View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5784-Insertion-4 (Length: 918)

Name: NF5784-Insertion-4
Description: NF5784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5784-Insertion-4
NF5784-Insertion-4
[»] chr3 (51 HSPs)
chr3 (90-528)||(52442415-52442847)
chr3 (676-819)||(52442277-52442416)
chr3 (527-681)||(39616910-39617064)
chr3 (526-679)||(53703727-53703881)
chr3 (527-678)||(45113733-45113884)
chr3 (525-678)||(31376172-31376325)
chr3 (525-677)||(27302076-27302228)
chr3 (533-677)||(48643609-48643753)
chr3 (571-678)||(44118226-44118333)
chr3 (524-667)||(53284325-53284468)
chr3 (526-677)||(48346448-48346599)
chr3 (581-663)||(13356787-13356869)
chr3 (584-678)||(19227364-19227458)
chr3 (571-665)||(45746482-45746576)
chr3 (527-665)||(43901592-43901730)
chr3 (525-677)||(16123756-16123907)
chr3 (541-680)||(50100207-50100347)
chr3 (529-643)||(2544491-2544606)
chr3 (547-670)||(21944295-21944418)
chr3 (598-679)||(34269308-34269389)
chr3 (569-665)||(36191485-36191584)
chr3 (526-680)||(42896140-42896294)
chr3 (586-670)||(46220372-46220456)
chr3 (8-56)||(52442881-52442929)
chr3 (533-662)||(19899626-19899756)
chr3 (571-630)||(51980434-51980493)
chr3 (574-667)||(6061093-6061184)
chr3 (525-614)||(25313275-25313364)
chr3 (611-671)||(50660021-50660081)
chr3 (574-633)||(8764275-8764334)
chr3 (570-621)||(8769189-8769240)
chr3 (580-663)||(27363213-27363296)
chr3 (614-677)||(53441993-53442056)
chr3 (623-677)||(2544436-2544490)
chr3 (614-680)||(21662882-21662948)
chr3 (583-677)||(24489368-24489461)
chr3 (873-918)||(52442177-52442223)
chr3 (613-680)||(28406463-28406530)
chr3 (636-679)||(31376172-31376215)
chr3 (637-679)||(53284425-53284467)
chr3 (525-678)||(53703727-53703881)
chr3 (627-672)||(2544558-2544603)
chr3 (571-659)||(51723395-51723483)
chr3 (525-677)||(39616910-39617062)
chr3 (571-659)||(44518053-44518141)
chr3 (526-561)||(19227423-19227458)
chr3 (636-671)||(48643609-48643644)
chr3 (527-561)||(2544436-2544470)
chr3 (623-677)||(25113348-25113402)
chr3 (527-594)||(50659948-50660015)
chr3 (611-680)||(379156-379225)
[»] chr8 (46 HSPs)
chr8 (525-680)||(43932046-43932201)
chr8 (526-682)||(34604775-34604931)
chr8 (525-678)||(13831872-13832025)
chr8 (526-681)||(43409832-43409987)
chr8 (526-678)||(43292566-43292718)
chr8 (527-666)||(29690446-29690585)
chr8 (571-679)||(34745254-34745362)
chr8 (526-678)||(35583881-35584033)
chr8 (525-664)||(9550106-9550245)
chr8 (526-677)||(45372704-45372855)
chr8 (570-659)||(38298543-38298632)
chr8 (574-677)||(5356792-5356895)
chr8 (527-678)||(7548496-7548648)
chr8 (586-668)||(9633089-9633171)
chr8 (541-671)||(24599674-24599804)
chr8 (574-683)||(44579939-44580048)
chr8 (525-629)||(9420584-9420688)
chr8 (536-662)||(38494253-38494379)
chr8 (578-678)||(35794576-35794676)
chr8 (525-627)||(40645707-40645809)
chr8 (570-678)||(27108031-27108139)
chr8 (525-680)||(43932045-43932200)
chr8 (571-680)||(7693076-7693185)
chr8 (571-682)||(10839757-10839868)
chr8 (636-682)||(40645704-40645750)
chr8 (527-604)||(45180111-45180188)
chr8 (571-682)||(1223117-1223228)
chr8 (571-646)||(3236360-3236435)
chr8 (571-677)||(5031463-5031569)
chr8 (611-681)||(9420582-9420652)
chr8 (527-630)||(41624737-41624840)
chr8 (525-678)||(34745254-34745407)
chr8 (623-680)||(43135139-43135196)
chr8 (526-667)||(43292566-43292707)
chr8 (525-678)||(43409832-43409985)
chr8 (627-679)||(16448786-16448838)
chr8 (614-678)||(24177970-24178034)
chr8 (637-677)||(29690545-29690585)
chr8 (614-681)||(35011207-35011274)
chr8 (623-677)||(30923920-30923974)
chr8 (613-682)||(24822808-24822877)
chr8 (570-643)||(27988117-27988190)
chr8 (570-643)||(28045419-28045492)
chr8 (637-678)||(34604890-34604931)
chr8 (637-678)||(35583992-35584033)
chr8 (637-678)||(45372814-45372855)
[»] chr7 (53 HSPs)
chr7 (526-682)||(41487785-41487941)
chr7 (525-677)||(47612289-47612441)
chr7 (532-677)||(41088851-41088996)
chr7 (527-667)||(29559436-29559576)
chr7 (526-683)||(22618156-22618313)
chr7 (571-679)||(41395705-41395813)
chr7 (530-677)||(10674122-10674269)
chr7 (525-672)||(24164520-24164667)
chr7 (574-679)||(28248428-28248533)
chr7 (571-672)||(45123249-45123350)
chr7 (526-671)||(45025599-45025744)
chr7 (526-682)||(33901032-33901188)
chr7 (526-677)||(27320293-27320444)
chr7 (584-672)||(13860273-13860361)
chr7 (525-677)||(18064721-18064873)
chr7 (534-678)||(47484027-47484171)
chr7 (527-662)||(40234765-40234900)
chr7 (580-681)||(12806903-12807004)
chr7 (534-667)||(3633197-3633330)
chr7 (569-646)||(7999489-7999566)
chr7 (542-683)||(37006470-37006612)
chr7 (580-677)||(40198603-40198700)
chr7 (533-646)||(7456424-7456537)
chr7 (541-678)||(14543266-14543403)
chr7 (525-646)||(39413858-39413979)
chr7 (537-665)||(31902959-31903087)
chr7 (574-658)||(29835130-29835214)
chr7 (611-677)||(10007659-10007725)
chr7 (628-678)||(33901138-33901188)
chr7 (570-648)||(47280215-47280293)
chr7 (592-679)||(48948939-48949028)
chr7 (613-678)||(24932381-24932446)
chr7 (527-680)||(47612289-47612442)
chr7 (614-678)||(2523856-2523920)
chr7 (526-678)||(45025592-45025744)
chr7 (525-677)||(36245373-36245525)
chr7 (627-682)||(40234760-40234815)
chr7 (598-673)||(40599925-40600000)
chr7 (611-677)||(11668098-11668164)
chr7 (541-665)||(33039573-33039699)
chr7 (627-671)||(7456424-7456468)
chr7 (628-672)||(10674223-10674267)
chr7 (627-671)||(22618262-22618306)
chr7 (636-680)||(24164624-24164668)
chr7 (636-672)||(41088960-41088996)
chr7 (571-658)||(34117982-34118069)
chr7 (636-670)||(3633197-3633231)
chr7 (613-683)||(4826846-4826916)
chr7 (613-678)||(4132468-4132533)
chr7 (636-677)||(29559436-29559477)
chr7 (627-680)||(36245372-36245425)
chr7 (637-678)||(41487900-41487941)
chr7 (627-676)||(47484021-47484070)
[»] scaffold0767 (2 HSPs)
scaffold0767 (541-678)||(3807-3944)
scaffold0767 (526-561)||(3807-3842)
[»] chr6 (21 HSPs)
chr6 (525-678)||(2913331-2913484)
chr6 (527-682)||(30438737-30438892)
chr6 (527-659)||(23916145-23916276)
chr6 (570-680)||(359587-359697)
chr6 (526-679)||(28605568-28605721)
chr6 (569-671)||(12217532-12217635)
chr6 (569-671)||(29284539-29284641)
chr6 (570-670)||(8264978-8265078)
chr6 (527-662)||(9343134-9343269)
chr6 (525-672)||(12605607-12605754)
chr6 (584-657)||(33127842-33127915)
chr6 (525-677)||(10145212-10145364)
chr6 (627-677)||(23916226-23916276)
chr6 (611-680)||(2913416-2913485)
chr6 (614-677)||(17598110-17598173)
chr6 (611-678)||(2230432-2230499)
chr6 (571-677)||(33119947-33120051)
chr6 (570-641)||(33128860-33128931)
chr6 (628-682)||(12605604-12605658)
chr6 (575-641)||(26484331-26484397)
chr6 (569-665)||(12240113-12240207)
[»] chr5 (38 HSPs)
chr5 (530-678)||(20502085-20502233)
chr5 (527-677)||(13932460-13932610)
chr5 (525-678)||(29451891-29452043)
chr5 (525-672)||(29874314-29874461)
chr5 (527-677)||(38978741-38978891)
chr5 (526-678)||(73782-73934)
chr5 (580-679)||(19211277-19211376)
chr5 (526-679)||(33247290-33247442)
chr5 (526-681)||(7537016-7537171)
chr5 (532-681)||(13278881-13279030)
chr5 (526-667)||(24173418-24173559)
chr5 (575-679)||(35318561-35318665)
chr5 (520-666)||(29002734-29002880)
chr5 (525-677)||(32455138-32455288)
chr5 (525-677)||(5355550-5355702)
chr5 (527-677)||(27600758-27600907)
chr5 (542-678)||(35204922-35205057)
chr5 (542-678)||(35212102-35212237)
chr5 (575-658)||(13128211-13128294)
chr5 (541-672)||(9630248-9630379)
chr5 (574-672)||(33970703-33970801)
chr5 (637-680)||(5355660-5355703)
chr5 (627-673)||(13278985-13279031)
chr5 (627-678)||(73782-73833)
chr5 (627-677)||(8680640-8680690)
chr5 (525-678)||(13789729-13789882)
chr5 (525-561)||(7537018-7537054)
chr5 (608-679)||(29374250-29374321)
chr5 (614-677)||(38394427-38394490)
chr5 (617-659)||(6604411-6604453)
chr5 (527-590)||(8680627-8680690)
chr5 (611-677)||(15968310-15968376)
chr5 (627-677)||(30132887-30132937)
chr5 (623-680)||(1643439-1643496)
chr5 (586-678)||(3814029-3814121)
chr5 (637-682)||(29452001-29452046)
chr5 (637-682)||(29874311-29874356)
chr5 (518-559)||(30132832-30132873)
[»] chr4 (68 HSPs)
chr4 (527-678)||(25756711-25756862)
chr4 (527-681)||(37895254-37895408)
chr4 (530-678)||(54864062-54864210)
chr4 (525-683)||(29686397-29686555)
chr4 (525-678)||(43141763-43141916)
chr4 (527-681)||(36196364-36196518)
chr4 (541-671)||(54673315-54673445)
chr4 (528-672)||(56491072-56491216)
chr4 (526-677)||(33615778-33615929)
chr4 (525-680)||(33622877-33623032)
chr4 (527-678)||(32193474-32193625)
chr4 (527-678)||(35877312-35877463)
chr4 (527-672)||(4418101-4418246)
chr4 (570-669)||(52966437-52966536)
chr4 (527-666)||(52136698-52136837)
chr4 (532-678)||(27587250-27587396)
chr4 (569-677)||(8347533-8347641)
chr4 (569-679)||(9813497-9813607)
chr4 (584-682)||(24100753-24100851)
chr4 (542-673)||(50511259-50511390)
chr4 (569-662)||(31853081-31853174)
chr4 (525-680)||(35929006-35929160)
chr4 (527-671)||(25874704-25874849)
chr4 (525-672)||(43556688-43556836)
chr4 (526-679)||(22019932-22020084)
chr4 (571-670)||(1140871-1140970)
chr4 (574-673)||(23558952-23559051)
chr4 (580-671)||(42159978-42160069)
chr4 (525-666)||(28460756-28460897)
chr4 (525-668)||(1205091-1205233)
chr4 (527-618)||(7086189-7086280)
chr4 (593-662)||(22210803-22210872)
chr4 (571-627)||(40592755-40592811)
chr4 (572-670)||(50511471-50511569)
chr4 (525-671)||(19350609-19350753)
chr4 (526-604)||(38208321-38208399)
chr4 (526-680)||(29686396-29686550)
chr4 (613-678)||(53225729-53225794)
chr4 (531-599)||(1100899-1100967)
chr4 (636-679)||(27587243-27587286)
chr4 (571-682)||(48361046-48361157)
chr4 (611-665)||(24100887-24100941)
chr4 (627-665)||(50225316-50225354)
chr4 (571-662)||(52278008-52278101)
chr4 (627-672)||(1100900-1100945)
chr4 (636-677)||(42160081-42160122)
chr4 (637-677)||(32193474-32193514)
chr4 (571-659)||(36132678-36132766)
chr4 (637-677)||(37895254-37895294)
chr4 (637-681)||(48195999-48196043)
chr4 (606-681)||(4758772-4758847)
chr4 (627-670)||(7086230-7086273)
chr4 (526-561)||(25756827-25756862)
chr4 (627-678)||(33615878-33615929)
chr4 (637-680)||(43556687-43556730)
chr4 (637-672)||(50511392-50511427)
chr4 (611-682)||(56491066-56491137)
chr4 (623-677)||(16412233-16412287)
chr4 (636-682)||(17316588-17316634)
chr4 (637-679)||(33622877-33622919)
chr4 (579-641)||(36491056-36491118)
chr4 (571-677)||(42670763-42670869)
chr4 (611-677)||(44111828-44111894)
chr4 (623-680)||(20688511-20688568)
chr4 (636-677)||(25756711-25756752)
chr4 (611-676)||(41116562-41116627)
chr4 (574-659)||(43117900-43117985)
chr4 (614-679)||(47866033-47866098)
[»] chr2 (31 HSPs)
chr2 (525-678)||(25795235-25795388)
chr2 (541-682)||(15239705-15239846)
chr2 (525-679)||(28143740-28143896)
chr2 (569-678)||(41464712-41464821)
chr2 (527-677)||(27311576-27311726)
chr2 (532-678)||(40534517-40534663)
chr2 (527-680)||(36103392-36103545)
chr2 (527-667)||(6971579-6971719)
chr2 (533-679)||(45076339-45076485)
chr2 (569-665)||(3365316-3365412)
chr2 (574-662)||(11687521-11687609)
chr2 (569-682)||(23464537-23464651)
chr2 (580-662)||(9373446-9373528)
chr2 (525-662)||(27306725-27306860)
chr2 (570-679)||(38448980-38449089)
chr2 (596-669)||(6971503-6971576)
chr2 (574-662)||(11724279-11724372)
chr2 (571-678)||(12873721-12873828)
chr2 (586-678)||(30761376-30761468)
chr2 (601-665)||(44283605-44283670)
chr2 (636-679)||(25795235-25795278)
chr2 (571-678)||(41153154-41153261)
chr2 (606-664)||(4755474-4755532)
chr2 (627-677)||(6971669-6971719)
chr2 (569-665)||(31853180-31853275)
chr2 (571-659)||(12962722-12962810)
chr2 (579-678)||(9152430-9152529)
chr2 (611-678)||(10495723-10495790)
chr2 (613-659)||(28249018-28249064)
chr2 (613-678)||(12486077-12486142)
chr2 (614-679)||(45034395-45034460)
[»] scaffold0023 (2 HSPs)
scaffold0023 (525-678)||(112820-112973)
scaffold0023 (627-680)||(112819-112872)
[»] chr1 (37 HSPs)
chr1 (530-680)||(15699460-15699610)
chr1 (534-679)||(19998408-19998553)
chr1 (525-678)||(51590428-51590581)
chr1 (527-672)||(22182764-22182909)
chr1 (525-683)||(52279231-52279389)
chr1 (532-662)||(45977098-45977228)
chr1 (541-682)||(31050244-31050385)
chr1 (524-679)||(18038685-18038840)
chr1 (526-682)||(13320301-13320457)
chr1 (525-672)||(13321718-13321865)
chr1 (526-665)||(27687839-27687978)
chr1 (569-663)||(44224283-44224376)
chr1 (526-677)||(48565526-48565677)
chr1 (526-644)||(13770741-13770859)
chr1 (526-667)||(34174884-34175025)
chr1 (525-680)||(26924209-26924364)
chr1 (526-681)||(51590428-51590583)
chr1 (571-679)||(50155341-50155449)
chr1 (593-665)||(2543322-2543394)
chr1 (570-646)||(29438168-29438244)
chr1 (584-643)||(12175507-12175566)
chr1 (615-677)||(29256685-29256747)
chr1 (580-679)||(43851001-43851102)
chr1 (627-679)||(18038787-18038839)
chr1 (627-678)||(19998510-19998561)
chr1 (611-678)||(25238656-25238723)
chr1 (571-670)||(49944839-49944938)
chr1 (628-682)||(13321814-13321868)
chr1 (611-677)||(38040359-38040425)
chr1 (623-680)||(26924308-26924365)
chr1 (637-680)||(37179019-37179062)
chr1 (627-678)||(48565626-48565677)
chr1 (627-677)||(22182764-22182814)
chr1 (571-680)||(26760216-26760325)
chr1 (636-678)||(43850947-43850989)
chr1 (637-678)||(13770818-13770859)
chr1 (612-681)||(25021315-25021384)
[»] scaffold0059 (1 HSPs)
scaffold0059 (526-678)||(26584-26736)
[»] scaffold0200 (1 HSPs)
scaffold0200 (532-678)||(25618-25765)
[»] scaffold0110 (1 HSPs)
scaffold0110 (569-680)||(40232-40343)
[»] scaffold0533 (1 HSPs)
scaffold0533 (541-669)||(3253-3381)
[»] scaffold0287 (2 HSPs)
scaffold0287 (534-667)||(12755-12888)
scaffold0287 (636-670)||(12854-12888)
[»] scaffold0015 (1 HSPs)
scaffold0015 (578-677)||(17384-17483)
[»] scaffold0027 (1 HSPs)
scaffold0027 (571-663)||(5457-5549)
[»] scaffold0176 (1 HSPs)
scaffold0176 (580-665)||(19308-19390)
[»] scaffold0474 (1 HSPs)
scaffold0474 (584-659)||(11767-11842)
[»] scaffold0460 (1 HSPs)
scaffold0460 (569-666)||(12223-12320)


Alignment Details
Target: chr3 (Bit Score: 353; Significance: 0; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 90 - 528
Target Start/End: Complemental strand, 52442847 - 52442415
Alignment:
Q  90 gataccgtctctcccatgtttatttatgcaactctacctgaacataatgcgnnnnnnnnnnaaatataaaattggttgtccaagatattcggctgaaaaa 189  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  52442847 gataccgtctctcccgtgtttatttatgcaactctacctgaacataatgcgttttctttttaaatataaaattggttgtccaagatattcggctgaaaaa 52442748  T
Q  190 ttaaagactaatcatttggagtttagatcctatctatttcttaaaataaaggacaacatccaattattgccgttttatacatatatgagtttgaacacat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52442747 ttaaagactaatcatttggagtttagatcctatctatttcttaaaataaaggacaacatccaattattgccgttttatacatatatgagtttgaacacat 52442648  T
Q  290 tattaccaattcacaaaattacaatatatacttaaatcatacatttttgttttgtttatgtttcatattggaattgaaaatctagatccttgcattagtg 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52442647 tattaccaattcacaaaattacaatatatacttaaatcatacatttttgttttgtttatgtttcatattggaattgaacatctagatccttgcattagtg 52442548  T
Q  390 ttacaacactttcacacttcacccatctcacactctaacatacatactccattcactctaatttatatgttattttaggaatatatcttttgcctaattt 489  Q
    ||||||||||||  ||||||||||||| |||||||||    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  52442547 ttacaacacttt--cacttcacccatcacacactcta----acatactccatccactctaatttacatgttattttaggaatatatcttttgcctaattt 52442454  T
Q  490 ttagtgtaattatgtaatatgaatactgataaggcaata 528  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  52442453 ttagtgtaattatgtaatacgaatactgataaggtaata 52442415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 676 - 819
Target Start/End: Complemental strand, 52442416 - 52442277
Alignment:
Q  676 tattattactttttatagaacttacacattaacatcaccataactatttgcgnnnnnnnnnnnnngtacaaattactattgttctttctaaatgttgtgt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||||    
T  52442416 tattattactttttatagaacttacacattaacatcaccataactatt----gtgttttttttttgtacaaattactattgttctttctaaatgttgtgt 52442321  T
Q  776 ccacttacaagtggtacagaaatattttattactttatacgcct 819  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  52442320 ccacttacaagtggtacaaaaatattttattactttatacgcct 52442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 527 - 681
Target Start/End: Original strand, 39616910 - 39617064
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||||| ||||       |||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  39616910 tactccctccggtccttattataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattatt 39617009  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    | |||||   |||||||||| |||||||| |||||||||||||||| ||||||||    
T  39617010 ctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtattat 39617064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 526 - 679
Target Start/End: Complemental strand, 53703881 - 53703727
Alignment:
Q  526 atactccctccggttcttattataagaaacaa-ttgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||||||||| |||||||||||||| || ||||       |||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  53703881 atactccctccggtccttattataagaaaaaagttgaccttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaatta 53703782  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||| |||||   |||||||||| ||||||||||||||||||||||||| ||||||    
T  53703781 ttctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtatt 53703727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 527 - 678
Target Start/End: Original strand, 45113733 - 45113884
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||| | | |||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||    
T  45113733 tactccctctgatccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattatt 45113832  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    | |||||  ||||||||||||| ||||||||||||||||||||||| |||||    
T  45113833 ctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 45113884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 31376172 - 31376325
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||||| ||||       |||||||| | |||||||||||||||||||||||||||||  ||||||||||| ||    
T  31376172 aatactccctccggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaagatacattaatta 31376271  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||| |||||   |||||||||| |||||||| |||||||||||||||| |||||    
T  31376272 ttctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtat 31376325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 525 - 677
Target Start/End: Original strand, 27302076 - 27302228
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||| |||||||  ||||||||||||| |||| |       ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||    
T  27302076 aatactctctccggtctttattataagaaagaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaattagatacattaatta 27302175  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||| |||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  27302176 ttctatgaacctaaaaagtcaactttttcttataataaagaccggaggaagta 27302228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 533 - 677
Target Start/End: Original strand, 48643609 - 48643753
Alignment:
Q  533 ctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatga 632  Q
    ||||||| |||||||||||||||||||||       |||| || || ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  48643609 ctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatga 48643708  T
Q  633 atgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    || ||||||||||| |||||||| |||||||||| ||||| ||||    
T  48643709 atctaaaaagtcaattgtttcttgtaataaggactggagggagta 48643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 571 - 678
Target Start/End: Original strand, 44118226 - 44118333
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||| ||| |||||||||||||||||||||||||| | ||||||||| |||  ||||||| ||||||||||| |||||||||||||||||||| ||    
T  44118226 ttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaattatataatgaatctaaaaagtcaattgtttcttataataaggaccaga 44118325  T
Q  671 ggaagtat 678  Q
    ||||||||    
T  44118326 ggaagtat 44118333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 524 - 667
Target Start/End: Complemental strand, 53284468 - 53284325
Alignment:
Q  524 caatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaat 623  Q
    ||||||| |||||||| |||||||||||||||||||||       |||| |||||||||||||||||||||||||| ||||| ||  ||||||||||| |    
T  53284468 caatacttcctccggtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatctagtctacatttacaataagatacattaatt 53284369  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    |||  |||||  |||||| |||||| ||||||||||||||||||    
T  53284368 attttatgaaactaaaaaatcaactttttcttataataaggacc 53284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 526 - 677
Target Start/End: Original strand, 48346448 - 48346599
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||||||| ||||||||||||| ||||  ||||        ||| ||| | |||||||||||||||||||||||||||||| ||||||||||| ||     
T  48346448 atactccctcccgttcttattataaaaaacttttgactttttaagtttattatgtaagtgatgtatctagtctatatttataacaagatacattaattac 48346547  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    | ||||||| |||||||| ||  ||||||||||||||||| |||||| ||||    
T  48346548 ttaatgaatctaaaaagtaaaaagtttcttataataaggatcggagggagta 48346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 581 - 663
