View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5775_low_8 (Length: 353)
Name: NF5775_low_8
Description: NF5775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5775_low_8 |
 | |
|
| [»] scaffold0028 (2 HSPs) |
| | |
|
| [»] scaffold0040 (2 HSPs) |
| | |
|
| [»] scaffold0482 (1 HSPs) |
| | |
|
| [»] scaffold0233 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 22489009 - 22488666
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22489009 |
gagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttca |
22488910 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22488909 |
aagacccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
22488810 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacca |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22488809 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcacatgagataacca |
22488710 |
T |
|
| Q |
304 |
actgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
|||||||||| ||||||||||| |||| |||| |||||||||| |
|
|
| T |
22488709 |
gctgtaatgagctgtataacttgctgcctaatgctgatgatgtc |
22488666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 24412651 - 24412307
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24412651 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
24412552 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24412551 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
24412452 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24412451 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
24412352 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
24412351 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
24412307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 30445194 - 30445538
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
30445194 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
30445293 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
30445294 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcatttgatt |
30445393 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30445394 |
tctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
30445493 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
30445494 |
agctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30445538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 30454566 - 30454910
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
30454566 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
30454665 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
30454666 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcatttgatt |
30454765 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30454766 |
tctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
30454865 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
30454866 |
agctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30454910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 30459624 - 30459968
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
30459624 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
30459723 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
30459724 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcatttgatt |
30459823 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30459824 |
tctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
30459923 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
30459924 |
agctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30459968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 4 - 326
Target Start/End: Complemental strand, 18568861 - 18568538
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
18568861 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
18568762 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
18568761 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcatttgatt |
18568662 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18568661 |
tctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
18568562 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttg |
326 |
Q |
| |
|
| |||||||||| ||| ||||||| |
|
|
| T |
18568561 |
agctgtaatgagctgtgtaacttg |
18568538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 37 - 347
Target Start/End: Complemental strand, 4635752 - 4635442
Alignment:
| Q |
37 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
136 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4635752 |
tttgtttgcagtgatgattttcacttagagagatattagcttgcaaaactctagcttatgaccttcaaagacccttgtatttataggtgaggagtgtctt |
4635653 |
T |
|
| Q |
137 |
ggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
236 |
Q |
| |
|
|||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| |||| |
|
|
| T |
4635652 |
ggtgatcaagggagaaaatagagctgttggatgcgtttttgatagttgtccaaagtctcaattgatttttcttttcttctttaaaatagctagaatgttc |
4635553 |
T |
|
| Q |
237 |
tcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaatg |
336 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||| || || |
|
|
| T |
4635552 |
tcaaaatgttctttctgatttgcctggctttgaaagcactattgcttgcttgcgcgtgagagaaccagttgtaatgagttgtataacttgttgcgcactg |
4635453 |
T |
|
| Q |
337 |
ttgatgatgtc |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
4635452 |
ctgatgatgtc |
4635442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 24422100 - 24421767
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24422100 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
24422001 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24422000 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgctggacacgtttttgatagctgtccaaagtctcaattgatt |
24421901 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24421900 |
tctcttttcttctttaaaatagcc-----------agaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
24421812 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
24421811 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
24421767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 149 - 336
Target Start/End: Original strand, 24278817 - 24279004
Alignment:
| Q |
149 |
agaaaatagagctgttggacgcgtttt-tgatagctgtccaaagtctcaattgatttctcttttcttcttt-aaaatagccagaacgttctcagaatgtt |
246 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
24278817 |
