View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5784-Insertion-10 (Length: 248)
Name: NF5784-Insertion-10
Description: NF5784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5784-Insertion-10 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 9237194 - 9237433
Alignment:
| Q |
9 |
cttttgctaaaaataatgacattcatgcctttagacaatttttgttttcaaacgtttacaaaatcggctcgtttgacaaatgggaacgcaactatcaagt |
108 |
Q |
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| T |
9237194 |
cttttgctaaaaataatgacattcatgcctttagacaatttttgttttcaaacgtttacaaaatcggctcgtttgacaaatgggaacgcaactatcaagt |
9237293 |
T |
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| Q |
109 |
tggtaaaaccatgtagaaaatcgtggtatatcacaaactcagactatacgactagtcgactatcatcactcaaccatcacaataacgactctaattgcca |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |
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| T |
9237294 |
tggtaaaaccatgtagaaaatcgtggtatatcacaaactcagactatacgactagtcgactatcatcactgaaccataacaataacgactctaattgcca |
9237393 |
T |
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| Q |
209 |
ccaacaagcatacgaaatagacaaatggtaaatatgatgt |
248 |
Q |
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| T |
9237394 |
ccaacaagcatacgaaatagacaaatggtaaatatgatgt |
9237433 |
T |
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