Target Start/End: Original strand, 13356787 - 13356869
Alignment:
Q  581 aagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataag 663  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||  |||||||||||||||    
T  13356787 aagtgatgtatctagtctatatttataccgagatacattacttatttaatgaatttaaaaagtcaatagtttcttataataag 13356869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 584 - 678
Target Start/End: Original strand, 19227364 - 19227458
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||| |||||   ||||| |||| ||||||||||||||||||||||||| |||||    
T  19227364 tgatgtatctagtctatatttataacaagataaattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 19227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 45746576 - 45746482
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||||| |||| ||||||||||| ||||||    
T  45746576 ttcaatgtgtaagtgatggatctagtctatatttataacgagatatattaattattcaataaatctaaaaaatcaattgtttcttatactaagga 45746482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 527 - 665
Target Start/End: Complemental strand, 43901730 - 43901592
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||| |||||||| ||||||||||||||||||| |       |||||||||| ||| ||||||| |||||||||||||  ||  ||||||||||| ||||    
T  43901730 tactacctccggtccttattataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacattaattatt 43901631  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    | |||||  ||||||||||||| |||| |||||||||||    
T  43901630 ctatgaacctaaaaagtcaactttttcatataataagga 43901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 16123907 - 16123756
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||| | |||| |||||||||| |||||||| |       |||||||||||||||| |||||||||||||||||||| ||  ||||| ||||| ||    
T  16123907 aatactccgttcggtccttattataaaaaacaattaacttttttggttcattgtataagtaatgtatctagtctatatttacaataagatatattaatta 16123808  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||  || ||  | ||||||||| | ||||||||||||||||||||||||||||    
T  16123807 ttttataaacct-aaaagtcaattttttcttataataaggaccggaggaagta 16123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 680
Target Start/End: Original strand, 50100207 - 50100347
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||  |||||| |||| | ||| ||||||  || |    
T  50100207 cttattataagaaacaattgacttttttagttcattgtataagtgatgtatctagtctatatttataataagatacgttaatttttctatgaatcaaaca 50100306  T
Q  641 agtcaact-gtttcttataataaggaccggaggaagtatta 680  Q
    ||| || |  ||| ||||||||||||||||||| |||||||    
T  50100307 agttaattatttttttataataaggaccggagggagtatta 50100347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 643
Target Start/End: Complemental strand, 2544606 - 2544491
Alignment:
Q  529 ctccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctata-tttataacgagatacattaaatattc 627  Q
    ||||||||||| ||||||| |||||||||||||       | ||||||||||||||||||||| | ||||||| |||||||| |||||||| || |||||    
T  2544606 ctccctccggtccttattacaagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattc 2544507  T
Q  628 aatgaatgtaaaaagt 643  Q
    ||||||  ||||||||    
T  2544506 aatgaacctaaaaagt 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 547 - 670
Target Start/End: Complemental strand, 21944418 - 21944295
Alignment:
Q  547 ataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaa 646  Q
    |||||||||||||||       ||||| |||| |||||| |||||||||||||||| || |   ||||||||||| ||||| |||||  |||||||||||    
T  21944418 ataagaaacaattgatttttttggttccttgtgtaagtggtgtatctagtctatatctacactaagatacattaattattctatgaacctaaaaagtcaa 21944319  T
Q  647 ctgtttcttataataaggaccgga 670  Q
     | |||||||||||||||||||||    
T  21944318 ttttttcttataataaggaccgga 21944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 598 - 679
Target Start/End: Original strand, 34269308 - 34269389
Alignment:
Q  598 tatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||||| ||||| |||||||||||||  ||| |||||||    
T  34269308 tatatttataacgaaatatattaattattcaatgaatctaaaaagtcaaatgttttttataataaggactagagaaagtatt 34269389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 569 - 665
Target Start/End: Complemental strand, 36191584 - 36191485
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaa---tattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||| | ||||||||||||||||||||||| |||||| |||||||||||    ||||| |||||   |||||||||| ||||||||||||||||||    
T  36191584 ggttcattatgtaagtgatgtatctagtctatatatataacaagatacattaatcattattctatgaaccaaaaaagtcaattgtttcttataataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 526 - 680
Target Start/End: Original strand, 42896140 - 42896294
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||||||||||  |||||||||||| ||||| |       ||||||||| |||| |||||||||| ||||||| | |  || | |||||| |  |||    
T  42896140 atactccctccggtctttattataagaagcaattcactttttaggttcattgaataactgatgtatctggtctataataaggaccatatacatcagttat 42896239  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||| ||||||||| || |||||||||||||||||||| || | |||||||    
T  42896240 tcaatgaacgtaaaaagtgaattgtttcttataataaggaccagaaggagtatta 42896294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 586 - 670
Target Start/End: Complemental strand, 46220456 - 46220372
Alignment:
Q  586 atgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||||||| |||||||| ||  ||||||||||| ||||| |||||| |||||| |||| | |||||||||||||||||||||    
T  46220456 atgtatctagtatatatttacaataagatacattaattattctatgaatataaaaaatcaattttttcttataataaggaccgga 46220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 52442929 - 52442881
Alignment:
Q  8 attatcttatctccttaaacttagagatcttccaccgtcgtgttacgcg 56  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52442929 attatcttatctccttaaacttagagatcttccaccgtcttgttacgcg 52442881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 533 - 662
Target Start/End: Complemental strand, 19899756 - 19899626
Alignment:
Q  533 ctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtct--atatttataacgagatacattaaatattcaat 630  Q
    ||||||| |||||||||| ||||||||||       |||||||||| ||| |||||||||||||||  |||| |||||| |||| | |||| ||||||||    
T  19899756 ctccggtccttattataaaaaacaattgactctataggttcattgtgtaaatgatgtatctagtctatatatatataacaagatgcgttaattattcaat 19899657  T
Q  631 gaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||  |||||| |||| |||||||||||||||    
T  19899656 gaacctaaaaa-tcaattgtttcttataataa 19899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 571 - 630
Target Start/End: Complemental strand, 51980493 - 51980434
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaat 630  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  51980493 ttcattgtgtaagtgatatatctagtttatatttataacgagatacattaattattcaat 51980434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 574 - 667
Target Start/End: Complemental strand, 6061184 - 6061093
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    ||||| ||||||||||||||||| |||||||||||||| || |||||| ||||| |||||| ||||||||  | ||||||| ||||||| ||||    
T  6061184 attgtgtaagtgatgtatctagtatatatttataacgaaatgcattaattattctatgaatctaaaaagt--attgtttctaataataaagacc 6061093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 525 - 614
Target Start/End: Original strand, 25313275 - 25313364
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagat 614  Q
    ||||||| || |||| |||||||||| ||| ||||||       |||||||||| |||||||||||| ||||||||||||||||||||||    
T  25313275 aatactctcttcggtccttattataaaaaataattgattttttaggttcattgtgtaagtgatgtatttagtctatatttataacgagat 25313364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 611 - 671
Target Start/End: Original strand, 50660021 - 50660081
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    ||||||||||| ||||| || ||| ||||||||||||| ||||||||||||||||||||||    
T  50660021 agatacattaattattctataaatctaaaaagtcaactttttcttataataaggaccggag 50660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 574 - 633
Target Start/End: Complemental strand, 8764334 - 8764275
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa 633  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||    
T  8764334 attgtgtaagtgatgtatctaatctatatttataacaagatacattaattattctatgaa 8764275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 570 - 621
Target Start/End: Complemental strand, 8769240 - 8769189
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaa 621  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  8769240 gttcattgtgtaagtgatgtatctaatctatatttataacaagatacattaa 8769189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 580 - 663
Target Start/End: Original strand, 27363213 - 27363296
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataag 663  Q
    ||||||||||||||| |||||||||||||| |||||| |||| || | ||||||| ||||||||  |  |||||||||||||||    
T  27363213 taagtgatgtatctaatctatatttataacaagatacgttaattacttaatgaatctaaaaagtagaaagtttcttataataag 27363296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 614 - 677
Target Start/End: Original strand, 53441993 - 53442056
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||  ||||||||||| ||||    
T  53441993 tacattaattattcaatgaatttaaaaagtcaactttttcttataaataggaccggagggagta 53442056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 2544490 - 2544436
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||    
T  2544490 tattcaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 2544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 614 - 680
Target Start/End: Complemental strand, 21662948 - 21662882
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||| || ||||||||| ||||||||||||| ||||||||||  ||||||||||| |||||||    
T  21662948 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatta 21662882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 677
Target Start/End: Original strand, 24489368 - 24489461
Alignment:
Q  583 gtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||||||| ||||||||  |  ||||||||||| ||||| |||||| |||||| |||||| | |||||||||||||| |||||| ||||    
T  24489368 gtgatgtatctagtttatatttactataagatacattaattattctatgaatttaaaaa-tcaactttgtcttataataaggatcggagggagta 24489461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 873 - 918
Target Start/End: Complemental strand, 52442223 - 52442177
Alignment:
Q  873 catactatttactagcacaataaa-catatgtaaatgaaagaataat 918  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  52442223 catactatttactagcacaataaaacatatgtaaatgaaagaataat 52442177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 613 - 680
Target Start/End: Complemental strand, 28406530 - 28406463
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||| ||||||| |||| ||||||||||| |||||||| |||  ||||||||||| |||||||    
T  28406530 atacattaattattcaacgaatctaaaaagtcaattgtttcttgtaaataggaccggagggagtatta 28406463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 636 - 679
Target Start/End: Complemental strand, 31376215 - 31376172
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  31376215 taaaaagtcaaatgtttcttataataaggaccggagggagtatt 31376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 679
Target Start/End: Original strand, 53284425 - 53284467
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  53284425 aaaaaatcaattgtttcttataataaggaccggaggaagtatt 53284467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 53703727 - 53703881
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaat 623  Q
    ||||||||||||||| |||||||||||||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  |    
T  53703727 aatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactt 53703825  T
Q  624 attcaatgaatgtaaaaagtcaac-tgtttcttataataaggaccggaggaagtat 678  Q
    |  |||||||  ||||| |||||| | ||||||||||||||||||||||| |||||    
T  53703826 acacaatgaacctaaaaggtcaacttttttcttataataaggaccggagggagtat 53703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 672
Target Start/End: Original strand, 2544558 - 2544603
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||    
T  2544558 caatgaatctaaaaagtcaattgtttcttgtaataaggaccggagg 2544603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 51723483 - 51723395
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    |||||||||||| |||| ||| ||||||||||| |||| | | ||||||||| || ||||||||| |||||| |||||| ||||||||||    
T  51723483 ttcattgtataaatgatatatttagtctatattctatatc-aaatacattaattactcaatgaatctaaaaaatcaactttttcttataa 51723395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 39617062 - 39616910
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaat 623  Q
    ||||||||||||||| ||||||| |||||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  |    
T  39617062 aatactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactt 39616964  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |   ||||||  | ||||||||| ||||||||||||||||||||||||| ||||    
T  39616963 acataatgaaccttaaaagtcaaatgtttcttataataaggaccggagggagta 39616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 44518141 - 44518053
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    |||||||| ||| |||||||| | ||||||||||   || ||||||||||| || ||||||||| |||||||||||   ||||||||||    
T  44518141 ttcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttataa 44518053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 561
Target Start/End: Complemental strand, 19227458 - 19227423
Alignment:
Q  526 atactccctccggttcttattataagaaacaattga 561  Q
    |||||||||||||| |||||||||||||||||||||    
T  19227458 atactccctccggtccttattataagaaacaattga 19227423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 671
Target Start/End: Complemental strand, 48643644 - 48643609
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggag 671  Q
    ||||||||||| ||||||||||||||||||||||||    
T  48643644 taaaaagtcaattgtttcttataataaggaccggag 48643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 561
Target Start/End: Original strand, 2544436 - 2544470
Alignment:
Q  527 tactccctccggttcttattataagaaacaattga 561  Q
    ||||||||||||| |||||||||||||||||||||    
T  2544436 tactccctccggtccttattataagaaacaattga 2544470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 25113402 - 25113348
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||| || ||||||||||||| | ||||||||  ||||||||||||||||    
T  25113402 tattcaatgtatctaaaaagtcaactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 50659948 - 50660015
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatcta 594  Q
    ||||||||| ||| |||||||| ||||||||||||       |||||||||| |||||||||||||||    
T  50659948 tactccctctggtccttattattagaaacaattgatttttttggttcattgtgtaagtgatgtatcta 50660015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 680
Target Start/End: Original strand, 379156 - 379225
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||| || ||||||||| || ||||||||||||| | ||||||||  ||||||||| | |||||||    
T  379156 agatacataaattattcaatgtatctaaaaagtcaactttctcttataaataggaccggaaggagtatta 379225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 680
Target Start/End: Original strand, 43932046 - 43932201
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||||||||||       ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||    
T  43932046 aatactccctccggtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaatta 43932145  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  43932146 ttcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagtatta 43932201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 526 - 682
Target Start/End: Complemental strand, 34604931 - 34604775
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||  ||||||||||  |||    
T  34604931 atactccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattatttat 34604832  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    || |||||  ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  34604831 tctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtattatt 34604775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 13831872 - 13832025
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||||| |||| ||||||||||||||||||| |       ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||| ||    
T  13831872 aatactcccttcggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacattaatta 13831971  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||| |||||  ||||||||||||| ||||||||||||||||||||||| |||||    
T  13831972 ttctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 13832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 526 - 681
Target Start/End: Original strand, 43409832 - 43409987
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| ||||||||||| | |||||||       |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  43409832 atactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattat 43409931  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    ||||||||   |||||||||  |||| || ||||||||||||||||| ||||||||    
T  43409932 tcaatgaaccgaaaaagtcatttgttgctaataataaggaccggagggagtattat 43409987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 526 - 678
Target Start/End: Complemental strand, 43292718 - 43292566
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||| || ||| |||||||||||||||| ||||       |||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||    
T  43292718 atactccatctggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattat 43292619  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    || |||||   |||||||||| ||||||||||||||||||||||||| |||||    
T  43292618 tctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtat 43292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 527 - 666
Target Start/End: Complemental strand, 29690585 - 29690446
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||| |||||||| ||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  29690585 tacttcctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacattaattatt 29690486  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggac 666  Q
    | |||||  ||||||||||  | |||||||||||||||||    
T  29690485 ctatgaacctaaaaagtcagttttttcttataataaggac 29690446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 679
Target Start/End: Complemental strand, 34745362 - 34745254
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||   |||||||||| |||||||||||||||||||||||    
T  34745362 ttcattatgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccgga 34745263  T
Q  671 ggaagtatt 679  Q
    || ||||||    
T  34745262 gggagtatt 34745254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 526 - 678
Target Start/End: Complemental strand, 35584033 - 35583881
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| ||||||||||||||||||| |       |||||||||||||||||||||||||| |||||||||| ||  ||||||||||| |||    
T  35584033 atactccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaattat 35583934  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    || |||||  ||||| ||||  | ||||||||||||||||| ||||| |||||    
T  35583933 tctatgaacctaaaaggtcatatttttcttataataaggactggagggagtat 35583881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 525 - 664
Target Start/End: Original strand, 9550106 - 9550245
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||||||||||  ||||||||||||| ||||||         |||||||  ||||||||||||||||||||||||||| |||||||||||||  ||    
T  9550106 aatactccctccggtctttattataagaaataattgattttttaaattcattgggtaagtgatgtatctagtctatatttattacgagatacattagtta 9550205  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataagg 664  Q
    |||||| ||| ||||||||||| |||||||||||||||||    
T  9550206 ttcaataaatttaaaaagtcaattgtttcttataataagg 9550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 526 - 677
Target Start/End: Complemental strand, 45372855 - 45372704
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| ||||||||||| |||||||||       | |||| ||| |||||||||||||||||||||||||  ||  ||||||||||| |||    
T  45372855 atactccctccggtccttattataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacattaattat 45372756  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    || |||||  ||||||||||||| ||||||||| ||||||||||||| ||||    
T  45372755 tctatgaacctaaaaagtcaactttttcttatattaaggaccggagggagta 45372704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 570 - 659
Target Start/End: Original strand, 38298543 - 38298632
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||| |||| ||||||||||||    
T  38298543 gttcattgtgtaagtgatgtatctagcctatatttataacgagatacattaattattcaatgaacctaaaaaatcaattgtttcttataa 38298632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 574 - 677
Target Start/End: Complemental strand, 5356895 - 5356792
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    ||||||||||||||||||||| || |||||||||||||||| | |||| ||| |||||||| ||||||||||| |||| |||||||||||||||| || |    
T  5356895 attgtataagtgatgtatctaatccatatttataacgagatgcgttaattatccaatgaatctaaaaagtcaattgttgcttataataaggaccgaagaa 5356796  T
Q  674 agta 677  Q
    ||||    
T  5356795 agta 5356792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 527 - 678
Target Start/End: Original strand, 7548496 - 7548648
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| ||||||||||||||||||| |       |||||||||| |||||||||||| ||| ||||||||| ||  |||| |||||| ||||    
