View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5777_high_13 (Length: 251)
Name: NF5777_high_13
Description: NF5777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5777_high_13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 31126291 - 31126527
Alignment:
| Q |
15 |
aatcatataccgaaggatgtaaaattggcaaaactattcgaaaaacgggacaaatccaacacataaatcatcaataacacaaggctttgcccctgcttca |
114 |
Q |
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| T |
31126291 |
aatcatataccgaaggatgtaaaattggcaaaactattcaaaaaacgggacaaatccaacacataaatcatcaataacacaaggctttgcccctgcttca |
31126390 |
T |
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| Q |
115 |
ctcaatataaacaaacaattaacgattcattcatattgcataagaaaaccctacattatatacttcatcaacaacaaaaacaacactaaaattcccccca |
214 |
Q |
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| T |
31126391 |
ctcaatataaacaaacaattaacgattcattcatattgcataagaaaaccctacattatatacttcatcaacaacaaaaacaacactaaaattcccccaa |
31126490 |
T |
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| Q |
215 |
aaaaataattagaaaacttacgtgtcgtgttggagaa |
251 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
31126491 |
aaaaataattagaaaacttacgtgtcgtgttggagaa |
31126527 |
T |
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