View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5786_high_52 (Length: 227)
Name: NF5786_high_52
Description: NF5786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5786_high_52 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 32038182 - 32038257
Alignment:
| Q |
149 |
attttaaacatgtaacaaagttaaaaaatatgtgacctttttagagaaatacacttcaatatcaatcatgcaaaccaac |
227 |
Q |
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| T |
32038182 |
attttagacatgtaacaaagttaaa---tatgtgacctttttagagaaatacacttcaatatcaatcatgcaaaccaac |
32038257 |
T |
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