View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5782_high_2 (Length: 746)

Name: NF5782_high_2
Description: NF5782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5782_high_2
NF5782_high_2
[»] chr8 (51 HSPs)
chr8 (16-733)||(18321932-18322650)
chr8 (644-733)||(18679100-18679189)
chr8 (644-733)||(18718289-18718378)
chr8 (643-733)||(15336864-15336956)
chr8 (643-733)||(15425929-15426021)
chr8 (643-733)||(15517233-15517325)
chr8 (643-733)||(19942517-19942611)
chr8 (643-733)||(25163353-25163446)
chr8 (643-735)||(9319854-9319946)
chr8 (643-717)||(13431411-13431487)
chr8 (643-723)||(23185531-23185615)
chr8 (490-595)||(11755405-11755511)
chr8 (643-733)||(20256288-20256381)
chr8 (643-716)||(14990272-14990342)
chr8 (687-733)||(17526512-17526558)
chr8 (651-700)||(20383162-20383211)
chr8 (643-700)||(30422242-30422299)
chr8 (643-700)||(43639036-43639093)
chr8 (643-733)||(18771975-18772067)
chr8 (489-594)||(37232106-37232213)
chr8 (643-733)||(15934437-15934527)
chr8 (643-690)||(16206513-16206560)
chr8 (643-714)||(14990885-14990957)
chr8 (643-700)||(18121943-18122001)
chr8 (642-716)||(36104625-36104698)
chr8 (476-593)||(14180429-14180546)
chr8 (643-700)||(17796699-17796756)
chr8 (643-700)||(22673058-22673114)
chr8 (643-690)||(17442669-17442716)
chr8 (644-716)||(45292129-45292203)
chr8 (651-733)||(16682029-16682114)
chr8 (672-733)||(19957113-19957177)
chr8 (489-594)||(31431016-31431122)
chr8 (646-698)||(1744480-1744533)
chr8 (692-733)||(12758512-12758553)
chr8 (692-733)||(16206605-16206646)
chr8 (535-576)||(16591160-16591201)
chr8 (692-733)||(18121884-18121925)
chr8 (643-700)||(18152516-18152572)
chr8 (692-733)||(20383113-20383154)
chr8 (643-700)||(22662353-22662409)
chr8 (692-733)||(26832410-26832451)
chr8 (643-700)||(40846215-40846272)
chr8 (489-569)||(2813456-2813536)
chr8 (643-716)||(6407042-6407116)
chr8 (692-728)||(19153368-19153404)
chr8 (646-686)||(23264453-23264493)
chr8 (476-572)||(32856232-32856327)
chr8 (650-700)||(21932165-21932215)
chr8 (534-576)||(26079607-26079649)
chr8 (643-689)||(45539307-45539353)
[»] chr4 (54 HSPs)
chr4 (643-728)||(23749811-23749896)
chr4 (644-733)||(55379598-55379687)
chr4 (643-733)||(19665651-19665742)
chr4 (643-733)||(23120823-23120914)
chr4 (652-733)||(14605639-14605720)
chr4 (643-700)||(13576915-13576972)
chr4 (643-700)||(22676327-22676384)
chr4 (643-723)||(29120653-29120732)
chr4 (643-716)||(3106169-3106240)
chr4 (455-576)||(6008414-6008535)
chr4 (642-733)||(8686177-8686267)
chr4 (643-700)||(17246895-17246952)
chr4 (486-594)||(40217889-40217998)
chr4 (643-715)||(3500402-3500477)
chr4 (643-716)||(22190131-22190206)
chr4 (649-723)||(8103580-8103651)
chr4 (678-733)||(29681250-29681305)
chr4 (678-733)||(37986346-37986401)
chr4 (644-719)||(19621730-19621813)
chr4 (639-711)||(16847668-16847741)
chr4 (644-700)||(16852758-16852815)
chr4 (643-700)||(17399447-17399504)
chr4 (643-700)||(54679146-54679203)
chr4 (490-589)||(4776084-4776184)
chr4 (643-690)||(24628674-24628721)
chr4 (452-523)||(49195937-49196008)
chr4 (651-733)||(6640983-6641062)
chr4 (643-700)||(15135004-15135062)
chr4 (678-733)||(16631760-16631817)
chr4 (646-704)||(27189410-27189467)
chr4 (643-723)||(37436277-37436354)
chr4 (643-700)||(56033813-56033873)
chr4 (643-700)||(10071789-10071846)
chr4 (661-727)||(15475887-15475955)
chr4 (692-733)||(19884069-19884110)
chr4 (651-726)||(15560563-15560644)
chr4 (543-594)||(28101750-28101802)
chr4 (651-733)||(22089575-22089663)
chr4 (643-690)||(44397494-44397541)
chr4 (651-733)||(45832677-45832764)
chr4 (534-576)||(4110102-4110144)
chr4 (650-692)||(10072182-10072224)
chr4 (534-576)||(45662012-45662054)
chr4 (646-700)||(55731118-55731172)
chr4 (692-733)||(3394986-3395027)
chr4 (692-733)||(11900527-11900568)
chr4 (644-700)||(12600041-12600098)
chr4 (692-733)||(14357695-14357736)
chr4 (643-698)||(14905092-14905149)
chr4 (643-700)||(16939263-16939319)
chr4 (692-733)||(17246966-17247007)
chr4 (692-733)||(22676256-22676297)
chr4 (538-594)||(44987599-44987656)
chr4 (488-569)||(47724570-47724650)
[»] chr5 (43 HSPs)
chr5 (643-733)||(6498601-6498692)
chr5 (642-728)||(21075946-21076034)
chr5 (643-700)||(23880299-23880356)
chr5 (643-733)||(7746452-7746546)
chr5 (643-733)||(6513189-6513280)
chr5 (646-733)||(9399374-9399460)
chr5 (651-728)||(22000790-22000869)
chr5 (643-716)||(35932781-35932856)
chr5 (651-700)||(19546323-19546372)
chr5 (488-576)||(8229500-8229588)
chr5 (644-733)||(643458-643546)
chr5 (646-733)||(17814253-17814343)
chr5 (643-733)||(23413732-23413826)
chr5 (643-704)||(10848058-10848119)
chr5 (643-700)||(31487495-31487552)
chr5 (485-576)||(2627779-2627870)
chr5 (643-698)||(31146398-31146453)
chr5 (646-723)||(37395457-37395534)
chr5 (689-733)||(26766593-26766637)
chr5 (644-700)||(30742227-30742283)
chr5 (644-695)||(12353661-12353712)
chr5 (643-698)||(35987019-35987074)
chr5 (694-733)||(39799598-39799637)
chr5 (646-700)||(33932557-33932611)
chr5 (643-692)||(90234-90283)
chr5 (495-594)||(7057334-7057435)
chr5 (643-723)||(11993175-11993258)
chr5 (643-696)||(28138885-28138937)
chr5 (643-700)||(29139216-29139272)
chr5 (692-732)||(16606854-16606894)
chr5 (643-733)||(31117162-31117258)
chr5 (643-690)||(3246266-3246313)
chr5 (643-733)||(13546279-13546377)
chr5 (646-700)||(26783627-26783682)
chr5 (643-723)||(33021946-33022032)
chr5 (643-692)||(13736907-13736956)
chr5 (692-733)||(21100461-21100502)
chr5 (692-733)||(21207534-21207575)
chr5 (661-727)||(21659518-21659586)
chr5 (661-715)||(23407421-23407477)
chr5 (692-733)||(25097584-25097625)
chr5 (643-700)||(28465141-28465197)
chr5 (692-733)||(31487576-31487617)
[»] chr7 (77 HSPs)
chr7 (643-728)||(19328795-19328881)
chr7 (643-733)||(21284153-21284245)
chr7 (643-733)||(4832104-4832195)
chr7 (643-733)||(41843203-41843293)
chr7 (644-735)||(13473258-13473357)
chr7 (643-733)||(13681582-13681673)
chr7 (644-733)||(30025222-30025313)
chr7 (643-733)||(15087840-15087929)
chr7 (643-733)||(29936124-29936216)
chr7 (643-733)||(4820772-4820865)
chr7 (651-733)||(10883950-10884033)
chr7 (643-733)||(13645738-13645829)
chr7 (643-700)||(12367571-12367628)
chr7 (643-733)||(16315317-16315408)
chr7 (643-700)||(9710648-9710705)
chr7 (646-733)||(14186976-14187067)
chr7 (646-733)||(33604194-33604285)
chr7 (644-700)||(5001676-5001732)
chr7 (645-700)||(11792159-11792215)
chr7 (644-700)||(16317410-16317466)
chr7 (678-733)||(9069083-9069138)
chr7 (678-733)||(13302184-13302239)
chr7 (643-723)||(14424594-14424678)
chr7 (643-700)||(13259257-13259314)
chr7 (643-728)||(13731459-13731547)
chr7 (646-717)||(12175133-12175202)
chr7 (643-690)||(13138749-13138796)
chr7 (643-723)||(28623149-28623224)
chr7 (674-716)||(330970-331012)
chr7 (535-576)||(7858216-7858257)
chr7 (692-733)||(11318742-11318783)
chr7 (644-700)||(13034666-13034723)
chr7 (643-692)||(13261497-13261546)
chr7 (661-727)||(19711796-19711864)
chr7 (646-716)||(27871007-27871079)
chr7 (643-700)||(33692536-33692593)
chr7 (643-700)||(48237649-48237706)
chr7 (646-723)||(16155529-16155608)
chr7 (644-723)||(16546125-16546207)
chr7 (644-723)||(16619455-16619537)
chr7 (643-698)||(48063627-48063682)
chr7 (692-726)||(2914397-2914431)
chr7 (646-692)||(16310777-16310823)
chr7 (646-700)||(16911696-16911750)
chr7 (678-733)||(24787682-24787739)
chr7 (692-733)||(4493912-4493953)
chr7 (692-733)||(5001605-5001646)
chr7 (692-733)||(13027678-13027719)
chr7 (692-733)||(13034617-13034658)
chr7 (692-733)||(13879507-13879548)
chr7 (643-700)||(14424801-14424858)
chr7 (643-733)||(15467202-15467296)
chr7 (643-700)||(15705308-15705365)
chr7 (646-715)||(19340045-19340117)
chr7 (692-733)||(21211323-21211364)
chr7 (486-594)||(43728252-43728361)
chr7 (644-700)||(44466368-44466425)
chr7 (692-733)||(44466431-44466472)
chr7 (672-735)||(26042727-26042787)
chr7 (642-700)||(2266376-2266435)
chr7 (690-733)||(13138675-13138718)
chr7 (533-576)||(47843501-47843544)
chr7 (692-726)||(9099016-9099050)
chr7 (692-726)||(9099822-9099856)
chr7 (643-700)||(13879430-13879487)
chr7 (672-717)||(14304613-14304661)
chr7 (646-716)||(21382224-21382297)
chr7 (692-733)||(2499400-2499441)
chr7 (692-733)||(11792247-11792288)
chr7 (692-733)||(12367516-12367557)
chr7 (692-729)||(13902395-13902432)
chr7 (692-733)||(16317333-16317374)
chr7 (644-700)||(22580067-22580124)
chr7 (643-692)||(30946228-30946277)
chr7 (643-700)||(35954725-35954782)
chr7 (692-733)||(39285282-39285323)
chr7 (543-572)||(47278272-47278301)
[»] chr2 (45 HSPs)
chr2 (643-733)||(26367130-26367220)
chr2 (643-733)||(21537908-21538000)
chr2 (644-733)||(22316881-22316970)
chr2 (455-594)||(7018151-7018291)
chr2 (643-733)||(10010474-10010563)
chr2 (646-733)||(19539703-19539794)
chr2 (643-733)||(39038364-39038453)
chr2 (643-733)||(22455682-22455772)
chr2 (643-716)||(16494633-16494708)
chr2 (644-728)||(22188830-22188919)
chr2 (643-733)||(28141324-28141415)
chr2 (651-700)||(24778626-24778675)
chr2 (643-716)||(44839719-44839794)
chr2 (643-716)||(22801761-22801832)
chr2 (646-733)||(38780686-38780775)
chr2 (643-716)||(40331400-40331471)
chr2 (643-692)||(24851436-24851485)
chr2 (651-733)||(20569473-20569554)
chr2 (651-727)||(24575327-24575406)
chr2 (643-733)||(25188689-25188776)
chr2 (643-704)||(1587787-1587847)
chr2 (643-716)||(28551658-28551734)
chr2 (644-716)||(34322671-34322741)
chr2 (643-716)||(40331075-40331148)
chr2 (643-700)||(40780596-40780653)
chr2 (644-700)||(22782388-22782444)
chr2 (490-594)||(26352922-26353025)
chr2 (643-715)||(22786395-22786469)
chr2 (485-576)||(40498832-40498922)
chr2 (677-724)||(27296764-27296813)
chr2 (486-576)||(40364020-40364110)
chr2 (470-511)||(13085226-13085267)
chr2 (692-733)||(24838442-24838483)
chr2 (692-733)||(25828499-25828540)
chr2 (494-594)||(35429179-35429280)
chr2 (649-708)||(45087744-45087804)
chr2 (643-717)||(6391953-6392024)
chr2 (486-576)||(17329063-17329153)
chr2 (643-700)||(17964058-17964116)
chr2 (643-689)||(28701991-28702037)
chr2 (646-700)||(31968532-31968586)
chr2 (678-733)||(38631072-38631131)
chr2 (692-733)||(23234346-23234387)
chr2 (700-733)||(24376451-24376484)
chr2 (692-733)||(26623176-26623217)
[»] chr3 (70 HSPs)
chr3 (643-733)||(29952213-29952305)
chr3 (643-733)||(30001367-30001459)
chr3 (452-576)||(45472808-45472932)
chr3 (644-733)||(13823360-13823449)
chr3 (643-728)||(25399036-25399123)
chr3 (643-726)||(22804806-22804889)
chr3 (643-733)||(41494291-41494381)
chr3 (651-732)||(20645451-20645535)
chr3 (643-733)||(6090017-6090109)
chr3 (643-735)||(38178417-38178513)
chr3 (643-717)||(2025381-2025455)
chr3 (643-728)||(14968658-14968741)
chr3 (643-700)||(19885889-19885946)
chr3 (659-733)||(12963862-12963938)
chr3 (643-733)||(17239699-17239797)
chr3 (643-733)||(2560474-2560568)
chr3 (643-714)||(30054975-30055044)
chr3 (643-700)||(14393806-14393863)
chr3 (659-733)||(3237998-3238074)
chr3 (643-716)||(40850267-40850342)
chr3 (643-733)||(31302638-31302731)
chr3 (643-723)||(47406209-47406285)
chr3 (646-713)||(50299530-50299597)
chr3 (646-726)||(12727019-12727101)
chr3 (643-717)||(49669281-49669354)
chr3 (643-700)||(19889750-19889807)
chr3 (643-733)||(22128375-22128460)
chr3 (643-717)||(46797188-46797263)
chr3 (643-723)||(52283084-52283161)
chr3 (646-700)||(1241886-1241940)
chr3 (678-733)||(13781363-13781420)
chr3 (678-733)||(13939221-13939278)
chr3 (643-700)||(20628273-20628330)
chr3 (643-728)||(49643544-49643632)
chr3 (643-723)||(53057516-53057593)
chr3 (692-732)||(6174677-6174717)
chr3 (644-700)||(21640128-21640184)
chr3 (646-698)||(22463846-22463898)
chr3 (646-698)||(22465304-22465356)
chr3 (643-691)||(40799179-40799227)
chr3 (651-728)||(8874902-8874985)
chr3 (653-700)||(28581380-28581427)
chr3 (643-694)||(47206952-47207003)
chr3 (485-590)||(52203670-52203774)
chr3 (646-700)||(2782778-2782832)
chr3 (646-700)||(2783168-2783222)
chr3 (646-704)||(9700847-9700904)
chr3 (643-700)||(11189282-11189340)
chr3 (643-700)||(18122458-18122516)
chr3 (643-689)||(24776334-24776380)
chr3 (643-700)||(21639094-21639150)
chr3 (489-570)||(51257724-51257805)
chr3 (644-733)||(15902485-15902578)
chr3 (692-726)||(10849932-10849966)
chr3 (643-700)||(16031792-16031850)
chr3 (692-726)||(18122396-18122430)
chr3 (537-594)||(39614797-39614855)
chr3 (646-698)||(1728829-1728882)
chr3 (692-733)||(6252762-6252803)
chr3 (643-700)||(11222085-11222141)
chr3 (643-700)||(11222837-11222893)
chr3 (651-733)||(12967610-12967690)
chr3 (692-733)||(13410814-13410855)
chr3 (692-733)||(19885832-19885873)
chr3 (692-725)||(19889697-19889730)
chr3 (490-527)||(26016118-26016155)
chr3 (692-733)||(26418453-26418494)
chr3 (692-733)||(28581447-28581488)
chr3 (643-733)||(46350623-46350709)
chr3 (643-680)||(49554341-49554378)
[»] chr6 (43 HSPs)
chr6 (643-728)||(20113408-20113495)
chr6 (643-723)||(16876195-16876276)
chr6 (651-733)||(19623282-19623362)
chr6 (643-723)||(22801430-22801512)
chr6 (489-595)||(8486266-8486371)
chr6 (643-733)||(21624379-21624474)
chr6 (643-714)||(19066803-19066876)
chr6 (643-725)||(13435172-13435260)
chr6 (449-576)||(2987913-2988040)
chr6 (643-728)||(15986649-15986731)
chr6 (643-733)||(16528602-16528693)
chr6 (651-733)||(25929779-25929861)
chr6 (646-700)||(21234446-21234500)
chr6 (678-733)||(25593394-25593451)
chr6 (643-700)||(16333016-16333073)
chr6 (643-700)||(20731511-20731568)
chr6 (643-700)||(24116105-24116162)
chr6 (643-733)||(29917325-29917410)
chr6 (643-700)||(32543550-32543607)
chr6 (643-733)||(13601454-13601549)
chr6 (678-733)||(15301541-15301598)
chr6 (643-700)||(19952390-19952448)
chr6 (643-700)||(22077177-22077233)
chr6 (643-700)||(33353052-33353109)
chr6 (692-728)||(26941777-26941813)
chr6 (643-690)||(18377714-18377761)
chr6 (678-733)||(14732884-14732941)
chr6 (643-717)||(21617540-21617613)
chr6 (646-715)||(18912704-18912776)
chr6 (643-700)||(19085419-19085476)
chr6 (692-733)||(23296128-23296169)
chr6 (692-733)||(25591964-25592005)
chr6 (692-728)||(18434880-18434916)
chr6 (692-728)||(19085500-19085536)
chr6 (644-700)||(19688021-19688076)
chr6 (643-690)||(12041148-12041195)
chr6 (643-690)||(12422528-12422575)
chr6 (643-700)||(15532434-15532492)
chr6 (643-689)||(17380850-17380896)
chr6 (692-733)||(14101204-14101245)
chr6 (692-733)||(17876783-17876824)
chr6 (692-733)||(19625152-19625193)
chr6 (692-733)||(32335184-32335225)
[»] scaffold0334 (1 HSPs)
scaffold0334 (643-733)||(7184-7276)
[»] scaffold0035 (2 HSPs)
scaffold0035 (643-733)||(20197-20287)
scaffold0035 (643-700)||(110358-110414)
[»] chr1 (47 HSPs)
chr1 (646-733)||(10756723-10756806)
chr1 (645-733)||(26702828-26702917)
chr1 (643-733)||(22600884-22600978)
chr1 (643-700)||(23037258-23037315)
chr1 (643-729)||(1899634-1899725)
chr1 (644-717)||(44824473-44824544)
chr1 (647-733)||(2833947-2834039)
chr1 (643-717)||(21121778-21121854)
chr1 (643-717)||(21983886-21983962)
chr1 (643-716)||(21215391-21215466)
chr1 (643-716)||(46088279-46088354)
chr1 (646-716)||(14264149-14264217)
chr1 (643-733)||(36133498-36133586)
chr1 (533-595)||(16123101-16123163)
chr1 (643-700)||(12283680-12283737)
chr1 (643-716)||(29215087-29215160)
chr1 (643-716)||(21135874-21135949)
chr1 (644-733)||(32786636-32786729)
chr1 (643-698)||(21205596-21205651)
chr1 (643-700)||(1577136-1577194)
chr1 (643-717)||(10250280-10250355)
chr1 (487-576)||(11767467-11767556)
chr1 (643-700)||(30892352-30892409)
chr1 (692-732)||(22465509-22465549)
chr1 (643-733)||(22428036-22428130)
chr1 (643-700)||(2266373-2266430)
chr1 (692-733)||(28492979-28493020)
chr1 (476-569)||(31183803-31183896)
chr1 (692-733)||(33257049-33257090)
chr1 (692-733)||(33277221-33277262)
chr1 (692-733)||(38281907-38281948)
chr1 (643-700)||(48570987-48571044)
chr1 (692-728)||(22202437-22202473)
chr1 (692-728)||(30892435-30892471)
chr1 (489-569)||(50709801-50709880)
chr1 (533-576)||(271319-271362)
chr1 (643-700)||(22153113-22153172)
chr1 (643-700)||(22202493-22202551)
chr1 (643-700)||(22202615-22202673)
chr1 (692-726)||(23053716-23053750)
chr1 (643-689)||(25449333-25449379)
chr1 (553-594)||(2137129-2137170)
chr1 (692-733)||(9346119-9346160)
chr1 (692-733)||(16236004-16236045)
chr1 (643-692)||(30571489-30571537)
chr1 (644-690)||(38281651-38281699)
chr1 (646-687)||(42283933-42283974)
[»] scaffold0217 (2 HSPs)
scaffold0217 (645-726)||(18327-18408)
scaffold0217 (643-692)||(22929-22978)
[»] scaffold0146 (1 HSPs)
scaffold0146 (643-733)||(14403-14501)
[»] scaffold0084 (1 HSPs)
scaffold0084 (680-733)||(31916-31969)
[»] scaffold0161 (2 HSPs)
scaffold0161 (643-733)||(10835-10929)
scaffold0161 (643-733)||(15499-15593)
[»] scaffold0315 (1 HSPs)
scaffold0315 (672-733)||(7983-8042)
[»] scaffold0005 (1 HSPs)
scaffold0005 (652-733)||(211658-211739)
[»] scaffold0607 (1 HSPs)
scaffold0607 (643-716)||(5421-5493)
[»] scaffold0056 (1 HSPs)
scaffold0056 (643-716)||(35490-35565)
[»] scaffold0249 (1 HSPs)
scaffold0249 (643-716)||(18510-18581)
[»] scaffold0205 (1 HSPs)
scaffold0205 (646-700)||(717-771)
[»] scaffold0015 (1 HSPs)
scaffold0015 (486-576)||(38256-38346)
[»] scaffold0622 (1 HSPs)
scaffold0622 (643-726)||(1950-2037)
[»] scaffold0337 (1 HSPs)
scaffold0337 (651-728)||(14264-14344)
[»] scaffold0120 (1 HSPs)
scaffold0120 (643-733)||(37473-37558)
[»] scaffold0065 (1 HSPs)
scaffold0065 (651-728)||(1306-1386)
[»] scaffold0352 (1 HSPs)
scaffold0352 (643-716)||(1564-1639)
[»] scaffold0028 (1 HSPs)
scaffold0028 (647-723)||(24515-24594)
[»] scaffold0488 (1 HSPs)
scaffold0488 (644-716)||(11489-11563)
[»] scaffold0004 (4 HSPs)
scaffold0004 (643-726)||(378283-378373)
scaffold0004 (643-714)||(210693-210765)
scaffold0004 (643-728)||(219527-219618)
scaffold0004 (692-733)||(245008-245049)
[»] scaffold0471 (1 HSPs)
scaffold0471 (642-716)||(2741-2814)
[»] scaffold0359 (2 HSPs)
scaffold0359 (643-700)||(6488-6546)
scaffold0359 (692-733)||(6417-6458)
[»] scaffold0859 (1 HSPs)
scaffold0859 (643-700)||(2258-2315)
[»] scaffold0567 (1 HSPs)
scaffold0567 (692-733)||(9248-9289)
[»] scaffold0290 (1 HSPs)
scaffold0290 (643-700)||(19419-19476)
[»] scaffold0280 (1 HSPs)
scaffold0280 (643-700)||(3448-3505)
[»] scaffold0251 (1 HSPs)
scaffold0251 (645-733)||(7121-7207)
[»] scaffold0171 (1 HSPs)
scaffold0171 (692-733)||(28155-28196)
[»] scaffold0047 (1 HSPs)
scaffold0047 (692-733)||(7971-8012)
[»] scaffold0043 (1 HSPs)
scaffold0043 (643-711)||(79112-79181)
[»] scaffold1281 (1 HSPs)
scaffold1281 (692-732)||(2113-2153)
[»] scaffold0045 (1 HSPs)
scaffold0045 (643-716)||(88345-88420)
[»] scaffold0247 (1 HSPs)
scaffold0247 (646-716)||(16460-16533)
[»] scaffold0007 (2 HSPs)
scaffold0007 (644-723)||(63629-63711)
scaffold0007 (644-723)||(45958-46037)
[»] scaffold0479 (1 HSPs)
scaffold0479 (677-726)||(9290-9340)
[»] scaffold0201 (1 HSPs)
scaffold0201 (692-726)||(18543-18577)
[»] scaffold0115 (1 HSPs)
scaffold0115 (646-700)||(17623-17677)
[»] scaffold0330 (2 HSPs)
scaffold0330 (692-733)||(379-420)
scaffold0330 (659-700)||(446-488)
[»] scaffold0324 (1 HSPs)
scaffold0324 (692-733)||(9299-9340)
[»] scaffold0210 (1 HSPs)
scaffold0210 (692-733)||(1001-1042)
[»] scaffold0040 (1 HSPs)
scaffold0040 (692-733)||(2787-2828)
[»] scaffold0163 (2 HSPs)
scaffold0163 (643-690)||(25717-25765)
scaffold0163 (692-733)||(25802-25843)
[»] scaffold0530 (1 HSPs)
scaffold0530 (682-726)||(2750-2796)
[»] scaffold0069 (1 HSPs)
scaffold0069 (646-704)||(6027-6086)
[»] scaffold0022 (1 HSPs)
scaffold0022 (643-733)||(158435-158528)
[»] scaffold0025 (1 HSPs)
scaffold0025 (692-726)||(73924-73958)
[»] scaffold0023 (2 HSPs)
scaffold0023 (643-700)||(102844-102902)
scaffold0023 (692-726)||(102912-102946)
[»] scaffold0598 (1 HSPs)
scaffold0598 (692-733)||(2508-2549)
[»] scaffold0327 (1 HSPs)
scaffold0327 (692-733)||(7203-7244)
[»] scaffold0026 (1 HSPs)
scaffold0026 (692-733)||(7268-7309)
[»] scaffold0011 (1 HSPs)
scaffold0011 (643-716)||(145194-145270)
[»] scaffold0009 (1 HSPs)
scaffold0009 (643-700)||(83650-83707)


Alignment Details
Target: chr8 (Bit Score: 648; Significance: 0; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 16 - 733
Target Start/End: Complemental strand, 18322650 - 18321932
Alignment:
Q  16 atattaatcaaattttcaatcgtttcaacctttgtaagcaccttgtaagcaagtctggcatgtgattacattcgatgtcggtacgtatctacttataaaa 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18322650 atattaatcaacttttcaatcgtttcaacctttgtaagcaccttgtaagcaagtttggcatgtgattacattcgatgtcggtacgtatctacttataaaa 18322551  T
Q  116 tgtcgaattcaatatcaaatatttgtcatcattacttatgcggtgttatctaactaaaaaagcaatctggctatgaatta-gggtgtttacttttttcaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  18322550 tgtcgaattcaatatcaaatatttgtcatcattacttatgcggtgttatctaactaaaaaagcaatctggctatgaattaagggagttt-cttttttcaa 18322452  T
Q  215 ttgaaattgaaaatggaaaaagcaaagaaggtaatggtgtgaacaaaaatggaaaagtgcactaactcagtgggtcacttcaccaaacccactaacagaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18322451 ttgaaattgaaaatggaaaaagcaaagaaggtaatggtgtgaataaaaatggaaaagtgcactaactcagtgggtcacttcaccaaacccactaacagaa 18322352  T
Q  315 gctgaggacataacaaacaaattatggggaaaatgataattgtagcttcccgtgacaaccatgatgcaagtggctataaaacgtgacatcacatcatatt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18322351 gctgaggacataacaaacaaattatggggaaaatgataattgtagcttcccgtgacaaccatgatgcaagtggctataaaacgtgacatcacatcatatt 18322252  T
