View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5776_low_2 (Length: 328)

Name: NF5776_low_2
Description: NF5776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5776_low_2
NF5776_low_2
[»] chr2 (4 HSPs)
chr2 (10-235)||(11951408-11951633)
chr2 (124-231)||(45682230-45682340)
chr2 (122-231)||(2743723-2743834)
chr2 (190-227)||(45682183-45682220)
[»] scaffold0312 (3 HSPs)
scaffold0312 (10-104)||(18890-18986)
scaffold0312 (112-228)||(18729-18847)
scaffold0312 (195-228)||(18618-18651)
[»] chr1 (4 HSPs)
chr1 (10-104)||(411584-411680)
chr1 (112-228)||(411723-411841)
chr1 (124-162)||(11109768-11109806)
chr1 (195-228)||(411919-411952)
[»] chr3 (5 HSPs)
chr3 (112-226)||(45227445-45227561)
chr3 (112-226)||(29896940-29897056)
chr3 (188-231)||(45227394-45227437)
chr3 (195-235)||(45227471-45227511)
chr3 (189-220)||(13468089-13468120)
[»] chr4 (3 HSPs)
chr4 (112-230)||(6736769-6736889)
chr4 (123-179)||(2464276-2464332)
chr4 (195-228)||(2464260-2464293)
[»] chr6 (5 HSPs)
chr6 (122-229)||(29934840-29934949)
chr6 (130-225)||(33296209-33296307)
chr6 (191-220)||(33296155-33296184)
chr6 (188-220)||(27314022-27314054)
chr6 (195-231)||(33296239-33296275)
[»] chr5 (3 HSPs)
chr5 (185-235)||(37369959-37370009)
chr5 (190-220)||(37369065-37369095)
chr5 (191-225)||(37369094-37369128)
[»] chr8 (5 HSPs)
chr8 (185-235)||(21541958-21542008)
chr8 (190-220)||(21542009-21542039)
chr8 (178-231)||(21541890-21541943)
chr8 (178-218)||(21541795-21541835)
chr8 (192-220)||(21541865-21541893)
[»] chr7 (8 HSPs)
chr7 (191-231)||(15687989-15688029)
chr7 (191-231)||(15695582-15695622)
chr7 (191-231)||(15702562-15702602)
chr7 (178-220)||(15695521-15695563)
chr7 (178-220)||(15702501-15702543)
chr7 (178-231)||(15687953-15688006)
chr7 (178-231)||(15695546-15695599)
chr7 (178-231)||(15702526-15702579)
[»] scaffold0608 (1 HSPs)
scaffold0608 (124-162)||(5205-5243)
[»] scaffold0927 (1 HSPs)
scaffold0927 (191-220)||(3511-3540)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 11951633 - 11951408
Alignment:
Q  10 aaaaatatccttgtaatatctaagtcaatactattcgaaaaaactcatactattcacaaaaacccttagaatgaaccaatgattagtcatatataccctt 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11951633 aaaaaaatccttgtaatatctaagtcaatactattcgaaaaaactcatactattcacaaaaacccttagcatgaaccaatgattagtcatatataccctt 11951534  T
Q  110 aacattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttcgtggtgcacagagatataccacattatctctt 209  Q
    ||||||| || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11951533 aacatttcaacatgattaatatcatttatctcttttctctatttgtacataaaccaaattttctcttcgtggtgaacagagatataccacattatctctt 11951434  T
Q  210 cgttgtggcgagcggagatatatcac 235  Q
    |||| |||||||||||||||||||||    
T  11951433 cgttatggcgagcggagatatatcac 11951408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 45682340 - 45682230
Alignment:
Q  124 actaatatcatttatctcttttctctatttatacataaaccaaattttctcttcgtggtgc---acagagatataccacattatctcttcgttgtggcga 220  Q
    ||||||||||||||||||||||| |||||| || |||||||| ||| ||||||||| |||    || | |||||||||||||||||||||||||||||||    
T  45682340 actaatatcatttatctcttttcactatttgtaaataaaccacattatctcttcgttgtggcaaacggggatataccacattatctcttcgttgtggcga 45682241  T
Q  221 gcggagatata 231  Q
     ||||||||||    
T  45682240 acggagatata 45682230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 2743834 - 2743723
Alignment:
Q  122 tgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttcgtggtgc---acagagatataccacattatctcttcgttgtggc 218  Q
    |||||||||||||| |||||||||| |||||| ||||||||||| | ||||||||||| |||    || | ||||||||||||| |||||||||||||||    
T  2743834 tgactaatatcattgatctcttttcactatttgtacataaaccacaatttctcttcgttgtggcgaacggtgatataccacatt-tctcttcgttgtggc 2743736  T
Q  219 gagcggagatata 231  Q
    || ||||||||||    
T  2743735 gaacggagatata 2743723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 45682183 - 45682220
Alignment:
Q  190 gatataccacattatctcttcgttgtggcgagcggaga 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  45682183 gatataccacattatctcttcgttgtggcgaacggaga 45682220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 18986 - 18890
