View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5781-Insertion-12 (Length: 137)
Name: NF5781-Insertion-12
Description: NF5781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5781-Insertion-12 |
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Alignment Details
Target: chr2 (Bit Score: 84; Significance: 3e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 37863749 - 37863631
Alignment:
| Q |
8 |
gttgcaccttgcaagtatcacaacgtcaacataaattattattnnnnnnnnnctcacaacaatagcgagtaaattctgaaaattgtaatcagtcttattc |
107 |
Q |
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| T |
37863749 |
gttgcaccttgcaagaatcacaacgtcaacataaattattattaaaaaaaaactcacaacaatagcgagtaaattctgaaaattgtaattagtcttattc |
37863650 |
T |
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| Q |
108 |
tttcttcacccacacccac |
126 |
Q |
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||||||||||||||||||| |
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| T |
37863649 |
tttcttcacccacacccac |
37863631 |
T |
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