Q  415 accttctaactaagaagcccggatgctgatactcgtacgagtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatgg 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  18322251 accttctaactaagaagcccggatgctgatactcgtacgagtacgatgcgatacggataaacggatatataaattttttaaaatttaggatacaatatgg 18322152  T
Q  515 ctaagatatgttagtagg-ttttttatattaaaacttacatgcatgtaaaatacttgaagaaataagcactgattactcttgtttgttagagttctactt 613  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18322151 ctaagatatgttagcaggattttttatattaaaacttatatgcatgtaaaatacttgaagaaataagcattgattactcttgtttgttagagttctactt 18322052  T
Q  614 ctgatcagaagcagaagagttatatttctgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagaca 713  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18322051 ctgatcagaagcagaagagttctatttctgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagaca 18321952  T
Q  714 caaagcaattatacatgttc 733  Q
    ||||| ||||||||||||||    
T  18321951 caaagtaattatacatgttc 18321932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 18679100 - 18679189
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||| ||||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||| ||||    
T  18679100 agttctgcttctgaagtgatgttcagaactaaatgcagcagataaaatagagaaagagagaagaaagacacaaagcaattatacaggttc 18679189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 18718289 - 18718378
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||| ||||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||| ||||    
T  18718289 agttctgcttctgaagtgatgttcagaactaaatgcagcagataaaatagagaaagagagaagaaagacacaaagcaattatacaggttc 18718378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 15336956 - 15336864
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa-cagagagagaaagaagaaagacacaaagcaa-ttatacatgttc 733  Q
    ||||||| ||||||| ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15336956 gagttctgcttctgaagtgatgttcagaactatttgcagcggataaaaacagagagagaaggaagaaagacacaaagcaatttatacatgttc 15336864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 15426021 - 15425929
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa-cagagagagaaagaagaaagacacaaagcaa-ttatacatgttc 733  Q
    ||||||| ||||||| ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15426021 gagttctgcttctgaagtgatgttcagaactatttgcagcggataaaaacagagagagaaggaagaaagacacaaagcaatttatacatgttc 15425929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 15517325 - 15517233
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa-cagagagagaaagaagaaagacacaaagcaa-ttatacatgttc 733  Q
    ||||||| ||||||| ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15517325 gagttctgcttctgaagtgatgttcagaactatttgcagcggataaaaacagagagagaaggaagaaagacacaaagcaatttatacatgttc 15517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 19942517 - 19942611
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||||| | ||||| |||||||    ||||||||||||||||||||||||||||||||||||| ||||    
T  19942517 gagttctacttctgaagtgatgttcaggactaacttgcagccgataaaaacgtagagagagaaagaagaaagacacaaagcaattatacaggttc 19942611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 25163353 - 25163446
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||||||| ||||||| ||||||||||||||    ||||||||||||||||| ||||||||||||||||||| ||||    
T  25163353 gagttctgcttctgaagtgatgttccggactaattgcagcggataaaaacagagagagagaaagaagaacgacacaaagcaattatacaggttc 25163446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 735
Target Start/End: Original strand, 9319854 - 9319946
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaa-ttatacatgttcat 735  Q
    ||||||||||||||| ||||||||||| ||||  |||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||||    
T  9319854 gagttctacttctgaagtgatgttcagaactacttgcagcggat-aaacagagagagagagaagaaagacacaaaacaatttatacaggttcat 9319946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 717
Target Start/End: Complemental strand, 13431487 - 13431411
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  13431487 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacacaaa 13431411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 723
Target Start/End: Complemental strand, 23185615 - 23185531
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaag----aagaaagacacaaagcaatt 723  Q
    ||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||||    ||||||||||||||||||||    
T  23185615 gagttctacttctgaagcgatgttcagaactagatgtagcggataaaacagagagagaaagagaaaagaaagacacaaagcaatt 23185531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 490 - 595
Target Start/End: Original strand, 11755405 - 11755511
Alignment:
Q  490 ttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcactgatt 588  Q
    ||||||||||||||||| ||||  ||||||||| ||||  |  |||||||||||||||||||   ||||||||||||||||||| |||||| || |||||    
T  11755405 ttttaaaatttaggatatgatactgctaagatacgttaacaaattttttatattaaaacttatgcgcatgtaaaatacttgaagaaaataaacattgatt 11755504  T
Q  589 actcttg 595  Q
    |||||||    
T  11755505 actcttg 11755511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 20256381 - 20256288
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga--aagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||  ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  20256381 gagttctgcttctgaagtgatttccaaaactaaatagcagcggataaaacagagagagagaaagaagaaagacacaaagcaattatacaagttc 20256288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 14990342 - 14990272
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||  |||||||||||||||    
T  14990342 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagag--agaagaaagacacaa 14990272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 687 - 733
Target Start/End: Complemental strand, 17526558 - 17526512
Alignment:
Q  687 aaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  17526558 aaaacagagagagaaagaagaaagacacaaagcaattatacaggttc 17526512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 651 - 700
Target Start/End: Complemental strand, 20383211 - 20383162
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  20383211 cttctgaagtgatgttcaggactaaatgcagcggataaaatagagagaga 20383162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 30422299 - 30422242
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||    
T  30422299 gagttctacttctgaagtgatgttctgaactagatgcagcggataaaacagagagaga 30422242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 43639036 - 43639093
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | || |||||| ||||||||||||||||||||||||||||||    
T  43639036 gagttctacttctgaagagaagttcagaactaaatgcagcggataaaacagagagaga 43639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 18771975 - 18772067
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaaaga-agaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||||  |||||||||| | ||||||| ||||||||||||||||||||| ||| ||| ||| |||||||||||||||| ||||    
T  18771975 gagttcaacttctgaattgatgttcagaatctaaatgtagcggataaaacagagagagagagagagagagagacaaagcaattatacaggttc 18772067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 489 - 594
Target Start/End: Complemental strand, 37232213 - 37232106
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatactt--gaagaaataagcactga 586  Q
    ||||||||||| | |||||||||||||||||||| ||||  |   | |||||||||||| ||| |||||||||||||||||   || ||||||||| |||    
T  37232213 tttttaaaattcaagatacgatatggctaagatacgttaacaaaatatttatattaaaatttatatgcatgtaaaatacttaacaaaaaataagcattga 37232114  T
Q  587 ttactctt 594  Q
    ||||||||    
T  37232113 ttactctt 37232106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 15934527 - 15934437
Alignment:
Q  643 gagttctacttctgaggtgatgttcagg-actaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| |||||| | |||||||||||  | |||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||| ||||    
T  15934527 gagttcaacttctaaagtgatgttcagatagtaaatgcaacggataaaa-acagagagagagaagaaagacacaaagcaattatacaggttc 15934437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 16206513 - 16206560
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  16206513 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaa 16206560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 714
Target Start/End: Complemental strand, 14990957 - 14990885
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga--gagaaagaagaaagacac 714  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||||    
T  14990957 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagagagagagaagaaagacac 14990885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 18122001 - 18121943
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||    
T  18122001 gagttctacttctgaagtgatgatcaggactagatgcagcggataaaaacagagagaga 18121943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 716
Target Start/End: Original strand, 36104625 - 36104698
Alignment:
Q  642 tgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    |||||||||||||||| | ||||| ||| ||||| |||||||||||||| | ||||||| |||||||||||||||    
T  36104625 tgagttctacttctgaagagatgtccagaactaattgcagcggataaaa-acagagagagagaagaaagacacaa 36104698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 593
Target Start/End: Complemental strand, 14180546 - 14180429
Alignment:
Q  476 cggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaa 575  Q
    ||||||| ||||||||||||||||||  |||| ||   ||||||||| ||||  |   | |||||| ||||| ||| |||| ||||||||||||||| ||    
T  14180546 cggatatgtaaattttttaaaatttaaaatacaatgctgctaagatacgttaacaaaatatttatactaaaatttatatgcgtgtaaaatacttgaaaaa 14180447  T
Q  576 ataagcactgattactct 593  Q
    ||||||| ||||||||||    
T  14180446 ataagcattgattactct 14180429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 17796699 - 17796756
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||| ||||||||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  17796699 gagttatacttctgaagtgatgttcagaactagttgcagcggataaaacagagagaga 17796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 22673058 - 22673114
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||    
T  22673058 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagaga 22673114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 17442716 - 17442669
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  17442716 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaa 17442669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 716
Target Start/End: Original strand, 45292129 - 45292203
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca--gagagagaaagaagaaagacacaa 716  Q
    |||||||||||||| | ||||||||| |||| |||||||||||||||||  |||| ||| |||||| ||||||||    
T  45292129 agttctacttctgaagagatgttcagaactagatgcagcggataaaacagggagaaagagagaagagagacacaa 45292203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 651 - 733
Target Start/End: Complemental strand, 16682114 - 16682029
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga--aagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||| | ||| ||||||| ||||| |||||||||||||||||  |||| |||||||||||| |||||||||| ||||    
T  16682114 cttctgaagtgatttccagaactaaatagcagcagataaaacagagagagagaaagaggaaagacacaaaacaattatacaagttc 16682029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 733
Target Start/End: Complemental strand, 19957177 - 19957113
Alignment:
Q  672 ctaaatgcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||    |||||| || ||||||||||||||||||||||||||| ||||    
T  19957177 ctaaatgcagcggataaaaatagagagagggagagaagaaagacacaaagcaattatacaggttc 19957113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 594
Target Start/End: Original strand, 31431016 - 31431122
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcactgat 587  Q
    |||| ||||||||||| | |||| | |||| ||| |||| ||   ||| |||| ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  31431016 ttttgaaaatttaggagatgatacgactaaaatacgttaataaaatttgtatactaaaacttatatgcatgtaaaatacttgaagaaaataagcattgat 31431115  T
Q  588 tactctt 594  Q
    || ||||    
T  31431116 taatctt 31431122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 1744480 - 1744533
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagaga 698  Q
    |||||||||||| | ||||||||| |||||||||||||||| ||||||||||||    
T  1744480 ttctacttctgaagagatgttcagaactaaatgcagcggataaaaacagagaga 1744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 12758553 - 12758512
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  12758553 agagagagagagaagaaagacacaaagcaattatacaggttc 12758512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 16206605 - 16206646
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  16206605 agagagagagagaagaaagacacaaagcaattatacaggttc 16206646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 576
Target Start/End: Original strand, 16591160 - 16591201
Alignment:
Q  535 ttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  16591160 ttttataataaaacttatatgcatgtaaaatacttgaagaaa 16591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 18121925 - 18121884
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  18121925 agagagagagagaagaaagacacaaagcaattatacaagttc 18121884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 18152572 - 18152516
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| ||||| || |||||||||||||||||||||    
T  18152572 gagttctacttctgaagagatgttcag-actaattgtagcggataaaacagagagaga 18152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 20383154 - 20383113
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  20383154 agagagagagagaagaaagacacaaagcaattatacaggttc 20383113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 22662353 - 22662409
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| || || ||||||||||||||||||||||||    
T  22662353 gagttctacttctgaagagatgttcag-acaaattgcagcggataaaacagagagaga 22662409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 26832410 - 26832451
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  26832410 agagagagatagaagaaagacacaaagcaattatacaggttc 26832451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 40846272 - 40846215
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||| ||||| ||||| ||||||||| ||||| || |||||||||||||||||||||    
T  40846272 gagttatacttatgaggagatgttcagaactaattgtagcggataaaacagagagaga 40846215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 569
Target Start/End: Original strand, 2813456 - 2813536
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatactt 569  Q
    ||||||||||||||||||||||| ||||||||| |||||  |   | |||||||||||| ||| |||  ||||||||||||    
T  2813456 tttttaaaatttaggatacgatacggctaagatgtgttaacaaaatatttatattaaaatttatatgtgtgtaaaatactt 2813536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 6407042 - 6407116
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--agagaaagaagaaagacacaa 716  Q
    ||||||||||||| | | || |||||| ||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  6407042 gagttctacttctaaagagaagttcag-actaattgcagcggataaaacagagatagagagagaagaaagacacaa 6407116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 728
Target Start/End: Original strand, 19153368 - 19153404
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19153368 agagagagaaataagaaagacacaaagcaattataca 19153404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 686
Target Start/End: Complemental strand, 23264493 - 23264453
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggat 686  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  23264493 ttctacttctgaagtgatgttcaggactagatgcagcggat 23264453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 572
Target Start/End: Complemental strand, 32856327 - 32856232
Alignment:
Q  476 cggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaa 572  Q
    |||||||| |||| ||| |||||||| ||||||||| | |||||||| ||||  |  |||||||| | |||||||| ||| ||||||||||||||||    
T  32856327 cggatatacaaatatttcaaaatttatgatacgatacgactaagatacgttaacaatttttttatct-aaaacttatatgtatgtaaaatacttgaa 32856232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 700
Target Start/End: Original strand, 21932165 - 21932215
Alignment:
Q  650 acttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||| || |||||||| |||| |||||| ||||||||||||||||||    
T  21932165 acttctgaagtaatgttcagaactagatgcagtggataaaacagagagaga 21932215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 576
Target Start/End: Complemental strand, 26079649 - 26079607
Alignment:
Q  534 tttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||    
T  26079649 tttttatactaaaacttatatgaatgtaaaatacttgaagaaa 26079607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 45539353 - 45539307
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa 689  Q
    ||||||||||||||| ||||||||||| || | ||||||||||||||    
T  45539353 gagttctacttctgaagtgatgttcagaacaagatgcagcggataaa 45539307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 23749811 - 23749896
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23749811 gagttctacttctgaagtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattataca 23749896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 55379598 - 55379687
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  55379598 agttctacttctgaagtgatgttcaagactaaatgcagtggataaaacagagagagaaagaagaaagacacaaaacaattatacaggttc 55379687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 19665651 - 19665742
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19665651 gagttcttcttctgaagtgatttccagaactaaatagcagcggataaaacagagagacaaagaagaaagacacaaagcaattatacaggttc 19665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 23120823 - 23120914
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| ||||| | |||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23120823 gagttctgcttctgaagtgatttccagaactaagtagcagtgtataaaacagagagagaaagaagaaagacacaaaacaattatacatgttc 23120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 652 - 733
Target Start/End: Complemental strand, 14605720 - 14605639
Alignment:
Q  652 ttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||||||||| ||| | ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  14605720 ttctgaagtgatgttcaggaataacttgcagcggataaaa-acagagagaaagaagaaagacacaaagcaattatacaagttc 14605639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 13576972 - 13576915
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  13576972 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 13576915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 22676384 - 22676327
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  22676384 gagttctacttttgaagtgatgttcaggactagatgcagcggataaaacagagagaga 22676327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 29120653 - 29120732
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||| || || ||||||| |||||| |||||||||||||||    
T  29120653 gagttctacttctgaagtgatgttcagaactaattgcagcggat-aagcatagagagagagaagagagacacaaagcaatt 29120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 3106240 - 3106169
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||  ||||| |||||||||||||||||||||||  |||||||||||||||    
T  3106240 gagttctacttctgaagagatgttcataactaattgcagcggataaaacagagagag--agaagaaagacacaa 3106169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 576
Target Start/End: Complemental strand, 6008535 - 6008414
Alignment:
Q  455 gtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacat 554  Q
    ||||||| |||||||||||| ||||||  | ||| ||| |||||||||||||||||| ||||||||||  | |  |     |||||||||||||||| ||    
T  6008535 gtacgatacgatacagatatgcggatacgtgaatatttcaaaatttaggatacgatacggctaagatacttaaacaaaaaatttatattaaaacttatat 6008436  T
Q  555 gcatgtaaaatacttgaagaaa 576  Q
    | ||||||||||||||||||||    
T  6008435 gtatgtaaaatacttgaagaaa 6008414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 733
Target Start/End: Complemental strand, 8686267 - 8686177
Alignment:
Q  642 tgagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||| ||| ||| |||||||||||   |||||||||||||||||||||||| |||  |||||||||||||||| |||||||||| ||||    
T  8686267 tgagttctgcttttgaagtgatgttcagattctaaatgcagcggataaaacagagcgag--agaagaaagacacaaaacaattatacaagttc 8686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 17246895 - 17246952
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||    
T  17246895 gagttctacttctgaagtgatgttcagaactagatgcggcggataaaacagagagaga 17246952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 594
Target Start/End: Complemental strand, 40217998 - 40217889
Alignment:
Q  486 aattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcact 584  Q
    |||||||| ||||||||||||||||| |||||||||| ||||  |   | |||||| ||||||||| ||| || |||||||||||||| |||||| || |    
T  40217998 aattttttgaaatttaggatacgatacggctaagatacgttaacaaaatatttatactaaaacttatatgtatataaaatacttgaagaaaataaacatt 40217899  T
Q  585 gattactctt 594  Q
    ||||||||||    
T  40217898 gattactctt 40217889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 643 - 715
Target Start/End: Complemental strand, 3500477 - 3500402
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagag--agaaagaagaaagacaca 715  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||    