Alignment:
Q  10 aaaaatatccttgtaatatctaagtcaatactattcga-aaaaactcatactattc-acaaaaacccttagaatgaaccaatgattagtcatatata 104  Q
    ||||| || |||| |||||| | ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  18986 aaaaaaatacttgcaatatccacgtcaatactattcgacaaaaactcatactattcgacaaaaacccttagcatgaaccaatgattagtcatatata 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 18847 - 18729
Alignment:
Q  112 cattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttc---gtggtgcacagagatataccacattatctct 208  Q
    ||||| || |||||||| |||| |||||||||||| |||||| ||||||||||| ||| |||||||   |||||| || ||||| |||||||||||||||    
T  18847 catttcaacatgactaagatcaattatctcttttcactatttgtacataaaccacattatctcttcgttgtggtgaacggagat-taccacattatctct 18749  T
Q  209 tcgttgtggcgagcggagat 228  Q
    |||||||||||| |||||||    
T  18748 tcgttgtggcgaacggagat 18729  T

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Target: scaffold0312; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 18651 - 18618
Alignment:
Q  195 accacattatctcttcgttgtggcgagcggagat 228  Q
    |||||||||||||||||||||||||| |||||||    
T  18651 accacattatctcttcgttgtggcgaacggagat 18618  T

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Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 411584 - 411680
Alignment:
Q  10 aaaaatatccttgtaatatctaagtcaatactattcga-aaaaactcatactattc-acaaaaacccttagaatgaaccaatgattagtcatatata 104  Q
    ||||| || |||| |||||| | ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  411584 aaaaaaatacttgcaatatccacgtcaatactattcgacaaaaactcatactattcgacaaaaacccttagcatgaaccaatgattagtcatatata 411680  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 411723 - 411841
Alignment:
Q  112 cattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttc---gtggtgcacagagatataccacattatctct 208  Q
    ||||| || |||||||| |||| |||||||||||| |||||| ||||||||||| ||| |||||||   |||||| || ||||| |||||||||||||||    
T  411723 catttcaacatgactaagatcaattatctcttttcactatttgtacataaaccacattatctcttcgttgtggtgaacggagat-taccacattatctct 411821  T
Q  209 tcgttgtggcgagcggagat 228  Q
    |||||||||||| |||||||    
T  411822 tcgttgtggcgaacggagat 411841  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 11109806 - 11109768
Alignment:
Q  124 actaatatcatttatctcttttctctatttatacataaa 162  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  11109806 actaatatcatttatctcttttcactatttgtacataaa 11109768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 411919 - 411952
Alignment:
Q  195 accacattatctcttcgttgtggcgagcggagat 228  Q
    |||||||||||||||||||||||||| |||||||    
T  411919 accacattatctcttcgttgtggcgaacggagat 411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 45227561 - 45227445
Alignment:
Q  112 cattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttc---gtggtgcacagagatataccacattatctct 208  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||   |||||| || |||||||| |||||| |||||    
T  45227561 catttcaacatgactaatatcatttatctcttttcactatttgtacataaaccacattatctcttcgttgtggtgaacggagatatatcacatt-tctct 45227463  T
Q  209 tcgttgtggcgagcggag 226  Q
    | |||||||||| |||||    
T  45227462 ttgttgtggcgaacggag 45227445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 29896940 - 29897056
Alignment:
Q  112 cattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttc---gtggtgcacagagatataccacattatctct 208  Q
    |||||||| | | ||||||||||||| |||| ||| |||||| ||||||||||| ||| ||| |||   |||| | |||||||||||||||||| |||||    
T  29896940 cattttaacacgcctaatatcatttacctctattcgctatttctacataaaccacattatcttttcgttgtggcgaacagagatataccacatt-tctct 29897038  T
Q  209 tcgttgtggcgagcggag 226  Q
    ||||||||| || |||||    
T  29897039 tcgttgtggtgaacggag 29897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 45227437 - 45227394
Alignment:
Q  188 gagatataccacattatctcttcgttgtggcgagcggagatata 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  45227437 gagatataccacattatctcttcgttgtggcgaacggagatata 45227394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 45227511 - 45227471