agaaaatagagttgttggacacgttttttgatagctgtccaaaatctcagttgatttctctcttcttctttaaaaatagccagaacgttctca-aatgtt |
24278915 |
T |
|
| Q |
247 |
ctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaatg |
336 |
Q |
| |
|
| |||||||||||| ||||| ||| ||||||||||||| |||||||| |||| |||||||| ||| | ||||||||||||||| |
|
|
| T |
24278916 |
gtgtctgatttgcctaactttgcttgcattgttgcttgcttgtgcatgagagtaccagttgtaatgaactgt-ttacttgttgcccaatg |
24279004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 149 - 336
Target Start/End: Complemental strand, 24383397 - 24383210
Alignment:
| Q |
149 |
agaaaatagagctgttggacgcgttttt-gatagctgtccaaagtctcaattgatttctcttttcttcttt-aaaatagccagaacgttctcagaatgtt |
246 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
24383397 |
agaaaatagagttgttggacacgttttttgatagctgtccaaaatctcagttgatttctctcttcttctttaaaaatagccagaacgttctca-aatgtt |
24383299 |
T |
|
| Q |
247 |
ctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaatg |
336 |
Q |
| |
|
| |||||||||||| ||||| ||| ||||||||||||| |||||||| |||| |||||||| ||| | ||||||||||||||| |
|
|
| T |
24383298 |
gtgtctgatttgcctaactttgcttgcattgttgcttgcttgtgcatgagagtaccagttgtaatgaactgt-ttacttgttgcccaatg |
24383210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 22118460 - 22118550
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt-agagagatattagcttgcaaaactcttgcttt |
94 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||| |||| |
|
|
| T |
22118460 |
gagagcttggaatttgatttgtttgtgaagagctttgtatgtagtgatgattttcacttgagaga-atatttgctttcaaaactcttacttt |
22118550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 288; Significance: 1e-161; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 15843262 - 15843605
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15843262 |
gagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttca |
15843361 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
15843362 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttttatagctgttcaaagtctcaattgatt |
15843461 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacca |
303 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843462 |
tctcttttcttctttaaaatagccataacgttctcataatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacca |
15843561 |
T |
|
| Q |
304 |
actgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
|||||||||| ||||||| ||| ||||||||| |||||||||| |
|
|
| T |
15843562 |
gctgtaatgagctgtataatttgctgcccaatgctgatgatgtc |
15843605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 37058910 - 37058566
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37058910 |
gagagcttggaatttgctttgtttgcgaagagctctgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttca |
37058811 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37058810 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagtctcaattgatt |
37058711 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttg-cttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37058710 |
tctcttttcttctttaaaatagccagaacgttctcaaaatgttctttctgatttgcctggctttgaaagcactgttgttttgcttgcgcatgagataacc |
37058611 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| |||||||||| |||||| | |||||||||| |
|
|
| T |
37058610 |
agctgtaatgagctgtataactttgtgcccacttctgatgatgtc |
37058566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 3242652 - 3242996
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3242652 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
3242751 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3242752 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
3242851 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3242852 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
3242951 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
3242952 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
3242996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 3917889 - 3917545
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3917889 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
3917790 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3917789 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
3917690 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3917689 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
3917590 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
3917589 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
3917545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 26812331 - 26811987
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26812331 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
26812232 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26812231 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
26812132 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26812131 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
26812032 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
26812031 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
26811987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 26821798 - 26821454
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26821798 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
26821699 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26821698 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
26821599 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26821598 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
26821499 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
26821498 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
26821454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 54690278 - 54690622
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
54690278 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
54690377 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
54690378 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
54690477 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
54690478 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
54690577 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
54690578 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
54690622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 54699709 - 54700053
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
54699709 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgcttatgaccttca |
54699808 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
54699809 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
54699908 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
54699909 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
54700008 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
54700009 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
54700053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 23895981 - 23896325
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
23895981 |
gagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttacaaaactcttgcttatgaccttca |
23896080 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
23896081 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagttgtccaaagtctcaattgatt |
23896180 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23896181 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgcatgagataacc |
23896280 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| |||||| | |||||||||| |
|
|
| T |
23896281 |
agctgtaatgagctgtataacttgctgcccacttctgatgatgtc |
23896325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 18420375 - 18420031
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18420375 |
gagagctttgaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
18420276 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18420275 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
18420176 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18420175 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
18420076 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
18420075 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
18420031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 14101988 - 14101770
Alignment:
| Q |
30 |
gaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgagg |
128 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||| | |||| |||| ||||||||||| ||| || |||||| | |||||||||||||||||| |
|
|
| T |
14101988 |
gaagagttttgtatgtagtgatgattttcactt-gagataatatttgctttaaaaactcttgcatttaacattcaaaaccaattgtatttataggtgagg |
14101890 |
T |
|
| Q |
129 |
agtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagcca |
228 |
Q |
| |
|
|||| ||||||||| ||| |||||||||| ||||||| |||||||| |||||||||||| |||||||||||| ||||||||| |||||| | | |
|
|
| T |
14101889 |
agtgccttggtgatcaagagtgaaaatagagttgttggatacgtttttggcagctgtccaaagcttcaattgatttcacttttcttcattaaaacgggaa |
14101790 |
T |
|
| Q |
229 |
gaacgttctcagaatgttct |
248 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
14101789 |
gaacgttctcagaatgttct |
14101770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 12173144 - 12173040
Alignment:
| Q |
112 |
tgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctctttt |
211 |
Q |
| |
|
||||||||||| || ||||||| ||||||||||| | |||||||||| |||||| | | ||||| |||| | |||||||| |||||||||||| ||||| |
|
|
| T |
12173144 |
tgtatttatagatgtggagtgtgttggtgataaactatgaaaatagagttgttgggcacattttt-atagatatccaaagtttcaattgatttcactttt |
12173046 |
T |
|
| Q |
212 |
cttctt |
217 |
Q |
| |
|
|||||| |
|
|
| T |
12173045 |
cttctt |
12173040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 15173142 - 15172798
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15173142 |
gagagcatggaattttctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttca |
15173043 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15173042 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
15172943 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15172942 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgcatgagataacc |
15172843 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| || ||||||| ||||||||||| ||| || | |||||||||| |
|
|
| T |
15172842 |
agctataatgagctgtataacttgctgctcacttctgatgatgtc |
15172798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 7592829 - 7592485
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7592829 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
7592730 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7592729 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
7592630 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7592629 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
7592530 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
7592529 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
7592485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 15202565 - 15202224
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
15202565 |
gagagcttggaatttcctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatat---cttgcaaaactcttgcttatgaccttca |
15202469 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15202468 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagtctcaattgatt |
15202369 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15202368 |
tctcttttcttctttaaaatagccagaacgttctatgaatgttctttctgatttgtctggctttaaaagcactgttgctttgcttgcgcatgagataacc |
15202269 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||||||||||||||| |||||| | |||||||||| |
|
|
| T |
15202268 |
agctgtaatgagttgtataacttgctgcccacttctgatgatgtc |
15202224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 108 - 347
Target Start/End: Original strand, 4118893 - 4119133
Alignment:
| Q |
108 |
cccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctc |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4118893 |
cccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatttctc |
4118992 |
T |
|
| Q |
208 |
ttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataaccaact |
306 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
4118993 |
ttttcttctttaaaatagccaaaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgcatgagataaccagct |
4119092 |
T |
|
| Q |
307 |
gtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
||||||| ||||||||||||||| || | |||||||||| |
|
|
| T |
4119093 |
ttaatgagctgtataacttgttgctcacttctgatgatgtc |
4119133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 28352086 - 28352430
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28352086 |
gagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
28352185 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28352186 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
28352285 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28352286 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