T  3500477 gagttctacttctgaagggatgttcagaactaaatgcagcggataagaacagagagaaagagagaagaaagacaca 3500402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 22190131 - 22190206
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac--agagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||  ||||| ||| |||||||||||||||    
T  22190131 gagttctacttctgaagagatgttcataactaaatgcagcggataaaacaaagagaaagagagaagaaagacacaa 22190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 723
Target Start/End: Original strand, 8103580 - 8103651
Alignment:
Q  649 tacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||| ||||||||||  ||||| ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  8103580 tacttctgaagtgatgttcataactaattgcagcggataaa-cagagagaga--gaagaaagacacaaagcaatt 8103651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 678 - 733
Target Start/End: Complemental strand, 29681305 - 29681250
Alignment:
Q  678 gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||    
T  29681305 gcagcggataaaacagagagagaaagaagaacaacacaaaacaattatacaggttc 29681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 678 - 733
Target Start/End: Complemental strand, 37986401 - 37986346
Alignment:
Q  678 gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  37986401 gcagtggataaaacagagagagaaataagaaagacacaaaacaattatacaggttc 37986346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 719
Target Start/End: Complemental strand, 19621813 - 19621730
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--------agagaaagaagaaagacacaaagc 719  Q
    |||||| ||||| | ||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  19621813 agttctgcttctaaagtgatgttcagaactaaatgcagcggataaaacagagaaagagacagagaaagaagaaagacacaaagc 19621730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 639 - 711
Target Start/End: Original strand, 16847668 - 16847741
Alignment:
Q  639 ttctgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa-cagagagagaaagaagaaaga 711  Q
    |||| |||| ||||||||| || |||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  16847668 ttctaagttgtacttctgaagtaatgttcagaactaaatgcagcggataaaagcagagagagagagaaggaaga 16847741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 16852758 - 16852815
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    |||||||||||||| || |||||||| |||||||||||||||| ||||||||||||||    
T  16852758 agttctacttctgaagtaatgttcagaactaaatgcagcggataaaaacagagagaga 16852815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 17399504 - 17399447
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| |||| ||||||||||||||||||| |||||    
T  17399504 gagttctacttctgaagagatgttcagaactagatgcagcggataaaacagatagaga 17399447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 54679146 - 54679203
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||  || | |||||||||||||||||||||||||    
T  54679146 gagttctacttctgaagtgatgttcaaaacaagatgcagcggataaaacagagagaga 54679203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 589
Target Start/End: Complemental strand, 4776184 - 4776084
Alignment:
Q  490 ttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttga-agaaataagcactgatt 588  Q
    ||||||||||||| |||||||   ||||| ||| |||| ||   |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||||    
T  4776184 ttttaaaatttagaatacgatgcagctaaaatacgttaataatatttttatattaaaacttatatgtatgtaaaatacttgataaaaataagcattgatt 4776085  T
Q  589 a 589  Q
    |    
T  4776084 a 4776084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 24628721 - 24628674
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  24628721 gagttctacttctgaagtgatgttcaggactaaatgcattggataaaa 24628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 523
Target Start/End: Complemental strand, 49196008 - 49195937
Alignment:
Q  452 cgagtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatggctaagatat 523  Q
    |||||||||| ||| ||| ||| | | |||||||| ||||| |||||||||||||||||| |||||||||||    
T  49196008 cgagtacgatacgaaacatatacatgaatatataagtttttaaaaatttaggatacgatacggctaagatat 49195937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 6640983 - 6641062
Alignment:
Q  651 cttctgaggtgatgttcagg-actaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    |||||||||||| |||||||||| ||||    
T  6640983 cttctgaagtgatgttcagatactaaatgcaatggataaaacagagagagaa----gaaagacacaaaacaattatacaagttc 6641062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 15135004 - 15135062
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||| | ||||||||||||| |||| ||||||||||||||||||||||||    
T  15135004 gagttccacttctaaagtgatgttcaggatctaattgcagcggataaaacagagagaga 15135062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 16631760 - 16631817
Alignment:
Q  678 gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||  ||||||| |||||||||| |||||||||||||| ||||    
T  16631760 gcagcggataaaacagagagagagaaataagaaagacagaaagcaattatacaggttc 16631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 704
Target Start/End: Complemental strand, 27189467 - 27189410
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaaga 704  Q
    |||||||||||| | ||||||||| |||||||||||||||||||| | |||||||||||    
T  27189467 ttctacttctgaagagatgttcagaactaaatgcagcggataaaa-atagagagaaaga 27189410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 723
Target Start/End: Complemental strand, 37436354 - 37436277
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||| ||| ||||||||||| |||| | |||||| ||||||   | ||||| ||||||||||||||||||||||    
T  37436354 gagttctacttatgaagtgatgttcagaactagaagcagcgaataaaa---acagagagagaagaaagacacaaagcaatt 37436277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 56033813 - 56033873
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat---aaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||   ||||||||||||||    
T  56033813 gagttctacttctgaagtgatgttcaggactagatgcagcgaatctaaaaacagagagaga 56033873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 10071789 - 10071846
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||||| ||||||||||| |||| ||||||  |||||||||||||||||    
T  10071789 gagttccacttctgaagtgatgttcagaactagatgcagtagataaaacagagagaga 10071846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 661 - 727
Target Start/End: Complemental strand, 15475955 - 15475887
Alignment:
Q  661 gatgttcaggactaaatgcagcggataaaacagagaga--gaaagaagaaagacacaaagcaattatac 727  Q
    ||||| ||| |||| ||||||| |||||||||||||||  || |||||| |||||||||||||||||||    
T  15475955 gatgtccagaactagatgcagcagataaaacagagagaaagagagaagagagacacaaagcaattatac 15475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 19884069 - 19884110
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  19884069 agagagagagagaagaaagacacaaagcaattatacaggttc 19884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 651 - 726
Target Start/End: Original strand, 15560563 - 15560644
Alignment:
Q  651 cttctgaggtgatgttcagga-ctaaatgcagcggataaaa-cagaga----gagaaagaagaaagacacaaagcaattata 726  Q
    ||||||| ||||||||||| | ||||||||||||||||||| ||||||    |||| |||||||||||||||| ||||||||    
T  15560563 cttctgaagtgatgttcagaatctaaatgcagcggataaaaacagagaaagcgagagagaagaaagacacaaaacaattata 15560644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 594
Target Start/End: Original strand, 28101750 - 28101802
Alignment:
Q  543 taaaacttacatgcatgtaaaatacttgaag-aaataagcactgattactctt 594  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  28101750 taaaacttatatgcatgcaaaatacttgaagaaaataagcattgattactctt 28101802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 22089575 - 22089663
Alignment:
Q  651 cttctgaggtgatgttcagga-ctaaatgcagcggataaaa-cagagagagaaaga----agaaagacacaaagcaattatacatgttc 733  Q
    ||||||| |||||||||||   ||||||||||||||||||| ||||| |||| |||    |||||||||||||||||||||||| ||||    
T  22089575 cttctgaagtgatgttcagatgctaaatgcagcggataaaaacagagggagatagatagaagaaagacacaaagcaattatacaggttc 22089663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 44397494 - 44397541
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  44397494 gagttctgcttctgaagtgatgttcaggactagatgtagcggataaaa 44397541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 45832677 - 45832764
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaac-----agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||  |||||||||||| |  |||||||||||||||      ||||||| | ||||||||||||||||||||||||||| ||||    
T  45832677 cttctgaactgatgttcaggattcgatgcagcggataaaaacagatagagagacagagaagaaagacacaaagcaattatacaggttc 45832764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 576
Target Start/End: Original strand, 4110102 - 4110144
Alignment:
Q  534 tttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||| ||||||||| || |||||||||||||||||||||    
T  4110102 tttttatactaaaacttatatacatgtaaaatacttgaagaaa 4110144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 692
Target Start/End: Original strand, 10072182 - 10072224
Alignment:
Q  650 acttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    |||||||| ||||||||||| |||| |||||||||||||||||    
T  10072182 acttctgaagtgatgttcagaactagatgcagcggataaaaca 10072224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 534 - 576
Target Start/End: Complemental strand, 45662054 - 45662012
Alignment:
Q  534 tttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||| ||||||||| |||||||||||||| |||||||||    
T  45662054 tttttatactaaaacttatatgcatgtaaaatatttgaagaaa 45662012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 55731118 - 55731172
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||  ||||  ||||| ||||||||||||||||||    
T  55731118 ttctacttctgaagtgatgttcaaaactagttgcagtggataaaacagagagaga 55731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 3394986 - 3395027
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||| ||||||||||||||| |||||||||| ||||    
T  3394986 agagagagaaggaagaaagacacaaaacaattatacaggttc 3395027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 11900527 - 11900568
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||    
T  11900527 agagagagagagaagaaagacacaaagtaattatacaggttc 11900568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 12600041 - 12600098
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    |||||||||||||| ||||| |  || ||||||| |||||||||||||||||||||||    
T  12600041 agttctacttctgaagtgatttctagaactaaatagcagcggataaaacagagagaga 12600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 14357695 - 14357736
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  14357695 agagagagagagaagaaagacacaaaacaattatacaggttc 14357736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 14905149 - 14905092
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaa-atgcagcggat-aaaacagagaga 698  Q
    ||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||    
T  14905149 gagttctacttctgaagtgatgttcatgactaatttgcagcggataaaaacagagaga 14905092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 16939263 - 16939319
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||| |||| |||| | ||||||||| ||||| ||||||||||||||||||||||||    
T  16939263 gagttatactcctgaagagatgttcag-actaattgcagcggataaaacagagagaga 16939319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 17246966 - 17247007
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||    
T  17246966 agagagagagagaggaaagacacaaagcaattatacaagttc 17247007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 22676297 - 22676256
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  22676297 agagagagagaaaagaaagacacaaagcaattatacaggttc 22676256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 44987656 - 44987599
Alignment:
Q  538 tatattaaaacttacatgcatgtaaaatacttgaag-aaataagcactgattactctt 594  Q
    |||| ||||||||| || |||||||||||||||||| |||||||||  ||||||||||    
T  44987656 tatactaaaacttatattcatgtaaaatacttgaagaaaataagcaacgattactctt 44987599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 488 - 569
Target Start/End: Original strand, 47724570 - 47724650
Alignment:
Q  488 ttttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatactt 569  Q
    |||||||||||| ||||||||||| |||||| ||| ||||  |  || |||||| ||||| ||| |||||||||||||||||    
T  47724570 ttttttaaaatt-aggatacgatacggctaatatacgttaacaaattatttatactaaaatttatatgcatgtaaaatactt 47724650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 6498601 - 6498692
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6498601 gagttctacttctgaagtgatgttcaggactaagttgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacaggttc 6498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 642 - 728
Target Start/End: Complemental strand, 21076034 - 21075946
Alignment:
Q  642 tgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga--gagaaagaagaaagacacaaagcaattataca 728  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||    
T  21076034 tgagttctacttctgaagtgatgttcagaactaaatgcagcggataaaacagagagagagagagaagaaagacacaaaacaattataca 21075946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 23880299 - 23880356
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23880299 gagttctacttctgaagtgatgttcaggactaaatgcagcggataaaacagagagaga 23880356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 7746546 - 7746452
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||||| | | |||||||||||    ||||||||||||||||||||||||||||||||||||| ||||    
T  7746546 gagttctacttctgaagtgatgttcaggactaacttgtagcggataaaaacagagagagagaaagaagaaagacacaaagcaattatacaggttc 7746452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 6513280 - 6513189
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  6513280 gagttctgcttctgaagtgatttccagaactaagtagcagcggataaaacagagagagaaagaagaaagacacaaaacaattatacaggttc 6513189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 646 - 733
Target Start/End: Complemental strand, 9399460 - 9399374
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||    
T  9399460 ttctatttctgaagtgatgt-caggactaattgcagcggataaaacaaagagagaaagaagagagacacaaaacaattatacaagttc 9399374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 651 - 728
Target Start/End: Complemental strand, 22000869 - 22000790
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaaca--gagagagaaagaagaaagacacaaagcaattataca 728  Q
    |||||||  |||||||||||||||| |||||| |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  22000869 cttctgaaatgatgttcaggactaattgcagcagataaaacaaagagagagaaggaagaaagacacaaagcaattataca 22000790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 35932856 - 35932781
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  35932856 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 35932781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 651 - 700
Target Start/End: Complemental strand, 19546372 - 19546323
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19546372 cttctgaagtgatgttcaggactaaatgcagcggataaaacagagagaga 19546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 576
Target Start/End: Complemental strand, 8229588 - 8229500
Alignment:
Q  488 ttttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||||||||||||||||||| | |||||||| |||| ||     |||||||||||||||| ||| ||||||||||||||||||||    
T  8229588 ttttttaaaatttaggatacgatacgactaagatacgttaataaaaaatttatattaaaacttatatgtatgtaaaatacttgaagaaa 8229500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 733
Target Start/End: Complemental strand, 643546 - 643458
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaa-tgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||| ||| |||||||| ||||||||| |||| |||||||||| ||||||||  ||||||||||||||| |||||||||| ||||    
T  643546 agttctacttttgaagtgatgtttaggactaaaatgcaacggataaaacggagagaga--gaagaaagacacaaaacaattatacaagttc 643458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 17814253 - 17814343
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| ||||||| ||||| | ||  ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  17814253 ttctgcttctgaagtgatttccataactaaatagcagcggataaaacagagagagagaaagaagaaagacacaaagcaattatacaggttc 17814343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 23413826 - 23413732
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cag--agagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||| ||| |||||||||| ||||| || ||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||    
T  23413826 gagttctgcttttgaagtgatgttcatgactagattgcagcggataaaaacagggagagagaaagaagaaagacacaaagcaattatacaggttc 23413732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 10848058 - 10848119
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaaga 704  Q
    |||||||||||||||   ||||||||  ||||||||||||||||||||||||||||||||||    
T  10848058 gagttctacttctgaaaagatgttcataactaaatgcagcggataaaacagagagagaaaga 10848119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 31487495 - 31487552
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||    
T  31487495 gagttctaattttgaagtgatgttcaggactagatgcagcggataaaacagagagaga 31487552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 485 - 576
Target Start/End: Original strand, 2627779 - 2627870
Alignment:
Q  485 aaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    ||||||||||||||||||||||||||| || ||||||| ||||  |    ||||||| ||||||||| ||| ||||||||||||| ||||||    
T  2627779 aaattttttaaaatttaggatacgatacggttaagatacgttaacaaaaattttatactaaaacttatatgtatgtaaaatacttcaagaaa 2627870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 31146453 - 31146398
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    ||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||    
T  31146453 gagttctacttctaaagagatgttcagaactaaatgcagcggataaaacagagaga 31146398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 646 - 723
Target Start/End: Original strand, 37395457 - 37395534
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||| |||||| ||||||||||| ||||  |||||||||||||||||| ||| | |||||||| ||||| |||||||    
T  37395457 ttctatttctgaagtgatgttcagaactagttgcagcggataaaacagaaagaaagagaagaaaaacacatagcaatt 37395534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 733
Target Start/End: Complemental strand, 26766637 - 26766593
Alignment:
Q  689 aacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  26766637 aacaaagagagaaagaagaaagacacaaagcaattatacaggttc 26766593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 30742227 - 30742283
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||||| ||||||||||| ||||  |||||| |||||||||||||||||    
T  30742227 agttctacttctgaagtgatgttcagaactagttgcagcagataaaacagagagaga 30742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 695
Target Start/End: Complemental strand, 12353712 - 12353661
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag 695  Q
    |||||||||| ||| |||||||||| |||||| |||||||||||||||||||    
T  12353712 agttctacttatgaagtgatgttcatgactaattgcagcggataaaacagag 12353661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 35987074 - 35987019
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    |||||||||||||||   ||||||||| |||| |||||||||||||||||||||||    
T  35987074 gagttctacttctgaatagatgttcagaactagatgcagcggataaaacagagaga 35987019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 694 - 733
Target Start/End: Complemental strand, 39799637 - 39799598
Alignment:
Q  694 agagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  39799637 agagagagagaagaaagacacaaagcaattatacatgttc 39799598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 33932557 - 33932611
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||  |||||||||| ||||  ||||||||||||||||||||||||    
T  33932557 ttctacttctgaaatgatgttcagaactagttgcagcggataaaacagagagaga 33932611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 90283 - 90234
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||| |||| || |||||||||| |||||||||||||||||||||||    
T  90283 gagttctgcttccgaagtgatgttcatgactaaatgcagcggataaaaca 90234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 594
Target Start/End: Complemental strand, 7057435 - 7057334
Alignment:
Q  495 aaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatac-ttgaag-aaataagcactgattactc 592  Q
    ||||||||||||||||| || ||||||| ||||| |    ||||||| ||||| ||| ||| ||||||||||| |||||| ||||||||| |||||||||    
T  7057435 aaatttaggatacgatacggttaagatacgttagcaaaaattttatactaaaatttatatgtatgtaaaatactttgaagaaaataagcattgattactc 7057336  T
Q  593 tt 594  Q
    ||    
T  7057335 tt 7057334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 11993175 - 11993258
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa---acagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||| ||||||| ||||||||||| ||||| | || ||||||||   | |||||| ||| |||||||||||||||||||||    
T  11993175 gagttctgcttctgaagtgatgttcagaactaatttcaacggataaaaacaaagagagggaaggaagaaagacacaaagcaatt 11993258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 696
Target Start/End: Original strand, 28138885 - 28138937
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga 696  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||    
T  28138885 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagaga 28138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 29139272 - 29139216
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| | | ||||||||| ||||| ||||||||||||||||||||||||    