T  7548496 tactccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatgcattaattatt 7548595  T
Q  627 caatgaatgtaaaaag-tcaactgtttcttataataaggaccggaggaagtat 678  Q
    | |||||  ||||||  |||||| ||||||||||||||||||||||| |||||    
T  7548596 ctatgaacctaaaaaaatcaactttttcttataataaggaccggagggagtat 7548648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 586 - 668
Target Start/End: Complemental strand, 9633171 - 9633089
Alignment:
Q  586 atgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  9633171 atgtatctagtctatatttataacaagatacattaattatacaatgaatctaaaacgtcaattgtttcttataataaggaccg 9633089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 541 - 671
Target Start/End: Complemental strand, 24599804 - 24599674
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    ||||| |||||||||||||||       | |||||||||||| |||||||||||  |||||||||||| || ||||||||  |||||||||||| |||||    
T  24599804 cttataataagaaacaattgattttttagattcattgtataactgatgtatctaacctatatttataatgaaatacattatttattcaatgaatttaaaa 24599705  T
Q  641 agtcaactgtttcttataataaggaccggag 671  Q
    |||||| | ||||||||||||| ||||||||    
T  24599704 agtcaattatttcttataataaagaccggag 24599674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 574 - 683
Target Start/End: Original strand, 44579939 - 44580048
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    ||||||||||| || ||||||||||||||||| ||  ||||||||||| ||||| |||||  ||||||||||||| ||||||||||||||||| | |||     
T  44579939 attgtataagtaatatatctagtctatatttacaataagatacattaattattctatgaacttaaaaagtcaactttttcttataataaggactgaaggg 44580038  T
Q  674 agtattatta 683  Q
    ||||||||||    
T  44580039 agtattatta 44580048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 629
Target Start/End: Original strand, 9420584 - 9420688
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||||||||||| | |||||||       | |||||||||||||| |||||||| |||||||||||||||||| |||||||| ||    
T  9420584 aatactccctccggtccttattataagcagcaattgacgttttagattcattgtataagtaatgtatctggtctatatttataacgaggtacattaatta 9420683  T
Q  625 ttcaa 629  Q
    |||||    
T  9420684 ttcaa 9420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 536 - 662
Target Start/End: Complemental strand, 38494379 - 38494253
Alignment:
Q  536 cggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatg 635  Q
    ||||||||||||||||||| ||||||       |||| ||||| |||||| |||||||| | |||||||||||| ||||||||||| ||||| |||||      
T  38494379 cggttcttattataagaaaaaattgattttttaggtttattgtgtaagtggtgtatctaatttatatttataacaagatacattaattattctatgaaca 38494280  T
Q  636 taaaaagtcaactgtttcttataataa 662  Q
     |||||||||| | |||||||||||||    
T  38494279 aaaaaagtcaattatttcttataataa 38494253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 578 - 678
Target Start/End: Original strand, 35794576 - 35794676
Alignment:
Q  578 tataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||| |||||| || | ||| |||||||| ||||||||||| || ||||||||| |||||||| ||  |||||||||||||||||||||||| ||||    
T  35794576 tataagtaatgtatttaatttatgtttataacaagatacattaattactcaatgaatctaaaaagtaaaaagtttcttataataaggaccggagggagta 35794675  T
Q  678 t 678  Q
    |    
T  35794676 t 35794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 525 - 627
Target Start/End: Original strand, 40645707 - 40645809
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||| ||||| || |||||||||||||||| ||||        ||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||    
T  40645707 aatacttcctccagtccttattataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatatttataacaagatacattaatta 40645806  T
Q  625 ttc 627  Q
    |||    
T  40645807 ttc 40645809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 570 - 678
Target Start/End: Original strand, 27108031 - 27108139
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||| | ||| ||||||||||| ||| ||||||||||||||||  |||| |||||||||||| |||||| |||  | ||| |||||||||| |||||    
T  27108031 gttcattatgtaaatgatgtatctaatctgtatttataacgagatatgttaattattcaatgaatctaaaaaatcagttattttttataataagaaccgg 27108130  T
Q  670 aggaagtat 678  Q
    ||| |||||    
T  27108131 aggtagtat 27108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 680
Target Start/End: Complemental strand, 43932200 - 43932045
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaat 623  Q
    ||||||||||||||| |||||||||||||||||||||       | ||||||| |||| | |||||||| || ||||  |||| |  |||||||| |  |    
T  43932200 aatactccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgt-tataaatatagattagatacatcattt 43932102  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
     | |||||||  ||||||||||| ||||||||||||||||||||||||| |||||||    
T  43932101 gtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatta 43932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 7693076 - 7693185
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||||||| ||||||||||||   || | ||||||||| || ||||||||| ||||||||||| | ||||||||||  |||||||||    
T  7693076 ttcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccgga 7693175  T
Q  671 ggaagtatta 680  Q
     | |||||||    
T  7693176 aggagtatta 7693185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 571 - 682
Target Start/End: Complemental strand, 10839868 - 10839757
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||| |||| |||||||| | ||||||||| |||| | || |||||||| |||||||||||| ||||||||||| | ||||||||||  ||||| ||    
T  10839868 ttcattgcataaatgatgtatttggtctatattctataccaag-tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggactgg 10839770  T
Q  670 aggaagtattatt 682  Q
    |||||||| ||||    
T  10839769 aggaagtaatatt 10839757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 682
Target Start/End: Complemental strand, 40645750 - 40645704
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  40645750 taaaaagtcaaatgtttcttataataaggactggaggaagtattatt 40645704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 604
Target Start/End: Complemental strand, 45180188 - 45180111
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatattt 604  Q
    |||||||| ||||  ||||||||| ||||||||||       |||||||||| |||||||||||||||||||||||||    
T  45180188 tactcccttcggtctttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattt 45180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 571 - 682
Target Start/End: Complemental strand, 1223228 - 1223117
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| | |||||| | |||||||||| | || ||||||||||| ||  |||||||| ||||||||||  | ||||||||||  | |||||||    
T  1223228 ttcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtcacttttttcttataaatatgaccgga 1223129  T
Q  671 ggaagtattatt 682  Q
    || |||||||||    
T  1223128 gggagtattatt 1223117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 571 - 646
Target Start/End: Complemental strand, 3236435 - 3236360
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaa 646  Q
    |||||||||||| |||||||| | ||||| ||||  ||| |||||||| || |||||||||||| |||||||||||    
T  3236435 ttcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattattcaatgaatttaaaaagtcaa 3236360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 677
Target Start/End: Complemental strand, 5031569 - 5031463
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||||||| |||||||||||    || |||||||| || || | ||||||| |||||||| || | ||||||||||  |||||||||    
T  5031569 ttcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatttaaaaagttaaatttttcttataaataggaccgga 5031470  T
Q  671 ggaagta 677  Q
    |||||||    
T  5031469 ggaagta 5031463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 9420652 - 9420582
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    ||||||||||  ||| |||||||| ||||| ||||| || | |||||||||||||||||||| ||||||||    
T  9420652 agatacattacttatacaatgaatctaaaacgtcaattgctgcttataataaggaccggagggagtattat 9420582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 630
Target Start/End: Original strand, 41624737 - 41624840
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||| |  |||||||||||||||  |||       ||||| || |||||||||||||| ||||||||||||||||| | |||| |||| ||||    
T  41624737 tactccctccgatctttattataagaaacatatgactttttaggttccttatataagtgatgtatttagtctatatttataacaacatacgttaattatt 41624836  T
Q  627 caat 630  Q
    ||||    
T  41624837 caat 41624840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 34745254 - 34745407
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaat 623  Q
    ||||||||||||||| |||||||||||||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  |    
T  34745254 aatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactt 34745352  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |   ||||||| |||||| |||| ||||||||||||||| || ||||| ||||||    
T  34745353 acataatgaatctaaaaaatcaaatgtttcttataataaagatcggagaaagtat 34745407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 43135139 - 43135196
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||| || ||||||||||||||| |||| |||  |||||||||||||||||||    
T  43135139 tattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagtatta 43135196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 667
Target Start/End: Original strand, 43292566 - 43292707
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaata 624  Q
    |||||||||||||| |||||||||||||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  ||    
T  43292566 atactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactta 43292664  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
       ||||||  ||||||||||| ||||||||||||||||||||    
T  43292665 cataatgaacctaaaaagtcaaatgtttcttataataaggacc 43292707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 43409985 - 43409832
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaat 623  Q
    ||||||||||||||| |||||||| || ||||| |||       ||||||||| |||| | ||||| || || ||||  |||| || ||||||||||  |    
T  43409985 aatactccctccggtccttattattagcaacaaatgactttttcggttcattgaataattaatgtacctcgt-tataaatatagactagatacattactt 43409887  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    || |||||||  ||||||||||| || | |||||||||||||||||||| |||||    
T  43409886 atacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 43409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 627 - 679
Target Start/End: Complemental strand, 16448838 - 16448786
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||||||  |||||||||| ||||||||||||  ||||||||||||||||||    
T  16448838 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggaggaagtatt 16448786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 614 - 678
Target Start/End: Complemental strand, 24178034 - 24177970
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||| ||||||| ||||||| |||||||| |||| ||||||||||  ||||||||||| |||||    
T  24178034 tacatcaaatattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtat 24177970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 677
Target Start/End: Original strand, 29690545 - 29690585
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  29690545 aaaaagttaattgtttcttataataaggaccggaggaagta 29690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 681
Target Start/End: Complemental strand, 35011274 - 35011207
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    |||||||| |||| ||||||| |||||| | |||| ||||||||||  ||||||||||| ||||||||    
T  35011274 tacattaattattgaatgaatctaaaaaattaactttttcttataaataggaccggaggtagtattat 35011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 30923974 - 30923920
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||| || ||||||||||||||| |||| |||  ||||||||||||||||    
T  30923974 tattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 682
Target Start/End: Original strand, 24822808 - 24822877
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||||||| ||| |||| ||| ||||||||||| | ||||||||||  ||||||||||| | |||||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaataggaccggagggaatattatt 24822877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 643
Target Start/End: Original strand, 27988117 - 27988190
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagt 643  Q
    |||||||| |||||| |||||||| || ||||  | |||| | ||||||||| |||||||||||| ||||||||    
T  27988117 gttcattgaataagtaatgtatctcgtttataaatttaactaaatacattaattattcaatgaatctaaaaagt 27988190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 643
Target Start/End: Original strand, 28045419 - 28045492
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagt 643  Q
    |||||||| |||||| |||||||| || ||||  | |||| | ||||||||| |||||||||||| ||||||||    
T  28045419 gttcattgaataagtaatgtatctcgtttataaatttaactaaatacattaattattcaatgaatctaaaaagt 28045492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Original strand, 34604890 - 34604931
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||| |||| ||||||||||||||||||||||||| |||||    
T  34604890 aaaaaatcaattgtttcttataataaggaccggagggagtat 34604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Original strand, 35583992 - 35584033
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||| || ||||||||||||||||||||||||| |||||    
T  35583992 aaaaagttaattgtttcttataataaggaccggagggagtat 35584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Original strand, 45372814 - 45372855
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||||| |||| |||||||||||||||||||| |||||    
T  45372814 aaaaagtcaattgttacttataataaggaccggagggagtat 45372855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 3e-44; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 526 - 682
Target Start/End: Complemental strand, 41487941 - 41487785
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||| ||  ||||||||||| |||    
T  41487941 atactccctccggtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattat 41487842  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    || |||||  ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  41487841 tctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtattatt 41487785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 47612441 - 47612289
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||||||||||| | |||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  47612441 aatactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgagatacattaatta 47612342  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||  ||||||||||  |||| || ||||||||||||||||| ||||    
T  47612341 ttcaatgaacctaaaaagtcatttgttgctaataataaggaccggagggagta 47612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 532 - 677
Target Start/End: Complemental strand, 41088996 - 41088851
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| |||||||||||||||||||||       |||| || || ||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  41088996 cctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattattcaatg 41088897  T
Q  632 aatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||| ||||||||||| |||||||| |||||||||||||||| ||||    
T  41088896 aatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 527 - 667
Target Start/End: Original strand, 29559436 - 29559576
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||| |||||| | |||||||||||||||||||||       ||||||| || ||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  29559436 tactacctccgatccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaattatt 29559535  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    |||||||| ||||||||||| |||||||| |||||||||||    
T  29559536 caatgaatctaaaaagtcaattgtttcttgtaataaggacc 29559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 526 - 683
Target Start/End: Complemental strand, 22618313 - 22618156
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||| ||||||| |||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||     
T  22618313 atactcactccggtccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaattac 22618214  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatta 683  Q
    ||||||||| |||||| ||||   |||||||||||||||| |||| | |||| |||||    
T  22618213 tcaatgaatctaaaaaatcaaaaatttcttataataaggaacggatggagtagtatta 22618156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 571 - 679
Target Start/End: Original strand, 41395705 - 41395813
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||| |||||| ||||||||||||| |||||||||||||| |||| |    
T  41395705 ttcattgtataagtgatgtatctagtctatatttataataagatatattaattattctatgaatctaaaaagtcaactttttcttataataagaaccgaa 41395804  T
Q  671 ggaagtatt 679  Q
    |||||||||    
T  41395805 ggaagtatt 41395813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 530 - 677
Target Start/End: Complemental strand, 10674269 - 10674122
Alignment:
Q  530 tccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaa 629  Q
    |||||||| | |||||||||||||||||||||       | |||||| | ||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  10674269 tccctccgatccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaattattcaa 10674170  T
Q  630 tgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||  ||||||||||| ||||| |||||||||| |||||||| ||||    
T  10674169 tgaacctaaaaagtcaaatgttttttataataagtaccggagggagta 10674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 672
Target Start/End: Complemental strand, 24164667 - 24164520
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||| | |||||||||||||||| ||||       |||||||| | ||||||||||||||||||||||||| |||| ||||||||||| ||    
T  24164667 aatactccctccgatccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttctaacaagatacattaatta 24164568  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||| |||||   ||||| |||| |||||||||||||||||||||||||    
T  24164567 ttctatgaaccaaaaaaatcaattgtttcttataataaggaccggagg 24164520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 574 - 679
Target Start/End: Complemental strand, 28248533 - 28248428
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||| ||||| |||||||||||||||||||  ||||     
T  28248533 attgtgtaagtgatgtatatagtctatatttataacgagatgcattaattattcaatgaatctaaaatgtcaattgtttcttataataaggactcgaggg 28248434  T
Q  674 agtatt 679  Q
    ||||||    
T  28248433 agtatt 28248428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 571 - 672
Target Start/End: Complemental strand, 45123350 - 45123249
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||| |||||| ||||||||||||| ||| ||||| |||||||||||    
T  45123350 ttcattgtataagtgatgtatctaatctatatttataataagatacattaattattctatgaatttaaaaagtcaacttttttttatagtaaggaccgga 45123251  T
Q  671 gg 672  Q
    ||    
T  45123250 gg 45123249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 526 - 671
Target Start/End: Complemental strand, 45025744 - 45025599
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||| ||||||||  ||||||||||||||| ||||       | |||||| | |||||||||||||||||||||||||||||| ||||||||||| |||    
T  45025744 atacttcctccggtctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaattat 45025645  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    || |||||   ||||| |||| ||||||||||||||||||||||||    
T  45025644 tctatgaaccaaaaaaatcaattgtttcttataataaggaccggag 45025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 526 - 682
Target Start/End: Complemental strand, 33901188 - 33901032
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||| ||||||||  ||||||||||||||| ||||       | |||||| | ||| |||||||||||||||||||||||||| ||||||||||| |||    
T  33901188 atacttcctccggtctttattataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacattaactat 33901089  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    || ||||||  ||||| |||| ||||||||||||||||||| ||||| |||| ||||    
T  33901088 tctatgaatcaaaaaaatcaattgtttcttataataaggacaggagggagtactatt 33901032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 526 - 677
Target Start/End: Complemental strand, 27320444 - 27320293
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||| ||| |||||||||||||||||||||       |||||||||||||||| |||| ||||||||||||||| ||  ||||| || || |||    
T  27320444 atactccctctggtccttattataagaaacaattgatttttttggttcattgtataagtaatgtttctagtctatatttacaataagatatatcaattat 27320345  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |  |||||  ||||||||||||| ||||||||||||||||| ||||| ||||    
T  27320344 tttatgaacttaaaaagtcaactttttcttataataaggacgggagggagta 27320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 584 - 672
Target Start/End: Original strand, 13860273 - 13860361
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||| |||||||||||||||||| ||||||    
T  13860273 tgatgtatctagtctatatttataacaatatacattaattatacaatgaatctaaaaagtcaattgtttcttataataaggatcggagg 13860361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 18064873 - 18064721
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||| |||||| |||| ||||||||||| ||||        ||||||||| |||||||||||||||||||||||||  ||  ||||||||||| ||    
T  18064873 aatactccatccggtccttaatataagaaacagttgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataagatacattaatta 18064774  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||| |||||  |||||||| |||| ||||||||| ||||||||||||| ||||    
T  18064773 ttctatgaacttaaaaagttaactttttcttatattaaggaccggagggagta 18064721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 534 - 678
Target Start/End: Original strand, 47484027 - 47484171