28352385 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28352386 |
agctgtgatgagttgtataacttgcagcccacttctgatgatgtc |
28352430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 28368019 - 28368362
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28368019 |
gagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
28368118 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28368119 |
aaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
28368217 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28368218 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
28368317 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
28368318 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28368362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 28375837 - 28376180
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28375837 |
gagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
28375936 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28375937 |
aaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
28376035 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28376036 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
28376135 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
28376136 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28376180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 28383659 - 28384002
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28383659 |
gagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
28383758 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28383759 |
aaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
28383857 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28383858 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
28383957 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
28383958 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28384002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 26 - 347
Target Start/End: Original strand, 38529524 - 38529846
Alignment:
| Q |
26 |
ttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtg |
125 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| | |
|
|
| T |
38529524 |
ttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttataatcttcaaaggcccttgtatttataggcg |
38529623 |
T |
|
| Q |
126 |
aggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttc-tcttttcttctttaaaata |
224 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
38529624 |
aggagtgtcttggtgatcaagggagaaaatagagttgttggacacgttttttatagttgtccaaagtctcaattgatttctttttttcttctttaaaata |
38529723 |
T |
|
| Q |
225 |
gccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgtaatgagttgtataact |
324 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| |
|
|
| T |
38529724 |
gccagaccgttctcagaatgttctttctgaattgtctgactttgaaagcactgttgcttgcttgcgcgtgagagaaccagctgtaatgagttgtttaact |
38529823 |
T |
|
| Q |
325 |
tgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
38529824 |
tgttgcccaatgttgatgatgtc |
38529846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 268
Target Start/End: Complemental strand, 4951419 - 4951155
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttc |
102 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||| | ||| |||||| |
|
|
| T |
4951419 |
gagaacttggaatttgctttgtttgcaaagagttttgtttgtagtggtgattttcactt-gagagaatatttacttgcaaaacttctatctttaaccttc |
4951321 |
T |
|
| Q |
103 |
aaaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgat |
202 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
4951320 |
aaaaccacttgtatttataggtgaggagtgtcttggtgatcaagggagaaactagagttgttggacacgtttttgataactgtctaaagtctcaattgat |
4951221 |
T |
|
| Q |
203 |
ttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttg |
268 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||| |||||| | |||||||||| | |||||| |
|
|
| T |
4951220 |
ttctcttttcttcttaaaaataggaagaacgttctcataatgttatgtctgatttgcatagctttg |
4951155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 248
Target Start/End: Original strand, 7784561 - 7784764
Alignment:
| Q |
44 |
gtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgat |
142 |
Q |
| |
|
||||||||||||||||||| |||||| || | |||| ||||||||| |||| ||||||| | | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
7784561 |
gtagtgatgattttcactt-gagagaatacttgcttttaaaactcttactttcaaccttcataaccacttgtatttataggtgagcagtgccttggtgat |
7784659 |
T |
|
| Q |
143 |
aaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttctcagaa |
242 |
Q |
| |
|
||| |||||||| | |||||||| ||||||| |||| ||||||| |||||||||||| |||||||||||| ||| || ||||| ||||| |||| |
|
|
| T |
7784660 |
caagagtgaaaatagtgttgttggacatgtttttggcagctttccaaagcttcaattgatttcacttttcttcttt-aaacagacagaatgttcttagaa |
7784758 |
T |
|
| Q |
243 |
tgttct |
248 |
Q |
| |
|
|||||| |
|
|
| T |
7784759 |
tgttct |
7784764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 27169090 - 27168983
Alignment:
| Q |
110 |
cttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctctt |
209 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| ||| |||||||||| |||||||| ||||| |||||||||| | |||||||||||| ||| |
|
|
| T |
27169090 |
cttgtgtttataggtgaggagtgacttggtgatcaagagtgaaaatagaggtgttggacacgtttagtgcagctgtccaacgattcaattgatttcactt |
27168991 |
T |
|
| Q |
210 |
ttcttctt |
217 |
Q |
| |
|
|||||||| |
|
|
| T |
27168990 |
ttcttctt |
27168983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 265; Significance: 1e-148; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 94796 - 95140
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
94796 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
94895 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
94896 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
94995 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
94996 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
95095 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
95096 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
95140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 104237 - 104581
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
104237 |
gagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttca |
104336 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