T  29139272 gagttctacttctaaagagatgttcag-actaattgcagcggataaaacagagagaga 29139216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 732
Target Start/End: Original strand, 16606854 - 16606894
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgtt 732  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  16606854 agagagagagaaaagaaagacacaaagcaattatacatgtt 16606894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 31117162 - 31117258
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaa-atgcagcggataaa-----acagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||| || |||||  ||||| |||||||     | ||||||||||||||||||||||||||| | ||||||| ||||    
T  31117162 gagttctacttctgaagtgatgtttagaactaacttgcagtggataaaaacagagagagagagaaagaagaaagacacaaagtagttatacaggttc 31117258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 3246313 - 3246266
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||    
T  3246313 gagttctacttctgaagagatgttcagaactaattgcagcggataaaa 3246266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 13546377 - 13546279
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatg-cagcggataaaa-cagagagag------aaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||  ||||| |  |||||||||||| |||||||||      |||||||||||||||||| |||||||||| ||||    
T  13546377 gagttctacttctgaagtgatgttcataactaacttacagcggataaaaacagagagagggagagaaagaagaaagacacaaaacaattatacaggttc 13546279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 26783627 - 26783682
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    |||||||||||| |||||||| || ||||||| ||||||||||||| |||||||||    
T  26783627 ttctacttctgaagtgatgtttagaactaaatagcagcggataaaatagagagaga 26783682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 33021946 - 33022032
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa------acagagagagaaagaagaaagacacaaagcaatt 723  Q
    |||||||||||| || ||||||||||| |||| |||||  |||||||      | ||||||||| ||||||||||||||||||||||    
T  33021946 gagttctacttccgaagtgatgttcagaactagatgcaatggataaaatagagagagagagagagagaagaaagacacaaagcaatt 33022032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 13736956 - 13736907
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    |||||| |||||||| ||||||||||  |||| |||||||||||||||||    
T  13736956 gagttccacttctgaagtgatgttcataactagatgcagcggataaaaca 13736907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 21100502 - 21100461
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  21100502 agagagagagagaagaaagacacaaaacaattatacaggttc 21100461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 21207575 - 21207534
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||    
T  21207575 agagagagagagaagaaagacacaaagcaatcatacaggttc 21207534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 727
Target Start/End: Original strand, 21659518 - 21659586
Alignment:
Q  661 gatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaagcaattatac 727  Q
    ||||| ||| |||| ||||||||||||||| ||||||  ||| |||||| ||||||||| |||||||||    
T  21659518 gatgtccagaactagatgcagcggataaaatagagagaaagagagaagagagacacaaatcaattatac 21659586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 715
Target Start/End: Complemental strand, 23407477 - 23407421
Alignment:
Q  661 gatgttcaggactaaatgcagcggataaaacagagaga--gaaagaagaaagacaca 715  Q
    ||||||||| |||| |||||| ||||||||||||||||  || ||||||||||||||    
T  23407477 gatgttcagaactagatgcagtggataaaacagagagaaggagagaagaaagacaca 23407421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 25097625 - 25097584
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||    
T  25097625 agagagagagagaggaaagacacaaagcaattatacaggttc 25097584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 28465197 - 28465141
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||| | |||||||||    
T  28465197 gagttctacttctgaagtgatattcag-actaattgcagcggataagagagagagaga 28465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 31487576 - 31487617
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| |||||||||||||| |||||||||| ||||    
T  31487576 agagagagaaaaaagaaagacacaaaacaattatacaggttc 31487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 19328881 - 19328795
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  19328881 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaaagagagagagaaagaagaaagacacaaagcaattataca 19328795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 21284245 - 21284153
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||| |||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21284245 gagttctatttctgaagtgatgttcaggattaaattgcagcggataaaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 21284153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 4832195 - 4832104
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  4832195 gagttctacttctgaagtgatgttcagaactaattgcagcggataaaaacagagagagaaggaagaaagacacaaagcaattatacaggttc 4832104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 41843293 - 41843203
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||| ||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41843293 gagttctacttctgaagtgatgttcagaactaattgcagcaaataaaacagagagagaaagaagaaaaacacaaagcaattatacaagttc 41843203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 644 - 735
Target Start/End: Complemental strand, 13473357 - 13473258
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaa--------agaagaaagacacaaagcaattatacatgttcat 735  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||    
T  13473357 agttctacttctgaagtgatgttcaagactaaatgcagcggataaaacagagagagaaagagagagagaagaaagacacaaatcaattatacatgttcat 13473258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 13681582 - 13681673
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13681582 gagttctgcttctgaagtgatttccagaactaaatagcagcggataaaacaaagagagaaagaagaaagacacaaagcaattatacaggttc 13681673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 30025222 - 30025313
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  30025222 agttctacttatgatgtgatgttcaggactaacttgcagcggataaaaacatagagagaaagaagaaagacacaaaacaattatacatgttc 30025313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 15087840 - 15087929
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||||| ||||||||| ||||||||| ||||    
T  15087840 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaa-acagagagagagaagaaggacacaaagaaattatacaggttc 15087929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 29936216 - 29936124
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaa--agaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| |||||||||| |||| |||||||||||| ||||||||||||||  |||||||||||||||| |||||||||| ||||    
T  29936216 gagttctgcttctgaagtgatgttcatgactgaatgcagcggatgaaacagagagagaaagagaagaaagacacaaaacaattatacaggttc 29936124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 4820772 - 4820865
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||| ||||||||||| ||||| ||||||||||||||    |||||||||| |||||||||||||||||||||||||| ||||    
T  4820772 gagttctacttttgaagtgatgttcagaactaattgcagcggataaaattagagagagagaaggaagaaagacacaaagcaattatacaggttc 4820865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 651 - 733
Target Start/End: Complemental strand, 10884033 - 10883950
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||| || || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  10884033 cttctgaagtgattttgagaactaaatagcagcggataaaatagagagagaaagaagaaagacacaaagcaattatacaggttc 10883950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 13645738 - 13645829
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| |||||||  |||| | ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13645738 gagttctgcttctgaactgatttccagaactaaatagcagcggataaaacagagagagaaagaggaaagacacaaagcaattatacaggttc 13645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 12367628 - 12367571
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12367628 gagttcttcttctgaagtgatgttcaggactaaatgcagcggataaaacagagagaga 12367571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 16315408 - 16315317
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| || |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  16315408 gagttctgcttctgaagtgatttccagaacaaaatagcagcggataaaacaaagagagaatgaagaaagacacaaagcaattatacaggttc 16315317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 9710705 - 9710648
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  9710705 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 9710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 14186976 - 14187067
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||| ||||||||||||| ||| | |||||||||||||    ||||||||||||||||||||||||||| ||||||||| ||||    
T  14186976 ttctacttctgaagtgatgttcaggagtaacttgcagcggataaaaacaaagagagagaaagaagaaagacacaaagaaattatacaggttc 14187067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 33604194 - 33604285
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| ||||||| ||||||||||| ||||| | |||||||||||||    ||||||||||||||||||||||||||||||||||||| ||||    
T  33604194 ttctgcttctgacgtgatgttcagaactaacttgcagcggataaaaacggagagagagaaagaagaaagacacaaagcaattatacaggttc 33604285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 700
Target Start/End: Complemental strand, 5001732 - 5001676
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  5001732 agttctgcttctgaagtgatgttcaagactaaatgcagcggataaaacagagagaga 5001676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 700
Target Start/End: Original strand, 11792159 - 11792215
Alignment:
Q  645 gttctacttctgaggtgatgttcaggact-aaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  11792159 gttctacttctgaagtgatgttcaggactaaaatgcagcggataaaacagagagaga 11792215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 700
Target Start/End: Complemental strand, 16317466 - 16317410
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  16317466 agttctgcttctgaagtgatgttcaggactaaatgcagcggataaaatagagagaga 16317410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 9069083 - 9069138
Alignment:
Q  678 gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  9069083 gcagcggataaaacagagagagaaagaagaaagacacaaatcgattatacaggttc 9069138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 13302184 - 13302239
Alignment:
Q  678 gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  13302184 gcagcggataaaataaagagagaaagaagaaagacacaaagcaattatacaggttc 13302239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 14424594 - 14424678
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||||||||    |||||||||||||| |||||||||||||||||    
T  14424594 gagttctacttctgaagtgatgttcggaactaaattgcagcggataaaaacagagagagagaaagaaaaaagacacaaagcaatt 14424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 13259314 - 13259257
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  13259314 gagttctgcttctaaagtgatgttccggactaaatgcagcggataaaacagagagaga 13259257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 13731547 - 13731459
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga--aagaagaaagacacaaagcaattataca 728  Q
    ||||||| ||||||| ||||| | ||| ||||| | |||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13731547 gagttctgcttctgaagtgatttccagaactaagtagcagtggataaaacagagagagagaaagaagaaagacacaaagcaattataca 13731459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 717
Target Start/End: Complemental strand, 12175202 - 12175133
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    |||||||| ||| ||||||||||| ||||  |||||||||||||||||||||||  ||||||||||||||||    
T  12175202 ttctacttttgaagtgatgttcagaactagttgcagcggataaaacagagagag--agaagaaagacacaaa 12175133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 13138796 - 13138749
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  13138796 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaa 13138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 723
Target Start/End: Complemental strand, 28623224 - 28623149
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||    ||||||||||||||||||||||    
T  28623224 gagttctacttctgaagtgatgttcagaactagatgtagcggat-aaacagagag----agaagaaagacacaaagcaatt 28623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 674 - 716
Target Start/End: Original strand, 330970 - 331012
Alignment:
Q  674 aaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  330970 aaatgcagcggataaaacagagagaaaaagaagaaagacacaa 331012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 576
Target Start/End: Complemental strand, 7858257 - 7858216
Alignment:
Q  535 ttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  7858257 ttttatattaaaacttatatgcatgtaaaatacttgaagaaa 7858216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 11318742 - 11318783
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11318742 agagagagaaagaagaaagacacaaagcaattatacaggttc 11318783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 644 - 700
Target Start/End: Complemental strand, 13034723 - 13034666
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    |||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||    
T  13034723 agttctacttctgaagtgatgttcatgactaagttgcagcggataaaacagagagaga 13034666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 13261546 - 13261497
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  13261546 gagttctgcttctgaagtgatgttccggactaaatgcagcggataaaaca 13261497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 661 - 727
Target Start/End: Complemental strand, 19711864 - 19711796
Alignment:
Q  661 gatgttcaggactaaatgcagcggataaaacagagaga--gaaagaagaaagacacaaagcaattatac 727  Q
    ||||| ||| |||| |||||||||||||||||||||||  || |||||| |||||||||||||||||||    
T  19711864 gatgtccagaactagatgcagcggataaaacagagagaaggagagaagagagacacaaagcaattatac 19711796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 646 - 716
Target Start/End: Original strand, 27871007 - 27871079
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    |||||||||||| | ||||||||   ||||||||||||||||||||||||||  ||| |||||||||||||||    
T  27871007 ttctacttctgaagagatgttcatacctaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 27871079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 33692593 - 33692536
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||||| ||||||||||| |||| |||||||| ||||||||||||||||    
T  33692593 gagttccacttctgaagtgatgttcagaactagatgcagcgaataaaacagagagaga 33692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 48237706 - 48237649
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| |||| |||||| |||| ||||| |||||||||||||||||||    
T  48237706 gagttctacttctgaagtgaagttcagaactagatgcatcggataaaacagagagaga 48237649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 723
Target Start/End: Complemental strand, 16155608 - 16155529
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaaga--agaaagacacaaagcaatt 723  Q
    |||||||||||| ||||| || || ||||  |||||| |||||| ||||||||||||||  |||||||||||||||||||    
T  16155608 ttctacttctgaagtgatatttagaactagttgcagcagataaatcagagagagaaagaagagaaagacacaaagcaatt 16155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 723
Target Start/End: Complemental strand, 16546207 - 16546125
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaa---acagagagagaaagaagaaagacacaaagcaatt 723  Q
    |||||||||||||| |||||||| || ||||  |||||||||||||   | ||||||||| |||||||||||||||| |||||    
T  16546207 agttctacttctgaagtgatgtttagaactagttgcagcggataaacagagagagagagagagaagaaagacacaaaacaatt 16546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 723
Target Start/End: Original strand, 16619455 - 16619537
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaa---acagagagagaaagaagaaagacacaaagcaatt 723  Q
    |||||||||||||| |||||||| || ||||  |||||||||||||   | ||||||||| |||||||||||||||| |||||    
T  16619455 agttctacttctgaagtgatgtttagaactagttgcagcggataaacagagagagagagagagaagaaagacacaaaacaatt 16619537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 48063682 - 48063627
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    ||||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||    
T  48063682 gagttctacttctgaagagatattcataactaaatgcagcggataaaacagagaga 48063627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 726
Target Start/End: Complemental strand, 2914431 - 2914397
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||||||||||||||||||||||||||||||||    
T  2914431 agagagagaaagaagaaagacacaaagcaattata 2914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 692
Target Start/End: Complemental strand, 16310823 - 16310777
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  16310823 ttctgcttctgaagtgatgttcaggactgaatgcagcggataaaaca 16310777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 700
Target Start/End: Complemental strand, 16911750 - 16911696
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| ||||  |||||||||| |||||||||||||    
T  16911750 ttctacttctgaagtgatgttcagaactagttgcagcggatgaaacagagagaga 16911696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 24787682 - 24787739
Alignment:
Q  678 gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||  |||||||||||||||||||| | |||||||||| ||||    
T  24787682 gcagcggataaaacagagagagagaaagaagaaagacacacaacaattatacaggttc 24787739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 4493912 - 4493953
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  4493912 agagagagagagaagaaagacacaaagcaattatacaggttc 4493953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 5001646 - 5001605
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  5001646 agagagagagagaagaaagacacaaagcaattatacaggttc 5001605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 13027719 - 13027678
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  13027719 agagagagaaagaagaaagacacaaagcaagtatacaggttc 13027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 13034658 - 13034617
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  13034658 agagagagaaagaagaaagacacaaagaaattatacaggttc 13034617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 13879507 - 13879548
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  13879507 agagagagatagaagaaagacacaaagcaattatacaggttc 13879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 14424801 - 14424858
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||||||   | ||||||| |||||||| |||||||||||||||||||||    
T  14424801 gagttctacttctgaaaagttgttcagaactaaatgtagcggataaaacagagagaga 14424858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 15467202 - 15467296
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca----gagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| |||||| | ||||||||||  |||| |||||| ||||||||||    |||||||| |||||||||||||| | |||||||||| ||||    
T  15467202 gagttccacttcttaagtgatgttcataactagatgcagtggataaaacatagagagagagagagaagaaagacacatatcaattatacaagttc 15467296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 15705365 - 15705308
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| | ||| |||||||||||||||| |||||||    
T  15705365 gagttctacttctgaagagatgttcagtattaattgcagcggataaaacatagagaga 15705308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 715
Target Start/End: Complemental strand, 19340117 - 19340045
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggata-aaacagagag--agaaagaagaaagacaca 715  Q
    |||||||||||| | ||||||||| |||||||||||||||||  |||||||||  ||| ||||||||||||||    
T  19340117 ttctacttctgaagagatgttcagaactaaatgcagcggatacgaacagagagaaagagagaagaaagacaca 19340045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 21211364 - 21211323
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  21211364 agagagagagagaagaaagacacaaagcaattatacaagttc 21211323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 594
Target Start/End: Complemental strand, 43728361 - 43728252
Alignment:
Q  486 aattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa-taagcact 584  Q
    |||||||| |||||||| |||||||| ||||| |||| |||   |  ||||||||| |||| |||| ||| |||| |||||||| |||||| ||| ||||    
T  43728361 aatttttttaaatttagaatacgatacggctaggatacgttgacaaattttttatactaaatcttatatgtatgtgaaatacttaaagaaaataaacact 43728262  T
Q  585 gattactctt 594  Q
    ||||||||||    
T  43728261 gattactctt 43728252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 44466368 - 44466425
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    |||||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||||    
T  44466368 agttctacctctgaagtgatgttcatgactagatgcagcggataaaaacagagagaga 44466425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 44466431 - 44466472
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  44466431 agagagagagagaagaaagacacaaagcaattatacaggttc 44466472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 672 - 735
Target Start/End: Original strand, 26042727 - 26042787
Alignment:
Q  672 ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttcat 735  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||  |||||||||| ||||||    
T  26042727 ctaaatgcagcagataaaa-acagagagaaagaagaaagacacaa--caattatacaggttcat 26042787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 700