Alignment:
Q  534 tccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa 633  Q
    |||||| |||||||||||||||||||||         |||||||  |||||||||||||||||||||||||| ||  ||||||||||| ||||| |||||    
T  47484027 tccggtccttattataagaaacaattgattttttttattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaa 47484126  T
Q  634 tgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
      ||||||||||||| || |||||||||||||| ||||| |||||    
T  47484127 cctaaaaagtcaacttttacttataataaggacaggagggagtat 47484171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 527 - 662
Target Start/End: Original strand, 40234765 - 40234900
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||||||||||||||||||||||||||||||||||       | |||||||| ||| |||||||||||||||||||||| ||| |||||||| || || |    
T  40234765 tactccctccggttcttattataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacatgaattact 40234864  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||||||| ||| ||| |||   |||||||||||||    
T  40234865 caatgaatttaagaagacaaaaatttcttataataa 40234900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 580 - 681
Target Start/End: Complemental strand, 12807004 - 12806903
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||||||| ||||||||||||| ||  ||||||||||| ||||  |||||  ||||||||||||| ||||||||||||||||||||||| ||||||    
T  12807004 taagtgatgtatgtagtctatatttacaataagatacattaattattttatgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 12806905  T
Q  680 at 681  Q
    ||    
T  12806904 at 12806903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 534 - 667
Target Start/End: Original strand, 3633197 - 3633330
Alignment:
Q  534 tccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa 633  Q
    |||||| |||||||||||||||| ||||       |||||||| | |||||||||||||||||||| |||||||||||||||||| |  ||  |||||||    
T  3633197 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacatcacttaaacaatgaa 3633296  T
Q  634 tgtaaaaagtcaactgtttcttataataaggacc 667  Q
      ||||||||||| | ||||||||||||||||||    
T  3633297 cctaaaaagtcaaatatttcttataataaggacc 3633330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 569 - 646
Target Start/End: Original strand, 7999489 - 7999566
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaa 646  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||    
T  7999489 ggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaattatttaatgaacctaaaaagtcaa 7999566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 542 - 683
Target Start/End: Original strand, 37006470 - 37006612
Alignment:
Q  542 ttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    ||||||||||||||||||||        ||| ||||||||||||||||||| ||| |||||||| ||   |||||||||| ||||| |||||  ||||||    
T  37006470 ttattataagaaacaattgacttttttagtttattgtataagtgatgtatccagtttatatttacaatatgatacattaattattctatgaacttaaaaa 37006569  T
Q  642 gtcaa-ctgtttcttataataaggaccggaggaagtattatta 683  Q
    |||||  | ||||||||||||||||||||| ||||||||||||    
T  37006570 gtcaatttttttcttataataaggaccggatgaagtattatta 37006612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 580 - 677
Target Start/End: Complemental strand, 40198700 - 40198603
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||| ||||||| ||||||||||||| ||| |||| |||||| ||||| |||||  ||||||||||||| ||||||||||||||||||||||| ||||    
T  40198700 taagcgatgtatttagtctatatttacaacaagatgcattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 40198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 533 - 646
Target Start/End: Original strand, 7456424 - 7456537
Alignment:
Q  533 ctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatga 632  Q
    ||||||| |||||||||||||| | ||||       | |||||||||||| |||||||||||||||||||||| ||| ||||||||||| || |||||||    
T  7456424 ctccggtccttattataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaattactcaatga 7456523  T
Q  633 atgtaaaaagtcaa 646  Q
    || |||||||||||    
T  7456524 atctaaaaagtcaa 7456537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 678
Target Start/End: Complemental strand, 14543403 - 14543266
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||        ||| ||| | |||||||||||||||||||||||||| | | ||||||||||| || ||||||||| |||||    
T  14543403 cttattataagaaacaattgattgtttaagtttattatgtaagtgatgtatctagtctatatttacatcaagatacattaattactcaatgaatctaaaa 14543304  T
Q  641 agtcaactgtttcttataataaggaccggaggaagtat 678  Q
    | ||||  |||||||||||||| ||| ||||| |||||    
T  14543303 aatcaaaagtttcttataataaagacaggagggagtat 14543266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 525 - 646
Target Start/End: Complemental strand, 39413979 - 39413858
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||| ||| || || ||||||||||||||||||        ||||||||||||||||||||||||| || ||||||| |||  |||||||||| ||    
T  39413979 aatactccttccagtcctaattataagaaacaattgattttttaagttcattgtataagtgatgtatctaatcaatatttacaacatgatacattaatta 39413880  T
Q  625 ttcaatgaatgtaaaaagtcaa 646  Q
    |||||| ||| |||||||||||    
T  39413879 ttcaattaatataaaaagtcaa 39413858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 665
Target Start/End: Original strand, 31902959 - 31903087
Alignment:
Q  537 ggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgt 636  Q
    ||||||||||||||||||||| |||        ||| ||| | ||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||  |    
T  31902959 ggttcttattataagaaacaactgactttttaagtttattatgtaaatgatgtatctagtctatatttatgacgaaatacattaattattcaatgaacct 31903058  T
Q  637 aaaaagtcaactgtttcttataataagga 665  Q
    ||||| | || | ||| ||||||||||||    
T  31903059 aaaaaattaattattttttataataagga 31903087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 574 - 658
Target Start/End: Original strand, 29835130 - 29835214
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttata 658  Q
    ||||| ||| ||||||||||| | |||||||| ||||||||| ||||| |||||||||||| |||||||| ||  ||||||||||    
T  29835130 attgtgtaaatgatgtatctaatttatatttacaacgagatatattaattattcaatgaatctaaaaagttaatagtttcttata 29835214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 677
Target Start/End: Original strand, 10007659 - 10007725
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||||||||||  ||||||||||| ||||    
T  10007659 agatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggagggagta 10007725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 678
Target Start/End: Original strand, 33901138 - 33901188
Alignment:
Q  628 aatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  33901138 aatgaatctaaaaagtcaaatgtttcttataataaagaccggaggaagtat 33901188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 648
Target Start/End: Original strand, 47280215 - 47280293
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaact 648  Q
    ||||||||||||| | |||||| ||||||||||||| ||  ||||||||||| ||||| |||||  |||||||||||||    
T  47280215 gttcattgtataaataatgtatttagtctatatttacaataagatacattaattattctatgaacctaaaaagtcaact 47280293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 679
Target Start/End: Complemental strand, 48949028 - 48948939
Alignment:
Q  592 ctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa--agtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||||||||||||| ||||||||||| ||||| |||||   ||||  ||| || | |||||||||||||||||||||| |||||||    
T  48949028 ctagtctatatttataacaagatacattaattattctatgaaccaaaaaagagttaattatttcttataataaggaccggagaaagtatt 48948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 613 - 678
Target Start/End: Complemental strand, 24932446 - 24932381
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||| ||||| |||||  ||||||||||| | ||||||||||||||||||| |||||||||    
T  24932446 atacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccgaaggaagtat 24932381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 527 - 680
Target Start/End: Original strand, 47612289 - 47612442
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaatat 625  Q
    ||||||||||||| |||||||| || ||||| |||       ||||||||| |||| | |||||||| || ||||  |||| || ||||||||||  |||    
T  47612289 tactccctccggtccttattattagcaacaaatgactttttaggttcattgaataattaatgtatctcgt-tataaatatagactagatacattacttat 47612387  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
     |||||||  ||||||||||| || | |||||||||||||||||||| |||||||    
T  47612388 acaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtatta 47612442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 614 - 678
Target Start/End: Original strand, 2523856 - 2523920
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||| || ||||||||| ||||||||||||| ||||||||||  ||||||||||| |||||    
T  2523856 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtat 2523920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 678
Target Start/End: Original strand, 45025592 - 45025744
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaata 624  Q
    |||||| ||||||| |||||||||||||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  ||    
T  45025592 atactcactccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactta 45025690  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
       ||||||| |||||| |||| ||||||||||||||| |||||||||||||||    
T  45025691 cataatgaatctaaaaaatcaaatgtttcttataataaagaccggaggaagtat 45025744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 525 - 677
Target Start/End: Original strand, 36245373 - 36245525
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||  |||||||||||| ||||       | ||||||| |||| |||||||| | |||||||||    || |||||||| || ||    
T  36245373 aatactccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaatta 36245472  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
     ||||||||| ||||||||||| | ||||||||||  ||||| ||||| ||||    
T  36245473 ctcaatgaatctaaaaagtcaattttttcttataaataggacaggagggagta 36245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 627 - 682
Target Start/End: Complemental strand, 40234815 - 40234760
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| |||| ||||    
T  40234815 caatgaatctaaaaagtcaattgtttcttataataagaaccggagggagtaatatt 40234760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 598 - 673
Target Start/End: Complemental strand, 40600000 - 40599925
Alignment:
Q  598 tatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    |||||||||||||| ||||||||| |||| | ||||| ||||||||||| ||||  ||||||||| || |||||||    
T  40600000 tatatttataacgaaatacattaattatttattgaatctaaaaagtcaattgttgtttataataaagatcggagga 40599925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 677
Target Start/End: Original strand, 11668098 - 11668164
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| || || ||||||||||||||||||||| | ||||||||||  ||||||| ||||||||    
T  11668098 agatacatcaattaatcaatgaatgtaaaaagtcaaatttttcttataaataggaccgaaggaagta 11668164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 33039573 - 33039699
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattc--aatgaatgtaa 638  Q
    ||||||| |||||||||||||       |||||||||| | || ||||||||||||||||||||| |||  |||||||||| |||||   || ||  |||    
T  33039573 cttattaaaagaaacaattgactttttaggttcattgtgttagggatgtatctagtctatatttacaacatgatacattaattattctatataaacctaa 33039672  T
Q  639 aaagtcaactgtttcttataataagga 665  Q
    |||||||| |||| |||| ||||||||    
T  33039673 aaagtcaattgttccttaaaataagga 33039699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 627 - 671
Target Start/End: Complemental strand, 7456468 - 7456424
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||    
T  7456468 caatgaatctaaaaagtcaaatatttcttataataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 672
Target Start/End: Original strand, 10674223 - 10674267
Alignment:
Q  628 aatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||    
T  10674223 aatgaatctaaaaagtcaattgtttcttataataaggatcggagg 10674267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 627 - 671
Target Start/End: Original strand, 22618262 - 22618306
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  22618262 caatgaacctaaaaagtcaattgtttcttataataaggaccggag 22618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 680
Target Start/End: Original strand, 24164624 - 24164668
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||    
T  24164624 taaaaagtcaaatgtttcttataataaggatcggagggagtatta 24164668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 672
Target Start/End: Original strand, 41088960 - 41088996
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||||||||||| |||||||||||||||||||||||||    
T  41088960 taaaaagtcaattgtttcttataataaggaccggagg 41088996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 658
Target Start/End: Original strand, 34117982 - 34118069
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttata 658  Q
    ||||||| |||| |||||||| | |||||||||    || ||||||||||| ||  |||||||| ||||||||||||| |||||||||    
T  34117982 ttcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttata 34118069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 636 - 670
Target Start/End: Complemental strand, 3633231 - 3633197
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||||||| |||||||||||||||||||||||    
T  3633231 taaaaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 613 - 683
Target Start/End: Original strand, 4826846 - 4826916
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatta 683  Q
    |||||| || ||||||||||||  ||||||| || |||||||||||   ||||||||||| ||||||||||    
T  4826846 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtattatta 4826916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 678
Target Start/End: Original strand, 4132468 - 4132533
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||||||||||||| || |||||||| || | ||  ||||||||| |||| ||||||||||    
T  4132468 atacattaaatattcaatgtatctaaaaagttaagttttgtttataataatgaccagaggaagtat 4132533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 677
Target Start/End: Complemental strand, 29559477 - 29559436
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||| |||||||||||||||||| |||||| ||||    
T  29559477 taaaaagtcaattgtttcttataataaggatcggaggtagta 29559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 680
Target Start/End: Complemental strand, 36245425 - 36245372
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||  |||||||||| ||||||||||||  ||||||||||| |||||||    
T  36245425 caatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagggagtatta 36245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Original strand, 41487900 - 41487941
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||| |||| ||||||||||||||||||||||||| |||||    
T  41487900 aaaaaatcaattgtttcttataataaggaccggagggagtat 41487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 47484070 - 47484021
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagt 676  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||| |||||    
T  47484070 caatgaataaaaaaaatcaattgtttcttataataaggaccggatgaagt 47484021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 678
Target Start/End: Complemental strand, 3944 - 3807
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||    
T  3944 cttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaagtattcaatgaatcaaaaa 3845  T
Q  641 agtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  3844 agtcaattgtttcttataataaggaccggagggagtat 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 561
Target Start/End: Original strand, 3807 - 3842
Alignment:
Q  526 atactccctccggttcttattataagaaacaattga 561  Q
    |||||||||||||| |||||||||||||||||||||    
T  3807 atactccctccggtccttattataagaaacaattga 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 2913484 - 2913331
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||||||||||| |||||||||       |||||||||||||||| ||||||||||||||||||||||||||   ||||||| ||    
T  2913484 aatactccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgacgaacattaatta 2913385  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||| |||||    
T  2913384 ttcaatgaatctaaaaagtcaaatgttgcttataataaggaccggagggagtat 2913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 527 - 682
Target Start/End: Complemental strand, 30438892 - 30438737
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||| | |||||||||||||| |||| |       |||| |||||||||||||||||||||||||||||||| ||  | ||||||||| ||||    
T  30438892 tactccctccgatccttattataagaaataattaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaatacattaattatt 30438793  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    | |||||| ||||||||||||| |||||||||||||||| || ||| |||||||||    
T  30438792 ctatgaatctaaaaagtcaactttttcttataataaggatcgaagggagtattatt 30438737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 527 - 659
Target Start/End: Complemental strand, 23916276 - 23916145
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||||||||||       | |||||||| || ||||| |||||| |||||||||||||||||||||||||||||||    
T  23916276 tactccctccggtccttattataagaaacaattgactttttagattcattgtgtatgtgatatatctaatctatatttataacgagatacattaaatatt 23916177  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataa 659  Q
     |||||| || ||||||||||||||| ||||||    
T  23916176 taatgaacgt-aaaagtcaactgttttttataa 23916145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 570 - 680
Target Start/End: Original strand, 359587 - 359697
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||||||||||| |     
T  359587 gttcattgtgtaagtgatgtatctaatctatatttataacgagatacattagttattcattgaacctaaaaagtcaattgtttcttataataaggacagt 359686  T
Q  670 aggaagtatta 680  Q
    | |||||||||    
T  359687 atgaagtatta 359697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 526 - 679
Target Start/End: Original strand, 28605568 - 28605721
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||| ||| ||||||||||||||||||| |       |||||||||| |||||||||||| ||  ||||||||| ||  ||||||||||| |||    
T  28605568 atactccctctggtccttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacattaattat 28605667  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    || |||||| ||||| |||| || ||||||||||||||||||||| | ||||||    
T  28605668 tctatgaatctaaaaggtcagctttttcttataataaggaccggatggagtatt 28605721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 569 - 671
Target Start/End: Original strand, 12217532 - 12217635
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaa-ctgtttcttataataaggacc 667  Q
    |||| |||||||||||||||||||||||||||||||| ||  ||||||||||| ||||| |||||| |||||||||||  | ||||||||||||||||||    
T  12217532 ggtttattgtataagtgatgtatctagtctatatttacaataagatacattaattattctatgaatctaaaaagtcaatttttttcttataataaggacc 12217631  T
Q  668 ggag 671  Q
    ||||    
T  12217632 ggag 12217635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 569 - 671
Target Start/End: Original strand, 29284539 - 29284641
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||  |||| ||| || |||||||||| |||||||| |    
T  29284539 ggttcattatgtaagtgatgtatctagtctatatttataacgagatgcattaattattcaatgaaactaaacagttaattgtttcttattataaggacgg 29284638  T
Q  669 gag 671  Q
    |||    
T  29284639 gag 29284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 570 - 670
Target Start/End: Complemental strand, 8265078 - 8264978
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||   ||||| |||| ||||| ||||||||| ||||||    
T  8265078 gttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaactaaaaaaatcaattgttttttataataaagaccgg 8264979  T
Q  670 a 670  Q
    |    
T  8264978 a 8264978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 527 - 662
Target Start/End: Complemental strand, 9343269 - 9343134
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||||| |||||| ||||||||| |||||||||||         || ||||| ||| | |||||||||||||||||||||||| ||||||||||| ||||    
T  9343269 tactccttccggtccttattataggaaacaattgacttttcaaatttattgtgtaaataatgtatctagtctatatttataacaagatacattaattatt 9343170  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    | |||||| ||||||||||| | |||||||||||||    
T  9343169 ctatgaatctaaaaagtcaattatttcttataataa 9343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 525 - 672
Target Start/End: Original strand, 12605607 - 12605754
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||| | |||||||||||||||||||||         ||||||   |||||||||||| ||||||||||||| ||  ||||||||||| ||    
T  12605607 aatactccctccgttccttattataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacattaatta 12605706  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||| |||||  ||||| ||||||| ||||||||||||| |||||||||    
T  12605707 ttccatgaacctaaaatgtcaactttttcttataataaagaccggagg 12605754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 584 - 657
Target Start/End: Original strand, 33127842 - 33127915
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttat 657  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||| ||| ||||||||||| ||||||||||    
T  33127842 tgatgtatctagtctatatttgtaacaagatacattaattattcaataaatctaaaaagtcaattgtttcttat 33127915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 525 - 677
Target Start/End: Original strand, 10145212 - 10145364
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||| ||||||| | |||||||||||||| ||||||       | |||||  |||||||||||||||||||||||||||| ||  ||||||||||| ||    
