View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5775_low_9 (Length: 294)
Name: NF5775_low_9
Description: NF5775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5775_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 36942719 - 36942979
Alignment:
| Q |
16 |
atggaagagggaggtaa-aagaagattgaaatggtgatactaataatgctaatttgagactatatttagtatagatttgtctcatatattcccatataaa |
114 |
Q |
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| T |
36942719 |
atggaagagggaggtaagaagaagattgaaagggtgatactaataatgctaatttgagactatatttagtatagatttgtctcatatattcccatataaa |
36942818 |
T |
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| Q |
115 |
ggcttcaagaataagatatgaatcaatatgtctaaatgaggtaatgcagggtcaacagcaaattattcttgaattaaagataagaatggacaataatcaa |
214 |
Q |
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| T |
36942819 |
ggcttcaagaataagatatgaatcaatatttctaaatgaggtaatgcagggtcaacagcaaattattcttgaattaaagataagaatggacaataaccaa |
36942918 |
T |
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| Q |
215 |
attgacataaacaaagtactgttacatagaaacaaacaaaaaataattgtctaatgttgtc |
275 |
Q |
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| T |
36942919 |
attgacataaacaaagtactgttacatagaaacaaacaaaaaataattgtctaatgttgtc |
36942979 |
T |
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