View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5781-Insertion-9 (Length: 166)
Name: NF5781-Insertion-9
Description: NF5781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5781-Insertion-9 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 6e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 6e-85
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 48151096 - 48150938
Alignment:
| Q |
8 |
ctttcttcctttttacacatttcataaacaaatagcaatatgttgatgatgcatgagcatctatgaacatgagggtggggtactaagatcataatctagg |
107 |
Q |
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| T |
48151096 |
ctttcttcctttttacacatttcataaacaaatagcaatatgttgatgatgcatgagcatctatgaacatgagggtggggtactaagatcataatctagg |
48150997 |
T |
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| Q |
108 |
gtatgagtcctaaaacttaaccccacttccttcacacagtacagtttgtaagttgtgac |
166 |
Q |
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| T |
48150996 |
gtatgagtcctaaaacttaaccccacttccttcacacagtacagtttgtaagttgtgac |
48150938 |
T |
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