T  10145212 aataccccctccgatccttattataagaaataattgatttttttgattcatcatataagtgatgtatctagtctatatttacaataagatacattaatta 10145311  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||  |||||  ||||||||||| | ||| ||||||||| ||||| ||| ||||    
T  10145312 ttttatgaacctaaaaagtcaatttttttttataataaagaccgaagggagta 10145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 23916226 - 23916276
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  23916226 caatgaatctaaaaagtcaattgtttcttataataaggaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 611 - 680
Target Start/End: Original strand, 2913416 - 2913485
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||||  ||| |||||||  ||||||||||| |||| |||||||||||||||||||| |||||||    
T  2913416 agatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccggagggagtatta 2913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 614 - 677
Target Start/End: Complemental strand, 17598173 - 17598110
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| ||||| || ||| ||||||||||| | |||||||||| |||||||||||||||||    
T  17598173 tacattaattattctataaatttaaaaagtcaattttttcttataagaaggaccggaggaagta 17598110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 678
Target Start/End: Original strand, 2230432 - 2230499
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||||| || ||||||||| |||||||||||   ||||||||||  ||||||||||| |||||    
T  2230432 agatacattaattactcaatgaatctaaaaagtcaaagttttcttataaataggaccggagggagtat 2230499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 677
Target Start/End: Original strand, 33119947 - 33120051
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||||||| || ||||| | ||||||||||   || ||||||||  | |||||||||||| |||||||||||   ||||||||||  || ||||||    
T  33119947 ttcattgtataaatgttgtatttggtctatatttg--acaagatacatcgattattcaatgaatctaaaaagtcaaaattttcttataaatagaaccgga 33120044  T
Q  671 ggaagta 677  Q
    |||||||    
T  33120045 ggaagta 33120051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 641
Target Start/End: Complemental strand, 33128931 - 33128860
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    ||||||| ||||| | |||||| |||| ||| ||||||| |||||||||||| |||| ||||||| ||||||    
T  33128931 gttcattttataaattatgtatatagtttatctttataatgagatacattaattattaaatgaatctaaaaa 33128860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 682
Target Start/End: Complemental strand, 12605658 - 12605604
Alignment:
Q  628 aatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||  ||||| |||| |||||||||||||||||| |||||| |||||||||    
T  12605658 aatgaataaaaaaaatcaattgtttcttataataaggaacggagggagtattatt 12605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 575 - 641
Target Start/End: Original strand, 26484331 - 26484397
Alignment:
Q  575 ttgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    |||| ||| |||||||| ||||||||||||||||| |||| |||||| ||||| || ||| ||||||    
T  26484331 ttgtgtaaatgatgtatgtagtctatatttataacaagatgcattaattattccataaatctaaaaa 26484397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 665
Target Start/End: Complemental strand, 12240207 - 12240113
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||||| ||| ||||||||||| | ||||||||||| |||||   |||| |||||||| ||  |||||| |||| | ||| ||||||||||||    
T  12240207 ggttcattgtgtaaatgatgtatctaatttatatttataatgagat--gttaattattcaattaacctaaaaaatcaattattttttataataagga 12240113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 8e-42; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 530 - 678
Target Start/End: Complemental strand, 20502233 - 20502085
Alignment:
Q  530 tccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaa 629  Q
    |||||||||| ||||||||||||||||||| |       |||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||| |    
T  20502233 tccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattcta 20502134  T
Q  630 tgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  20502133 tgaatctaaaaagtcaactttttcttataataaggaccggaggaagtat 20502085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 527 - 677
Target Start/End: Complemental strand, 13932610 - 13932460
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||| ||| |||||||||||||| ||||||       |||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||     
T  13932610 tactccctctggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaattatc 13932511  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||  ||||||||||| |||||||||||| |||||||||||| ||||    
T  13932510 caatgaacataaaaagtcaattgtttcttataacaaggaccggagggagta 13932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 29452043 - 29451891
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||| | |||||||||||||||||||||       |||||||||| ||||||||||||||||| |||||||| ||  ||||||||||| ||    
T  29452043 aatactccctccgatccttattataagaaacaattgatttttt-ggttcattgtgtaagtgatgtatctagtatatatttacaataagatacattaatta 29451945  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||| |||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  29451944 ttctatgaatctaaaaaatcaactttttcttataataaggaccggagggagtat 29451891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 525 - 672
Target Start/End: Original strand, 29874314 - 29874461
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||||||||||||||| ||||||||||||||||       |||||||||| ||||||||||||||||||||||||| |||  | ||||||||| ||    
T  29874314 aatactccctccggttcttaatataagaaacaattgacttttttggttcattgtttaagtgatgtatctagtctatatttttaataaaatacattaatta 29874413  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||| |||||  |||||||| |||| ||||||||| |||||||||||||    
T  29874414 ttctatgaacctaaaaagttaactttttcttatattaaggaccggagg 29874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 527 - 677
Target Start/End: Complemental strand, 38978891 - 38978741
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||| | ||||||||||||||||||| |       |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| ||||    
T  38978891 tactccctccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaattatt 38978792  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    | |||||| ||||||||||||| ||||||||||||||||| ||||| ||||    
T  38978791 ctatgaatctaaaaagtcaactttttcttataataaggactggagggagta 38978741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 526 - 678
Target Start/End: Original strand, 73782 - 73934
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||| ||||||||||       | |||||||| ||| ||||||||||| ||| | |||||||||||||| ||||| |||    
T  73782 atactccctccggtccttattataaaaaacaattgactttttagattcattgtgtaaatgatgtatctactctttgtttataacgagatatattaattat 73881  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||  | ||||||||| ||||||||||||||| ||||||||| |||||    
T  73882 tcaatgaacctgaaaagtcaattgtttcttataataaagaccggagggagtat 73934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 580 - 679
Target Start/End: Complemental strand, 19211376 - 19211277
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||||||||||||||||||||| ||| ||||||||||| || ||||||||| |||||||||||  |||||||||||||||||||||||| ||||||    
T  19211376 taagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatataaaaagtcaaaagtttcttataataaggaccggagggagtatt 19211277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 526 - 679
Target Start/End: Original strand, 33247290 - 33247442
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||||| |||||| |       |||||||| |||||||||| ||||||||||||||||| ||  ||||| ||||| |||    
T  33247290 atactccctccggtccttattataagagacaattaacttttttggttcattctataagtgatatatctagtctatatttacaataagatatattaattat 33247389  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    | | ||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  33247390 tta-tgaacctaaaaagtcaactttttcttataacaaggaccggaggaagtatt 33247442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 526 - 681
Target Start/End: Complemental strand, 7537171 - 7537016
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||| ||||||||||       |||||||||| ||||||||||||||||| ||||||||  |  ||||||||||| |||    
T  7537171 atactccctccggtccttattataaaaaacaattgatttttttggttcattgtgtaagtgatgtatctagtatatatttacgataagatacattaattat 7537072  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    || || ||  ||| ||||||| | |||||||||||||| |||||||| ||||||||    
T  7537071 tctattaacctaagaagtcaattttttcttataataagaaccggagggagtattat 7537016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 532 - 681
Target Start/End: Complemental strand, 13279030 - 13278881
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| |||||||||||||||| ||||       | || ||||| ||||||||||||||| | ||||||||||||||||| |||||| ||||||||     
T  13279030 cctccggtccttattataagaaacagttgactttttagatttattgtgtaagtgatgtatctaatttatatttataacgagatgcattaactattcaata 13278931  T
Q  632 aatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    ||  |||||| |||| |||||||||||| || ||||| ||| ||||||||    
T  13278930 aacctaaaaaatcaattgtttcttataacaaagaccgaagggagtattat 13278881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 526 - 667
Target Start/End: Original strand, 24173418 - 24173559
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||||||| || |||||||||||||| ||||||        ||||||||| ||||||||||||||| |||||||||  ||  ||||||||||| |||    
T  24173418 atactccctccagtccttattataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacattaattat 24173517  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    || || ||  ||||||||||||| ||||||||||||||||||    
T  24173518 tctataaacttaaaaagtcaactttttcttataataaggacc 24173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 575 - 679
Target Start/End: Original strand, 35318561 - 35318665
Alignment:
Q  575 ttgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaa 674  Q
    |||||||| | |||||||||||| ||||||||||||||||||||||| |||||||| ||  |||||| |||| |||||||| |||||||||||| | |||    
T  35318561 ttgtataaataatgtatctagtccatatttataacgagatacattaattattcaataaacttaaaaaatcaattgtttcttgtaataaggaccgaaagaa 35318660  T
Q  675 gtatt 679  Q
    |||||    
T  35318661 gtatt 35318665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 520 - 666
Target Start/End: Original strand, 29002734 - 29002880
Alignment:
Q  520 aaggcaatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacatt 619  Q
    |||||| ||||||||||| | ||| |||||||||||||||||       |||||||||| |||||||||||||||||||||||||   |  ||||| |||    
T  29002734 aaggcagtactccctccgatccttgttataagaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattttcgataagatatatt 29002833  T
Q  620 aaatattcaatgaatgtaaaaagtcaactgtttcttataataaggac 666  Q
    || ||||| || ||  |||||| |||||| |||||||||||||||||    
T  29002834 aattattccataaacctaaaaaatcaactttttcttataataaggac 29002880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 525 - 677
Target Start/End: Original strand, 32455138 - 32455288
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||| ||||||||||  |||||       | ||||||||  ||||||||||||||||||||||||| ||  ||||||||||| ||    
T  32455138 aatactccctccggtccttgttataagaaa--attgacttttttgattcattgtggaagtgatgtatctagtctatatttacaataagatacattaatta 32455235  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||| |||||  ||||| || |||| ||||||||||||||||| ||||| ||||    
T  32455236 ttctatgaacttaaaatgttaactttttcttataataaggactggagggagta 32455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 5355702 - 5355550
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||||| ||||        ||||||||| |||||||||||| |||| |||||||| ||  ||||||||||| ||    
T  5355702 aatactccctccggtccttattataagaaacagttgacttttttagttcattgtgtaagtgatgtatttagtttatatttacaataagatacattaatta 5355603  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||| |||||  ||||| || |||| ||||||| ||||| || |||||| ||||    
T  5355602 ttctatgaacctaaaatgttaactttttcttagaataaagatcggagggagta 5355550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 527 - 677
Target Start/End: Complemental strand, 27600907 - 27600758
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||||| |||| | |||||||||||||| ||||||       | |||||||| |||||||| |||||| |||||||||| ||  ||||||||||| ||||    
T  27600907 tactccatccgatccttattataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacattaattatt 27600808  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    | |||||  ||||||||||| | ||||||||||||| ||||||||| ||||    
T  27600807 ctatgaacttaaaaagtcaa-tttttcttataataaagaccggagggagta 27600758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 542 - 678
Target Start/End: Complemental strand, 35205057 - 35204922
Alignment:
Q  542 ttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    ||||||||||||||||||||        ||||||||| |||| ||||||||||| ||||||||| ||  ||||||||||| ||||| |||||  ||||||    
T  35205057 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaattattctatgaacctaaaaa 35204958  T
Q  642 gtcaactgtttcttataataaggaccggaggaagtat 678  Q
     |||||| |||||||||||||| || ||||| |||||    
T  35204957 -tcaactttttcttataataagtacaggagggagtat 35204922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 542 - 678
Target Start/End: Original strand, 35212102 - 35212237
Alignment:
Q  542 ttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    ||||||||||||||||||||        ||||||||| |||| ||||||||||| ||||||||| ||  ||||||||||| ||||| |||||  ||||||    
T  35212102 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaattattctatgaacctaaaaa 35212201  T
Q  642 gtcaactgtttcttataataaggaccggaggaagtat 678  Q
     |||||| |||||||||||||| || ||||| |||||    
T  35212202 -tcaactttttcttataataagtacaggagggagtat 35212237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 658
Target Start/End: Complemental strand, 13128294 - 13128211
Alignment:
Q  575 ttgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttata 658  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||  |||||||| || | |||||||||    
T  13128294 ttgtgtaagtgatgcatctagtctatatttataacgagatatattaattattcaataaacataaaaagttaattatttcttata 13128211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 541 - 672
Target Start/End: Original strand, 9630248 - 9630379
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    ||||||||||||||||||| |       |||||||||| |||||||| ||| |||  |||||||| ||  ||||||||||| ||||| |||||| |||||    
T  9630248 cttattataagaaacaattaatttttttggttcattgtgtaagtgatatatttagattatatttacaataagatacattaattattctatgaatctaaaa 9630347  T
Q  641 agtcaactgtttcttataataaggaccggagg 672  Q
    | |||| | ||| ||||||||| |||||||||    
T  9630348 aatcaattttttgttataataaagaccggagg 9630379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 574 - 672
Target Start/End: Original strand, 33970703 - 33970801
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||||||||| |||||||| |||| ||||||| |||  | ||||||||| ||||| |||||  |||| | |||||| |||||||||||||||||||||||    
T  33970703 attgtataaatgatgtatttagtatatatttttaataaaatacattaattattctatgaaactaaacaatcaactttttcttataataaggaccggagg 33970801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 637 - 680
Target Start/End: Original strand, 5355660 - 5355703
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  5355660 aaaaagtcaactgtttcttataataaggaccggagggagtatta 5355703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 673
Target Start/End: Original strand, 13278985 - 13279031
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13278985 caataaatctaaaaagtcaactgtttcttataataaggaccggagga 13279031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 73833 - 73782
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| |||||    
T  73833 caatgaatctaaaaagtcaattgttttttataataaggaccggagggagtat 73782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 8680640 - 8680690
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||| ||||    
T  8680640 caatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 8680690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 13789729 - 13789882
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaat 623  Q
    ||||||||||||||| ||  |||||||||||| || |       | ||||||| |||| |||||||| | ||||| ||| |||| | || |||||||| |    
T  13789729 aatactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaag-tacattaatt 13789827  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||||| | ||||||||||| ||||||||||  || |||||||| |||||    
T  13789828 attcaatgaatctgaaaagtcaactttttcttataaatagaaccggagggagtat 13789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 561
Target Start/End: Original strand, 7537018 - 7537054
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattga 561  Q
    |||||||||||||||||||||||||||||| ||||||    
T  7537018 aatactccctccggttcttattataagaaaaaattga 7537054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 679
Target Start/End: Original strand, 29374250 - 29374321
Alignment:
Q  608 acgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||||||  | ||||||||| || ||||||||||||||| |||| |||  ||||||||||| ||||||    
T  29374250 acgagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 677
Target Start/End: Complemental strand, 38394490 - 38394427
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| |||||||||||| ||||||||||| | ||||||||||  |||| |||||| ||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggatcggagggagta 38394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 617 - 659
Target Start/End: Original strand, 6604411 - 6604453
Alignment:
Q  617 attaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||    
T  6604411 attaattattcaatgaatttaaaaagtcaattgtttcttataa 6604453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 590
Target Start/End: Complemental strand, 8680690 - 8680627
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgta 590  Q
    ||||||||||||| |||||||||||||||| ||||       |||||||||| |||||||||||    
T  8680690 tactccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgta 8680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 677
Target Start/End: Complemental strand, 15968376 - 15968310
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||| |||| ||||||| |||||| | |||| ||||||||||  ||||||||||| ||||    
T  15968376 agatacattaattattgaatgaatctaaaaaattaactttttcttataaataggaccggaggtagta 15968310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 30132887 - 30132937
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||  ||||||| || ||||||||||||||||||||||||| ||||    
T  30132887 caatgaatcaaaaaagttaattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 1643439 - 1643496
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||| |||| || ||||||||||||||| ||||||||  ||||||||||| |||||||    
T  1643439 tattgaatgtatctaaaaagtcaactgtctcttataaataggaccggagggagtatta 1643496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 678
Target Start/End: Original strand, 3814029 - 3814121
Alignment:
Q  586 atgtatctagtctatatt-tataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||| ||||||||||| |||| | || |||||||| ||||||| |||| ||||||||||| | ||||||||||  | ||||||||| |||||    
T  3814029 atgtatttagtctatattctataccaag-tacattaattattcaacgaatctaaaaagtcaattttttcttataaacaagaccggagggagtat 3814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 682
Target Start/End: Original strand, 29452001 - 29452046
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||| |||| |||||||||||||||||| |||||| |||||||||    
T  29452001 aaaaaatcaattgtttcttataataaggatcggagggagtattatt 29452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 682
Target Start/End: Complemental strand, 29874356 - 29874311
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||||| ||||||||||| |||| |||||||| |||||||||    
T  29874356 aaaaagtcaattgtttcttatattaagaaccggagggagtattatt 29874311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 30132832 - 30132873
Alignment:
Q  518 ataaggcaatactccctccggttcttattataagaaacaatt 559  Q
    |||||| ||||||||||||||| |||||||||||||| ||||    
T  30132832 ataaggaaatactccctccggtccttattataagaaaaaatt 30132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 3e-41; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 527 - 678
Target Start/End: Original strand, 25756711 - 25756862
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||| ||||||       |||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||     
T  25756711 tactccctccggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaattatc 25756810  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||| |||||    
T  25756811 caatgaacataaaaagtcaattgtttcttataataaggaccggagggagtat 25756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 527 - 681
Target Start/End: Original strand, 37895254 - 37895408
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||||| ||||       ||||||||||||||||||||||||||||||| ||||| ||  | ||||||||| ||||    
T  37895254 tactccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatctagtctacatttacaataaaatacattaattatt 37895353  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    | |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  37895354 ctatgaatctaaaaagtcaactttttcttataataaggaccggagggagtattat 37895408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 530 - 678
Target Start/End: Complemental strand, 54864210 - 54864062
Alignment:
Q  530 tccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaa 629  Q
    |||||||||| ||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||| |    