Target Start/End: Complemental strand, 2266435 - 2266376
Alignment:
Q  642 tgagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    |||||||||||||||| |  |||||||  |||||||||||||||| ||||||||||||||    
T  2266435 tgagttctacttctgaagaaatgttcataactaaatgcagcggataaaaacagagagaga 2266376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 690 - 733
Target Start/End: Complemental strand, 13138718 - 13138675
Alignment:
Q  690 acagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||||    
T  13138718 acagagagagagagaggaaagacacaaagcaattatacaggttc 13138675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 576
Target Start/End: Original strand, 47843501 - 47843544
Alignment:
Q  533 ttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  47843501 ttttttataataaaacttatatgtatgtaaaatacttgaagaaa 47843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Complemental strand, 9099050 - 9099016
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  9099050 agagagagagagaagaaagacacaaagcaattata 9099016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Complemental strand, 9099856 - 9099822
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  9099856 agagagagagagaagaaagacacaaagcaattata 9099822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 13879430 - 13879487
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||||||    
T  13879430 gagttctacttctgaagtgatgttca-gactagatgcagcagataaaaacagagagaga 13879487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 717
Target Start/End: Complemental strand, 14304661 - 14304613
Alignment:
Q  672 ctaaatgcagcggataa---aacagagagagaaagaagaaagacacaaa 717  Q
    |||||||||||||||||   || ||||||||||||||||||||||||||    
T  14304661 ctaaatgcagcggataagtaaaaagagagagaaagaagaaagacacaaa 14304613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 21382297 - 21382224
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagag--agaaagaagaaagacacaa 716  Q
    |||||||||||| | ||||||||| ||||||||||||| |||| |||||||||  ||| |||||| ||||||||    
T  21382297 ttctacttctgaagagatgttcagaactaaatgcagcgaataagaacagagagaaagagagaagagagacacaa 21382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 2499400 - 2499441
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||| |||||||| ||||||| ||||    
T  2499400 agagagagaaagaagaaagatacaaagcatttatacaggttc 2499441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 11792247 - 11792288
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  11792247 agagagagagagaagaaagacacaaaacaattatacaggttc 11792288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 12367557 - 12367516
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||| |||||||||||||||| ||||    
T  12367557 agagagagagagaagaaagatacaaagcaattatacaggttc 12367516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 729
Target Start/End: Complemental strand, 13902432 - 13902395
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacat 729  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  13902432 agagagagagagaagaaagaaacaaagcaattatacat 13902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 16317374 - 16317333
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||    
T  16317374 agagagagagagaagaaagacacaaagcaatcatacaggttc 16317333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 700
Target Start/End: Complemental strand, 22580124 - 22580067
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||  |||||||||| |||| ||||||| ||| ||||||||||||||    
T  22580124 agttctacttctgaactgatgttcagaactagatgcagctgataaaaacagagagaga 22580067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 30946277 - 30946228
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||||| ||||| ||||||||||| |||| ||||| |||||||||||    
T  30946277 gagttctacgtctgaagtgatgttcagaactagatgcaacggataaaaca 30946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 35954782 - 35954725
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||| ||||||||| ||||| ||||| ||||  ||||||||||||| ||||||||||    
T  35954782 gagttttacttctgaagtgatattcagaactagttgcagcggataaatcagagagaga 35954725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 39285323 - 39285282
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  39285323 agagagagagagaagaaagacacaaaacaattatacaggttc 39285282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 543 - 572
Target Start/End: Complemental strand, 47278301 - 47278272
Alignment:
Q  543 taaaacttacatgcatgtaaaatacttgaa 572  Q
    ||||||||||||||||||||||||||||||    
T  47278301 taaaacttacatgcatgtaaaatacttgaa 47278272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 26367220 - 26367130
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  26367220 gagttttacttctgaagtgatattcaggactaattgcagcggataaaacagagagagaaagaagaaagatacaaagcaattatacaagttc 26367130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 21538000 - 21537908
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga--gagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  21538000 gagttctacttctgaagtgatgttcatgactaaatgcagcagataaaacagagagagagaaagaagaaagacacaaagcaattatacaggttc 21537908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 22316881 - 22316970
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| |||||||| ||| ||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22316881 agttccacttctgaagtggtgttcataactatatgcagcggataaaatagagagagaaagaagaaagacacaaagcaattatacaagttc 22316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 7018291 - 7018151
Alignment:
Q  455 gtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacat 554  Q
    |||||||  ||||||| |||||| ||| || | |||||| ||||||||||||||||| |||||||||| ||||  |   |||||||| ||||||||||||    
T  7018291 gtacgatatgatacaggtatacgaatacatgattttttttaaatttaggatacgatacggctaagatacgttaacaaaatttttatactaaaacttacat 7018192  T
Q  555 gcatgtaaaatacttgaag-aaataagcactgattactctt 594  Q
    | ||||||||||||||||| |||||| || |||||||||||    
T  7018191 gtatgtaaaatacttgaagaaaataaacattgattactctt 7018151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 10010563 - 10010474
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||| | ||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  10010563 gagttctgcttctaaagtgatgttcagaactaaatagcagcggataaaacagagagaga--gaagaaagacacaaagcaattatacaggttc 10010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 19539703 - 19539794
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cagagagaga--aagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||| |||||||||||||||| || ||||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||    
T  19539703 ttctacttctgaagtgatgttcaggactagattgcagcggataaaaacagagagagaggaagaagaaagacacaaagcaattatacaggttc 19539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 39038453 - 39038364
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||    
T  39038453 gagttatacttctgaagtgatgttcaagactaaattgcagcggataaaacagagagaga--gaagaaagatacaaatcaattatacatgttc 39038364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 22455772 - 22455682
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||| |||||||| ||||| ||||||| ||||||| | || |||||||||||||||||||||||||||||    
T  22455772 gagttctacttctgaagtgatgttcatgactaaattgcagcagataaaa-agagagaaagaggagaaagacacaaagcaattatacatgttc 22455682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 16494633 - 16494708
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  16494633 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 16494708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 644 - 728
Target Start/End: Complemental strand, 22188919 - 22188830
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagag----agagaaagaagaaagacacaaagcaattataca 728  Q
    |||||||||||||| ||||||||||| |||| ||||||||||| |||||||||    ||||| |||||||||||||||||||||||||||    
T  22188919 agttctacttctgaagtgatgttcagaactagatgcagcggataaaaacagagagaaagagagagaagaaagacacaaagcaattataca 22188830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 28141415 - 28141324
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||| |||  ||||||| || ||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  28141415 gagttctgcttgtgaattgatgtttagaactaaatagcaacggataaaacagagagagaaagaagaaatacacaaagtaattatacatgttc 28141324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 651 - 700
Target Start/End: Original strand, 24778626 - 24778675
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24778626 cttctgaagtgatgttcaggactaaatgcagcggataaaacagagagaga 24778675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 44839719 - 44839794
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  44839719 gagttctacttctgaaaagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 44839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 22801761 - 22801832
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||| | ||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||    
T  22801761 gagttctacttctaaagtgatgttcagaactagttgcagcggataaaacagagagag--agaagaaagacacaa 22801832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 38780686 - 38780775
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggat--aaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||| |||||||||||||| | |||||||||||   | | ||||||||| |||||||||||||||| |||||||||||||||    
T  38780686 ttctacatctgaagtgatgttcaggacgagatgcagcggatgagagagagagagagagagaagaaagacacaaaacaattatacatgttc 38780775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 40331400 - 40331471
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | |||| |||| ||||| |||||||||||||||||||||||  |||||||||||||||    
T  40331400 gagttctacttctgaagagatgatcagaactaactgcagcggataaaacagagagag--agaagaaagacacaa 40331471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 24851485 - 24851436
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  24851485 gagttctacttctgaagtgatgttcagaactaaatgcagcggataaaaca 24851436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 651 - 733
Target Start/End: Complemental strand, 20569554 - 20569473
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||| | ||| ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  20569554 cttctgaagtgatttccagaactaaatagcaacggataaaa--gagagagaaagaagaaagacacaaagcaattatacaggttc 20569473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 651 - 727
Target Start/End: Original strand, 24575327 - 24575406
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagaga--gagaaagaagaaagacacaaagcaattatac 727  Q
    ||||||| ||||| | ||| ||||||| |||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  24575327 cttctgaagtgatttccagaactaaatagcagcggataaaacagagatagagaaagaagaaagatacaaagcaattatac 24575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 25188689 - 25188776
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| |||||||| |||||||| |||| |||| |||||||||||||||||||||    |||||||||||||||| ||| |||||| ||||    
T  25188689 gagttccacttctgaagtgatgtttaggatctaattgcagcggataaaacagagag----agaagaaagacacaaaacaagtatacaggttc 25188776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 1587847 - 1587787
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaaga 704  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  1587847 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagaggaaga 1587787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 28551734 - 28551658
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagag--aaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||| |||||||||||||  | |||||||||||||||    
T  28551734 gagttctacttctgaagagatgttcagaactaattgcagcggataaaaacagagagagatagagaagaaagacacaa 28551658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 644 - 716
Target Start/End: Complemental strand, 34322741 - 34322671
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    |||||||||||||| | ||||||||| ||||| || ||||||||||||||||||||  |||||||| ||||||    
T  34322741 agttctacttctgaagagatgttcagaactaattgtagcggataaaacagagagag--agaagaaatacacaa 34322671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 40331075 - 40331148
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | |||| | || ||||| ||||||||||||||| || ||||| |||||||||||||||    
T  40331075 gagttctacttctgaagagatgattagaactaactgcagcggataaaactgatagagagagaagaaagacacaa 40331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 40780596 - 40780653
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| |||||||||| |||||||||||||| |||||||| |||||||    
T  40780596 gagttctgcttctgaagtgatgttcaagactaaatgcagcgcataaaacacagagaga 40780653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 700
Target Start/End: Complemental strand, 22782444 - 22782388
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||||| | || |||||| ||||| ||||||||||||||||||||||||    
T  22782444 agttctacttctgaagagacgttcagaactaattgcagcggataaaacagagagaga 22782388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 594
Target Start/End: Complemental strand, 26353025 - 26352922
Alignment:
Q  490 ttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaataagcactgatta 589  Q
    |||||||||| ||||||| ||| |||||||||| ||||  |   | |||||| ||||| ||| || ||||||||||||||||| ||||||||| ||||||    
T  26353025 ttttaaaattcaggataccatacggctaagatacgttaacaaaatatttatactaaaatttatat-catgtaaaatacttgaaaaaataagcattgatta 26352927  T
Q  590 ctctt 594  Q
    |||||    
T  26352926 ctctt 26352922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 715
Target Start/End: Complemental strand, 22786469 - 22786395
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa--acagagagagaaagaagaaagacaca 715  Q
    ||||||||||||||| | || |||||| ||||| |||||||||||||  ||| ||||||| ||||||||||||||    
T  22786469 gagttctacttctgaagagacgttcagaactaattgcagcggataaaacacacagagagagagaagaaagacaca 22786395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 485 - 576
Target Start/End: Complemental strand, 40498922 - 40498832
Alignment:
Q  485 aaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||||||||||||||||||||||  ||||||||| ||||  |     |||||| ||||||||| ||| ||||||||||||||||||||    
T  40498922 aaattttttaaaatttaggatacgatacagctaagatacgtta-aaaaaaatttatactaaaacttatatgtatgtaaaatacttgaagaaa 40498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 724
Target Start/End: Original strand, 27296764 - 27296813
Alignment:
Q  677 tgcagcggataaaacagagagagaa--agaagaaagacacaaagcaatta 724  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  27296764 tgcagcggataaaacagagagggaaagagaagaaagacacaaagcaatta 27296813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 576
Target Start/End: Complemental strand, 40364110 - 40364020
Alignment:
Q  486 aattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||||||||||||||||||||| | |||||||| ||||  |     |||||| ||||||||| ||| | ||||||||||||||||||    
T  40364110 aattttttaaaatttaggatacgatacgactaagatacgttaacaaaaaatttatactaaaacttatatgtacgtaaaatacttgaagaaa 40364020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 13085267 - 13085226
Alignment:
Q  470 gatatacggatatataaattttttaaaatttaggatacgata 511  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  13085267 gatatgcggatatataaatttttttaaatttaggatacgata 13085226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 24838442 - 24838483
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  24838442 agagagagagagaagaaagacacaaatcaattatacatgttc 24838483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 25828499 - 25828540
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  25828499 agagagagaaagaagaaagacacaaaccaattatacaggttc 25828540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 594
Target Start/End: Complemental strand, 35429280 - 35429179
Alignment:
Q  494 aaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcactgattactc 592  Q
    |||| ||||||| | ||||| ||||||||||||| ||   ||| | || ||||||| | ||||||||| ||||||||||| ||||||||| |||||||||    
T  35429280 aaaagttaggatgcaatatgactaagatatgttaataaaatttgtgtactaaaactaatatgcatgtacaatacttgaagaaaataagcattgattactc 35429181  T
Q  593 tt 594  Q
    ||    
T  35429180 tt 35429179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 708
Target Start/End: Complemental strand, 45087804 - 45087744
Alignment:
Q  649 tacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga-aagaagaa 708  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||||||||||| ||||||||    
T  45087804 tacttctgaagtgatgttcagaactagttgcaacggataaaacagagagagagaagaagaa 45087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 6391953 - 6392024
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    ||||||||||||||| ||||||||||  ||||  |||||||||| |||| |||||||  ||||||||||||||||    
T  6391953 gagttctacttctgaagtgatgttcataactacttgcagcggat-aaacggagagag--agaagaaagacacaaa 6392024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 486 - 576
Target Start/End: Complemental strand, 17329153 - 17329063
Alignment:
Q  486 aattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||| |||||||||||||||||  ||  ||||| ||||  |  ||||||||| |||||||||  || |||| |||||||||||||||    
T  17329153 aatttttttaaatttaggatacgatacagccgagatacgttaacaaattttttatactaaaacttatttgtatgtgaaatacttgaagaaa 17329063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 17964116 - 17964058
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    ||||||| ||||||||||||| | ||| ||||||| ||||| |||||||||||||||||    
T  17964116 gagttctgcttctgaggtgatttccagaactaaatagcagcagataaaacagagagaga 17964058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 28702037 - 28701991
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa 689  Q
    ||||||||||||||| ||||||||||| ||||  |||||||||||||    
T  28702037 gagttctacttctgaagtgatgttcagaactagttgcagcggataaa 28701991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 700
Target Start/End: Complemental strand, 31968586 - 31968532
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||   || |||||| ||||| ||||||||||||||||||||||||    
T  31968586 ttctacttctgaatagaagttcagaactaattgcagcggataaaacagagagaga 31968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 38631072 - 38631131
Alignment:
Q  678 gcagcggataaaacagagagagaaaga----agaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||| |||    ||||||||||||| |||||||||| ||||    
T  38631072 gcagcggataaaacagagagagagagagagaagaaagacacaaaacaattatacaagttc 38631131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 23234346 - 23234387
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  23234346 agagagagagagaagaatgacacaaagcaattatacaggttc 23234387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 733
Target Start/End: Original strand, 24376451 - 24376484
Alignment:
Q  700 aaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||||| ||||    
T  24376451 aaagaagaaagacacaaagcaattatacaggttc 24376484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 26623217 - 26623176
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||  |||||||||||||||||    
T  26623217 agagagagagagaagaaagacacgcagcaattatacatgttc 26623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 9e-29; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 29952305 - 29952213
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||    
T  29952305 gagttctacttctgaagtgatgttcaggactaaatgcaacggataaaacagagaaagagaaaaaagaaagacacaaagcaattatacaggttc 29952213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 30001459 - 30001367
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||    
T  30001459 gagttctacttctgaagtgatgttcaggactaaatgcaacggataaaacagagaaagagaaaaaagaaagacacaaagcaattatacaggttc 30001367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 45472932 - 45472808
Alignment:
Q  452 cgagtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaactta 551  Q
    |||||||||| |||||| | ||  |||||||   ||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  45472932 cgagtacgatacgatacgggtacgcggatatgcgaattttttaaaatttaggatacgatatggctaagatatgttaacaaaatttttatattaaaactta 45472833  T
Q  552 catgcatgtaaaatacttgaagaaa 576  Q
     ||| ||||||||||||||||||||    
T  45472832 tatgtatgtaaaatacttgaagaaa 45472808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 13823360 - 13823449
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  13823360 agttctaattctgaagtgatcttcaggactagatgcagcggataaaacagagagagagaaaagaaagatacaaagcaattatacatgttc 13823449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 25399123 - 25399036
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||    
T  25399123 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaacagagagaaagagagaagaaagacacaaaacaattataca 25399036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 643 - 726
Target Start/End: Complemental strand, 22804889 - 22804806
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22804889 gagttctacttttgaagtgatgttcaggtctaattgcagcggataaaacagagagagaaagaaggaggacacaaagcaattata 22804806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 41494291 - 41494381
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||| |||||| |||||| ||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||    
T  41494291 gagttctatttctgaagtgatgctcaggactagatgcagcggattaaacagagagagatggaagaaagacacaaagcaattatacaggttc 41494381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 651 - 732
