View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5777_low_19 (Length: 207)

Name: NF5777_low_19
Description: NF5777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5777_low_19
NF5777_low_19
[»] chr3 (46 HSPs)
chr3 (15-193)||(47731782-47731961)
chr3 (94-135)||(40791372-40791413)
chr3 (91-159)||(45149849-45149918)
chr3 (94-135)||(45252507-45252548)
chr3 (94-158)||(4070552-4070616)
chr3 (91-134)||(34921178-34921221)
chr3 (91-134)||(38667138-38667181)
chr3 (94-158)||(9717913-9717979)
chr3 (94-159)||(24828302-24828368)
chr3 (94-135)||(34503665-34503706)
chr3 (94-135)||(49316830-49316871)
chr3 (91-135)||(20495328-20495372)
chr3 (94-166)||(41222708-41222780)
chr3 (91-134)||(21627336-21627379)
chr3 (101-159)||(33777520-33777579)
chr3 (94-135)||(1093082-1093124)
chr3 (94-135)||(13737773-13737815)
chr3 (94-135)||(24783203-24783245)
chr3 (94-135)||(45258740-45258782)
chr3 (94-135)||(54492738-54492780)
chr3 (94-135)||(1033862-1033903)
chr3 (95-135)||(6071801-6071842)
chr3 (94-135)||(20189576-20189617)
chr3 (94-138)||(20819240-20819285)
chr3 (94-135)||(21577307-21577348)
chr3 (94-135)||(25360362-25360402)
chr3 (94-158)||(25556375-25556440)
chr3 (94-135)||(27656317-27656357)
chr3 (94-134)||(31584707-31584748)
chr3 (94-135)||(32750705-32750746)
chr3 (94-135)||(37280394-37280435)
chr3 (94-135)||(38667860-38667900)
chr3 (94-135)||(39285429-39285470)
chr3 (94-135)||(40065509-40065550)
chr3 (94-135)||(40163062-40163103)
chr3 (94-135)||(40514969-40515010)
chr3 (91-135)||(50672644-50672689)
chr3 (94-135)||(52395185-52395226)
chr3 (94-135)||(53178624-53178665)
chr3 (94-134)||(54493688-54493729)
chr3 (91-134)||(25555489-25555533)
chr3 (91-138)||(35547419-35547463)
chr3 (111-158)||(36735904-36735952)
chr3 (91-135)||(37117194-37117238)
chr3 (113-157)||(54800065-54800109)
chr3 (94-134)||(55482394-55482434)
[»] chr1 (40 HSPs)
chr1 (94-160)||(7436544-7436610)
chr1 (94-159)||(45216750-45216816)
chr1 (94-160)||(10373534-10373601)
chr1 (91-159)||(22775439-22775508)
chr1 (94-160)||(49204274-49204341)
chr1 (94-159)||(11991986-11992052)
chr1 (94-135)||(16834389-16834430)
chr1 (94-135)||(19076426-19076467)
chr1 (94-135)||(19124316-19124357)
chr1 (94-135)||(40116989-40117030)
chr1 (94-135)||(44432309-44432350)
chr1 (94-134)||(10387649-10387689)
chr1 (94-160)||(11707535-11707603)
chr1 (91-135)||(36723308-36723352)
chr1 (94-160)||(45507888-45507956)
chr1 (94-135)||(16798283-16798325)
chr1 (94-135)||(27234256-27234298)
chr1 (94-159)||(32537243-32537309)
chr1 (94-158)||(32815114-32815180)
chr1 (94-160)||(37328523-37328589)
chr1 (94-135)||(43281198-43281240)
chr1 (94-135)||(44209125-44209167)
chr1 (94-158)||(46585641-46585707)
chr1 (94-135)||(1798788-1798829)
chr1 (94-134)||(4212847-4212888)
chr1 (94-135)||(21040303-21040344)
chr1 (111-159)||(27327085-27327134)
chr1 (94-134)||(29357381-29357422)
chr1 (94-135)||(29487310-29487351)
chr1 (94-135)||(30634320-30634361)
chr1 (94-135)||(32074732-32074773)
chr1 (94-158)||(37813167-37813232)
chr1 (94-135)||(44210111-44210152)
chr1 (94-135)||(49217040-49217081)
chr1 (94-158)||(1023441-1023505)
chr1 (91-159)||(6917145-6917213)
chr1 (94-134)||(18542308-18542348)
chr1 (91-158)||(26537809-26537877)
chr1 (91-135)||(32186088-32186132)
chr1 (94-134)||(34556844-34556884)
[»] chr8 (37 HSPs)
chr8 (91-160)||(6743640-6743708)
chr8 (94-158)||(38257190-38257254)
chr8 (91-134)||(14024472-14024515)
chr8 (94-135)||(11180018-11180059)
chr8 (91-135)||(3419076-3419122)
chr8 (94-159)||(15211575-15211642)
chr8 (94-158)||(28776814-28776880)
chr8 (94-159)||(43284218-43284284)
chr8 (94-135)||(15730522-15730563)
chr8 (94-135)||(20831814-20831855)
chr8 (94-135)||(37007216-37007257)
chr8 (94-160)||(2657625-2657693)
chr8 (91-161)||(14053185-14053257)
chr8 (112-159)||(41449952-41449999)
chr8 (94-135)||(1651100-1651142)
chr8 (94-135)||(2656838-2656880)
chr8 (94-135)||(12765125-12765167)
chr8 (101-135)||(22720742-22720776)
chr8 (94-135)||(32989946-32989988)
chr8 (94-135)||(25841-25882)
chr8 (94-135)||(26948-26989)
chr8 (91-135)||(5794605-5794650)
chr8 (94-135)||(7723935-7723976)
chr8 (94-134)||(12703962-12704003)
chr8 (91-135)||(15602097-15602142)
chr8 (94-135)||(15731381-15731422)
chr8 (94-135)||(36893785-36893826)
chr8 (94-134)||(38713388-38713429)
chr8 (94-135)||(39863372-39863413)
chr8 (94-158)||(40520980-40521045)
chr8 (94-160)||(1077184-1077252)
chr8 (94-158)||(1143203-1143267)
chr8 (94-134)||(3416692-3416732)
chr8 (94-134)||(17960354-17960394)
chr8 (94-160)||(17961142-17961210)
chr8 (94-134)||(32448967-32449007)
chr8 (94-160)||(42355545-42355613)
[»] chr5 (29 HSPs)
chr5 (94-160)||(36811607-36811674)
chr5 (94-159)||(5790557-5790623)
chr5 (94-158)||(5382439-5382504)
chr5 (94-135)||(6914151-6914192)
chr5 (94-158)||(25752982-25753048)
chr5 (94-159)||(38091448-38091514)
chr5 (94-138)||(20730946-20730991)
chr5 (94-159)||(26394941-26395006)
chr5 (94-135)||(27188769-27188810)
chr5 (94-160)||(15181263-15181331)
chr5 (91-159)||(41411795-41411866)
chr5 (94-159)||(1830209-1830276)
chr5 (92-138)||(14195888-14195935)
chr5 (94-159)||(40315676-40315743)
chr5 (91-136)||(4105000-4105046)
chr5 (94-135)||(19292251-19292293)
chr5 (94-159)||(40988929-40988995)
chr5 (94-159)||(42341936-42342002)
chr5 (94-135)||(5573987-5574028)
chr5 (94-135)||(9772255-9772296)
chr5 (94-135)||(10622764-10622805)
chr5 (94-135)||(25823777-25823818)
chr5 (94-134)||(29235477-29235518)
chr5 (94-134)||(746364-746404)
chr5 (94-160)||(12737088-12737156)
chr5 (94-160)||(12799911-12799979)
chr5 (94-137)||(27187952-27187996)
chr5 (94-134)||(29236242-29236282)
chr5 (88-135)||(36779231-36779279)
[»] chr7 (43 HSPs)
chr7 (91-135)||(21124835-21124880)
chr7 (94-135)||(30022480-30022522)
chr7 (94-135)||(30023287-30023329)
chr7 (94-135)||(28290032-28290073)
chr7 (94-158)||(33210258-33210323)
chr7 (94-158)||(35667760-35667825)
chr7 (94-135)||(44472861-44472902)
chr7 (91-138)||(4237202-4237250)
chr7 (94-158)||(7337966-7338030)
chr7 (94-137)||(12231029-12231072)
chr7 (94-159)||(28312563-28312630)
chr7 (94-157)||(42260684-42260747)
chr7 (93-135)||(48611319-48611362)
chr7 (94-135)||(2756059-2756101)
chr7 (94-159)||(17775341-17775407)
chr7 (94-135)||(21386416-21386458)
chr7 (94-135)||(21458630-21458672)
chr7 (94-135)||(21459537-21459579)
chr7 (94-135)||(29418170-29418212)
chr7 (94-158)||(30838413-30838479)
chr7 (94-135)||(34959187-34959229)
chr7 (94-135)||(34993665-34993707)
chr7 (113-158)||(44158669-44158715)
chr7 (94-160)||(14103942-14104010)
chr7 (94-160)||(14413959-14414027)
chr7 (94-135)||(17774312-17774353)
chr7 (101-138)||(17897082-17897119)
chr7 (94-158)||(18121493-18121558)
chr7 (94-138)||(21387274-21387319)
chr7 (91-135)||(24212329-24212374)
chr7 (91-135)||(33697375-33697420)
chr7 (91-135)||(36786664-36786709)
chr7 (91-135)||(37731639-37731684)
chr7 (94-135)||(38184969-38185010)
chr7 (94-158)||(41798299-41798364)
chr7 (94-135)||(44745063-44745104)
chr7 (94-135)||(46329709-46329750)
chr7 (94-131)||(46949705-46949742)
chr7 (112-160)||(17983226-17983274)
chr7 (94-134)||(18226106-18226146)
chr7 (94-158)||(31309436-31309500)
chr7 (91-134)||(36897415-36897459)
chr7 (94-158)||(40668736-40668803)
[»] chr4 (53 HSPs)
chr4 (94-158)||(36112268-36112333)
chr4 (91-135)||(18436411-18436455)
chr4 (91-135)||(22535221-22535265)
chr4 (94-135)||(10663803-10663845)
chr4 (94-135)||(10877948-10877990)
chr4 (94-159)||(21857610-21857676)
chr4 (94-159)||(21913473-21913539)
chr4 (90-135)||(29245452-29245498)
chr4 (94-160)||(34824672-34824738)
chr4 (94-135)||(6644042-6644083)
chr4 (94-158)||(27179795-27179860)
chr4 (91-136)||(29616740-29616785)
chr4 (94-135)||(53139999-53140040)
chr4 (94-158)||(54284142-54284207)
chr4 (94-160)||(1195733-1195801)
chr4 (91-135)||(6450106-6450150)
chr4 (94-134)||(15741086-15741126)
chr4 (94-138)||(29617609-29617653)
chr4 (91-134)||(6507502-6507545)
chr4 (94-160)||(6644955-6645022)
chr4 (94-160)||(22525310-22525377)
chr4 (91-137)||(24317643-24317690)
chr4 (112-157)||(25705296-25705338)
chr4 (94-159)||(36928493-36928560)
chr4 (94-160)||(40033323-40033390)
chr4 (94-159)||(42260339-42260406)
chr4 (94-135)||(22524323-22524365)
chr4 (94-159)||(22731868-22731934)
chr4 (94-135)||(30288680-30288722)
chr4 (94-135)||(30317582-30317624)
chr4 (94-135)||(36111502-36111544)
chr4 (94-160)||(42259278-42259344)
chr4 (94-135)||(55497294-55497336)
chr4 (94-135)||(1613469-1613510)
chr4 (94-135)||(4939878-4939919)
chr4 (91-135)||(13994539-13994584)
chr4 (94-135)||(17214959-17215000)
chr4 (94-135)||(17606926-17606967)
chr4 (94-135)||(21312222-21312263)
chr4 (94-135)||(23465633-23465674)
chr4 (94-135)||(23475941-23475982)
chr4 (94-134)||(23591276-23591317)
chr4 (94-135)||(32860687-32860728)
chr4 (95-135)||(37687810-37687851)
chr4 (94-135)||(38350353-38350394)
chr4 (94-135)||(40278267-40278308)
chr4 (94-134)||(42342634-42342675)
chr4 (91-135)||(48084043-48084088)
chr4 (94-135)||(55082457-55082498)
chr4 (94-134)||(15031860-15031900)
chr4 (98-137)||(29762454-29762494)
chr4 (94-160)||(50605255-50605323)
chr4 (94-137)||(56279788-56279832)
[»] chr6 (18 HSPs)
chr6 (94-160)||(9474764-9474830)
chr6 (94-159)||(5339868-5339934)
chr6 (94-135)||(748656-748697)
chr6 (95-158)||(15191787-15191851)
chr6 (95-158)||(15468700-15468764)
chr6 (94-160)||(34658552-34658620)
chr6 (94-135)||(10624480-10624522)
chr6 (94-135)||(23074323-23074365)
chr6 (94-135)||(29724147-29724189)
chr6 (94-135)||(1050912-1050953)
chr6 (94-135)||(2318501-2318542)
chr6 (94-135)||(8743110-8743151)
chr6 (94-135)||(13209890-13209931)
chr6 (94-135)||(15127736-15127777)
chr6 (94-135)||(18739347-18739388)
chr6 (94-135)||(25404891-25404932)
chr6 (91-134)||(5400880-5400924)
chr6 (94-135)||(14432022-14432065)
[»] scaffold0006 (1 HSPs)
scaffold0006 (94-135)||(41349-41391)
[»] chr2 (27 HSPs)
chr2 (94-135)||(3364086-3364128)
chr2 (94-135)||(44746972-44747013)
chr2 (94-134)||(3362715-3362755)
chr2 (91-135)||(28149886-28149930)
chr2 (93-135)||(28636126-28636169)
chr2 (94-135)||(5439086-5439128)
chr2 (98-135)||(5607586-5607624)
chr2 (91-159)||(12177927-12177997)
chr2 (94-135)||(33869649-33869691)
chr2 (94-135)||(38935744-38935786)
chr2 (94-135)||(44748020-44748062)
chr2 (94-135)||(6731437-6731478)
chr2 (94-158)||(7338883-7338948)
chr2 (93-156)||(7531905-7531970)
chr2 (91-135)||(7778548-7778593)
chr2 (94-135)||(9758308-9758349)
chr2 (94-135)||(26368140-26368181)