104337 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatt |
104436 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
104437 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgcatgagataacc |
104536 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
104537 |
agctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
104581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 256; Significance: 1e-142; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 37 - 347
Target Start/End: Original strand, 31205 - 31516
Alignment:
| Q |
37 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31205 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
31304 |
T |
|
| Q |
137 |
ggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
236 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31305 |
ggtgaacaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
31404 |
T |
|
| Q |
237 |
tcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaat |
335 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||| |||||| | |
|
|
| T |
31405 |
tcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcacatgagataaccagctgtaatgagctgtataacttgctgcccact |
31504 |
T |
|
| Q |
336 |
gttgatgatgtc |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
31505 |
tctgatgatgtc |
31516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 9869 - 9535
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttc |
102 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| |||| ||| |||||||||||| ||| |||||| |
|
|
| T |
9869 |
gagagcttgaaatttgctttgtttgcgaagagctttgtttgtagtgatgtttttcactt-gagagaatattttctttcaaaactcttgcctttaaccttc |
9771 |
T |
|
| Q |
103 |
aaaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgat |
202 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||| |||| |||||||||| || ||||| | ||||||||||||||||||||||||| ||| | |
|
|
| T |
9770 |
aaaactatttgtatatataggtgaggagtgtcttggtgatcaagggtgaaaatagagttgatggacacatttttgatagctgtccaaagtctcatttgtt |
9671 |
T |
|
| Q |
203 |
ttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||| || |||||||||||||||| ||| | |||| |
|
|
| T |
9670 |
ttcacttttcttcttaaaaatagctagaacgttctcagaatgttctgtctgatttgcctagctttgcttgctctgttgcttgcttgcgagtgaaagaacc |
9571 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgtt |
338 |
Q |
| |
|
| || ||||||||||| ||| ||||||| ||||||| |
|
|
| T |
9570 |
agctataatgagttgtttaaattgttgctcaatgtt |
9535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 3356 - 3012
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
3356 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgacagatattagcttacaaaactcttgcttatgaccttca |
3257 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
3256 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtatcttttgatt |
3157 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3156 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
3057 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
3056 |
agctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
3012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 7789443 - 7789787
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
7789443 |
gagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgacagatattagcttacaaaactcttgcttatgaccttca |
7789542 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
7789543 |
aaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtatcttttgatt |
7789642 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7789643 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgcatgagataacc |
7789742 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
| |||||||||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
7789743 |
agctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
7789787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 20713893 - 20713818
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttg |
79 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20713893 |
gagagcttggaattttctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttg |
20713818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 15827462 - 15827376
Alignment:
| Q |
7 |
agcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt-agagagatattagcttgcaaaactcttgcttt |
94 |
Q |
| |
|
||||||||||||| |||||||| ||| | ||||| |||||||||||||||||||| ||||| || | |||| ||||||||||||||| |
|
|
| T |
15827462 |
agcttggaatttg-tttgtttgtgaaaaactttgtatgtagtgatgattttcacttgagaga-atgcttgctttcaaaactcttgcttt |
15827376 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 37 - 347
Target Start/End: Original strand, 26502 - 26812
Alignment:
| Q |
37 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
136 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26502 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttacttatgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
26601 |
T |
|
| Q |
137 |
ggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
236 |
Q |
| |
|
|||||| |||| ||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26602 |
ggtgatcaagggagaaaatagagatgttggacacatttttgatagctatccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
26701 |
T |
|
| Q |
237 |
tcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaatg |
336 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| || |||||||||| ||||||||||| ||||||||| |
|
|
| T |
26702 |
tcagaatgttctttctgatttgtctggctttgaaagcactgttgcttgtatgcgcatgagttaatcagctgtaatgagctgtataacttgctgcccaatg |
26801 |
T |
|
| Q |
337 |
ttgatgatgtc |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
26802 |
ctgatgatgtc |
26812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 4 - 347
Target Start/End: Original strand, 31710830 - 31711162
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
31710830 |
gagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttacttatgaccttca |
31710929 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31710930 |
aaggcccttgtatttataggtgaggagtgtcttggtgatcaagtgagaaaatagagttgttggacgcgtttttgatagttgtccaaagtctcaattgatt |
31711029 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacca |
303 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
31711030 |
tctcttttcttcttaaaaatagc-----------cagaatgttctttctgattttcctggctttgaaagcactgttgcttgcttgcgcgtgagagaacca |
31711118 |
T |
|
| Q |
304 |
actgtaatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
