Q  156 attatctaaatccaaatcaattt 178  Q
    |||||| | | ||||||||||||    
T  149 attatcaacacccaaatcaattt 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 1175 - 1242
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattct 124  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  1175 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 2120 - 2043
Alignment:
Q  243 acattaggtgatatgttgaaggtggaccacttgatttctagtcaattttgtggccgatttgcccatatttgtgtgaaa 320  Q
    |||||| || ||||| ||||  ||||||||||||  |||||||||||| |||| |||||||| | |||||||||||||    
T  2120 acattacgtaatatgctgaacatggaccacttgacatctagtcaatttcgtggtcgatttgcacgtatttgtgtgaaa 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 124358 - 124317
Alignment:
Q  56 tgaagttttaatcttatttttagtgaaatggatcccaataat 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  124358 tgaagttttaaacttctttttagtgaaatggatcccaataat 124317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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