chr2 (91-135)||(28242637-28242682)
chr2 (94-135)||(35059259-35059300)
chr2 (94-135)||(43130086-43130127)
chr2 (94-135)||(43209096-43209137)
chr2 (94-135)||(45160381-45160422)
chr2 (91-135)||(18736659-18736703)
chr2 (94-134)||(21540329-21540369)
chr2 (91-134)||(27481263-27481307)
chr2 (94-135)||(29366591-29366634)
chr2 (94-160)||(44257984-44258052)
[»] scaffold1903 (1 HSPs)
scaffold1903 (108-160)||(1200-1252)
[»] scaffold0083 (1 HSPs)
scaffold0083 (94-135)||(25550-25592)
[»] scaffold0031 (1 HSPs)
scaffold0031 (93-135)||(95028-95070)
[»] scaffold0474 (2 HSPs)
scaffold0474 (94-158)||(12127-12192)
scaffold0474 (94-129)||(13198-13234)
[»] scaffold0060 (1 HSPs)
scaffold0060 (94-135)||(46532-46573)
[»] scaffold0004 (1 HSPs)
scaffold0004 (94-158)||(130881-130946)
[»] scaffold0672 (1 HSPs)
scaffold0672 (94-134)||(5303-5343)
[»] scaffold0343 (1 HSPs)
scaffold0343 (94-160)||(10125-10193)
[»] scaffold0007 (1 HSPs)
scaffold0007 (94-134)||(42094-42134)


Alignment Details
Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 47731782 - 47731961
Alignment:
Q  15 ttatactagatggtcatcgcctt-gttaatatatttcatttttgttttttcnnnnnnnnnnnnnnnntcactgctataaattttgttaatttcaggaagt 113  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||                |||||||| |||||||| |||||||||||| ||    
T  47731782 ttatactaggtggtcatcgcctttgttaatatatttcatttttattttttcaaaaaaaaataaaaaatcactgctgtaaattttattaatttcaggaggt 47731881  T
Q  114 aattgacgaaacttacaatttcggataaaaattgtctatttactcaactttaaacactataaaatgatgaggtcatattt 193  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47731882 aattgacgaaacttacaatttcggagaaaaattatctatttactcaactttaaacactataaaatgatgaggtcatattt 47731961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 40791413 - 40791372
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  40791413 ttttgttaatttcaggaggtaattgacgaaacttacaatttc 40791372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 45149849 - 45149918
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||  |||||||||||    
T  45149849 aaattttgttaatttcagagagtaattgacgaaacttacaatttcaggaggaaaattaactatttactca 45149918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 45252507 - 45252548
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  45252507 ttttgttaatttcaggaggtaattgacgaaacttacaatttc 45252548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 4070552 - 4070616
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    |||||||||||||| || |||||||||||||| ||||||||| ||  ||||||| ||||||||||    
T  4070552 ttttgttaatttcatgaggtaattgacgaaacctacaatttcagaggaaaattgactatttactc 4070616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 34921221 - 34921178
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  34921221 aaattttgttaatttcaaggagtaattgacgaaacttacaattt 34921178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 38667181 - 38667138
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  38667181 aaattttgttaatttcaggaggtaattgacgaaacctacaattt 38667138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 9717979 - 9717913
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||||| || ||||||| ||||||||||||||| ||| |||||||| ||||||||||    
T  9717979 ttttgttaatttcaggtaggtaattgatgaaacttacaatttcaggagaaaaattgactatttactc 9717913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 24828302 - 24828368
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||   |||||| |||||||||||    
T  24828302 ttttgttaatttcagggagtaattgatgaaacttacaatttcaggagggaaattgactatttactca 24828368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 34503665 - 34503706
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  34503665 ttttgttaatttcagggagtaattgacgaaacttaaaatttc 34503706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 49316830 - 49316871
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  49316830 ttttgttaatttcgggatgtaattgacgaaacttacaatttc 49316871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 20495372 - 20495328
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||    
T  20495372 aaattttgttaatttcaggagataattgatgaaacttacaatttc 20495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 41222708 - 41222780
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaactttaa 166  Q
    |||||||||||||||  ||||||| | ||||||||||||||| ||  | ||||| |||||||||| |||||||    
T  41222708 ttttgttaatttcagagagtaattaatgaaacttacaatttcagaggataattgcctatttactctactttaa 41222780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 21627379 - 21627336
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||||||  |||||||| ||||||||||||||    
T  21627379 aaattttgttaatttcagggggtaattgatgaaacttacaattt 21627336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 33777579 - 33777520
Alignment:
Q  101 aatttcaggaagtaattgacgaaacttacaatttcggata-aaaattgtctatttactca 159  Q
    |||||||||| |||||||||||||||||||||||| || |  |||||| |||||||||||    
T  33777579 aatttcaggaggtaattgacgaaacttacaatttcagagaggaaattgactatttactca 33777520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1093082 - 1093124
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  1093082 ttttgttaatttcaagagagtaattgacgaaacttacaatttc 1093124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 13737773 - 13737815
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  13737773 ttttgttaatttcaggaaggtaattgatgaaacttacaatttc 13737815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 24783203 - 24783245
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  24783203 ttttattaatttcaggaaggtaattgacgaaacttacaatttc 24783245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 45258740 - 45258782
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  45258740 ttttgttaatttcatggaggtaattgacgaaacttacaatttc 45258782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 54492780 - 54492738
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  54492780 ttttgttaatttcaagggagtaattgacgaaacttacaatttc 54492738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1033862 - 1033903
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||| |||||  ||||||||||||||||||||||||    
T  1033862 ttttgttaatatcagggggtaattgacgaaacttacaatttc 1033903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 6071801 - 6071842
Alignment:
Q  95 tttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  6071801 tttgttaatttcaggaaggtaattgatgaaacttacaatttc 6071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 20189576 - 20189617
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  20189576 ttttgttaatttcagggggtaattgatgaaacttacaatttc 20189617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 20819285 - 20819240
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgga 138  Q
    |||||||||||||| || | ||||||||||||||||||||||||||    
T  20819285 ttttgttaatttcaagagggtaattgacgaaacttacaatttcgga 20819240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 21577307 - 21577348
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  21577307 ttttgttaatttcggggggtaattgacgaaacttacaatttc 21577348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25360362 - 25360402
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  25360362 ttttgttaatttcag-aggtaattgacgaaacttacaatttc 25360402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 25556375 - 25556440
Alignment:
Q  94 ttttgttaatttcaggaa-gtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||   |||||||||||||||||||||||| || |  ||||| ||||||||||    
T  25556375 ttttgttaatttcaggggtgtaattgacgaaacttacaatttcagagagtaattgcctatttactc 25556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 27656317 - 27656357
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  27656317 ttttgttaatttcggga-gtaattgacgaaacttacaatttc 27656357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 31584748 - 31584707
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  31584748 ttttgttaatttcaagaagataattgacgaaacttacaattt 31584707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 32750746 - 32750705
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  32750746 ttttgttaatttcaggggataattgacgaaacttacaatttc 32750705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 37280394 - 37280435
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||| |||||||||    
T  37280394 ttttgttaatttcagggggtaattgacgaaacctacaatttc 37280435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 38667860 - 38667900
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  38667860 ttttgttaatttcaggga-taattgacgaaacttacaatttc 38667900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 39285429 - 39285470
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||| |||||||||    
T  39285429 ttttgttaatttcagggggtaattgacgaaacctacaatttc 39285470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 40065550 - 40065509
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  40065550 ttttgttaatttcagggggtaattgacaaaacttacaatttc 40065509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 40163103 - 40163062
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| | ||||||||| |||||||||||||||    
T  40163103 ttttgttaatttcaaggagtaattgatgaaacttacaatttc 40163062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 40514969 - 40515010
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  40514969 ttttgttaatttcaggggataattgacgaaacttacaatttc 40515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 50672644 - 50672689
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||  | |||||||||||||||||||||||    
T  50672644 aaattttgttaatttcaggggggtaattgacgaaacttacaatttc 50672689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 52395185 - 52395226
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  52395185 ttttgttaatttcaaggaataattgacgaaacttacaatttc 52395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 53178624 - 53178665
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| |||||||||  ||||||||||||||    
T  53178624 ttttgttaatttcagggagtaattgattaaacttacaatttc 53178665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 54493688 - 54493729
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  54493688 ttttgttaatttcagggaggtaattgacgaaacttacaattt 54493729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 25555533 - 25555489
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    |||||||||||||||||| | | ||||||||||||||||||||||    