31711119 |
gttgtaatgagctgtataacttgttgcccaatgctgatgatgtc |
31711162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 4 - 327
Target Start/End: Original strand, 24023106 - 24023429
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttca |
103 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||| |
|
|
| T |
24023106 |
gagagcttggaatttgctttatttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaagtcttggttataaccttca |
24023205 |
T |
|
| Q |
104 |
aaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatt |
203 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
24023206 |
aaagcccttgtatttataggtgaggagtgtcttagtgatcaagggagaaaatagagttgttggacacgtttttgatagctatccaaagtctcaattgatt |
24023305 |
T |
|
| Q |
204 |
tctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacca |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
24023306 |
tctcttttcttctttaaaatagccagaacgttcttagaatgttctgtctgaattgccttactttgaaagcactgttgctttcttgcgcgtgagagaacca |
24023405 |
T |
|
| Q |
304 |
actgtaatgagttgtataacttgt |
327 |
Q |
| |
|
||||||||||| ||| |||||||| |
|
|
| T |
24023406 |
actgtaatgagctgtttaacttgt |
24023429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 10 - 347
Target Start/End: Complemental strand, 14272873 - 14272537
Alignment:
| Q |
10 |
ttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttcaaaggc |
108 |
Q |
| |
|
||||| |||| |||||||| |||||||||||| ||||||||||||||||| | | ||||| | || |||| |||||||||| | ||| |||||||||| | |
|
|
| T |
14272873 |
ttggagtttgttttgtttgtgaagagttttgtatgtagtgatgattttcattca-agagaatgtttgctttcaaaactcttacctttaaccttcaaagac |
14272775 |
T |
|
| Q |
109 |
ccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctct |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14272774 |
ccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagtctcaattgatttctct |
14272675 |
T |
|
| Q |
209 |
tttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataaccaactgt |
308 |
Q |
| |
|
||||| ||| |||||||||||||||| |||||||||||| ||||| |||||| ||||||||||| ||||||||||||||| | || |||||||||| |
|
|
| T |
14272674 |
tttctacttataaatagccagaacgttttcagaatgttctgtctgaattgcctaactttgaaagcattgttgcttgcttgcgagggggagaaccaactgt |
14272575 |
T |
|
| Q |
309 |
aatgagttgtataacttgttgcccaatgttgatgatgtc |
347 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| ||||| |
|
|
| T |
14272574 |
aatgagttgt-ttacttgttgcccaatgttgattatgtc |
14272537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 39 - 347
Target Start/End: Complemental strand, 413086 - 412777
Alignment:
| Q |
39 |
tgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttgg |
138 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
413086 |
tgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttcaaaggcccttgtatttataggtgaggagtgtcttgg |
412987 |
T |
|
| Q |
139 |
tgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttctc |
238 |
Q |
| |
|
|||| |||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
412986 |
tgatcaagggagaaaatagagttgttggactcttttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttctc |
412887 |
T |
|
| Q |
239 |
agaatgttctttctgatttgcctggctttgaaagcactgttgc-ttgcttgcgcatgagataaccaactgtaatgagttgtataacttgttgcccaatgt |
337 |
Q |
| |
|
| |||||||||||||||||| ||| ||||||||||||| |||| |||||||| ||||||||||||| |||||||||| ||||||||||| |||||| | |
|
|
| T |
412886 |
ataatgttctttctgatttgtctgactttgaaagcactattgctttgcttgcacatgagataaccagctgtaatgagctgtataacttgctgcccacttc |
412787 |
T |
|
| Q |
338 |
tgatgatgtc |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
412786 |
tgatgatgtc |
412777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 4 - 335
Target Start/End: Original strand, 15810345 - 15810676
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttc |
102 |
Q |
| |
|
||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||| |||| ||| |||||||||||| ||| | ||| |
|
|
| T |
15810345 |
gagagcttgaaatttgctttgtttgcgaggagctttgtttgtagtgatgtttttcactt-gagagaatattttctttcaaaactcttgcctttaaaattc |
15810443 |
T |
|
| Q |
103 |
aaaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttgatagctgtccaaagtctcaattgat |
202 |
Q |
| |
|
||| | ||||||||||||||||| ||||||||||||||| || | | |||||||| |||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
15810444 |
aaaaccacttgtatttataggtgatgagtgtcttggtgatcaatggtgcaaatagagttgttggacacatttttgatagctgtccaaagtcctaattgat |
15810543 |
T |
|
| Q |
203 |
ttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcatgagataacc |
302 |
Q |
| |
|
||| |||||||||| ||||||| ||||| | |||||||||||| | |||||||||| | ||||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
15810544 |
ttcatttttcttcttaaaaatagacagaatgatctcagaatgttatgtctgatttgcataactttgcttgcactgttgcttgcttgcgagtgagagaacc |
15810643 |
T |
|
| Q |
303 |
aactgtaatgagttgtataacttgttgcccaat |
335 |
Q |
| |
|
| |||||||||| ||| | ||||||||| |||| |
|
|
| T |
15810644 |
agctgtaatgagctgttttacttgttgctcaat |
15810676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 318
Target Start/End: Original strand, 41000821 - 41001056
Alignment:
| Q |
83 |
aactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgataaaggaagaaaatagagctgttggacgcgtttttg---at |
179 |
Q |
| |
|
||||| |||||| ||||||||| | ||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||| ||||||| || |
|
|
| T |
41000821 |
aactcatgctttcaaccttcaaaaccacttgtatttataggtgaggagtgccttggtgatcaagagtgaaaatagagatgttggacacgtttttttttat |
41000920 |
T |
|
| Q |
180 |
agctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgtt |
279 |
Q |
| |
|
|| |||||||||||||| |||||||| ||||||||||| ||| | | ||||| | |||||||||||| | |||||||||||| || ||| ||| |||| |
|
|
| T |
41000921 |
agatgtccaaagtctcatttgatttcacttttcttcttaaaattgggcagaaagatctcagaatgttatgtctgatttgcct-gccttgcttgcattgtt |
41001019 |
T |
|
| Q |
280 |
gcttgcttgcgcatgagataaccaactgtaatgagttgt |
318 |
Q |
| |
|
|||||| || ||||| |||||||||||||||||||| |
|
|
| T |
41001020 |
tcttgct--cgagtgagagaaccaactgtaatgagttgt |
41001056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 40999397 - 40999455
Alignment:
| Q |
4 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt |
62 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
40999397 |
gagagcttggaatttactttgtttgcgaagagctttgtatgtagtgatgtttttcactt |
40999455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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