Alignment:
Q  195 accacattatctcttcgttgtggcgagcggagatatatcac 235  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  45227511 accacattatctcttcgttgtggtgaacggagatatatcac 45227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 220
Target Start/End: Complemental strand, 13468120 - 13468089
Alignment:
Q  189 agatataccacattatctcttcgttgtggcga 220  Q
    ||||||||||||||||||||||||||||||||    
T  13468120 agatataccacattatctcttcgttgtggcga 13468089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 6736769 - 6736889
Alignment:
Q  112 cattttaagatgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttc---gtggtgcacagagatataccacattatctct 208  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||   |||| | || || ||||| |||||| |||||    
T  6736769 catttcaacatgactaatatcatttatctcttttcactatttgtacataaaccatattatctcttcgttgtggcgaacggaaatatagcacatt-tctct 6736867  T
Q  209 tcgttgtggcgagcggagatat 230  Q
    | |||||||||| |||||||||    
T  6736868 ttgttgtggcgaacggagatat 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 2464332 - 2464276
Alignment:
Q  123 gactaatatcatttatctcttttctctatttatacataaaccaaattttctcttcgt 179  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||    
T  2464332 gactaatatcatttatctcttttcactatttgtacataaaccacattatctcttcgt 2464276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 2464293 - 2464260
Alignment:
Q  195 accacattatctcttcgttgtggcgagcggagat 228  Q
    |||||||||||||||||||||||||| |||||||    
T  2464293 accacattatctcttcgttgtggcgaacggagat 2464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 29934949 - 29934840
Alignment:
Q  122 tgactaatatcatttatctcttttctctatttatacataaaccaaattttctcttcgtggtgc---acagagatataccacattatctcttcgttgtggc 218  Q
    |||||| ||||||| |||||||||| |||||| ||||||||||| | ||||||||||| |||    || | ||||||||||||| |||||||||||||||    
T  29934949 tgactactatcattgatctcttttcactatttgtacataaaccacaatttctcttcgttgtggcgaacggtgatataccacatt-tctcttcgttgtggc 29934851  T
Q  219 gagcggagata 229  Q
    || ||| ||||    
T  29934850 gaacggtgata 29934840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 33296307 - 33296209
Alignment:
Q  130 atcatttatctcttttctctatttatacataaaccaaattttctcttcgtggtgc---acagagatataccacattatctcttcgttgtggcgagcgga 225  Q
    |||||||||||||||||  ||||| ||||||||||| ||| ||||||||| |||    || || |||||||||||||| ||||||||||||||| ||||    
T  33296307 atcatttatctcttttcattatttgtacataaaccacattatctcttcgttgtggcgaacggaaatataccacattatttcttcgttgtggcgaacgga 33296209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 33296184 - 33296155
Alignment:
Q  191 atataccacattatctcttcgttgtggcga 220  Q
    ||||||||||||||||||||||||||||||    
T  33296184 atataccacattatctcttcgttgtggcga 33296155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 27314022 - 27314054
Alignment:
Q  188 gagatataccacattatctcttcgttgtggcga 220  Q
    |||||| ||||||||||||||||||||||||||    
T  27314022 gagatagaccacattatctcttcgttgtggcga 27314054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 33296275 - 33296239
Alignment:
Q  195 accacattatctcttcgttgtggcgagcggagatata 231  Q
    |||||||||||||||||||||||||| |||| |||||    
T  33296275 accacattatctcttcgttgtggcgaacggaaatata 33296239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 37370009 - 37369959
Alignment:
Q  185 acagagatataccacattatctcttcgttgtggcgagcggagatatatcac 235  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  37370009 acagagatataccacattatctcttcgttgtggcgaacggaaatatgtcac 37369959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 37369095 - 37369065
Alignment:
Q  190 gatataccacattatctcttcgttgtggcga 220  Q
    |||||||||||||||||||||||||||||||    
T  37369095 gatataccacattatctcttcgttgtggcga 37369065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 37369128 - 37369094
Alignment:
Q  191 atataccacattatctcttcgttgtggcgagcgga 225  Q
    |||||||||||||||||||||||||||||| ||||    
T  37369128 atataccacattatctcttcgttgtggcgaacgga 37369094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 21542008 - 21541958