T  25555533 aaattttgttaatttcagaagggtaattgacgaaacttacaattt 25555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 35547419 - 35547463
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttcgga 138  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||    
T  35547419 aaattttgttaattt-agg--gtaattgacgaaacttacaatttcgga 35547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 36735952 - 36735904
Alignment:
Q  111 agtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||||||||    
T  36735952 agtaattgatgaaacttacaatttcaggaaaaaaattgactatttactc 36735904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 37117194 - 37117238
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| | ||||||||||||  |||||||||    
T  37117194 aaattttgttaatttcagggaataattgacgaaatatacaatttc 37117238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 54800109 - 54800065
Alignment:
Q  113 taattgacgaaacttacaatttcggataaaaattgtctatttact 157  Q
    |||||||||||||||||||||||| | || |||||| ||||||||    
T  54800109 taattgacgaaacttacaatttcgaagaataattgtatatttact 54800065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 55482394 - 55482434
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||   |||||||||||||||||||||||    
T  55482394 ttttgttaatttcagagggtaattgacgaaacttacaattt 55482434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 7436610 - 7436544
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||    
T  7436610 ttttgttaatttcaggaagtaattgatgaaacttacaatttcagaggaaaattgactatttactcaa 7436544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 45216816 - 45216750
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  45216816 ttttgttaatttcaggagggtaattgacgaaacttacaatttcggaggaaaattgactatttactca 45216750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 10373601 - 10373534
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcgg-ataaaaattgtctatttactcaa 160  Q
    ||||||||||||||| | |||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  10373601 ttttgttaatttcagaaggtaattgacgaaacctacaatttcggaagaaaaattgactatttactcaa 10373534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 22775508 - 22775439
Alignment:
Q  91 aaattttgttaatttcag-gaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||  | |||||  |||||||||||    
T  22775508 aaattttgttaatttcagagaagtaattgatgaaacttacaatttcggggagaaattaactatttactca 22775439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 49204274 - 49204341
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaa-aattgtctatttactcaa 160  Q
    |||||||||||||||| |||||||||||||||||| |||||| |  ||| ||||| ||||||||||||    
T  49204274 ttttgttaatttcagggagtaattgacgaaacttataatttcagtgaaataattgactatttactcaa 49204341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 11992052 - 11991986
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||| |  |||||||| ||||||||||||||| || |||||||| |||||||||||    
T  11992052 ttttgttaatttcagaggggtaattgatgaaacttacaatttcagaaaaaaattgactatttactca 11991986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 16834430 - 16834389
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  16834430 ttttgttaatttcagggggtaattgacgaaacttacaatttc 16834389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 19076426 - 19076467
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  19076426 ttttgttaatttcaggtggtaattgacgaaacttacaatttc 19076467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 19124316 - 19124357
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  19124316 ttttgttaatttcaggtggtaattgacgaaacttacaatttc 19124357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 40116989 - 40117030
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  40116989 ttttgttaatttcagggagtaattaacgaaacttacaatttc 40117030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44432309 - 44432350
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  44432309 ttttgttaatttcagggggtaattgacgaaacttacaatttc 44432350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 10387649 - 10387689
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  10387649 ttttgttaatttcaggaggtaattgatgaaacttacaattt 10387689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 11707535 - 11707603
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgga-taaaaattgtctatttactcaa 160  Q
    ||||||||||||||||| | ||||||||||||| ||||||||| ||  |||||||| ||||||||||||    
T  11707535 ttttgttaatttcaggaggataattgacgaaacctacaatttcagagaaaaaattgactatttactcaa 11707603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 36723352 - 36723308
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||    
T  36723352 aaattttgttaatttcaaggggtaattgacgaaacttacaatttc 36723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 45507956 - 45507888
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| |||  ||||||| ||||||||||||    
T  45507956 ttttgttaatttcaggggagtaattgatgaaacttacaatttcaggaggaaaattgactatttactcaa 45507888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 16798283 - 16798325
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  16798283 ttttgttaattttaggaagataattgacgaaacttacaatttc 16798325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 27234298 - 27234256
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  27234298 ttttgttaatttcagggaggtaattgacgaaacttacaatttc 27234256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 32537243 - 32537309
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||| |||||||||||  |||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  32537243 ttttattaatttcagggggtaattgacgaaacttacaatttcaggggagaaattgactatttactca 32537309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 32815114 - 32815180
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||| ||  |||||||||||||||||||||||| ||||   ||||||||||||||||    
T  32815114 ttttgttaatttcaagggggtaattgacgaaacttacaatttcaggatggtaattgtctatttactc 32815180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 37328523 - 37328589
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||  || ||||||||||||||||| ||||||||    |||||| ||||||||||||    
T  37328523 ttttgttaatttcgagaggtaattgacgaaacttataatttcgggaggaaattgactatttactcaa 37328589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 43281240 - 43281198
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  43281240 ttttgttaatttcagggagataattgacgaaacttacaatttc 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 44209167 - 44209125
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  44209167 ttttgttaatttcaggagggtaattgacgaaacttacaatttc 44209125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 46585641 - 46585707
Alignment:
Q  94 ttttgttaatttc-aggaagtaattgacgaaacttacaatttcgga-taaaaattgtctatttactc 158  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  46585641 ttttgttaatttcgagtgagtaattgacgaaacttacaatttcagaggaaaaattgactatttactc 46585707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 1798829 - 1798788
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  1798829 ttttgttaatttcaaaaggtaattgacgaaacttacaatttc 1798788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 4212888 - 4212847
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  4212888 ttttgttaatttcagagaagtaattgatgaaacttacaattt 4212847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 21040344 - 21040303
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| | |||| |||||||||||||||||||    
T  21040344 ttttgttaatttcagaaggtaaatgacgaaacttacaatttc 21040303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 27327085 - 27327134
Alignment:
Q  111 agtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||| ||||||||| ||| |||||||| |||||||||||    
T  27327085 agtaattgacgaaacctacaatttcaggagaaaaattgactatttactca 27327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 29357422 - 29357381
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  29357422 ttttgttaatttcagggagataattgacgaaacttacaattt 29357381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 29487351 - 29487310
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  29487351 ttttgttaaatttaggaggtaattgacgaaacttacaatttc 29487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 30634361 - 30634320
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  30634361 ttttgttaatttcagagggtaattgacgaaacttacaatttc 30634320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 32074732 - 32074773
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  32074732 ttttgttaatttcaagaggtaattgatgaaacttacaatttc 32074773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 37813167 - 37813232
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||| | ||||||| ||||||||||||||| ||   |||||| ||||||||||    
T  37813167 ttttgttaatttcaggaggataattgatgaaacttacaatttcagagggaaattgactatttactc 37813232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44210111 - 44210152
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  44210111 ttttgttaatttcagggggtaattgacaaaacttacaatttc 44210152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 49217040 - 49217081
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  49217040 ttttgttaatttcagtgggtaattgacgaaacttacaatttc 49217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 1023505 - 1023441
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    |||||||||||||||||| |||||||  ||||||| |||||| ||   |||||| ||||||||||    
T  1023505 ttttgttaatttcaggaaataattgataaaacttataatttcagagggaaattgactatttactc 1023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 6917213 - 6917145
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||||     |||||||||||||||||||||||| |   | |||||||||||||||||    
T  6917213 aaattttgttaatttcgatgggtaattgacgaaacttacaatttcaggggataattgtctatttactca 6917145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 18542308 - 18542348
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  18542308 ttttgttaatgtcagggggtaattgacgaaacttacaattt 18542348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 26537809 - 26537877
Alignment:
Q  91 aaattttgttaatttcaggaagt-aattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||| |||  || ||||||||||||||||||||||||   | ||||| ||||||||||    
T  26537809 aaattttgttaatttgagggggttaattgacgaaacttacaatttcggtggataattgcctatttactc 26537877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 32186132 - 32186088
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||   |||||||| |||||||||||||||    