Target Start/End: Original strand, 20645451 - 20645535
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgtt 732  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  20645451 cttctgaagtgatgttcagaactaaatagcagcggataaaacagagagagagaaagaagaaagacacaaagcaattatacatgtt 20645535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 6090017 - 6090109
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  6090017 gagttctacttctgaagtgatgttcgggactaacttgcagcggataaaaacagagagagaaagaagaaagacacaaagccattatacaggttc 6090109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 643 - 735
Target Start/End: Complemental strand, 38178513 - 38178417
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga----gagaaagaagaaagacacaaagcaattatacatgttcat 735  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    |||| ||||||||||||||||| ||||||||| ||||||    
T  38178513 gagttcttcttctgaagtgatgttcaggactatatgcagcggataaaacagagagagagagagagaagaaagacacaaagtaattatacaggttcat 38178417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 2025381 - 2025455
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  2025381 gagttctacttctgaagagatattcagaactaattgcagcggataaaacagagagagaaagaagaaagacacaaa 2025455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 14968658 - 14968741
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||   |||||| |||||||||||||||||||    
T  14968658 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaatagagagag--tgaagaaggacacaaagcaattataca 14968741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 19885946 - 19885889
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19885946 gagttctacttctgaagtgatgttcaggactaaatgcagcggataaaacagagagaga 19885889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 659 - 733
Target Start/End: Complemental strand, 12963938 - 12963862
Alignment:
Q  659 gtgatgttcaggactaaatgcagcggataaaacagagagagaaaga--agaaagacacaaagcaattatacatgttc 733  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||    
T  12963938 gtgatattcaggactaaatgtagcggataaaacagagagagagagagaagaaagacacaaagcaattatacaggttc 12963862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 17239797 - 17239699
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagaga--------gagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||| ||||    
T  17239797 gagttctgcttttgaagtgatgttcaggactaaatgcagcggataaaacagagagagagagagagagagaagaaagacacaaagcaattatacaggttc 17239699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 2560474 - 2560568
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||| ||||||||||||||||| | |||| ||||||||    ||||||||||||||||||||||||||||||||||||| ||||    
T  2560474 gagttctacttttgaagtgatgttcaggactaacttgcagaggataaaaacagagagagagaaagaagaaagacacaaagcaattatacaggttc 2560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 714
Target Start/End: Complemental strand, 30055044 - 30054975
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacac 714  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  30055044 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagag--agaagaaagacac 30054975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 14393863 - 14393806
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  14393863 gagttctacttctgaagtgatgttcaggactaaatgcatcggataaaatagagagaga 14393806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 659 - 733
Target Start/End: Original strand, 3237998 - 3238074
Alignment:
Q  659 gtgatgttcaggactaa-atgcagcggataaaacagagagag-aaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3237998 gtgatgttcagaactagtatgcagcggataaaacagagagagaaaagaagaaggacacaaagcaattatacaggttc 3238074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 40850267 - 40850342
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| | |||||||||||||||||||||||||  ||| |||||||||||||||    
T  40850267 gagttctacttctgaagagatgttcagaattaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 40850342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 31302638 - 31302731
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||| | |||| |||||| |||| |||||||||||||||    |||||| || | ||||||||||||||||||||||||||||||    
T  31302638 gagttctacttctaaagtgacgttcagaactatatgcagcggataaaaatagagagagcgagataagaaagacacaaagcaattatacatgttc 31302731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 723
Target Start/End: Complemental strand, 47406285 - 47406209
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    |||| |||||| ||| ||||||||||| |||| ||||||||||||||||||||||    ||||||||||||||||||||||    
T  47406285 gagtgctacttgtgaagtgatgttcagaactagatgcagcggataaaacagagag----agaagaaagacacaaagcaatt 47406209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 713
Target Start/End: Original strand, 50299530 - 50299597
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagaca 713  Q
    ||||||||||||  |||||||||| ||||  |||||||||||||||||||||||| ||||||||||||    
T  50299530 ttctacttctgaactgatgttcagaactagttgcagcggataaaacagagagagagagaagaaagaca 50299597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 726
Target Start/End: Complemental strand, 12727101 - 12727019
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||||||||| |||||||||| || ||  | ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  12727101 ttctacttctgaagtgatgttcaagaatatcttgcagcggataaaaacagagagagaaagaagaaagacacaaaacaattata 12727019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 717
Target Start/End: Complemental strand, 49669354 - 49669281
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||| ||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  49669354 gagttctacttctgaagagatattcag-actaattgcagtggataaaacagagagagagagaagaaagacacaaa 49669281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 19889807 - 19889750
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  19889807 gagttctgcttctgaagtgatgtccaggactaaatgcagcgaataaaacagagagaga 19889750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 22128375 - 22128460
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||   || |||||||||||||| ||||||  |||||||||||| ||| |||||||||| ||||    
T  22128375 gagttctacttctgaagtgatgttcaggac---atacagcggataaaacacagagag--agaagaaagacataaaacaattatacaggttc 22128460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 717
Target Start/End: Complemental strand, 46797263 - 46797188
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--agagaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||    
T  46797263 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagatagagagagaagaaagacacaaa 46797188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 52283084 - 52283161
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||||  ||||  |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  52283084 gagttctacttctgaagtgatgttcataactacctgcagcggat-aaacagagagag--agaagaaagacacaaagcaatt 52283161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 700
Target Start/End: Complemental strand, 1241940 - 1241886
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  1241940 ttctacttctgaagtgatgttcagaactagttgcagcggataaaacagagagaga 1241886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 678 - 733
Target Start/End: Complemental strand, 13781420 - 13781363
Alignment:
Q  678 gcagcggataaaacagagagaga--aagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||    
T  13781420 gcagcggataaaacagagagagagaaagaagaaagacacaaaacaattatacaggttc 13781363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 13939221 - 13939278
Alignment:
Q  678 gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  13939221 gcagcagataaaacagagagagagaaagaagaaagacacaaagcaattatacaagttc 13939278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 20628330 - 20628273
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| |||| ||||| ||||||||| |||||||||    
T  20628330 gagttctacttctgaagtgatgttcagaactagatgcaacggataaaatagagagaga 20628273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 49643632 - 49643544
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatg-cagcggataaaacagagagagaaa--gaagaaagacacaaagcaattataca 728  Q
    ||||||| ||| ||| ||||| | ||| |||||||  |||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  49643632 gagttctgcttatgaagtgatttccagaactaaataacagcggataaaacagagagagagaaggaagaaagacacaaagcaattataca 49643544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 723
Target Start/End: Complemental strand, 53057593 - 53057516
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||||  ||||| |||||||||| ||||| ||||||  ||| ||||||||||||||||||    
T  53057593 gagttctacttctgaagtgatgttcataactaattgcagcggat-aaacaaagagag--agatgaaagacacaaagcaatt 53057516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 732
Target Start/End: Original strand, 6174677 - 6174717
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgtt 732  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  6174677 agagagagagagaagaaagacacaaagcaattatacatgtt 6174717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 21640128 - 21640184
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||||| | ||| ||||| ||||| ||||||||||||||||||||||||    
T  21640128 agttctacttctgaagagatattcagaactaattgcagcggataaaacagagagaga 21640184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 22463898 - 22463846
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    |||||||||||| | ||||||||| |||| |||||||||||||||||||||||    
T  22463898 ttctacttctgaagagatgttcagaactagatgcagcggataaaacagagaga 22463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 22465356 - 22465304
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    |||||||||||| | ||||||||| |||| |||||||||||||||||||||||    
T  22465356 ttctacttctgaagagatgttcagaactagatgcagcggataaaacagagaga 22465304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 40799179 - 40799227
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac 691  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  40799179 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaac 40799227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 651 - 728
Target Start/End: Complemental strand, 8874985 - 8874902
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaaga-----agaaagacacaaagcaattataca 728  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||     ||| ||||||||||||| ||||||    
T  8874985 cttctgaagtgatgttcaggactaaatggcagtggataaaacagagagagagagagagagagagagacacaaagcaagtataca 8874902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 653 - 700
Target Start/End: Original strand, 28581380 - 28581427
Alignment:
Q  653 tctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  28581380 tctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 28581427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 694
Target Start/End: Original strand, 47206952 - 47207003
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacaga 694  Q
    ||||||||||||||| |||||||| || |||| |||||||||||||||||||    
T  47206952 gagttctacttctgaagtgatgtttagaactagatgcagcggataaaacaga 47207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 485 - 590
Target Start/End: Original strand, 52203670 - 52203774
Alignment:
Q  485 aaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcac 583  Q
    ||||||||||||||||||||||||||  |||||||||| ||||  |    ||||||| ||||||||| ||  |||||||| |||||||| ||||||||||    
T  52203670 aaattttttaaaatttaggatacgattcggctaagatacgttaacaaaaattttatactaaaacttatat--atgtaaaacacttgaagaaaataagcac 52203767  T
Q  584 tgattac 590  Q
    | |||||    
T  52203768 taattac 52203774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 2782778 - 2782832
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| ||||  ||||||| ||||||||||||||||    
T  2782778 ttctacttctgaagtgatgttcagaactagttgcagcgaataaaacagagagaga 2782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 2783168 - 2783222
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| ||||  ||||||| ||||||||||||||||    
T  2783168 ttctacttctgaagtgatgttcagaactagttgcagcgaataaaacagagagaga 2783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 704
Target Start/End: Complemental strand, 9700904 - 9700847
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaaga 704  Q
    |||||||||||| | ||||||||| |||||||||||||||||||| | |||||||||||    
T  9700904 ttctacttctgaagagatgttcagaactaaatgcagcggataaaa-atagagagaaaga 9700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 11189282 - 11189340
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||| ||| |||||||||||||||| |||||||| || ||||||||||||||    
T  11189282 gagttctacttatgaagtgatgttcaggactatatgcagcgaataaaaacagagagaga 11189340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 18122516 - 18122458
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||||| ||||| | ||| ||||||||||||||    
T  18122516 gagttctacttctgaagtgatgttcaggactagatgcaacagataaaaacagagagaga 18122458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 24776380 - 24776334
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa 689  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  24776380 gagttctacttctgaagtgatgttcagaactaattgcagcggataaa 24776334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 21639150 - 21639094
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| ||||| |||| |||||||||||||||||||    
T  21639150 gagttctacttctgaagagatgttcag-actaattgcaacggataaaacagagagaga 21639094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 51257805 - 51257724
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttg 570  Q
    ||||||||||||||||| |||||   |||||| |||||| ||  |||| |||| ||||||||| |||||| |||||||||||    
T  51257805 tttttaaaatttaggatgcgatacaactaagacatgttaataatttttgtataataaaacttaaatgcatataaaatacttg 51257724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 733
Target Start/End: Original strand, 15902485 - 15902578
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagag---agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||| ||||| | ||| ||||||| | ||| ||||||||||||   || | |||||||||||||||||||||||||||| ||||    
T  15902485 agttctgcttctgaagtgatttccagaactaaatagtagcagataaaacagaggagagggcaagaagaaagacacaaagcaattatacaggttc 15902578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Original strand, 10849932 - 10849966
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  10849932 agagagagagagaagaaagacacaaagcaattata 10849966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 16031792 - 16031850
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||||| || |||||||||| |||| ||||| ||||||||||||||||||    
T  16031792 gagttccacttctgaagtaatgttcaggatctaattgcagtggataaaacagagagaga 16031850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Complemental strand, 18122430 - 18122396
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  18122430 agagagagagagaagaaagacacaaagcaattata 18122396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 39614797 - 39614855
Alignment:
Q  537 ttatattaaaacttacatgcatgtaaaatacttgaag-aaataagcactgattactctt 594  Q
    ||||||||||| ||| ||| |||||||||| |||||| ||||||||| |||||||||||    
T  39614797 ttatattaaaatttatatgtatgtaaaatatttgaagaaaataagcattgattactctt 39614855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 1728882 - 1728829
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagaga 698  Q
    |||||||||||| | ||| ||||| |||||||||||||||||| ||||||||||    
T  1728882 ttctacttctgaagagattttcagaactaaatgcagcggataagaacagagaga 1728829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 6252762 - 6252803
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  6252762 agagagagagagaagaaagacacaaatcaattatacaggttc 6252803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 11222085 - 11222141
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| | ||||||||||| ||||  |||||||||| |||||||||||||    
T  11222085 gagttctacttctaaagtgatgttcagaactagttgcagcggat-aaacagagagaga 11222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 11222837 - 11222893
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| | ||||||||||| ||||  |||||||||| |||||||||||||    
T  11222837 gagttctacttctaaagtgatgttcagaactagttgcagcggat-aaacagagagaga 11222893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 12967610 - 12967690
Alignment:
Q  651 cttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||| ||||| | |||||||||||||||||||   | | ||| |||||||||||||||| |||||||||| ||||    
T  12967610 cttctgaagtgatattcagaatctaaatgcagcggataaaa---acatagagagaagaaagacacaaatcaattatacaagttc 12967690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 13410855 - 13410814
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  13410855 agagagagagaagagaaagacacaaagcaattatacatgttc 13410814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 19885873 - 19885832
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  19885873 agagagagagagaagaaagacacaaaacaattatacaggttc 19885832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 725
Target Start/End: Complemental strand, 19889730 - 19889697
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattat 725  Q
    ||||||||| ||||||||||||||||||||||||    
T  19889730 agagagagagagaagaaagacacaaagcaattat 19889697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 527
Target Start/End: Original strand, 26016118 - 26016155
Alignment:
Q  490 ttttaaaatttaggatacgatatggctaagatatgtta 527  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  26016118 ttttaaaatttaggatactatattgctaagatatgtta 26016155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 26418494 - 26418453
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  26418494 agagagagagaaaagaaagacacaaagcaattatacaggttc 26418453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 28581447 - 28581488
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||    
T  28581447 agagagagagagaggaaagacacaaagcaattatacaggttc 28581488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 46350709 - 46350623
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| |||  |||||| ||| |||| ||||||| ||||||||||| ||    |||||||| ||||||| |||||||||| ||||    
T  46350709 gagttctacttttgaaatgatgtgcagaactagatgcagcagataaaacagaaag----agaagaaatacacaaatcaattatacaggttc 46350623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 680
Target Start/End: Complemental strand, 49554378 - 49554341
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgca 680  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  49554378 gagttctacttctgaagtgatgttcaggactagatgca 49554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 20113495 - 20113408
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac--agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  20113495 gagttctacttctgaagtgatgttcagaactaaatgcagcggataaaactgagagagagagagaagaaagacacaaagcaattataca 20113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 16876195 - 16876276
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  16876195 gagttctgcttctgaagtgatgttcagaactaaatgcagcggataaaaacagagagagaaggaagaaagacacaaagcaatt 16876276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 19623282 - 19623362
Alignment:
Q  651 cttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  19623282 cttctgaagtgatgttcagaactaattgcagcggataaaac--agagagaaagaagaaagacacaaagcaattatacaggttc 19623362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 643 - 723
Target Start/End: Original strand, 22801430 - 22801512
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  22801430 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaagagagagaaagagagaagaaagacacaaagcaatt 22801512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 489 - 595
Target Start/End: Complemental strand, 8486371 - 8486266
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaataagcactgatt 588  Q
    ||||||||||||||||||||||| |||||||||| | ||  |  ||||||||| ||||||||| || ||||||||||| ||||||||||||||| |||||    
T  8486371 tttttaaaatttaggatacgatacggctaagatacgataacaa-ttttttatactaaaacttatattcatgtaaaatagttgaagaaataagcattgatt 8486273  T
Q  589 actcttg 595  Q
    | |||||    
T  8486272 aatcttg 8486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 21624379 - 21624474
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa-----acagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||||||| ||||||||||||| || ||||||||||| ||     | ||||||||||||||||||||||||||||||||||||| ||||    
T  21624379 gagttttacttctgaagtgatgttcaggaatagatgcagcggattaaaatagagagagagagaaagaagaaagacacaaagcaattatacaagttc 21624474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 643 - 714
Target Start/End: Complemental strand, 19066876 - 19066803
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacac 714  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||    
T  19066876 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacac 19066803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 725
Target Start/End: Original strand, 13435172 - 13435260
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac-----agagagagaaagaagaaagacacaaagcaattat 725  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||      ||||| ||||||||||||||||||||||||||||    