Alignment:
Q  185 acagagatataccacattatctcttcgttgtggcgagcggagatatatcac 235  Q
    |||||| |||||||||||||| |||||||||||||| |||| |||||||||    
T  21542008 acagaggtataccacattatcccttcgttgtggcgaacggaaatatatcac 21541958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 21542039 - 21542009
Alignment:
Q  190 gatataccacattatctcttcgttgtggcga 220  Q
    |||||||||||||||||||||||||||||||    
T  21542039 gatataccacattatctcttcgttgtggcga 21542009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 21541943 - 21541890
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcgagcggagatata 231  Q
    |||||| || || |||||||| ||||||||||||||||||||| ||||| ||||    
T  21541943 gtggtgaacggatatataccatattatctcttcgttgtggcgaacggaggtata 21541890  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 21541835 - 21541795
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggc 218  Q
    |||||| || || ||||||||||||||||||||||||||||    
T  21541835 gtggtgaacggatatataccacattatctcttcgttgtggc 21541795  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 21541893 - 21541865
Alignment:
Q  192 tataccacattatctcttcgttgtggcga 220  Q
    |||||||||||||||||||||||||||||    
T  21541893 tataccacattatctcttcgttgtggcga 21541865  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 15688029 - 15687989
Alignment:
Q  191 atataccacattatctcttcgttgtggcgagcggagatata 231  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  15688029 atataccacattatctcttcgttgtggtgaacggagatata 15687989  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 15695622 - 15695582
Alignment:
Q  191 atataccacattatctcttcgttgtggcgagcggagatata 231  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  15695622 atataccacattatctcttcgttgtggtgaacggagatata 15695582  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 15702602 - 15702562
Alignment:
Q  191 atataccacattatctcttcgttgtggcgagcggagatata 231  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  15702602 atataccacattatctcttcgttgtggtgaacggagatata 15702562  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 15695563 - 15695521
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcga 220  Q
    |||||| || || ||||||||||||||||||||||||||||||    
T  15695563 gtggtgaacggaaatataccacattatctcttcgttgtggcga 15695521  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 15702543 - 15702501
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcga 220  Q
    |||||| || || ||||||||||||||||||||||||||||||    
T  15702543 gtggtgaacggaaatataccacattatctcttcgttgtggcga 15702501  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 15688006 - 15687953
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcgagcggagatata 231  Q
    |||||| || |||||||||||||||||||| ||||||||| || |||| |||||    
T  15688006 gtggtgaacggagatataccacattatctcatcgttgtggtgaacggaaatata 15687953  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 15695599 - 15695546
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcgagcggagatata 231  Q
    |||||| || |||||||||||||||||||| ||||||||| || |||| |||||    
T  15695599 gtggtgaacggagatataccacattatctcatcgttgtggtgaacggaaatata 15695546  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 15702579 - 15702526
Alignment:
Q  178 gtggtgcacagagatataccacattatctcttcgttgtggcgagcggagatata 231  Q
    |||||| || |||||||||||||||||||| ||||||||| || |||| |||||    
T  15702579 gtggtgaacggagatataccacattatctcatcgttgtggtgaacggaaatata 15702526  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 5243 - 5205
Alignment:
Q  124 actaatatcatttatctcttttctctatttatacataaa 162  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  5243 actaatatcatttatctcttttcactatttgtacataaa 5205  T

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Target: scaffold0927 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 3511 - 3540
Alignment:
Q  191 atataccacattatctcttcgttgtggcga 220  Q
    ||||||||||||||||||||||||||||||    
T  3511 atataccacattatctcttcgttgtggcga 3540  T

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