T  32186132 aaattttgttaatttcagagggtaattgatgaaacttacaatttc 32186088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 34556884 - 34556844
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||| |||| | |||||||||||||||||||||||    
T  34556884 ttttgttaatatcagaaggtaattgacgaaacttacaattt 34556844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 6743640 - 6743708
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | |   ||||||||||||||||||    
T  6743640 aaattttgttaatatcaggaagtaattgacgaaacttacaatttcag-tggtaattgtctatttactcaa 6743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 38257190 - 38257254
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||| | ||||||||||||||||||||||||||   ||||||| ||||||||||    
T  38257190 ttttgttaatttcagaaggtaattgacgaaacttacaatttcgggggaaaattgactatttactc 38257254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 14024472 - 14024515
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14024472 aaattttgttaatttcaggaggtaattgacgaaacttacaattt 14024515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 11180018 - 11180059
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  11180018 ttttgttaatttcagggagtaattgacgaaacttacaatttc 11180059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 3419076 - 3419122
Alignment:
Q  91 aaattttgttaatttcag--gaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  3419076 aaattttgttaatttcagatgaagtaattgacgaaacttacaatttc 3419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 15211575 - 15211642
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||  ||||||| |||||||||||    
T  15211575 ttttgttaatttcaggaaggtaattgatgaaacttacaatttcaggaggaaaattgactatttactca 15211642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 28776814 - 28776880
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||| |||| ||||||| ||||||||||||||| ||| |||||||| ||||||||||    
T  28776814 ttttgttaatttcaagaaggtaattgatgaaacttacaatttcaggagaaaaattgactatttactc 28776880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 43284284 - 43284218
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||| | | ||||||| ||||||||||||||| || |||||||| |||||||||||    
T  43284284 ttttgttaatttcagaagggtaattgatgaaacttacaatttcagagaaaaattgactatttactca 43284218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 15730563 - 15730522
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  15730563 ttttgttaatttcagggggtaattgacgaaacttacaatttc 15730522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 20831855 - 20831814
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  20831855 ttttgttaatttcaggaggtaattgatgaaacttacaatttc 20831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 37007216 - 37007257
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  37007216 ttttgttaatttcaagaggtaattgacgaaacttacaatttc 37007257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 2657625 - 2657693
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttcgga-taaaaattgtctatttactcaa 160  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  2657625 ttttgttaatttcaaggaggtaattgatgaaacttacaatttcagaggaaaaattgactatttactcaa 2657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 14053257 - 14053185
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaac 161  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||| |||   |||||| |||||||||||||    
T  14053257 aaattttgttaatttcaggagggtaattgatgaaacttacaatttcaggagggaaattgactatttactcaac 14053185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 41449999 - 41449952
Alignment:
Q  112 gtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||||    
T  41449999 gtaattgtcgaaacttacaatttcggagaataattgcctatttactca 41449952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1651100 - 1651142
Alignment:
Q  94 ttttgttaatttcagg-aagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  1651100 ttttgttaatttcagggaagtaattgatgaaacttacaatttc 1651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 2656880 - 2656838
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  2656880 ttttgttaatttcaggaagataattgatgaaacttacaatttc 2656838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 12765125 - 12765167
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  12765125 ttttgttaatttcagaggagtaattgacgaaacttacaatttc 12765167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 22720742 - 22720776
Alignment:
Q  101 aatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  22720742 aatttcaggaaataattgacgaaacttacaatttc 22720776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 32989946 - 32989988
Alignment:
Q  94 ttttgttaatttcagg-aagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  32989946 ttttgttaatttcagggaagtaattgatgaaacttacaatttc 32989988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 25882 - 25841
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  25882 ttttgttaatttcaggggataattgacgaaacttacaatttc 25841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 26948 - 26989
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||| ||||||||    
T  26948 ttttgttaatttcagggggtaattgacgaaactcacaatttc 26989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 5794650 - 5794605
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||    
T  5794650 aaattttgttaatttcaggagggtaattgatgaaacttacaatttc 5794605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 7723935 - 7723976
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  7723935 ttttgttaatttcagggggtaattgatgaaacttacaatttc 7723976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 12704003 - 12703962
Alignment:
Q  94 ttttgttaatttcagg-aagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  12704003 ttttgttaatttcagggaagtaattgatgaaacttacaattt 12703962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 15602097 - 15602142
Alignment:
Q  91 aaattttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||    
T  15602097 aaattttgttaatttcagaggggtaattgacgaaacttacaatttc 15602142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 15731422 - 15731381
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  15731422 ttttgttaatttcagggggtaattgatgaaacttacaatttc 15731381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 36893826 - 36893785
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  36893826 ttttgttaatttcagggggtaattgatgaaacttacaatttc 36893785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 38713429 - 38713388
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  38713429 ttttgttaatttcaggagggtaattgacgaaacttacaattt 38713388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 39863413 - 39863372
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  39863413 ttttgttaatttcaaaaggtaattgacgaaacttacaatttc 39863372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 40520980 - 40521045
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||||  | ||||||| ||||||||||||||| ||| | |||||| ||||||||||    
T  40520980 ttttgttaatttcagagaataattgatgaaacttacaatttcaggaaagaaattgactatttactc 40521045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 1077252 - 1077184
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||| |  |||||||| ||||||||||||||| | | |||||||| ||||||||||||    
T  1077252 ttttgttaatttcagaggggtaattgatgaaacttacaatttcagaagaaaaattgactatttactcaa 1077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 1143267 - 1143203
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    |||||||||||||  ||  ||||||||||||||||||||||| ||   |||||| ||||||||||    
T  1143267 ttttgttaatttcgagagataattgacgaaacttacaatttcagagggaaattgactatttactc 1143203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 3416732 - 3416692
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||  ||||| ||||||||||||||||||||||||    
T  3416732 ttttgttaacgtcagggagtaattgacgaaacttacaattt 3416692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 17960394 - 17960354
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  17960394 ttttgttaatttcagggggtaattgatgaaacttacaattt 17960354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 17961142 - 17961210
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| ||  | |||||| ||||||||||||    
T  17961142 ttttgttaatttcaggaaaataattgatgaaacttacaatttcagggaagaaattgactatttactcaa 17961210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 32449007 - 32448967
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  32449007 ttttgttaatttcagagaataattgacgaaacttacaattt 32448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 42355613 - 42355545
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgga-taaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  | ||||||||||||| ||||||||| ||  |||||||| ||||||||||||    
T  42355613 ttttgttaatttcaggtgggtaattgacgaaacctacaatttcagaggaaaaattgactatttactcaa 42355545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 36811607 - 36811674
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||  ||||||| ||||||||||||    
T  36811607 ttttgttaatttcagggagtaattgatgaaacttacaatttcaggaggaaaattgactatttactcaa 36811674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 5790557 - 5790623
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||    |||||||||||||||||    
T  5790557 ttttgttaatttcagggagtaattgacgaaacttacaatttcaggagggtaattgtctatttactca 5790623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 5382439 - 5382504
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||   ||||||||||||||||||    
T  5382439 ttttgttaatttcagggggtaattgacgaaacttacaatttcagggggaaaattgtctatttactc 5382504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 6914192 - 6914151
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  6914192 ttttgttaatttcaggaggtaattgacgaaacttacaatttc 6914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 25752982 - 25753048
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||| | |||||| ||||||||||    
T  25752982 ttttgttaatttcaggggagtaattgacgaaacttacaatttcaggagagaaattgactatttactc 25753048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 38091448 - 38091514
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||  ||||||| |||||||||||    
T  38091448 ttttgttaatttcaggagataattgacgaaacttacaatttcatgaggaaaattgactatttactca 38091514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 20730991 - 20730946
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgga 138  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20730991 ttttgttaatttcaggaggataattgacgaaacttacaatttcgga 20730946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 26394941 - 26395006