T  13435172 gagttctacttctgaagtgatgttcaggactaacttgcagcggataaaaactgagagagatagaaagaagaaagacacaaagcaattat 13435260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 576
Target Start/End: Original strand, 2987913 - 2988040
Alignment:
Q  449 gtacgagtacgatgcgatacagatatacggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaac 548  Q
    ||||||||||||| |||||| | || ||||||| || ||||||| |||||||||||||||||| |||||||||| ||||  |      ||||| |||| |    
T  2987913 gtacgagtacgatacgatacgggtacacggatacatgaatttttcaaaatttaggatacgatacggctaagatacgttaacaaaaacattatactaaacc 2988012  T
Q  549 ttacatgcatgtaaaatacttgaagaaa 576  Q
    ||| ||| ||||||||||||||||||||    
T  2988013 ttatatgtatgtaaaatacttgaagaaa 2988040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 15986649 - 15986731
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| |||||| ||||||| |    ||||||||||||||||||||||||    
T  15986649 gagttctacttatgaagtgatgttcaggactaattgcagcgtataaaaaagagagata---gagaaagacacaaagcaattataca 15986731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 16528602 - 16528693
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||| |||||| |||||||||| |||||||| | || |||||||||||||||| | |||| ||||||||||| |||||||||| ||||    
T  16528602 gagttctatttctgaagtgatgttcatgactaaattggagtggataaaacagagagaaagagaataaagacacaaaacaattatacaggttc 16528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 651 - 733
Target Start/End: Original strand, 25929779 - 25929861
Alignment:
Q  651 cttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| |||||||||||   ||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||||    
T  25929779 cttctgaagtgatgttcagattctaaatgcagcggataaaa-acagagagagagaagaaagacacaaagcaattatacaggttc 25929861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 21234446 - 21234500
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  21234446 ttctacttctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 21234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 25593394 - 25593451
Alignment:
Q  678 gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  25593394 gcagcggataaaacagagagagagaaagaagaaagacacaaagcaattatacaggttc 25593451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 16333016 - 16333073
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||    
T  16333016 gagttctacttctgaagtgatgttcagaactaattccagcggataaaacagagagaga 16333073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 20731568 - 20731511
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||  |||| |||||||||||||||||||||||||    
T  20731568 gagttctacttctgaagtgatgttcaaaactagatgcagcggataaaacagagagaga 20731511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 24116105 - 24116162
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  24116105 gagttctgcttctgaagtaatgttcaagactaaatgcagcggataaaacagagagaga 24116162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 29917325 - 29917410
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||||  ||||||||||||||| ||| ||||||||||||||||||    ||||||||| ||||||||||||||||| ||||    
T  29917325 gagttccacttctgaactgatgttcaggactagatgtagcggataaaacagagag----agaagaaag-cacaaagcaattatacaagttc 29917410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 32543550 - 32543607
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  32543550 gagttccacttctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 32543607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 13601454 - 13601549
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga----aagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| | ||| ||||| | ||||| |||||||||||||||||    |||||||||||||||||||||||||||| ||||    
T  13601454 gagttctgcttctgaagtgatttccagaactaagtagcagcagataaaacagagagagagaaaaagaagaaagacacaaagcaattatacaggttc 13601549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 678 - 733
Target Start/End: Original strand, 15301541 - 15301598
Alignment:
Q  678 gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  15301541 gcagcggataaaacagagagagagaaagaagaaagacacaaaacaattatacaggttc 15301598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 19952448 - 19952390
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagagaga 700  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||    
T  19952448 gagttctacttctgatgtcatgttcaggactagatgcagcggataagaacagagagaga 19952390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 22077233 - 22077177
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||    
T  22077233 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagaga 22077177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 33353109 - 33353052
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||||||||||||||||||    
T  33353109 gagttctacttctgaagagatattcagaactaattgcagcggataaaacagagagaga 33353052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 728
Target Start/End: Original strand, 26941777 - 26941813
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    |||||||||||||||||||||||||||||||||||||    
T  26941777 agagagagaaagaagaaagacacaaagcaattataca 26941813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 18377714 - 18377761
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  18377714 gagttctacttctgaagtgatgttcagaactagatgcagcggataaaa 18377761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 678 - 733
Target Start/End: Complemental strand, 14732941 - 14732884
Alignment:
Q  678 gcagcggataaaacagagag--agaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||||| ||||    
T  14732941 gcagcagataaaacagaaagcgagaaagaagaaagacacaaagcaattatacaggttc 14732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 21617540 - 21617613
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||||||||  ||||| |||||||| ||||| | ||||||| ||||||||||||||||    
T  21617540 gagttctacttctgaagagatgttcataactaattgcagcgggtaaaa-atagagagagagaagaaagacacaaa 21617613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 715
Target Start/End: Original strand, 18912704 - 18912776
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagag--agaaagaagaaagacaca 715  Q
    |||||||||||| | ||||||||  |||||||||||||||||| |||||||||  ||| ||||||||||||||    
T  18912704 ttctacttctgaagagatgttcataactaaatgcagcggataagaacagagagaaagagagaagaaagacaca 18912776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 19085419 - 19085476
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| |||||| ||||||| ||||||||  |||||||||||||||||    
T  19085419 gagttctgcttctgaagtgatggtcaggacaaaatgcagtagataaaacagagagaga 19085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 23296128 - 23296169
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  23296128 agagagagagagaagaaagacacaaagcaattatacaggttc 23296169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 25591964 - 25592005
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  25591964 agagagagaaagaagaaagacacatagcaattatacaggttc 25592005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 728
Target Start/End: Original strand, 18434880 - 18434916
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18434880 agagagagagagaagaaagacacaaagcaattataca 18434916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 728
Target Start/End: Original strand, 19085500 - 19085536
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19085500 agagagagagagaagaaagacacaaagcaattataca 19085536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 19688021 - 19688076
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||||| ||||||||||  |||| ||||||||||||||| |||||||||    
T  19688021 agttctacttctgaagtgatgttcaaaactagatgcagcggataaaa-agagagaga 19688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 12041148 - 12041195
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  12041148 gagttctacttctaaagtgatgttcagaactagatgcagcggataaaa 12041195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 12422528 - 12422575
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaa 690  Q
    ||||||||||||||| | ||||||||| ||||| ||||||||||||||    
T  12422528 gagttctacttctgaagagatgttcagaactaattgcagcggataaaa 12422575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 15532492 - 15532434
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa-acagagagaga 700  Q
    ||||||||||||||| |||||||||| ||||| ||| || ||||||| |||||||||||    
T  15532492 gagttctacttctgaagtgatgttcaagactagatgtagtggataaacacagagagaga 15532434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 689
Target Start/End: Original strand, 17380850 - 17380896
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa 689  Q
    ||||||||||||||| |||||||| || ||||| |||||||||||||    
T  17380850 gagttctacttctgaagtgatgtttagaactaattgcagcggataaa 17380896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 14101245 - 14101204
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||||||||| ||| |||||||||| ||||    
T  14101245 agagagagaaagaagaaagacataaatcaattatacaggttc 14101204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 17876783 - 17876824
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| || |||||||||||||||||||||||| ||||    
T  17876783 agagagagagaggagaaagacacaaagcaattatacaagttc 17876824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 19625152 - 19625193
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  19625152 agagagagagagaagaaagacacaaatcaattatacaagttc 19625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 32335184 - 32335225
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| |||||||| |||||||||||||||||||||| ||||    
T  32335184 agagaaagaaagaaaaaagacacaaagcaattatacaggttc 32335225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 7184 - 7276
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac--agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||| ||||||||||  ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||    
T  7184 gagttctacttttgaagtgatgttcacaactaaatgcagcggataaaaataagagagagaaagaagaaagacacaaagcaattatacaggttc 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 20287 - 20197
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||| ||||    
T  20287 gagttctgcttctgaagtgatattcagaactaaatgcagcggataaaacagagaaagagagaagaaagatacaaaacaattatacaggttc 20197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 110414 - 110358
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||  ||||| ||||| ||||||||||||||||||    
T  110414 gagttctacttctgaagagatgttcaa-actaattgcagtggataaaacagagagaga 110358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 10756723 - 10756806
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||    
T  10756723 ttctacttctggagtgatgttcagaactaaatgcagcggataaaacagagag----agaagaaagacacaaatcaattatacatgttc 10756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 645 - 733
Target Start/End: Complemental strand, 26702917 - 26702828
Alignment:
Q  645 gttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||| ||||||||||| |||| || ||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||    
T  26702917 gttctacttctgaagtgatgttcagaactagattgcagcggataaaacagagagaaagagaagaaagatacaaagcaattatacaggttc 26702828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 22600978 - 22600884
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagagaaaga---agaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||   ||| |||||||||||||||||||| ||||    
T  22600978 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaaacagagagagagagagagagagagacacaaagcaattatacaggttc 22600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 23037315 - 23037258
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  23037315 gagttctacttctgaagtgatgttcaggactagatgcagcggataaaacagagagaga 23037258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 643 - 729
Target Start/End: Original strand, 1899634 - 1899725
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac-----agagagagaaagaagaaagacacaaagcaattatacat 729  Q
    ||||||||||||| | |||||||||| ||||| |||||||||||||||      ||||||||| ||||||||||||||||||||||||||||    
T  1899634 gagttctacttctaaagtgatgttcatgactagatgcagcggataaaaacagagagagagagagagaagaaagacacaaagcaattatacat 1899725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 717
Target Start/End: Complemental strand, 44824544 - 44824473
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaa 717  Q
    |||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  44824544 agttctacttctgaagagatgttcagaactaattgcagcggataaaacagagagag--agaagaaagacacaaa 44824473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 647 - 733
Target Start/End: Original strand, 2833947 - 2834039
Alignment:
Q  647 tctacttctgaggtgatgttcaggactaaatgcagcggataaaac------agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||      ||||||||| |||||||||||||||| |||||||||| ||||    
T  2833947 tctacttctgaagtgatgttcagaactagatgcagcggataaaacagagagagagagagagagaagaaagacacaaaacaattatacaagttc 2834039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 717
Target Start/End: Complemental strand, 21121854 - 21121778
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| ||||||| ||||||||    
T  21121854 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaggacacaaa 21121778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 21983886 - 21983962
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaaa 717  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||    
T  21983886 gagttctacttctgaagagatgttcagaactaaatgcagcggataaaacagagagaaagagaaaagaaagacacaaa 21983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 21215466 - 21215391
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  21215466 gagttctacttttgaagagatgttcagaactaaatgcagcggataaaacagagagaaagacagaagaaagacacaa 21215391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 46088279 - 46088354
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  46088279 gagttctacttctgaaaagatgttcagaactaaatgcagcggataaaacagagagaaagagagaagaaagacacaa 46088354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 14264217 - 14264149
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    |||||||||||| ||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||    
T  14264217 ttctacttctgaagtgatgttcagaactagttgcagcggataaaacagagagag--agaagaaagacacaa 14264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 36133498 - 36133586
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| ||||| ||| ||||||||| |||||| ||||||||||||||| | ||||||  |||||||||| |||||||||||||||| ||||    
T  36133498 gagttttacttatgaagtgatgttcgggactagatgcagcggataaaaaacagagag--agaagaaagaaacaaagcaattatacaggttc 36133586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 533 - 595
Target Start/End: Complemental strand, 16123163 - 16123101
Alignment:
Q  533 ttttttatattaaaacttacatgcatgtaaaatacttgaagaaataagcactgattactcttg 595  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  16123163 ttttttatactaacacttatatgcatgtaaaatacttgaagaaataaacattgattactcttg 16123101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 12283680 - 12283737
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  12283680 gagttctccttctgaaatgatattcaggactaaatgcagcggataaaacagagagaga 12283737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 29215087 - 29215160
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||||||||||||||| ||| |||||| ||||||||    
T  29215087 gagttccacttctgaagtgatattcagaactagatgcagcggataaaacagagaaagagagaagagagacacaa 29215160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 21135949 - 21135874
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||  ||| ||||||| |||||||    
T  21135949 gagttctacttctgaagagatgttcagaactaaatacagcggataaaacagagagaaagagagaagaaggacacaa 21135874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 733
Target Start/End: Complemental strand, 32786729 - 32786636
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaa----gaagaaagacacaaagcaattatacatgttc 733  Q
    ||||| |||||||| |||||||||   | || ||||||||||||||||||||||||| |    |||||||||||||||||||||||||| ||||    
T  32786729 agttccacttctgaagtgatgttcgtaattagatgcagcggataaaacagagagagagaaagagaagaaagacacaaagcaattatacaggttc 32786636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 21205651 - 21205596
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga 698  Q
    ||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||    
T  21205651 gagttctacttttgaagagatgttcagaactaaatgcagcggataaaacagagaga 21205596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 1577136 - 1577194
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||    
T  1577136 gagttctacttctgaagtgatgtttaggactagatgcagcggataaaaacagagagaga 1577194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 10250280 - 10250355
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagag--agagaaagaagaaagacacaaa 717  Q
    ||||||||||||| | | ||||||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||    
T  10250280 gagttctacttctaaagagatgttcag-actaattgcagcggataaaacagagatagagagagaagaaagacacaaa 10250355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 576
Target Start/End: Original strand, 11767467 - 11767556
Alignment:
Q  487 attttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||| |||||||||||||||||| || ||||||| ||||  |   |||||||| |||||| || ||| ||||||||||||||||||||    
T  11767467 atttttcaaaatttaggatacgatacggttaagatacgttaacaaaatttttatactaaaacatatatgtatgtaaaatacttgaagaaa 11767556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 30892352 - 30892409
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||||||| |||||||||    
T  30892352 gagttctacttctaaagtgatgttcagaactaaatgcaacggataaaatagagagaga 30892409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 732
Target Start/End: Complemental strand, 22465549 - 22465509
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgtt 732  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  22465549 agagagagaaagaagaaagacataaagcaattatacatgtt 22465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 22428130 - 22428036
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaa-caga--gagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||||||||  |||||||||| ||||| | ||||| ||||||| ||||  |||||||| |||||||||||||| |||||||||| ||||    
T  22428130 gagttctacttctgaaatgatgttcagaactaacttgcagcagataaaaacagatagagagaaataagaaagacacaaatcaattatacaggttc 22428036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 2266373 - 2266430
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| |||||||  |  |||| |||||||||||||||||||||||||    
T  2266373 gagttctacttctgaagtgatgtatataactagatgcagcggataaaacagagagaga 2266430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 28493020 - 28492979
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  28493020 agagagagagagaagaaagacacaaagcaattatacaggttc 28492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 569
Target Start/End: Complemental strand, 31183896 - 31183803
Alignment:
Q  476 cggatatataaattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatactt 569  Q
    |||||||  ||| ||||||||||||||||||||||| |||||||||| ||||  |   | |||||  ||||| ||| |||||||||||||||||    
T  31183896 cggatatgcaaaatttttaaaatttaggatacgatacggctaagatacgttaacaaaatatttattctaaaatttatatgcatgtaaaatactt 31183803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 33257090 - 33257049
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  33257090 agagagagagagaagaaagacacaaagcaattatacaagttc 33257049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 33277262 - 33277221
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  33277262 agagagagagagaagaaagacacaaagcaattatacaagttc 33277221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 38281907 - 38281948
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  38281907 agagagagatagaagaaagacacaaagcaattatacaggttc 38281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 48571044 - 48570987
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||| | | ||||||||  ||||| ||||||||||||||||||||||||    
T  48571044 gagttctacttctaaagagatgttcataactaattgcagcggataaaacagagagaga 48570987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 728
Target Start/End: Complemental strand, 22202473 - 22202437
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||| |||||||||||||||||||||||||||    
T  22202473 agagagagagagaagaaagacacaaagcaattataca 22202437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 692 - 728
Target Start/End: Original strand, 30892435 - 30892471
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30892435 agagagagagagaagaaagacacaaagcaattataca 30892471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 569
Target Start/End: Complemental strand, 50709880 - 50709801
Alignment:
Q  489 tttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatactt 569  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||   | |||||| ||||| ||| |||||||||||||||||    
T  50709880 tttttaaaatt-aggatacgatacggctaagatacgttaataaaatatttatactaaaatttatatgcatgtaaaatactt 50709801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 576
Target Start/End: Complemental strand, 271362 - 271319
Alignment:
Q  533 ttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    ||||||||||||||||||| || |||||||| ||||||||||||    
T  271362 ttttttatattaaaacttatattcatgtaaattacttgaagaaa 271319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 22153113 - 22153172