T  54864210 tccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattaattattcta 54864111  T
Q  630 tgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||  ||||||||||||| ||||||||||||||||||||||| |||||    
T  54864110 tgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 54864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 683
Target Start/End: Original strand, 29686397 - 29686555
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||||| ||||       |||||||||| ||| |||||||||||||||||||||||||| | ||||||||| ||    
T  29686397 aatactccctccggtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaatta 29686496  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatta 683  Q
    | |||||||| |||||| | || ||||||||||||||||||||||||| ||||| ||||    
T  29686497 tacaatgaatttaaaaaattaattgtttcttataataaggaccggagggagtatgatta 29686555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 43141763 - 43141916
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||| |||||||||| ||||||||||||||||||| |       |||||||||||||||||||||||||| |||||||||| ||  ||||||||||| ||    
T  43141763 aatattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaatta 43141862  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||| |||||  ||||||||||||| ||||||||||||| |||||||||||||||    
T  43141863 ttctatgaacctaaaaagtcaactttttcttataataaagaccggaggaagtat 43141916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 527 - 681
Target Start/End: Original strand, 36196364 - 36196518
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||||||||||       |||||||| |||||||||||||| ||||||| ||||| ||  ||||||||||| ||||    
T  36196364 tactccctccggtccttattataagaaacaattgatttttttggttcattttataagtgatgtatatagtctacatttacaataagatacattaattatt 36196463  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    | |||||| |||||| |||| | ||||||||||||||||||||||| ||||||||    
T  36196464 ctatgaatctaaaaaatcaattttttcttataataaggaccggagggagtattat 36196518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 541 - 671
Target Start/End: Complemental strand, 54673445 - 54673315
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||       |||||||| | ||||||||||||||||||||||||||||||||||| |||||  |||||||||||  |||||    
T  54673445 cttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatatttataacgagatgcattacttattcaatgaacctaaaa 54673346  T
Q  641 agtcaactgtttcttataataaggaccggag 671  Q
    |||||| ||||||||||||||||||||||||    
T  54673345 agtcaaatgtttcttataataaggaccggag 54673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 528 - 672
Target Start/End: Original strand, 56491072 - 56491216
Alignment:
Q  528 actccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattc 627  Q
    |||||||||||| ||||||||||| | |||||||       |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  56491072 actccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattc 56491171  T
Q  628 aatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||||||  ||||||||||  |||| ||||||||||||||| ||||    
T  56491172 aatgaacttaaaaagtcatttgttgcttataataaggacccgagg 56491216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 526 - 677
Target Start/End: Complemental strand, 33615929 - 33615778
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||| ||||||||||       | |||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||     
T  33615929 atactccctccggtccttattataaaaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattac 33615830  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||| |||||| ||||  |||||||||||||||||||||||| ||||    
T  33615829 tcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagta 33615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 525 - 680
Target Start/End: Original strand, 33622877 - 33623032
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| ||||||||||||||||||| |       ||||||||||||| |||||||||||||| |||||||| ||  ||||||||||| ||    
T  33622877 aatactccctccggtccttattataagaaacaattaacttttttggttcattgtataggtgatgtatctagtttatatttacaataagatacattaatta 33622976  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||| ||||| |||||||||||| | |||||||||||| ||| |||||| |||||||    
T  33622977 ttctatgaacgtaaaaagtcaattttttcttataatagggatcggagggagtatta 33623032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 527 - 678
Target Start/End: Original strand, 32193474 - 32193625
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||||||||||       |||||||| | ||||| ||||||||||||||||||| |||  || |||||||| ||||    
T  32193474 tactccctccggtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatctagtctatatttctaataaggtacattaattatt 32193573  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    | |||||  |||||| |||||  |||||||||||||||||||||||||||||    
T  32193574 ctatgaacttaaaaaatcaacgttttcttataataaggaccggaggaagtat 32193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 527 - 678
Target Start/End: Complemental strand, 35877463 - 35877312
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||| ||| | ||||||||||||||||||| |       |||||||||| |||||||||||| ||| ||||||||| ||  ||||||||||| ||||    
T  35877463 tactcccaccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaattatt 35877364  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    | |||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  35877363 ctatgaatctaaaaagtcaactttttcttataataaggaccggagggagtat 35877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 527 - 672
Target Start/End: Complemental strand, 4418246 - 4418101
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||| ||||||       |||||||||| |||||||||||| |||| |||||||||||| | ||||||||| ||||    
T  4418246 tactccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataacaaaatacattaattatt 4418147  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    | |||||   ||||| |||| |||||||||||||||||||||||||    
T  4418146 ctatgaactaaaaaaatcaattgtttcttataataaggaccggagg 4418101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 570 - 669
Target Start/End: Original strand, 52966437 - 52966536
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||   |||||||||| ||||||||||||||||||||||    
T  52966437 gttcattgtataagtgatgtatctagtctatatttataacaagatgcattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccgg 52966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 527 - 666
Target Start/End: Original strand, 52136698 - 52136837
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||| |||| |       |||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  52136698 tactccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttataacaagatacattaattatt 52136797  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggac 666  Q
    | |||||   ||||| |||| |||||||||||||||||||    
T  52136798 ctatgaactaaaaaaatcaattgtttcttataataaggac 52136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 532 - 678
Target Start/End: Original strand, 27587250 - 27587396
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| |||||||||||||||||||||       | || ||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  27587250 cctccggtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttataacgagatacattaattattcaatg 27587349  T
Q  632 aatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||  |||||| | || | |||||||||||||||| |||||| |||||    
T  27587350 aacctaaaaaataaattatttcttataataaggatcggaggtagtat 27587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 569 - 677
Target Start/End: Original strand, 8347533 - 8347641
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||||||||| |||||||||||||||||||||| ||  ||||||||||  ||||| |||||  ||||||||||||| |||||||||||||||||||    
T  8347533 ggttcattgtataaatgatgtatctagtctatatttacaataagatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccg 8347632  T
Q  669 gaggaagta 677  Q
    |||| ||||    
T  8347633 gagggagta 8347641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 569 - 679
Target Start/End: Original strand, 9813497 - 9813607
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||  || |||| ||  ||||||||||| |||| ||||| ||||||| ||    
T  9813497 ggttcattgtgtaagtgatgtatctagtctatatttataacgagatgcattaatcatgcaataaacctaaaaagtcaattgttgcttattataaggatcg 9813596  T
Q  669 gaggaagtatt 679  Q
    |||||||||||    
T  9813597 gaggaagtatt 9813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 584 - 682
Target Start/End: Complemental strand, 24100851 - 24100753
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| || | |||||||||||||||| |||||| |||| ||||    
T  24100851 tgatgtatctagtctatatttataacaagatacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagggagtaatatt 24100753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 542 - 673
Target Start/End: Original strand, 50511259 - 50511390
Alignment:
Q  542 ttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    |||||||||||||||||| |       |||||||||| |||||||||||| ||| ||||||||| ||  ||||||||||| ||||| || ||| |||| |    
T  50511259 ttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaattattctataaatctaaaga 50511358  T
Q  642 gtcaactgtttcttataataaggaccggagga 673  Q
    ||||||| ||||||||||||||||||||||||    
T  50511359 gtcaactttttcttataataaggaccggagga 50511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 569 - 662
Target Start/End: Complemental strand, 31853174 - 31853081
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||  ||||| |||| | |||||||||||||    
T  31853174 ggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaattaaaaaaatcaattatttcttataataa 31853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 525 - 680
Target Start/End: Complemental strand, 35929160 - 35929006
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||| || ||||  ||||||||||||||||||||       |||||||||| ||||||||||||||| |||||||||||||  ||||||||||| ||    
T  35929160 aatactctcttcggtcattattataagaaacaattgatttttt-ggttcattgtgtaagtgatgtatctaatctatatttataataagatacattaatta 35929062  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||| || ||  |||||| |||||| ||||||||||||| ||| ||||||| |||||    
T  35929061 ttctataaacctaaaaaatcaactttttcttataataaagacgggaggaaatatta 35929006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 527 - 671
Target Start/End: Complemental strand, 25874849 - 25874704
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||||||| |||| |       ||||||||||||||||||||||||||||||||||||| ||  | ||||||||| ||||    
T  25874849 tactccctccggtccttattataagaaagaattaatttttttggttcattgtataagtgatgtatctagtctatatttacaataaaatacattaattatt 25874750  T
Q  627 caatgaatgtaaaaagtc-aactgtttcttataataaggaccggag 671  Q
    | |||||| |||||| || |  | ||| ||||||||||||||||||    
T  25874749 ctatgaatctaaaaaatctattttttttttataataaggaccggag 25874704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 525 - 672
Target Start/End: Original strand, 43556688 - 43556836
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||||||||||        |||| |||| ||||||| |||||||||||| ||||| ||  ||||||||||| ||    
T  43556688 aatactccctccggtccttattataagaaacaattgatttttttagttcgttgtgtaagtgacgtatctagtctacatttacaataagatacattaatta 43556787  T
Q  625 ttcaatgaatgtaaaaagtcaa-ctgtttcttataataaggaccggagg 672  Q
    ||| |||||  |||||| ||||  | |||||||||||||||||||||||    
T  43556788 ttctatgaacctaaaaaatcaatttttttcttataataaggaccggagg 43556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 526 - 679
Target Start/End: Original strand, 22019932 - 22020084
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||| |||||| ||||||||||| ||||||| |       | |||||| | |||||||||| |||| ||||||||||||||||||| |||||| |||    
T  22019932 atactccatccggtccttattataagtaacaattaactttttagattcattctgtaagtgatgtgtctaatctatatttataacgagatgcattaattat 22020031  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
      ||| ||| |||||||||||||||| ||||| ||||||| | |||||||||||    
T  22020032 ctaattaatctaaaaagtcaactgttacttat-ataaggatcagaggaagtatt 22020084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 571 - 670
Target Start/End: Complemental strand, 1140970 - 1140871
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||| |||||||||||||| ||||||||||||||| | |||||| || |||||||||||| |||||| |||| ||||| || |||||| |||||||    
T  1140970 ttcattgtgtaagtgatgtatctggtctatatttataacaaaatacatcaattattcaatgaatctaaaaattcaattgtttattctaataatgaccgga 1140871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 574 - 673
Target Start/End: Original strand, 23558952 - 23559051
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagga 673  Q
    ||||| ||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||   |||||| |||| |||| |||||||||| ||||||||||    
T  23558952 attgtgtaactgatgtatctagtctatatttataacgagatatattaattatccaatgagcctaaaaaatcaattgttacttataataaagaccggagga 23559051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 580 - 671
Target Start/End: Complemental strand, 42160069 - 42159978
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||   ||||| |||| | ||||||||||||||||||||||    
T  42160069 taagtgatgtatttagtctatatttataacaagatacattaattattctatgaacaaaaaaaatcaattatttcttataataaggaccggag 42159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 525 - 666
Target Start/End: Complemental strand, 28460897 - 28460756
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||| ||||||||||||||||||||||        | |||||| |||||||||||||| ||||||||||||| ||| ||||| ||||| ||    
T  28460897 aatactccctccgattcttattataagaaacaattggctttttagattcattatataagtgatgtatttagtctatatttacaacaagataaattaatta 28460798  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggac 666  Q
       ||||||| |||||| ||||   |||||||||||| ||||    
T  28460797 cataatgaatctaaaaaatcaaaaatttcttataatagggac 28460756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 668
Target Start/End: Complemental strand, 1205233 - 1205091
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||| |  ||||||||||||| ||||||         |||||||| |||||||||||||||||||||||||||||  ||||||||||| ||    
T  1205233 aatactccctccgatctttattataagaaaaaattgattttttatattcattgtctaagtgatgtatctagtctatatttataataagatacattaatta 1205134  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    ||| | ||||  ||||||| || ||||| ||||||||| |||||    
T  1205133 ttc-acgaatcaaaaaagttaattgttttttataataaagaccg 1205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 618
Target Start/End: Complemental strand, 7086280 - 7086189
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacat 618  Q
    |||||| |||||| |||||||||||||||| ||||       |||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  7086280 tactccttccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctggtctacatttataacgagatacat 7086189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 593 - 662
Target Start/End: Complemental strand, 22210872 - 22210803
Alignment:
Q  593 tagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    ||||||||||||| ||| ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||    
T  22210872 tagtctatatttacaacaagatatattaattattcaatgaatttaaaaagtcaattgtttcttataataa 22210803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 40592755 - 40592811
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattc 627  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  40592755 ttcattgtataagtgatgtatctagtttatatttataacaagatacattaattattc 40592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 572 - 670
Target Start/End: Original strand, 50511471 - 50511569
Alignment:
Q  572 tcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||||||||||| |||||||| ||  ||||||||||| ||||| |||||  |||| |||||||| ||||||||||| | |||||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataagatacattaattattctatgaacctaaagagtcaactttttcttataatgaagaccgga 50511569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 671
Target Start/End: Original strand, 19350609 - 19350753
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||| |||||| |  |||||||||||||||||| |       |||||||||| ||||||| ||||||||||| |||||||||  ||| ||||||| ||    
T  19350609 aatacttcctccgatctttattataagaaacaattaatttttttggttcattgtgtaagtga-gtatctagtctttatttataataaga-acattaagta 19350706  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggag 671  Q
    ||| || ||  ||||||||||||| ||| || |||||||||||||||    
T  19350707 ttctataaacctaaaaagtcaacttttttttttaataaggaccggag 19350753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 526 - 604
Target Start/End: Complemental strand, 38208399 - 38208321
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatattt 604  Q
    |||||||||||||| |||| ||||||||||||||||        ||||||||| |||||||||||||||||||||||||    
T  38208399 atactccctccggtccttaatataagaaacaattgacatttttagttcattgtttaagtgatgtatctagtctatattt 38208321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 680
Target Start/End: Complemental strand, 29686550 - 29686396
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaata 624  Q
    |||||||||||||| ||||||||||||||||||| |         |||||||||||| | |||||| | || ||||  |||| || |||||||| |  ||    
T  29686550 atactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgt-tataaatatagactagatacatcattta 29686452  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
      |||||||  ||||||||||| ||||||||||||||||||||||||| |||||||    
T  29686451 cacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtatta 29686396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 613 - 678
Target Start/End: Original strand, 53225729 - 53225794
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||| |||||||||||| ||||||||||| | ||||||||||  ||||||||||| |||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtat 53225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 599
Target Start/End: Original strand, 1100899 - 1100967
Alignment:
Q  531 ccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtcta 599  Q
    ||||||||| |||||||||||||||| ||||       |||||||||| ||||||||||||||||||||    
T  1100899 ccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctagtcta 1100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 636 - 679
Target Start/End: Complemental strand, 27587286 - 27587243
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
T  27587286 taaaaagtcaattgtttcttataataaggaccggaggaaatatt 27587243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 571 - 682
Target Start/End: Complemental strand, 48361157 - 48361046
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||||||| | |||||||||    || | |||||| || || ||||||||| ||||||||||| | ||||||||||  |||||||||    
T  48361157 ttcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccgga 48361058  T
Q  671 ggaagtattatt 682  Q
    || |||||||||    
T  48361057 gggagtattatt 48361046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 665
Target Start/End: Original strand, 24100887 - 24100941
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    ||||||||||| |||||||||||| |||||||| || | ||||||||||||||||    
T  24100887 agatacattaattattcaatgaatctaaaaagttaattatttcttataataagga 24100941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 665
Target Start/End: Complemental strand, 50225354 - 50225316
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  50225354 caatgaatttaaaaagtcaactgtttcttataataagga 50225316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 662
Target Start/End: Original strand, 52278008 - 52278101
Alignment:
Q  571 ttcattgtataagtgat--gtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||||| ||||||||||  |||| ||||||||||||| ||  ||||| ||||| ||||| || ||| ||||||||||| | |||||||||||||    
T  52278008 ttcattatataagtgatatgtatttagtctatatttacaataagatatattaattattctataaatctaaaaagtcaattttttcttataataa 52278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 672
Target Start/End: Complemental strand, 1100945 - 1100900
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||    
T  1100945 caatgaacctaaaaagtcaaatgtttcttataataaggaccggagg 1100900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 677
Target Start/End: Original strand, 42160081 - 42160122
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  42160081 taaaaagtcaaatgtttcttataataaagaccggaggaagta 42160122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 677
Target Start/End: Complemental strand, 32193514 - 32193474
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  32193514 aaaaagtcaattgtttcttataataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 659
Target Start/End: Original strand, 36132678 - 36132766
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    |||||||||||| |||||||| ||||||||||| |  || |||||||| || || |||||| || | ||||||||| | ||||||||||    
T  36132678 ttcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaagtcaattttttcttataa 36132766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 677
Target Start/End: Complemental strand, 37895294 - 37895254
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  37895294 aaaaaatcaactgtttcttataataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 48195999 - 48196043
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  48195999 aaaaagtcaaatgtttcttataaataggaccggaggaagtattat 48196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 681
Target Start/End: Complemental strand, 4758847 - 4758772
Alignment:
Q  606 taacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    |||| ||||||||  | ||||||||| || ||||||||||||||| |||| |||  ||||||||||| ||||||||    