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||||  |||||||||||||| |||||||||||    |||||| |||||||||||    
T  26394941 ttttgttaatttcagggggtaattgacgaaacctacaatttcggggggaaattgactatttactca 26395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 27188769 - 27188810
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  27188769 ttttgttaatttcagggggtaattgacgaaacttacaatttc 27188810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 15181263 - 15181331
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||| | ||||||| ||||||||||||||| ||| | |||||| ||||||||||||    
T  15181263 ttttgttaatttcaggagggtaattgatgaaacttacaatttcaggagagaaattgactatttactcaa 15181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 41411866 - 41411795
Alignment:
Q  91 aaattttgttaatttcag-gaagtaattgacgaaacttacaatttc--ggataaaaattgtctatttactca 159  Q
    |||||||||||||||||| || |||||||| |||||||||||||||  | | |||||||| |||||||||||    
T  41411866 aaattttgttaatttcagagaggtaattgatgaaacttacaatttcaggaaaaaaaattgactatttactca 41411795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 1830209 - 1830276
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||| || |||||||| |||||||||||||||  || |||||||| |||||||||||    
T  1830209 ttttgttaatttcagagaggtaattgatgaaacttacaatttcaagaaaaaaattgactatttactca 1830276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 14195935 - 14195888
Alignment:
Q  92 aattttgttaatttcaggaag-taattgacgaaacttacaatttcgga 138  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  14195935 aattttgtaaatttcaggaaaataattgacgaaacttacaatttcgga 14195888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 40315676 - 40315743
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||| || |||||||| |||||||||||||||  || |||||||| |||||||||||    
T  40315676 ttttgttaatttcagagaggtaattgatgaaacttacaatttcaagaaaaaaattgactatttactca 40315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 4105000 - 4105046
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttcg 136  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  4105000 aaattttgttaatttcagaaggataattgacgaaacttacaatttcg 4105046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 19292293 - 19292251
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  19292293 ttttgttaatttcaggggagtaattgacgaaacttacaatttc 19292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 40988929 - 40988995
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||| |  | ||||||||||||||||||||||||  || |||||||| |||||||||||    
T  40988929 ttttgttaattttaaaaggtaattgacgaaacttacaatttcaagagaaaaattgactatttactca 40988995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 42341936 - 42342002
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||||||   |||||||| ||||||||||||||| |||  ||||||| |||||||||||    
T  42341936 ttttgttaatttcagagggtaattgatgaaacttacaatttcaggaggaaaattgactatttactca 42342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 5574028 - 5573987
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||| |||||||||||  ||||||||||||||||||||||||    
T  5574028 ttttattaatttcagggggtaattgacgaaacttacaatttc 5573987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 9772296 - 9772255
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  9772296 ttttgttaatttcagggggtaattgatgaaacttacaatttc 9772255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 10622805 - 10622764
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||| | ||||||||||||||||||||||    
T  10622805 ttttgttaatttcgggaggcaattgacgaaacttacaatttc 10622764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25823777 - 25823818
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  25823777 ttttgttaatttcggaaggtaattgacgaaacttacaatttc 25823818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 29235518 - 29235477
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  29235518 ttttgttaatttcaggagggtaattgacgaaacttacaattt 29235477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 746404 - 746364
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  746404 ttttgttaatttcagaaggtaattgacgaaacctacaattt 746364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 12737088 - 12737156
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  | ||||||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  12737088 ttttgttaatttcagggggataattgatgaaacttacaatttcaggggaaaaattgactatttactcaa 12737156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 12799911 - 12799979
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  | ||||||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  12799911 ttttgttaatttcagggggataattgatgaaacttacaatttcaggggaaaaattgactatttactcaa 12799979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 27187996 - 27187952
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttcgg 137  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||    
T  27187996 ttttgttaatttcaagggggtaattgacgaaacttacaatttcgg 27187952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 29236242 - 29236282
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  29236242 ttttgttaatttcgaggagtaattgacgaaacttacaattt 29236282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 36779231 - 36779279
Alignment:
Q  88 tataaattttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    ||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  36779231 tataagttttgttaatttcaaagaggtaattgacgaaacttacaatttc 36779279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 21124880 - 21124835
Alignment:
Q  91 aaattttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  21124880 aaattttgttaatttcagagaagtaattgacgaaacttacaatttc 21124835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 30022522 - 30022480
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  30022522 ttttgttaatttcaggagagtaattgacgaaacttacaatttc 30022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 30023287 - 30023329
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  30023287 ttttgttaatttcaggagagtaattgacgaaacttacaatttc 30023329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 28290073 - 28290032
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  28290073 ttttgttaatttcagggagtaattgatgaaacttacaatttc 28290032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 33210323 - 33210258
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||||| ||||||||||||| |||||||||  |  ||||||| ||||||||||    
T  33210323 ttttgttaatttcaggaaggtaattgacgaaacctacaatttcaaaggaaaattgactatttactc 33210258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 35667825 - 35667760
Alignment:
Q  94 ttttgttaatttc-aggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||| | || |||||||| |||||||||||||||||| | |||||| ||||||||||    
T  35667825 ttttgttaatttcgatgaggtaattgaagaaacttacaatttcggagagaaattgactatttactc 35667760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44472861 - 44472902
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  44472861 ttttgttaatttcagggggtaattgacgaaacttacaatttc 44472902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 4237202 - 4237250
Alignment:
Q  91 aaattttgttaatttcagga-agtaattgacgaaacttacaatttcgga 138  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||    
T  4237202 aaattttgttaatttcaggagaataattgacgaaatttacaatttcgga 4237250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 7337966 - 7338030
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||| ||||||||||||||| |  |||| ||| ||||||||||    
T  7337966 ttttgttaatttcagggggtaattgatgaaacttacaatttcagggaaaagttgactatttactc 7338030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 12231072 - 12231029
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcgg 137  Q
    ||||||||||||||||  |||||||||||||| |||||||||||    
T  12231072 ttttgttaatttcagggggtaattgacgaaacctacaatttcgg 12231029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 28312563 - 28312630
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||||| | ||||||||||||| ||||||||| ||  |||||||| |||||||||||    
T  28312563 ttttgttaatttcaggaggataattgacgaaacctacaatttcaggggaaaaattgactatttactca 28312630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 42260747 - 42260684
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttact 157  Q
    |||||||||||||||    |||||||||||||||||||||||||||   ||||| |||||||||    
T  42260747 ttttgttaatttcagtggataattgacgaaacttacaatttcggatggtaattggctatttact 42260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 48611319 - 48611362
Alignment:
Q  93 attttgttaatttcaggaa-gtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  48611319 attttgttaatttcatgaaagtaattgacgaaacttacaatttc 48611362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 2756059 - 2756101
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  2756059 ttttgttaatttcaggagggtaattgacgaaacttacaatttc 2756101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 17775341 - 17775407
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||  || |||||||||||||||||||||||| |  || ||||| |||||||||||    
T  17775341 ttttgttaatttcaaagaggtaattgacgaaacttacaatttcagggaataattgcctatttactca 17775407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 21386458 - 21386416
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  21386458 ttttgttaatttcaggaggataattgacgaaacttacaatttc 21386416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 21458672 - 21458630
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  21458672 ttttgttaatttcaggatggtaattgacgaaacttacaatttc 21458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 21459537 - 21459579
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  21459537 ttttgttaatttcaggagggtaattgacgaaacttacaatttc 21459579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 29418170 - 29418212
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  29418170 ttttgttaatttcaggggagtaattgacgaaacttacaatttc 29418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 30838479 - 30838413
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||||  |||||||||||||| ||| |||||||| ||||||||||    
T  30838479 ttttgttaatttcaggggagtaattgattaaacttacaatttcaggaaaaaaattgactatttactc 30838413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 34959187 - 34959229
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  34959187 ttttgttaatttcagggaggtaattgacgaaacttacaatttc 34959229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 34993707 - 34993665