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaa-atgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||| ||||||||||||||    
T  22153113 gagttctacttctgaagtgatgttcaggacaaacttgcagcggataaaaacagagagaga 22153172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 22202551 - 22202493
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| ||||| | ||| ||||||| |||||||||||||||||||||||    
T  22202551 gagttctgcttctgacgtgatttccagaactaaatagcagcggataaaacagagagaga 22202493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 22202673 - 22202615
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    ||||||| ||||||| ||||| | ||| ||||||| |||||||||||||||||||||||    
T  22202673 gagttctgcttctgacgtgatttccagaactaaatagcagcggataaaacagagagaga 22202615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Original strand, 23053716 - 23053750
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||||| ||||||||||||||||||||||||||    
T  23053716 agagagaggaagaagaaagacacaaagcaattata 23053750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 25449379 - 25449333
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaa 689  Q
    ||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  25449379 gagttatacttctgaagtgatgttcagaactaattgcagcggataaa 25449333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 594
Target Start/End: Complemental strand, 2137170 - 2137129
Alignment:
Q  553 atgcatgtaaaatacttgaagaaataagcactgattactctt 594  Q
    |||||||||||||||||||| ||||||||| | |||||||||    
T  2137170 atgcatgtaaaatacttgaaaaaataagcattaattactctt 2137129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 9346119 - 9346160
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  9346119 agagagagataagagaaagacacaaagcaattatacatgttc 9346160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 16236045 - 16236004
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  16236045 agagagagagagaagaaagacacaaaacaattatacaggttc 16236004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Original strand, 30571489 - 30571537
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||||||||||| | ||||||||| | ||||||||||||||||||||    
T  30571489 gagttctacttctgaagagatgttcagaa-taaatgcagcggataaaaca 30571537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 690
Target Start/End: Original strand, 38281651 - 38281699
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaat--gcagcggataaaa 690  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||    
T  38281651 agttctacttctgaagtgatgttcaggactagatgcgcagcggataaaa 38281699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 687
Target Start/End: Original strand, 42283933 - 42283974
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggata 687  Q
    |||||||||||| | ||||||||| |||||||||||||||||    
T  42283933 ttctacttctgaagagatgttcagaactaaatgcagcggata 42283974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 645 - 726
Target Start/End: Original strand, 18327 - 18408
Alignment:
Q  645 gttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattata 726  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||| ||| ||||||| |||||||    
T  18327 gttccacttctgaagtgatgttcagaactaaatgcagcggataaaacaaagagagagagaaggaagccacaaagaaattata 18408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 22978 - 22929
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaaca 692  Q
    ||||||||||||||| | ||||||||  ||||| ||||||||||||||||    
T  22978 gagttctacttctgaagagatgttcaaaactaattgcagcggataaaaca 22929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 14403 - 14501
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac--------agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||| ||||    
T  14403 gagttctgcttttgaagtgatgttcaggactaaatgcagcggataaaacagagagagagagagagagagaagaaagacacaaagcaattatacaggttc 14501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 680 - 733
Target Start/End: Original strand, 31916 - 31969
Alignment:
Q  680 agcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31916 agcggataaaacagagagagaaagaagaaagacacaaagcaattatacaggttc 31969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 10929 - 10835
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||||| | |||||||| ||||    ||||||||||||||||||||||||| ||||||||||| ||||    
T  10929 gagttctacttctgaagtgatgttcaggactaacttgcagcggaaaaaaacagagagagagaaagaagaaagacacaatgcaattatacaggttc 10835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 15593 - 15499
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaac---agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||| ||||||||||||||||| | |||||||| ||||    ||||||||||||||||||||||||| ||||||||||| ||||    
T  15593 gagttctacttctgaagtgatgttcaggactaacttgcagcggaaaaaaacagagagagagaaagaagaaagacacaatgcaattatacaggttc 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 672 - 733
Target Start/End: Original strand, 7983 - 8042
Alignment:
Q  672 ctaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7983 ctaattgcagcggataaaacagagagaga--gaagaaagacacaaagcaattatacatgttc 8042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 652 - 733
Target Start/End: Original strand, 211658 - 211739
Alignment:
Q  652 ttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| ||||||||||||| ||| | ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  211658 ttctgaagtgatgttcaggaataacttgcagcggataaaa-acagagagaaagaagaaagacacaaagcaattatacaagttc 211739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 5421 - 5493
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||| ||| | ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  5421 gagttctacttttgaagagatgttcag-actaattgcagcggataaaacagagagagagagaagaaagacacaa 5493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 35565 - 35490
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  35565 gagttctacttctgaagagatgttcagaactaaatgcagcggatagaacagagagaaagagagaagaaagacacaa 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 18581 - 18510
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| || || |||||||||||||||||||||||  |||||||||||||||    
T  18581 gagttctacttctgaagagatgttcagaacaaattgcagcggataaaacagagagag--agaagaaagacacaa 18510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 700
Target Start/End: Complemental strand, 771 - 717
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  771 ttctacttctgaagtgatgttcagaactagatgcagcggataaaacagagagaga 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 486 - 576
Target Start/End: Original strand, 38256 - 38346
Alignment:
Q  486 aattttttaaaatttaggatacgatatggctaagatatgttagtaggttttttatattaaaacttacatgcatgtaaaatacttgaagaaa 576  Q
    |||||||| ||||| ||||||  ||| |||||||||| ||||  |  ||||||||||||||||||| ||| ||||||||||||||||||||    
T  38256 aatttttttaaattaaggataaaatacggctaagatacgttaacaaattttttatattaaaacttatatgtatgtaaaatacttgaagaaa 38346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 726
Target Start/End: Original strand, 1950 - 2037
Alignment:
Q  643 gagttctacttctgaggtgatgttcag-gactaaatgcagcggataa---aacagagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||| |||||||| ||||||||||| | |||||||||||||||||   || ||| ||||| |||||||||||||||||||||||||    
T  1950 gagttcaacttctgaagtgatgttcagagtctaaatgcagcggataagtaaagagaaagagagagaagaaagacacaaagcaattata 2037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 651 - 728
Target Start/End: Original strand, 14264 - 14344
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||| ||||| | ||| ||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  14264 cttctgaagtgatttccagaactaaatagcagcggataaaacagagagagagaaagaataaagacacaaagcaattataca 14344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 733
Target Start/End: Complemental strand, 37558 - 37473
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||| ||| |||  |||||||||||||||| ||||||||||||| |||||||||||    ||||||||||||||||||||||| ||||    
T  37558 gagttcttcttttgaattgatgttcaggactaattgcagcggataaa-cagagagagaa----gaaagacacaaagcaattatacaggttc 37473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 651 - 728
Target Start/End: Original strand, 1306 - 1386
Alignment:
Q  651 cttctgaggtgatgttcaggactaaat-gcagcggataaaacagag--agagaaagaagaaagacacaaagcaattataca 728  Q
    ||||||| ||||| | ||| ||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  1306 cttctgaagtgatttccagaactaaatagcagcggataaaacagagagagagaaagaataaagacacaaagcaattataca 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 1639 - 1564
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| |||||||| || |||||||||||||||  ||| |||||||||||||||    
T  1639 gagttctacttctgaagagatgttcagaactaaatgtagtggataaaacagagagaaagagagaagaaagacacaa 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 647 - 723
Target Start/End: Complemental strand, 24594 - 24515
Alignment:
Q  647 tctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagag--agagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||| ||||||||||| ||||| |||||||||| |||||||||  |||||| ||||||||||||| |||||||    
T  24594 tctacttctgaagtgatgttcagaactaattgcagcggataaaaacagagatagagaaggaagaaagacacagagcaatt 24515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 644 - 716
Target Start/End: Original strand, 11489 - 11563
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagaga--gaaagaagaaagacacaa 716  Q
    ||||| |||||||| | ||||||||| |||||||||||||||||||||| |||||  || |||||||||||||||    
T  11489 agttccacttctgaagagatgttcagaactaaatgcagcggataaaacatagagaaggagagaagaaagacacaa 11563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 726
Target Start/End: Complemental strand, 378373 - 378283
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaat-gcagcggataaaacagagagaga------aagaagaaagacacaaagcaattata 726  Q
    ||||||| ||||||| ||||| | ||| ||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  378373 gagttctgcttctgaagtgatttccagaactaaatagcagcggataaaacagagagagagagagaaagaagaaagacacaaagcaattata 378283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 714
Target Start/End: Original strand, 210693 - 210765
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaac--agagagagaaagaagaaagacac 714  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||||  ||||||||| |||||||||||||    
T  210693 gagttctacttctgaagagatgttcag-actaattgcagcggataaaacagagagagagagagaagaaagacac 210765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 219527 - 219618
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaac-----agagagagaaagaagaaagacacaaagcaattataca 728  Q
    |||||| |||||||| ||||| |||| || ||||| |||||||||||||      ||||||||| |||||||||||||||||||||||||||    
T  219527 gagttccacttctgaagtgatattcatgatctaaacgcagcggataaaaacagagagagagagagagaagaaagacacaaagcaattataca 219618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 245049 - 245008
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  245049 agagagagagagaagaaagacacaaagcaattatacaggttc 245008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 716
Target Start/End: Original strand, 2741 - 2814
Alignment:
Q  642 tgagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaa 716  Q
    |||||||||||||||| | ||||| ||| ||||| |||||||||||||| | ||||||| |||||||||||||||    
T  2741 tgagttctacttctgaagagatgtccagaactaattgcagcggataaaa-acagagagagagaagaaagacacaa 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 6546 - 6488
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagagaga 700  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||    
T  6546 gagttctacttctgaagtgatgttcaagactagatgcagcggataaaaacagagagaga 6488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 6458 - 6417
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  6458 agagagagagagaagaatgacacaaagcaattatacaggttc 6417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 2258 - 2315
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||| | |||| ||| |||||||||||||||||||||    
T  2258 gagttctacttctgaagtgatgttctgaactagatgtagcggataaaacagagagaga 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 9248 - 9289
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  9248 agagagagaaagaagaaagacacaaagcaattatacaggttc 9289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 19476 - 19419
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||| ||| |||||    
T  19476 gagttctacttctgacgtgatgttcagaactagatgcagcggataaaatagatagaga 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 3505 - 3448
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||||| |||||||||    
T  3505 gagttctacttctgaagagatgttcagaactaattgcagcggataaaatagagagaga 3448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 645 - 733
Target Start/End: Original strand, 7121 - 7207
Alignment:
Q  645 gttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||| |||||||| |||||||  || |||| ||||| ||||||||||||||||||  ||||| |||||||||| |||||||||| ||||    
T  7121 gttccacttctgaagtgatgtcgagaactagatgcaccggataaaacagagagag--agaaggaagacacaaatcaattatacaggttc 7207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 28196 - 28155
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  28196 agagagagaaagaagaaagacacaaagcaattatacaggttc 28155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 7971 - 8012
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  7971 agagagagagagaagaaagacacaaagcaattatacatgttc 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 711
Target Start/End: Complemental strand, 79181 - 79112
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggata-aaacagagagagaaagaagaaaga 711  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||| ||| ||||||||| ||||| ||||    
T  79181 gagttctacttctgaagtgatgttcagaactaattgcagcggatagaaaaagagagagagagaaggaaga 79112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1281 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1281
Description:

Target: scaffold1281; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 732
Target Start/End: Complemental strand, 2153 - 2113
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgtt 732  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  2153 agagagagagagaagaaagacacaaagcaattatacatgtt 2113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 88420 - 88345
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagag--agaaagaagaaagacacaa 716  Q
    ||||||||||||||| | ||||||||| ||||  |||||||||||||||||||||  ||  |||||||||||||||    
T  88420 gagttctacttctgaagagatgttcagaactagttgcagcggataaaacagagagaaagggagaagaaagacacaa 88345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 16533 - 16460
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaa---acagagagagaaagaagaaagacacaa 716  Q
    |||||||||||| | ||||||||| ||||| |||||||||||||   | ||||||||| |||||||||||||||    
T  16533 ttctacttctgaagagatgttcagaactaattgcagcggataaaaacagagagagagagagaagaaagacacaa 16460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 723
Target Start/End: Original strand, 63629 - 63711
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaaca--gagagagaaagaagaaagacacaaagcaatt 723  Q
    ||||||||||| || ||| ||||||| ||||| |||||||||| ||||||  |||| |||| |||||||||||||||||||||    
T  63629 agttctacttcagaagtgttgttcagaactaattgcagcggataaaaacagggagaaagaaggaagaaagacacaaagcaatt 63711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 723
Target Start/End: Original strand, 45958 - 46037
Alignment:
Q  644 agttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagagaaagaagaaag-acacaaagcaatt 723  Q
    ||||||||||| || ||| ||||||| ||||| ||||||| |||||| | ||||||||||||| ||| |||||||||||||    
T  45958 agttctacttcagaagtgttgttcagaactaattgcagcgtataaaa-acagagagaaagaaggaagcacacaaagcaatt 46037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 726
Target Start/End: Original strand, 9290 - 9340
Alignment:
Q  677 tgcagcggataaaa-cagagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  9290 tgcagcggataaaaacagagagacaaagaagaaacacacaaagcaattata 9340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 726
Target Start/End: Original strand, 18543 - 18577
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    |||||||||||||||||||||||||||||||||||    
T  18543 agagagagaaagaagaaagacacaaagcaattata 18577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 700
Target Start/End: Original strand, 17623 - 17677
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||||||||| ||||||||||| ||||  | ||||||||||||||||||||||    
T  17623 ttctacttctgaagtgatgttcagaactagttccagcggataaaacagagagaga 17677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 420 - 379
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  420 agagagagaaagaagaatgacacaaagcaattatacaggttc 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 700
Target Start/End: Complemental strand, 488 - 446
Alignment:
Q  659 gtgatgttcaggactaaat-gcagcggataaaacagagagaga 700  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  488 gtgatgttcaggactaacttgcagcggataaaacagagagaga 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 9299 - 9340
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  9299 agagagagaaagaagaatgacacaaagcaattatacaggttc 9340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 1001 - 1042
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  1001 agagagagagagaagaaagacacaaagcaattatacaggttc 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 2828 - 2787
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  2828 agagagagagagaagaaagacacaaagcaattatacaagttc 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 25717 - 25765
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaa-atgcagcggataaaa 690  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  25717 gagttctacttctgaagtgatgttcaggactaacttgcagcggataaaa 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 25802 - 25843
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    |||||||||| ||| |||||||||||||||||||||| ||||    
T  25802 agagagagaaggaaaaaagacacaaagcaattatacaggttc 25843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 682 - 726
Target Start/End: Complemental strand, 2796 - 2750
Alignment:
Q  682 cggataaaacagagagaga--aagaagaaagacacaaagcaattata 726  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  2796 cggataaaacagagagaaagtaagaagaaagacacaaagcaattata 2750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 704
Target Start/End: Complemental strand, 6086 - 6027
Alignment:
Q  646 ttctacttctgaggtgatgttcaggactaaatgcagcggataa-aacagagagagaaaga 704  Q
    |||||||||||| | ||||||||| |||||||||| ||||||| |||||||||| |||||    
T  6086 ttctacttctgaagagatgttcagaactaaatgcaacggataagaacagagagaaaaaga 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 733
Target Start/End: Original strand, 158435 - 158528
Alignment:
Q  643 gagttctacttctgaggtgatgttcagga-ctaaatgcagcggataaaacagagagagaa----agaagaaagacacaaagcaattatacatgttc 733  Q
    |||||| |||||||| ||||||||||  | ||||  ||||||||||||||| |||||||     ||||||||||||||||||||||||||| ||||    
T  158435 gagttccacttctgaagtgatgttcataatctaa--gcagcggataaaacatagagagagggagagaagaaagacacaaagcaattatacaggttc 158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Original strand, 73924 - 73958
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  73924 agagagagagagaagaaagacacaaagcaattata 73958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 102844 - 102902
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaa-atgcagcggataaaacagagagaga 700  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||||||  |||||||||    
T  102844 gagttctacttctgaagtgatgttcaggactaacttgcagtggataaagaagagagaga 102902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 726
Target Start/End: Original strand, 102912 - 102946
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattata 726  Q
    ||||||||| |||||||||||||||||||||||||    
T  102912 agagagagagagaagaaagacacaaagcaattata 102946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 2549 - 2508
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||| |||||||||||||| ||||    
T  2549 agagagagagagaagaaagacaaaaagcaattatacaggttc 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 7244 - 7203
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  7244 agagagagagagaagaaagacacaaaacaattatacaggttc 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 7268 - 7309
Alignment:
Q  692 agagagagaaagaagaaagacacaaagcaattatacatgttc 733  Q
    ||||||||| |||||||||||||| |||||||||||| ||||    
T  7268 agagagagagagaagaaagacacatagcaattatacaggttc 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 716
Target Start/End: Complemental strand, 145270 - 145194
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggat-aaaacagagaga--gaaagaagaaagacacaa 716  Q
    ||||||||||||||| | |||| |||| ||||| |||| ||||| ||||||||||||  || |||||||||||||||    
T  145270 gagttctacttctgaagagatgatcagaactaattgcaacggataaaaacagagagagtgagagaagaaagacacaa 145194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Original strand, 83650 - 83707
Alignment:
Q  643 gagttctacttctgaggtgatgttcaggactaaatgcagcggataaaacagagagaga 700  Q
    |||||| |||||||| || ||||| || |||| |||||| ||||||||||||||||||    
T  83650 gagttccacttctgaagttatgtttagaactagatgcagtggataaaacagagagaga 83707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University