T  4758847 taactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtattat 4758772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 670
Target Start/End: Original strand, 7086230 - 7086273
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  7086230 caatgaacctaaaaagtcaaatgtttcttataataaggaccgga 7086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 561
Target Start/End: Complemental strand, 25756862 - 25756827
Alignment:
Q  526 atactccctccggttcttattataagaaacaattga 561  Q
    |||||||||||||| |||||||||||||||||||||    
T  25756862 atactccctccggtccttattataagaaacaattga 25756827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 33615878 - 33615929
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||| |||||    
T  33615878 caatgaatctaaaaattcaattgttttttataataaggaccggagggagtat 33615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 680
Target Start/End: Complemental strand, 43556730 - 43556687
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||    
T  43556730 aaaaaatcaattgtttcttataataaggaccggagggagtatta 43556687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 672
Target Start/End: Complemental strand, 50511427 - 50511392
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggagg 672  Q
    |||||||||| |||||||||||||||||||||||||    
T  50511427 aaaaagtcaagtgtttcttataataaggaccggagg 50511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 682
Target Start/End: Complemental strand, 56491137 - 56491066
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||||||||  ||| |||||||  ||||||||||| || | |||||||||||||||||||| ||| |||||    
T  56491137 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtgttatt 56491066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 16412287 - 16412233
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||||| ||||||||||| | ||||||||||  || |||||||||||||    
T  16412287 tattcaatgaatctaaaaagtcaattttttcttataaatagaaccggaggaagta 16412233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 636 - 682
Target Start/End: Original strand, 17316588 - 17316634
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  17316588 taaaaagttaactttttcttataataaggaccggagggagtagtatt 17316634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 637 - 679
Target Start/End: Complemental strand, 33622919 - 33622877
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||||| || ||||||||||||||||||||||||| ||||||    
T  33622919 aaaaagttaattgtttcttataataaggaccggagggagtatt 33622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 579 - 641
Target Start/End: Complemental strand, 36491118 - 36491056
Alignment:
Q  579 ataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaa 641  Q
    |||| |||||||||||||| ||| |   ||| |||||||| ||||||||||||||||||||||    
T  36491118 ataactgatgtatctagtcgataatataaactagatacatcaaatattcaatgaatgtaaaaa 36491056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 677
Target Start/End: Complemental strand, 42670869 - 42670763
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||| ||| | |||||||||   ||||||||||||||| ||  ||||||||  ||||||| |||| ||||||||||  |||| ||||    
T  42670869 ttcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaagttaactttttcttataaataggatcgga 42670770  T
Q  671 ggaagta 677  Q
     ||||||    
T  42670769 agaagta 42670763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 677
Target Start/End: Original strand, 44111828 - 44111894
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| || || ||||||||| ||||||||||||| ||||||||||  | ||||||||| ||||    
T  44111828 agatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataagaccggagggagta 44111894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 20688511 - 20688568
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||| || ||||||||||||||| |||| |||  ||||||||||| |||||||    
T  20688511 tattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggtagtatta 20688568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 677
Target Start/End: Complemental strand, 25756752 - 25756711
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  25756752 taaaaagtcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 676
Target Start/End: Complemental strand, 41116627 - 41116562
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagt 676  Q
    |||||||| || || ||||||||| |||||||| || | ||||||||||  |||||||||||||||    
T  41116627 agatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccggaggaagt 41116562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 659
Target Start/End: Original strand, 43117900 - 43117985
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    |||| |||| |||||||| | ||||||||||   || | |||||| || ||||||||||||||||||| |||| | ||||||||||    
T  43117900 attgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaaaatcaattttttcttataa 43117985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 679
Target Start/End: Complemental strand, 47866098 - 47866033
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||| || |||| ||||||| |||||||| |||| ||||||||||  ||||||||||| ||||||    
T  47866098 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtatt 47866033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 5e-40; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 25795235 - 25795388
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||| |||||||| |||||||||||||||||||||       |||| || || ||||| |||||||||||||||||||||||||| ||||||||| ||    
T  25795235 aatactacctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaatta 25795334  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  25795335 ttcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagtat 25795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 682
Target Start/End: Original strand, 15239705 - 15239846
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| ||||| |||||  |||||    
T  15239705 cttattataagaaacaattgattttgttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaattattctatgaacctaaaa 15239804  T
Q  641 agtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  15239805 agtcaactttttcttataataaggaccggagggagtattatt 15239846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 525 - 679
Target Start/End: Original strand, 28143740 - 28143896
Alignment:
Q  525 aatactccctccggttcttattata--agaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaa 622  Q
    ||||||||| | ||| |||||||||  ||||||||||||       |||||||||| |||||||||||||||||||||||||||||  |||||||||||     
T  28143740 aatactcccactggtccttattatattagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttataataagatacattaat 28143839  T
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||| ||||||    
T  28143840 tattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 28143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 569 - 678
Target Start/End: Complemental strand, 41464821 - 41464712
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| |||| ||||| ||||||||| |||||    
T  41464821 ggttcattgtgtaagtgatgtatctagtctatatttataacgagatacattaattattcaatgaacttaaaaaatcaattgttttttataataaagaccg 41464722  T
Q  669 gaggaagtat 678  Q
    || |||||||    
T  41464721 gatgaagtat 41464712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 527 - 677
Target Start/End: Original strand, 27311576 - 27311726
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||| | |||||||||||||||||||||||       ||||||||||| || |||| ||||||||||||||||||||| |||||| |||| ||||    
T  27311576 tactccctcggattcttattataagaaacaattgactttttaggttcattgtacaaatgatatatctagtctatatttataacaagatacgttaattatt 27311675  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||| ||| |||||| |||| |||||||| | |||||||||||||| ||||    
T  27311676 caataaatctaaaaaatcaattgtttcttgtgataaggaccggagggagta 27311726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 532 - 678
Target Start/End: Original strand, 40534517 - 40534663
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| |||||||||||||||||||||        ||||||||||||| |||||||||||||||||||||| ||  ||||||||||  ||||| |||    
T  40534517 cctccggtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatctagtctatatttacaataagatacattatttattctatg 40534616  T
Q  632 aatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||  ||||||||||||| | ||||||||||||||||||||| |||||    
T  40534617 aacctaaaaagtcaactttatcttataataaggaccggagggagtat 40534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 527 - 680
Target Start/End: Original strand, 36103392 - 36103545
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| |||||||||| |||||||| |        ||||||||| |||||||||||||||| ||||||||| ||  ||||||||||| ||||    
T  36103392 tactccctccggtccttattataataaacaattaacatttttagttcattgtgtaagtgatgtatctagactatatttacaataagatacattaattatt 36103491  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    | |||||  |||||| |||||| ||||||||||||||||||||||| |||||||    
T  36103492 ctatgaacctaaaaaatcaactttttcttataataaggaccggagggagtatta 36103545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 527 - 667
Target Start/End: Complemental strand, 6971719 - 6971579
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    |||| ||||| || |||||||||||||||| ||||       |||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| |||     
T  6971719 tacttcctcctgtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacattaattata 6971620  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    |||| ||| ||||||||||| ||||||||||||||||||||    
T  6971619 caataaatttaaaaagtcaattgtttcttataataaggacc 6971579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 533 - 679
Target Start/End: Complemental strand, 45076485 - 45076339
Alignment:
Q  533 ctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatga 632  Q
    ||||||| |||||||||| ||||||||||       |||||||||| ||||||||||||||||||||||| || ||  | ||||||||| ||||| ||||    
T  45076485 ctccggtccttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatatgtacaataaaatacattaattattctatga 45076386  T
Q  633 atgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |  |||||| |||| | ||||||||||||||||||||||| ||||||    
T  45076385 acctaaaaaatcaattttttcttataataaggaccggagggagtatt 45076339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 569 - 665
Target Start/End: Original strand, 3365316 - 3365412
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||  ||||| |||| | ||||||||||||||||    
T  3365316 ggttcattgtataagtgatgtatctaatctatatttataacaagatatattaattattcaatgaatcaaaaaaatcaattatttcttataataagga 3365412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 574 - 662
Target Start/End: Original strand, 11687521 - 11687609
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||||||||| |||||||||||||||    
T  11687521 attgtgtaagtgatgtatctagtctatatttataacgagttatattaattattcaataaatctaaaaagtcaattgtttcttataataa 11687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 569 - 682
Target Start/End: Original strand, 23464537 - 23464651
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa-agtcaactgtttcttataataaggacc 667  Q
    ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| ||||| |||||  ||||| | |||||| ||||||||||||||||||    
T  23464537 ggttcattgtataagagatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaataatcaactttttcttataataaggacc 23464636  T
Q  668 ggaggaagtattatt 682  Q
    ||  |||||||||||    
T  23464637 gggtgaagtattatt 23464651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 580 - 662
Target Start/End: Original strand, 9373446 - 9373528
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||||||||||| ||||||||||||| ||| |||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  9373446 taagtgatgtatgtagtctatatttacaacaagatacgttaattattcaatgaatttaaaaagtcaattgtttcttataataa 9373528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 525 - 662
Target Start/End: Complemental strand, 27306860 - 27306725
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    |||||||| |||| |  ||||||||||||||||||||       |||| ||||| |||||   |||||||||||||||||| ||  ||||||||||| ||    
T  27306860 aatactccatccgatcattattataagaaacaattgatttttttggtttattgtgtaagtc--gtatctagtctatatttacaataagatacattaatta 27306763  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    |||||||||  ||||||||||||| |||||||||||||    
T  27306762 ttcaatgaacctaaaaagtcaactttttcttataataa 27306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 570 - 679
Target Start/End: Original strand, 38448980 - 38449089
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||||| ||||||||||||||  ||||||||||| || |||| ||| || |||| ||||||  ||||||||||| ||||||||| |||||| |||||    
T  38448980 gttcattgtgtaagtgatgtatctgatctatatttatcacaagatgcatcaattatttaatgaacctaaaaagtcaattgtttcttaaaataagaaccgg 38449079  T
Q  670 aggaagtatt 679  Q
     |||||||||    
T  38449080 tggaagtatt 38449089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 596 - 669
Target Start/End: Complemental strand, 6971576 - 6971503
Alignment:
Q  596 tctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    |||||||||||||| | ||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||||||    
T  6971576 tctatatttataacaatatacattaattatacaataaatttaaaaagtcaattgtttcttataataaggaccgg 6971503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 574 - 662
Target Start/End: Complemental strand, 11724372 - 11724279
Alignment:
Q  574 attgtataagtgatgtatctagtctatatttataacgagatacattaaata-----ttcaatgaatgtaaaaagtcaactgtttcttataataa 662  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||| ||     |||||| ||| ||||||||||| ||||| |||||||||    
T  11724372 attgtgtaagtaatatatctagtctatatttataacgagatacattaattatatttttcaataaatctaaaaagtcaattgttttttataataa 11724279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 571 - 678
Target Start/End: Complemental strand, 12873828 - 12873721
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||| |||| |||||||| ||||||||||| |||| | | ||||||||| || | ||||||| ||||||||||||| |||||||||| ||||| |||    
T  12873828 ttcattgcataaatgatgtatttagtctatattctataccaa-atacattaattacttaatgaatctaaaaagtcaactttttcttataaaaaggatcgg 12873730  T
Q  670 aggaagtat 678  Q
    ||| |||||    
T  12873729 agggagtat 12873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 586 - 678
Target Start/End: Complemental strand, 30761468 - 30761376
Alignment:
Q  586 atgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||| |||||||||||    || ||||| ||||| || ||||||||||||||||||||| ||||||||||||  ||||||||||| |||||    
T  30761468 atgtatttagtctatattctagacaagataaattaattactcaatgaatgtaaaaagtcaaatgtttcttataaataggaccggaggtagtat 30761376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 601 - 665
Target Start/End: Original strand, 44283605 - 44283670
Alignment:
Q  601 atttataacgagatacattaaat-attcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    ||||||||| ||||||||| ||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  44283605 atttataacaagatacatttaattattcaatgaatctaaaaagtcaattatttcttataataagga 44283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 636 - 679
Target Start/End: Complemental strand, 25795278 - 25795235
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  25795278 taaaaagtcaattgtttcttataataaggaccggaggtagtatt 25795235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 571 - 678
Target Start/End: Original strand, 41153154 - 41153261
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||| |||| |||||||| | |||||||||   ||| | |||||| || || ||||||||| ||||||||||||| ||||||||||  |||| ||||    
T  41153154 ttcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggatcgga 41153253  T
Q  671 ggaagtat 678  Q
    || |||||    
T  41153254 gggagtat 41153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 664
Target Start/End: Complemental strand, 4755532 - 4755474
Alignment:
Q  606 taacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagg 664  Q
    |||||||||||||||| |||| ||||||| |||||| | || |||||||||||||||||    
T  4755532 taacgagatacattaattatttaatgaatctaaaaaattaattgtttcttataataagg 4755474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 6971669 - 6971719
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||  ||||||||||| ||||||||||||||||||| ||||||||||    
T  6971669 caatgaacctaaaaagtcaaatgtttcttataataaggacaggaggaagta 6971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 665
Target Start/End: Original strand, 31853180 - 31853275
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaa-tgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||||| |||||||| |||   ||||||||||||||||  ||||||||| ||||||| ||||| |||||| |||| | ||| ||||||||||||    
T  31853180 ggttcattgtgtaagtgatatatt--gtctatatttataacggaatacattaattattcaattgaatctaaaaaatcaattattttttataataagga 31853275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 12962810 - 12962722
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatattt-ataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    ||||||| |||| |||||||| | |||||||||| ||| | || |||||||| || ||||||||| ||||||||||||| ||||||||||    
T  12962810 ttcattgcataaatgatgtatttggtctatattttataccaag-tacattaattactcaatgaatctaaaaagtcaactttttcttataa 12962722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 678
Target Start/End: Original strand, 9152430 - 9152529
Alignment:
Q  579 ataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||| |||||||| | ||||||||||   || |||||||| || || ||||||||| ||||||||||| |||||||| |||  | ||||||||| |||||    
T  9152430 ataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaataagaccggagggagtat 9152529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 678
Target Start/End: Original strand, 10495723 - 10495790
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||||||||||||||| || |||||||| || | || |||||||||  ||||||| |||||||    
T  10495723 agatacattaaatattcaatgtatctaaaaagtgaaattttgcttataatagtgaccggatgaagtat 10495790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 613 - 659
Target Start/End: Original strand, 28249018 - 28249064
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||||||||    
T  28249018 atacattaattatttaatgaatctaaaaagtcaactttttcttataa 28249064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 678
Target Start/End: Original strand, 12486077 - 12486142
Alignment:
Q  613 atacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||| || |||||||||||| ||||||||||| |||||||| |||  |||||| |||| |||||    
T  12486077 atacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagggagtat 12486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 679
Target Start/End: Complemental strand, 45034460 - 45034395
Alignment:
Q  614 tacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    ||||| || |||| ||||||| |||||||| |||| ||||||||||  ||||||||||| ||||||    
T  45034460 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtatt 45034395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 525 - 678
Target Start/End: Original strand, 112820 - 112973
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||| ||| |||||||||||||||||||||       ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||    
T  112820 aatactccctcgggtccttattataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaatta 112919  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||| ||| ||||||||||| ||||||||||  ||||||||||||| |||||    
T  112920 ttcaataaatctaaaaagtcaattgtttcttatgttaaggaccggagggagtat 112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 680
Target Start/End: Complemental strand, 112872 - 112819
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||  ||||| ||||| |||||||||||||||||||| |||| |||||||    
T  112872 caatgaacctaaaacgtcaattgtttcttataataaggacccgagggagtatta 112819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 7e-36; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 530 - 680
Target Start/End: Complemental strand, 15699610 - 15699460
Alignment:
Q  530 tccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaa 629  Q
    ||||||| || ||||||||| |||||||||||       |||| |||||||||||||||||||||||||||||||| ||| ||||||||||| || ||||    
T  15699610 tccctcccgtccttattatatgaaacaattgaatttttaggtttattgtataagtgatgtatctagtctatatttacaacaagatacattaattactcaa 15699511  T
Q  630 tgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||| |||||| ||||  |||||||||||||||||||||||| |||||||    
T  15699510 tgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtatta 15699460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 19998553 - 19998408
Alignment:
Q  534 tccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa 633  Q
    |||||| |||||||||||||||||||||       | |||||||| |||||||||||||||||||||||||| ||| ||||| ||||| || ||||||||    
T  19998553 tccggtccttattataagaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaattactcaatgaa 19998454  T
Q  634 tgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    | |||||||||||  |||||||||||||||||||||||| ||||||    
T  19998453 tataaaaagtcaaaagtttcttataataaggaccggagggagtatt 19998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 51590581 - 51590428
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||||||| |||||||||||||| | ||||       | |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  51590581 aatactccctccggtccttattataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataacaagatacattaatta 51590482  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||| |||||   |||||||||| ||||| ||||||||||||||||||| |||||    