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  34993707 ttttgttaatttcagaagagtaattgacgaaacttacaatttc 34993665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 44158669 - 44158715
Alignment:
Q  113 taattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  44158669 taattgacgaaacttacaatttcgggagaataattgtctatttactc 44158715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 14103942 - 14104010
Alignment:
Q  94 ttttgttaatttcaggaag--taattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| |   | ||||| ||||||||||||    
T  14103942 ttttgttaatttcagggagggtaattgacgaaacttacaatttcaggggataattgactatttactcaa 14104010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 14413959 - 14414027
Alignment:
Q  94 ttttgttaatttcaggaag--taattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| |   | ||||| ||||||||||||    
T  14413959 ttttgttaatttcagggagggtaattgacgaaacttacaatttcaggggataattgactatttactcaa 14414027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 17774353 - 17774312
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  17774353 ttttgttaatttcaggggataattgacgaaacttacaatttc 17774312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 17897119 - 17897082
Alignment:
Q  101 aatttcaggaagtaattgacgaaacttacaatttcgga 138  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  17897119 aatttcaggaggtaattgatgaaacttacaatttcgga 17897082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 18121493 - 18121558
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcgga-taaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||| |||||||| |||||| ||  |||||||| ||||||||||    
T  18121493 ttttgttaatttcagggggtaattgatgaaacttataatttcagaggaaaaattgactatttactc 18121558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 21387274 - 21387319
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgga 138  Q
    |||||||||||||| || | ||||||||||||||||||||||||||    
T  21387274 ttttgttaatttcaagagggtaattgacgaaacttacaatttcgga 21387319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 24212374 - 24212329
Alignment:
Q  91 aaattttgttaatttca-ggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  24212374 aaattttgttaatttcaagggggtaattgacgaaacttacaatttc 24212329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 33697375 - 33697420
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||  | |||||||||||||||||||||||    
T  33697375 aaattttgttaatttcaggggggtaattgacgaaacttacaatttc 33697420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 36786709 - 36786664
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||    
T  36786709 aaattttgttaatttcagaaaggtaattgatgaaacttacaatttc 36786664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 37731639 - 37731684
Alignment:
Q  91 aaattttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||    
T  37731639 aaattttgttaatttcaggagggtaattgacgaaacctacaatttc 37731684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 38184969 - 38185010
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  38184969 ttttgttaatttcgagaggtaattgacgaaacttacaatttc 38185010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 41798364 - 41798299
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcgga-taaaaattgtctatttactc 158  Q
    ||||||||||||| ||  |||||||| ||||||||||||||| ||  |||||||| ||||||||||    
T  41798364 ttttgttaatttcggggggtaattgatgaaacttacaatttcagaggaaaaattgactatttactc 41798299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44745063 - 44745104
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  44745063 ttttgttaatttcagggggtaattgatgaaacttacaatttc 44745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 46329750 - 46329709
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  46329750 ttttgttaatttcagggggtaattgatgaaacttacaatttc 46329709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 46949705 - 46949742
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaa 131  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  46949705 ttttgttaatttcagggggtaattgacgaaacttacaa 46949742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 17983274 - 17983226
Alignment:
Q  112 gtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||| |||||| ||  | ||||||||||||||||||    
T  17983274 gtaattgacgaaacttataatttcagaggataattgtctatttactcaa 17983226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 18226106 - 18226146
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||   ||||||||||||||||||||||    
T  18226106 ttttgttaatttcaggggataattgacgaaacttacaattt 18226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 31309436 - 31309500
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    |||||||||  |||||| ||| ||||||||||||||||||||||   | ||||| ||||||||||    
T  31309436 ttttgttaacgtcaggaggtagttgacgaaacttacaatttcgggggataattgcctatttactc 31309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 36897459 - 36897415
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    ||||||||||||||||||| || |||| |||||||||||||||||    
T  36897459 aaattttgttaatttcagggaggtaatagacgaaacttacaattt 36897415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 40668736 - 40668803
Alignment:
Q  94 ttttgttaatttcaggaa-gtaattgacgaaacttacaatttc--ggataaaaattgtctatttactc 158  Q
    |||||||||||||||||| ||||||||  ||||||| ||||||  ||| |||||||| ||||||||||    
T  40668736 ttttgttaatttcaggaaggtaattgataaaacttataatttccaggagaaaaattgactatttactc 40668803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 36112268 - 36112333
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||    ||||||||||||||||    
T  36112268 ttttgttaatttcaggaaggtaattgacgaaacttacaatttcagagggtaattgtctatttactc 36112333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 18436455 - 18436411
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  18436455 aaattttgttaatttcaggaggtaattgatgaaacttacaatttc 18436411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 22535265 - 22535221
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  22535265 aaattttgttaatttcagaaagtaattgatgaaacttacaatttc 22535221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 10663803 - 10663845
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  10663803 ttttgttaatttcatggaagtaattgacgaaacttacaatttc 10663845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 10877948 - 10877990
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  10877948 ttttgttaatttcatggaagtaattgacgaaacttacaatttc 10877990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 21857676 - 21857610
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||  || ||||| |||||||||||    
T  21857676 ttttgttaatttcagaggagtgattgacgaaacttacaatttcggggaataattgcctatttactca 21857610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 21913539 - 21913473
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||  || ||||| |||||||||||    
T  21913539 ttttgttaatttcagaggagtgattgacgaaacttacaatttcggggaataattgcctatttactca 21913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 29245498 - 29245452
Alignment:
Q  90 taaattttgttaatttcaggaa-gtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  29245498 taaattttgttaatttcaggaaggtaattgatgaaacttacaatttc 29245452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 34824738 - 34824672
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  |||||||| ||||||||||||||| ||   |||||| ||||||||||||    
T  34824738 ttttgttaatttcagggggtaattgatgaaacttacaatttcagaaggaaattgactatttactcaa 34824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 6644083 - 6644042
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  6644083 ttttgttaatttcagggggtaattgacgaaacttacaatttc 6644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 27179860 - 27179795
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||| ||||||||||||||| ||  |||||||| ||||||||||    
T  27179860 ttttgttaatttcagggggtaattgatgaaacttacaatttcagggaaaaaattgactatttactc 27179795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 29616785 - 29616740
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttcg 136  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||    
T  29616785 aaattttgttaatatcagggggtaattgacgaaacttacaatttcg 29616740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 53139999 - 53140040
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  53139999 ttttgttaatttcagggggtaattgacgaaacttacaatttc 53140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 54284142 - 54284207
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaa-tttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  |||||||||||||| ||||| |||| || |||||||| ||||||||||    
T  54284142 ttttgttaatttcagggggtaattgacgaaacctacaattttcagagaaaaattgactatttactc 54284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 1195733 - 1195801
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||| |||  ||||||| ||||||||||||    
T  1195733 ttttgttaattccaggaagataattgatgaaacttacaatttcaggaggaaaattgactatttactcaa 1195801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 6450150 - 6450106
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||    
T  6450150 aaattttgttaatttcatggagtaattgacgaaacctacaatttc 6450106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 15741086 - 15741126
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  15741086 ttttgttaatgttaggaagtaattgacgaaacttacaattt 15741126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 29617609 - 29617653
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcgga 138  Q
    |||||||||| |||||  |||||||||||||||||||||||||||    
T  29617609 ttttgttaatatcaggtggtaattgacgaaacttacaatttcgga 29617653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 6507545 - 6507502
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  6507545 aaattttattaatttcaagaaataattgacgaaacttacaattt 6507502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 6644955 - 6645022
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||    ||||| ||||||||||||    
T  6644955 ttttgttaatttcaaggaggtaattgacgaaacttacaatttcagaaggtaattgcctatttactcaa 6645022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 22525310 - 22525377
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||| || ||||||||||||||||||||||| |   | ||||| ||||||||||||    
T  22525310 ttttgttaatttcagggaggtaattgacgaaacttacaatttcaggggataattgcctatttactcaa 22525377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 24317690 - 24317643
Alignment:
Q  91 aaattttgttaatttcagga-agtaattgacgaaacttacaatttcgg 137  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||    
T  24317690 aaattttgttaatttcaggagattaattgatgaaacttacaatttcgg 24317643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 25705338 - 25705296
Alignment:
Q  112 gtaattgacgaaacttacaatttcggataaaaattgtctatttact 157  Q
    ||||||||||||||||||||||||||||   |||||||||||||||    
T  25705338 gtaattgacgaaacttacaatttcggat---aattgtctatttact 25705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 36928493 - 36928560
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataa-aaattgtctatttactca 159  Q
    |||||||||||| ||| || ||||||||||||||||||||||| || || |||||| |||||||||||    
T  36928493 ttttgttaattttagggaggtaattgacgaaacttacaatttcagaaaagaaattgactatttactca 36928560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 40033390 - 40033323
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||  || ||||||||||||||||||||||||| ||   |||||| ||||||||||||    
T  40033390 ttttgttaatttcgagagagtaattgacgaaacttacaatttctgagggaaattgactatttactcaa 40033323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 42260339 - 42260406
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||  | ||||| |||||||||||    
T  42260339 ttttgttaatttcagagaagtaattgacaaaacttacaatttcaggaggataattgcctatttactca 42260406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 22524365 - 22524323
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  22524365 ttttgttaatttcagaaagataattgacgaaacttacaatttc 22524323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 22731868 - 22731934
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    |||||||||||||| ||  |||||||| |||||||||||||||||   ||||||| |||||||||||    
T  22731868 ttttgttaatttcaagggggtaattgatgaaacttacaatttcgggggaaaattgactatttactca 22731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 30288722 - 30288680
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  30288722 ttttgttaatttcaggagggtaattgacgaaacttacaatttc 30288680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 30317624 - 30317582
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  30317624 ttttgttaatttcaggagggtaattgacgaaacttacaatttc 30317582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 36111544 - 36111502
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  36111544 ttttgttaatttcagagaggtaattgacgaaacttacaatttc 36111502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 42259344 - 42259278
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||| ||||||||| | ||||||||||||||||||||||||  |  || |||||||| |||||||||    
T  42259344 ttttattaatttcaaggagtaattgacgaaacttacaattttagggaataattgtctgtttactcaa 42259278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 55497294 - 55497336
Alignment:
Q  94 ttttgttaatttcaggaa-gtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  55497294 ttttgttaatttcaagaaagtaattgacgaaacttacaatttc 55497336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 1613510 - 1613469
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  1613510 ttttgttaattttaggaggtaattgaagaaacttacaatttc 1613469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 4939919 - 4939878
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  4939919 ttttgttaatttcaaggggtaattgacgaaacttacaatttc 4939878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 13994539 - 13994584
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||    
T  13994539 aaattttgttaatttcagggaggtaattgatgaaacttacaatttc 13994584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 17215000 - 17214959
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  17215000 ttttgttaatttcaaggaataattgacgaaacttacaatttc 17214959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 17606967 - 17606926
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  17606967 ttttgttaatttcagggggtaattgatgaaacttacaatttc 17606926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 21312222 - 21312263
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||| |||||||||||||||||    
T  21312222 ttttgttaatttcagggggtaattaacgaaacttacaatttc 21312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 23465674 - 23465633
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  23465674 ttttgttaatttcagggggtaattgatgaaacttacaatttc 23465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 23475941 - 23475982
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  23475941 ttttgttaatttcagggggtaattgatgaaacttacaatttc 23475982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 23591276 - 23591317
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaattt 134  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  23591276 ttttgttaatttcagggaggtaattgacgaaacttacaattt 23591317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 32860687 - 32860728
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  32860687 ttttgttaatttcagggggtaattgatgaaacttacaatttc 32860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 37687810 - 37687851
Alignment:
Q  95 tttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  37687810 tttgttaatttcaggaagataattaacgaaacttacaatttc 37687851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 38350394 - 38350353
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  38350394 ttttgttaatttcagggggtaattgacaaaacttacaatttc 38350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 40278308 - 40278267
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || |||||||||||||| |||||||||    
T  40278308 ttttgttaatttcatgaggtaattgacgaaacctacaatttc 40278267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 42342634 - 42342675
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  42342634 ttttgttaatttcaggggagtaattgacgaaacttacaattt 42342675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 48084043 - 48084088
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||||| | | |||||||||||||||||||||||    
T  48084043 aaattttgttaatttcagaagggtaattgacgaaacttacaatttc 48084088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 55082498 - 55082457
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  55082498 ttttgttaatttcaggggataattgacgaaacttacaatttc 55082457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 15031860 - 15031900
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||   ||||||||||||||||||||||    
T  15031860 ttttgttaatttcaggggataattgacgaaacttacaattt 15031900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 29762454 - 29762494
Alignment:
Q  98 gttaatttcag-gaagtaattgacgaaacttacaatttcgg 137  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  29762454 gttaatttcagaggagtaattgacgaaacttacaatttcgg 29762494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 50605255 - 50605323
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||| | ||||||| ||||||||||||||| ||   ||||||| ||||||||||||    
T  50605255 ttttgttaatttcaggagggtaattgatgaaacttacaatttcagggggaaaattgactatttactcaa 50605323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 56279832 - 56279788
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcgg 137  Q
    |||||||||||||| || | |||||||||||||||||||||||||    
T  56279832 ttttgttaatttcaagagggtaattgacgaaacttacaatttcgg 56279788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 9474830 - 9474764
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||| ||  |||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  9474830 ttttgttaatttcgggg-gtaattgacgaaacttacaatttcaggatagaaattgactatttactcaa 9474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 5339934 - 5339868
Alignment:
Q  94 ttttgttaatttca-ggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactca 159  Q
    |||||||||||||| ||  |||||||||||||||||||||||| ||   ||||||||||||||||||    
T  5339934 ttttgttaatttcacggtggtaattgacgaaacttacaatttcagagggaaattgtctatttactca 5339868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 748697 - 748656
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  748697 ttttgttaatttcaggaggtaattgatgaaacttacaatttc 748656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 15191851 - 15191787
Alignment:
Q  95 tttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||||  |||||||||||||| ||||||||| |||  ||||||| ||||||||||    
T  15191851 tttgttaatttcagggggtaattgacgaaacctacaatttcaggaggaaaattgactatttactc 15191787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 15468700 - 15468764
Alignment:
Q  95 tttgttaatttcaggaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactc 158  Q
    |||||||||||||||  |||||||||||||| ||||||||| |||  ||||||| ||||||||||    
T  15468700 tttgttaatttcagggggtaattgacgaaacctacaatttcaggaggaaaattgactatttactc 15468764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 34658552 - 34658620
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    |||||||||||||| || | ||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  34658552 ttttgttaatttcaagatgataattgacgaaacttacaatttcaggggaaaaattgactatttactcaa 34658620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 10624522 - 10624480
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  10624522 ttttgttaatttcaggagagtaatcgacgaaacttacaatttc 10624480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 23074365 - 23074323
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  23074365 ttttgttaatttcaggggagtaattgacgaaacttacaatttc 23074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 29724147 - 29724189
Alignment:
Q  94 ttttgttaatttc-aggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  29724147 ttttgttaatttcgagggagtaattgacgaaacttacaatttc 29724189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1050912 - 1050953
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||||||| ||||||||||    
T  1050912 ttttgttaatttcagggggtaattgacgaaatttacaatttc 1050953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 2318501 - 2318542
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  2318501 ttttgttaatttcagggggtaattgatgaaacttacaatttc 2318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 8743110 - 8743151
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  8743110 ttttgttaatttcagggggtaattgatgaaacttacaatttc 8743151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 13209890 - 13209931
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  13209890 ttttgttaatttcagggggtaattgatgaaacttacaatttc 13209931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 15127736 - 15127777