T  51590481 ttctatgaaccaaaaaagtcaattgttttttataataaggaccggagggagtat 51590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 527 - 672
Target Start/End: Original strand, 22182764 - 22182909
Alignment:
Q  527 tactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatatt 626  Q
    ||||||||||||| ||||||||||| |||||||||       | || ||||| |||||||||||||||| | |||||||||||||||| |||||| |||     
T  22182764 tactccctccggtccttattataagtaacaattgactttttagatttattgtgtaagtgatgtatctagcccatatttataacgagatgcattaattatc 22182863  T
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    |||||||  ||||||||||| |||| ||||||||||||||||||||    
T  22182864 caatgaacttaaaaagtcaattgttgcttataataaggaccggagg 22182909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 525 - 683
Target Start/End: Original strand, 52279231 - 52279389
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||| ||| |||||||| |||| |||||||       |||||||||| ||||||||||||| |||||||||||| ||  ||||| ||||| ||    
T  52279231 aatactccctctggtccttattattagaagcaattgatttttttggttcattgtgtaagtgatgtatcaagtctatatttacaataagatatattaatta 52279330  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatta 683  Q
    ||  |||||| ||||||||||||| |||||||||||||||| |||||| |||| |||||    
T  52279331 ttatatgaatctaaaaagtcaactttttcttataataaggatcggagggagtactatta 52279389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 532 - 662
Target Start/End: Original strand, 45977098 - 45977228
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| ||||||||||||||||||| |       |||| |||||||| ||||||||||||||||||||||| ||  ||||||||||| ||||| ||     
T  45977098 cctccggtccttattataagaaacaattaacttttttggtttattgtataggtgatgtatctagtctatatttacaataagatacattaattattctata 45977197  T
Q  632 aatgtaaaaagtcaactgtttcttataataa 662  Q
    || |||||||||||||| |||||||||||||    
T  45977198 aacgtaaaaagtcaactttttcttataataa 45977228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 682
Target Start/End: Complemental strand, 31050385 - 31050244
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||       |||| ||||| |||||||||||| ||||||||||||| ||| | ||||||||| ||  |||||||| |||||    
T  31050385 cttattataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaattacacaatgaatctaaaa 31050286  T
Q  641 agtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||||  ||||||||||||||||||| |||| |||| ||||    
T  31050285 agtcaaaagtttcttataataaggaccagagggagtaatatt 31050244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 524 - 679
Target Start/End: Complemental strand, 18038840 - 18038685
Alignment:
Q  524 caatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaat 623  Q
    |||||||||||||||| |||||||||| ||||| ||||       | |||||||| ||||||||||||||| |||| |||||||||||||||||| |  |    
T  18038840 caatactccctccggtccttattataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacatttataacgagatacatcactt 18038741  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |  |||||||  ||||||||||| | |||||||||||||||||  |||| ||||||    
T  18038740 aagcaatgaacctaaaaagtcaaatatttcttataataaggactagagggagtatt 18038685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 526 - 682
Target Start/End: Original strand, 13320301 - 13320457
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||||||||||||||||||||||| |        ||| ||||| ||| |||||||| ||  ||||||||| ||  ||||| ||||| |||    
T  13320301 atactccctccggttcttattataagaaacaattaattttttttgtttattgtgtaaatgatgtatttaaactatatttacaataagatatattaattat 13320400  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    || |||||| ||||||||||||| ||||||||||||| ||| ||||| || ||||||    
T  13320401 tctatgaatctaaaaagtcaactttttcttataataaagactggagggagcattatt 13320457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 525 - 672
Target Start/End: Complemental strand, 13321865 - 13321718
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaata 624  Q
    ||||||||||| ||| |||||||||||||||| ||||       | |||||| | |||||||||||||||||||||||||||||| ||||||||||| ||    
T  13321865 aatactccctctggtccttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaatta 13321766  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggagg 672  Q
    ||  || ||   ||||||| || |||||||| ||||||||| ||||||    
T  13321765 ttttataaaccaaaaaagttaattgtttcttgtaataaggatcggagg 13321718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 526 - 665
Target Start/End: Original strand, 27687839 - 27687978
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||||||||||||||||||||||||| ||||||        ||||||| | |||||||||||||||||||||||||| ||  ||||||||||| |||    
T  27687839 atactccctccggttcttattataagaaataattgaattttttagttcattatgtaagtgatgtatctagtctatatttacaataagatacattaattat 27687938  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    || || ||  |||||||| || | |||||||||| |||||    
T  27687939 tctataaacttaaaaagttaattttttcttataacaagga 27687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 569 - 663
Target Start/End: Complemental strand, 44224376 - 44224283
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataag 663  Q
    ||||||||||| ||||||||||||||| ||||||||| ||  ||||||||||| ||||| |||||| ||||||||||| | ||| ||||||||||    
T  44224376 ggttcattgtacaagtgatgtatctagactatatttacaataagatacattaattattctatgaatctaaaaagtcaa-ttttttttataataag 44224283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 677
Target Start/End: Complemental strand, 48565677 - 48565526
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| |||||||||||||| | || |        ||||||||| || ||||||||| ||||||||||||||||| |||||| |||| |||    
T  48565677 atactccctccggtccttattataagaaaaagttaactttttaagttcattgtgtaggtgatgtatttagtctatatttataacaagatactttaattat 48565578  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    || |||||   ||||| |||| | ||||||||||||| |||  |||||||||    
T  48565577 tctatgaaccaaaaaaatcaattatttcttataataaagactagaggaagta 48565526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 526 - 644
Target Start/End: Complemental strand, 13770859 - 13770741
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||||||||||||||||||||||||||| || |         || ||||| |||||||||||||||||||||||||| ||  ||||||||||| |||    
T  13770859 atactccctccggttcttattataagaaacagtttacttttttaatttattgtgtaagtgatgtatctagtctatatttacaataagatacattaattat 13770760  T
Q  626 tcaatgaatgtaaaaagtc 644  Q
    || |||||| |||| ||||    
T  13770759 tctatgaatctaaatagtc 13770741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 526 - 667
Target Start/End: Original strand, 34174884 - 34175025
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    ||||||| |||| | |||||||||||||||||||||       |||||||||| |||||||||||| |||| |||||||  ||| ||||||||||| ||     
T  34174884 atactccatccgatccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatttagtttatatttgcaacaagatacattaattac 34174983  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggacc 667  Q
    ||| ||||| |||||| ||||  |||| | ||||||| ||||    
T  34174984 tcattgaatttaaaaaatcaaaagtttttaataataaagacc 34175025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 680
Target Start/End: Complemental strand, 26924364 - 26924209
Alignment:
Q  525 aatactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaat 623  Q
    ||||||||||||||| ||  |||||||||||| ||||       | ||||||| |||| |||||||| | ||||||||| |||| | || ||||||||      
T  26924364 aatactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaag-tacattaatg 26924266  T
Q  624 attcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    | ||||||||| ||||||||||||| ||||||||||  ||||||||||| |||||||    
T  26924265 actcaatgaatttaaaaagtcaactttttcttataaataggaccggagggagtatta 26924209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 681
Target Start/End: Original strand, 51590428 - 51590583
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaata 624  Q
    |||||||||||||| |||||||||| ||||||||||       ||||||| | |||| | |||||||| || ||||  |||| || |||||||| |  ||    
T  51590428 atactccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatcttgt-tataaatatagactagatacatcactta 51590526  T
Q  625 ttcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
      |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  51590527 cacaatgaatctaaaaggtcaactttttcttataataaggaccggagggagtattat 51590583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 679
Target Start/End: Original strand, 50155341 - 50155449
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttata-acgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||| |||| |||||||| | ||||||||| ||| || | |||||| || || ||||||||| ||||||||||||| ||||||||||  ||||||||    
T  50155341 ttcattgcataaatgatgtatttggtctatatt-atagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccgg 50155439  T
Q  670 aggaagtatt 679  Q
    ||||||||||    
T  50155440 aggaagtatt 50155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 593 - 665
Target Start/End: Complemental strand, 2543394 - 2543322
Alignment:
Q  593 tagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    ||||||||||||||||||||||| ||||| |||||||||||  | ||||||||| |||||| ||| |||||||    
T  2543394 tagtctatatttataacgagataaattaattattcaatgaacttgaaaagtcaattgtttcctattataagga 2543322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 570 - 646
Target Start/End: Complemental strand, 29438244 - 29438168
Alignment:
Q  570 gttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaa 646  Q
    ||||||||| |||||||||||||||||||||||||  ||  ||||||||||| ||||| |||||  |||||||||||    
T  29438244 gttcattgtgtaagtgatgtatctagtctatattttcaataagatacattaattattctatgaacctaaaaagtcaa 29438168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 584 - 643
Target Start/End: Original strand, 12175507 - 12175566
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagt 643  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||  ||||||||    
T  12175507 tgatgtatctagtctatatttataacaagatacattaattgttcaatgaacctaaaaagt 12175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 615 - 677
Target Start/End: Original strand, 29256685 - 29256747
Alignment:
Q  615 acattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||| || ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||    
T  29256685 acattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 679
Target Start/End: Original strand, 43851001 - 43851102
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa--tgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    ||||||||||||||| | |||||||||||| ||||| ||||| |||| ||||||  | |||||||| ||  ||||||||||||||||| | |||| ||||    
T  43851001 taagtgatgtatctaatatatatttataacaagatatattaattatttaatgaatctataaaaagtaaaaagtttcttataataaggatcagagggagta 43851100  T
Q  678 tt 679  Q
    ||    
T  43851101 tt 43851102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 679
Target Start/End: Original strand, 18038787 - 18038839
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatt 679  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  18038787 caatgaatctaaaaagtcaaatgttttttataataaggaccggagggagtatt 18038839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 19998510 - 19998561
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||| |||||| |||| ||||||||||||||||||||||| |||||||    
T  19998510 caatgaatctaaaaattcaattgtttcttataataaggaccggatgaagtat 19998561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 611 - 678
Target Start/End: Original strand, 25238656 - 25238723
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||||| ||||| |||||  ||||||||||| ||||| ||||||||||||| ||||| |||||    
T  25238656 agatacattaattattctatgaacctaaaaagtcaattgttttttataataaggacaggagggagtat 25238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 571 - 670
Target Start/End: Complemental strand, 49944938 - 49944839
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgga 670  Q
    |||||||||||| |||||||| | |||||||||    || |||||||| || |||||||||||| |||||||| || | ||||||||||  |||||||||    
T  49944938 ttcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaagttaaatttttcttataaataggaccgga 49944839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 682
Target Start/End: Original strand, 13321814 - 13321868
Alignment:
Q  628 aatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattatt 682  Q
    ||||||| |||||| |||| |||||||||||||||||||| |||| |||||||||    
T  13321814 aatgaatctaaaaaatcaaatgtttcttataataaggaccagagggagtattatt 13321868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 677
Target Start/End: Original strand, 38040359 - 38040425
Alignment:
Q  611 agatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||| || || ||||||||| ||||||||||| | ||||||||||  ||||||||||||||||    
T  38040359 agatacatcaattaatcaatgaatctaaaaagtcaaatttttcttataaataggaccggaggaagta 38040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 26924308 - 26924365
Alignment:
Q  623 tattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    ||||||||||||  |||||||||| ||||||||||||  ||||||||||| |||||||    
T  26924308 tattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtatta 26924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 680
Target Start/End: Original strand, 37179019 - 37179062
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtatta 680  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||    
T  37179019 aaaaagtcaaatgtttcttataattagggccggaggaagtatta 37179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 48565626 - 48565677
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||  |||||||| |||| ||||||||||||||||||||||| |||||    
T  48565626 caatgaacttaaaaagttaactttttcttataataaggaccggagggagtat 48565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 22182814 - 22182764
Alignment:
Q  627 caatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||| ||| ||||||||||| |||| |||||||||||||||||||| ||||    
T  22182814 caataaatctaaaaagtcaattgttacttataataaggaccggagggagta 22182764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 26760216 - 26760325
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatt-tataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccgg 669  Q
    ||||||| |||| |||||||| | ||||||||| |||| | || ||||||||  | ||||||||| |||||| |||| | ||||||||||  ||||||||    
T  26760216 ttcattgaataaatgatgtatttggtctatattctataccaag-tacattaatgactcaatgaatttaaaaaatcaattttttcttataaataggaccgg 26760314  T
Q  670 aggaagtatta 680  Q
    ||| |||||||    
T  26760315 agggagtatta 26760325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 636 - 678
Target Start/End: Complemental strand, 43850989 - 43850947
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    |||||||||||  |||||||||||||| |||||||||||||||    
T  43850989 taaaaagtcaaaagtttcttataataaagaccggaggaagtat 43850947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Original strand, 13770818 - 13770859
Alignment:
Q  637 aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  13770818 aaaaagtaaactgtttcttataataagaaccggagggagtat 13770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 681
Target Start/End: Original strand, 25021315 - 25021384
Alignment:
Q  612 gatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtattat 681  Q
    ||||||| || |||||||| ||| ||||||||||| |||||||| |||  || |||||| ||||||||||    
T  25021315 gatacatcaattattcaataaatctaaaaagtcaattgtttcttgtaaatagaaccggatgaagtattat 25021384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 526 - 678
Target Start/End: Original strand, 26584 - 26736
Alignment:
Q  526 atactccctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatat 625  Q
    |||||||||||||| ||||||||||||||  |||||       |||||||| | |||||||||||||||||||||||||| ||| ||||||||||| ||     
T  26584 atactccctccggtccttattataagaaaggattgactttttaggttcattatgtaagtgatgtatctagtctatatttacaacaagatacattaattac 26683  T
Q  626 tcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    ||||||||| |||||| ||||  |||||||||||||||||||||||| |||||    
T  26684 tcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtat 26736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 532 - 678
Target Start/End: Original strand, 25618 - 25765
Alignment:
Q  532 cctccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatg 631  Q
    |||||||| |||||||||| |||||||| |       |||| ||| |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||    
T  25618 cctccggtccttattataaaaaacaattaacttttttggtttattatataagtgatgtatctagtctatatttataataagatacattaattattctatg 25717  T
Q  632 aatgt-aaaaagtcaactgtttcttataataaggaccggaggaagtat 678  Q
    || || |||||||||||| |||||||||||||||||||||||||||||    
T  25718 aacgtaaaaaagtcaactttttcttataataaggaccggaggaagtat 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 40232 - 40343
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccg 668  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||| ||||| || ||||||||| |||||||||||  ||||||||||||||||||||    
T  40232 ggttcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaattactcaatgaatctaaaaagtcaaaagtttcttataataaggaccg 40331  T
Q  669 gaggaagtatta 680  Q
    |||| |||||||    
T  40332 gagggagtatta 40343  T

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Target: scaffold0533 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 541 - 669
Target Start/End: Original strand, 3253 - 3381
Alignment:
Q  541 cttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaa 640  Q
    |||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||||| ||| ||||||| | |||||||| ||  |||||    
T  3253 cttattataagaaacaattgactttttatgttcattgtgtaagtgatgtatctagtctatatttatatcgaaatacattgattattcaattaacttaaaa 3352  T
Q  641 agtcaactgtttcttataataaggaccgg 669  Q
    ||| || ||||||||||||||||||||||    
T  3353 agttaattgtttcttataataaggaccgg 3381  T

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Target: scaffold0287 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 534 - 667
Target Start/End: Complemental strand, 12888 - 12755
Alignment:
Q  534 tccggttcttattataagaaacaattgannnnnnnggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaa 633  Q
    |||||| |||||||||||||||| ||||       |||||||| | |||||||||||||||||||| |||||||||||||||||| |  ||  |||||||    
T  12888 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacatcacttaaacaatgaa 12789  T
Q  634 tgtaaaaagtcaactgtttcttataataaggacc 667  Q
      ||||||||||| | ||||||||||||||||||    
T  12788 cctaaaaagtcaaatatttcttataataaggacc 12755  T

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Target: scaffold0287; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 636 - 670
Target Start/End: Original strand, 12854 - 12888
Alignment:
Q  636 taaaaagtcaactgtttcttataataaggaccgga 670  Q
    ||||||||||| |||||||||||||||||||||||    
T  12854 taaaaagtcaaatgtttcttataataaggaccgga 12888  T

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Target: scaffold0015 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 677
Target Start/End: Complemental strand, 17483 - 17384
Alignment:
Q  578 tataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggaccggaggaagta 677  Q
    |||||||||||| |||||||||||||||  || ||||||||||| || ||||||||| |||||| ||||  |||||||||||||| ||||||||| ||||    
T  17483 tataagtgatgtgtctagtctatatttactacaagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaagaccggagggagta 17384  T

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Target: scaffold0027 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 571 - 663
Target Start/End: Original strand, 5457 - 5549
Alignment:
Q  571 ttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataag 663  Q
    |||||||| ||||||| ||||| ||||||||||||| ||   ||||||||| |||||||||||| ||||||||||| | ||||||||||||||    
T  5457 ttcattgtgtaagtgaagtatcgagtctatatttattacagtatacattaattattcaatgaatctaaaaagtcaattatttcttataataag 5549  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 580 - 665
Target Start/End: Complemental strand, 19390 - 19308
Alignment:
Q  580 taagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataagga 665  Q
    |||||||||||  ||||||||||||| ||  ||||| |||||   ||| |||||| ||||||||||||| ||||||||||||||||    
T  19390 taagtgatgtaagtagtctatatttacaataagatatattaa---ttctatgaatctaaaaagtcaactttttcttataataagga 19308  T

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Target: scaffold0474 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 659
Target Start/End: Complemental strand, 11842 - 11767
Alignment:
Q  584 tgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataa 659  Q
    ||||||||||||| ||||| |||||| ||||| ||||| ||||||||  || || ||| |||| ||||||||||||    
T  11842 tgatgtatctagtttatatatataacaagatatattaattattcaatttatctacaaaatcaattgtttcttataa 11767  T

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Target: scaffold0460 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 666
Target Start/End: Complemental strand, 12320 - 12223
Alignment:
Q  569 ggttcattgtataagtgatgtatctagtctatatttataacgagatacattaaatattcaatgaatgtaaaaagtcaactgtttcttataataaggac 666  Q
    |||| ||||| | |||||||||||||| ||||||||| ||  |||||| |||| ||| |||| ||| ||||||  |||   |||||||||||||||||    
T  12320 ggtttattgtgttagtgatgtatctagcctatatttacaagaagatacgttaattatacaataaatctaaaaaaacaataatttcttataataaggac 12223  T

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