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  15127736 ttttgttaatttcagggggtaattgatgaaacttacaatttc 15127777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 18739347 - 18739388
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  18739347 ttttgttaatttcagggggtaattgatgaaacttacaatttc 18739388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25404891 - 25404932
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  25404891 ttttgttaatttcagggggtaattgatgaaacttacaatttc 25404932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 5400880 - 5400924
Alignment:
Q  91 aaattttgttaatttcagga-agtaattgacgaaacttacaattt 134  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||    
T  5400880 aaattttgttaatttcaggggagtaattgatgaaacttacaattt 5400924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 14432022 - 14432065
Alignment:
Q  94 ttttgttaatttcag--gaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||  | |||||||||||||||||||||||||    
T  14432022 ttttgttaatttcagagggagtaattgacgaaacttacaatttc 14432065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 41391 - 41349
Alignment:
Q  94 ttttgttaatttcagg-aagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  41391 ttttgttaatttcagggaagtaattgacgaaacttacaatttc 41349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 3364086 - 3364128
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  3364086 ttttgttaatttcaggaaggtaattgacgaaacttacaatttc 3364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 44747013 - 44746972
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  44747013 ttttgttaatttcaagaggtaattgacgaaacttacaatttc 44746972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 3362755 - 3362715
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  3362755 ttttgttaatttcatgaggtaattgacgaaacttacaattt 3362715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 28149930 - 28149886
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||||  |||||||||||||| |||||||||    
T  28149930 aaattttgttaatttcagggggtaattgacgaaacctacaatttc 28149886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 28636169 - 28636126
Alignment:
Q  93 attttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  28636169 attttgttaattttaggaaggtaattgacgaaacttacaatttc 28636126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 5439086 - 5439128
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  5439086 ttttgttaatttcagggaggtaattgacgaaacttacaatttc 5439128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 5607586 - 5607624
Alignment:
Q  98 gttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  5607586 gttaatttcaggagagtaattgacgaaacttacaatttc 5607624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 12177997 - 12177927
Alignment:
Q  91 aaattttgttaatttcag-gaagtaattgacgaaacttacaatttc-ggataaaaattgtctatttactca 159  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| | | |||||||| |||||||||||    
T  12177997 aaattttgttaatttcagaggggtaattgatgaaacttacaatttcagaagaaaaattgactatttactca 12177927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 33869691 - 33869649
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  33869691 ttttgttaatttcaggaaggtaattgatgaaacttacaatttc 33869649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 38935786 - 38935744
Alignment:
Q  94 ttttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  38935786 ttttgttaatttcaggggagtaattgacgaaacttacaatttc 38935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44748020 - 44748062
Alignment:
Q  94 ttttgttaatttcag-gaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  44748020 ttttgttaatttcagaggagtaattgacgaaacttacaatttc 44748062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 6731437 - 6731478
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||||||||| |||| | ||||||||||||||||||||||||    
T  6731437 ttttgttaatgtcagaaggtaattgacgaaacttacaatttc 6731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 7338883 - 7338948
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  | |||||||||||||||||||||||||     ||||||||||||||||    
T  7338883 ttttgttaatttcaggggggtaattgacgaaacttacaatttcgggaggtaattgtctatttactc 7338948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 7531970 - 7531905
Alignment:
Q  93 attttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttac 156  Q
    ||||||||||||| |||  | ||||||||||||||||||||||| |||||| ||||| ||||||||    
T  7531970 attttgttaattttagggggataattgacgaaacttacaatttcaggataacaattgactatttac 7531905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 7778548 - 7778593
Alignment:
Q  91 aaattttgttaatttcaggaag-taattgacgaaacttacaatttc 135  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||    
T  7778548 aaattttgttaattttaggagggtaattgacgaaacttacaatttc 7778593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 9758349 - 9758308
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  9758349 ttttgttaatttcaggggataattgacgaaacttacaatttc 9758308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 26368140 - 26368181
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  26368140 ttttgttaatttcagggggtaattgatgaaacttacaatttc 26368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 28242682 - 28242637
Alignment:
Q  91 aaattttgttaatttcagga-agtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||    
T  28242682 aaattttgttaattttaggagagtaattgatgaaacttacaatttc 28242637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 35059259 - 35059300
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  35059259 ttttgttaatttcagggggtaattgacaaaacttacaatttc 35059300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 43130086 - 43130127
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||||||||| |||||||||    
T  43130086 ttttgttaatttcagggggtaattgacgaaacctacaatttc 43130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 43209096 - 43209137
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||    
T  43209096 ttttgttaatttcagggggtaattgatgaaacttacaatttc 43209137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 45160381 - 45160422
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    |||| |||||||| || |||||||||||||||||||||||||    
T  45160381 ttttattaatttcggggagtaattgacgaaacttacaatttc 45160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 18736703 - 18736659
Alignment:
Q  91 aaattttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||||||||    |||||||||||||||||||||||    
T  18736703 aaattttgttaatttcagaggataattgacgaaacttacaatttc 18736659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 21540369 - 21540329
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  21540369 ttttgttaatttcagggggtaattaacgaaacttacaattt 21540329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 27481307 - 27481263
Alignment:
Q  91 aaattttgttaatttca-ggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  27481307 aaattttgttaatttcatgggggtaattgacgaaacttacaattt 27481263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 29366591 - 29366634
Alignment:
Q  94 ttttgttaatttcaggaa--gtaattgacgaaacttacaatttc 135  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  29366591 ttttgttaatttcaggataggtaattgacgaaacttacaatttc 29366634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 44258052 - 44257984
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    ||||||||||||||||  | ||||||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  44258052 ttttgttaatttcaggggggtaattgatgaaacttacaatttcaggggaaaaattgactatttactcaa 44257984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1903 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1903
Description:

Target: scaffold1903; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 1252 - 1200
Alignment:
Q  108 ggaagtaattgacgaaacttacaatttcggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||||||||||||||| |   ||||||| ||||||||||||    
T  1252 ggaagtaattgacgaaacttacaatttcaggagaaaattgactatttactcaa 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25550 - 25592
Alignment:
Q  94 ttttgttaatttc-aggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  25550 ttttgttaatttcgagggagtaattgacgaaacttacaatttc 25592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 95028 - 95070
Alignment:
Q  93 attttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||||||| |||  ||||||||||||||||||||||||    
T  95028 attttgttaattttagggggtaattgacgaaacttacaatttc 95070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 12192 - 12127
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||| ||  ||||||| ||||||||||    
T  12192 ttttgttaatttcaggaggttaattaacgaaacctacaatttcagaggaaaattgactatttactc 12127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 13198 - 13234
Alignment:
Q  94 ttttgttaatttcagg-aagtaattgacgaaacttac 129  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13198 ttttgttaatttcagggaagtaattgacgaaacttac 13234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 46573 - 46532
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaatttc 135  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  46573 ttttgttaagttcagggggtaattgacgaaacttacaatttc 46532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 130946 - 130881
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttcggataaaaattgtctatttactc 158  Q
    ||||||||||||||||  | ||||||||||||||||||||||| ||   |||||| ||||||||||    
T  130946 ttttgttaatttcaggggggtaattgacgaaacttacaatttcagagggaaattgactatttactc 130881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 5343 - 5303
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||| ||  |||||||||||||||||||||||    
T  5343 ttttgttaatttcggggggtaattgacgaaacttacaattt 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 10193 - 10125
Alignment:
Q  94 ttttgttaatttcaggaag-taattgacgaaacttacaatttc-ggataaaaattgtctatttactcaa 160  Q
    |||||||||||||||| || ||||||| ||||||||||||||| ||  | |||||| ||||||||||||    
T  10193 ttttgttaatttcagggaggtaattgatgaaacttacaatttcaggggagaaattgactatttactcaa 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 42134 - 42094
Alignment:
Q  94 ttttgttaatttcaggaagtaattgacgaaacttacaattt 134  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  42134 ttttgttaatttcagggggtaattgatgaaacttacaattt 42094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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