View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5786_low_24 (Length: 340)

Name: NF5786_low_24
Description: NF5786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5786_low_24
NF5786_low_24
[»] chr3 (54 HSPs)
chr3 (15-257)||(49086599-49086840)
chr3 (15-257)||(49356658-49356898)
chr3 (133-257)||(33795023-33795147)
chr3 (194-246)||(46572503-46572555)
chr3 (302-340)||(49086518-49086556)
chr3 (193-246)||(15493324-15493377)
chr3 (301-340)||(25450133-25450172)
chr3 (302-340)||(5844672-5844710)
chr3 (302-340)||(17469798-17469836)
chr3 (206-244)||(26549830-26549868)
chr3 (302-340)||(30688555-30688593)
chr3 (302-340)||(42602252-42602290)
chr3 (302-340)||(47147655-47147693)
chr3 (302-340)||(50034674-50034712)
chr3 (303-340)||(28410776-28410813)
chr3 (303-340)||(35852893-35852930)
chr3 (303-340)||(43022985-43023022)
chr3 (303-340)||(46572610-46572647)
chr3 (303-340)||(49146972-49147009)
chr3 (209-246)||(49406895-49406932)
chr3 (177-246)||(53722968-53723037)
chr3 (210-246)||(47700499-47700535)
chr3 (303-338)||(15493431-15493466)
chr3 (301-340)||(25787408-25787447)
chr3 (301-340)||(25829365-25829404)
chr3 (301-340)||(33934895-33934934)
chr3 (301-340)||(42598063-42598102)
chr3 (302-340)||(4873807-4873845)
chr3 (302-340)||(6044982-6045020)
chr3 (194-244)||(7520699-7520749)
chr3 (302-340)||(26162189-26162227)
chr3 (302-340)||(30415111-30415149)
chr3 (302-340)||(32120088-32120126)
chr3 (302-340)||(33751695-33751733)
chr3 (302-340)||(37182718-37182756)
chr3 (302-340)||(37410138-37410176)
chr3 (302-340)||(38571797-38571835)
chr3 (302-340)||(41183653-41183691)
chr3 (302-340)||(44084691-44084729)
chr3 (302-340)||(49356939-49356977)
chr3 (302-340)||(50020377-50020415)
chr3 (302-340)||(50734398-50734436)
chr3 (302-340)||(50778419-50778457)
chr3 (302-340)||(51998890-51998928)
chr3 (302-340)||(55027145-55027183)
chr3 (146-246)||(55027233-55027332)
chr3 (302-339)||(7520781-7520818)
chr3 (303-340)||(26549895-26549932)
chr3 (303-340)||(49710155-49710192)
chr3 (303-340)||(53722874-53722911)
chr3 (178-246)||(7008586-7008654)
chr3 (194-246)||(26162089-26162141)
chr3 (194-246)||(35471868-35471920)
chr3 (194-246)||(51974718-51974770)
[»] chr7 (28 HSPs)
chr7 (15-257)||(33379745-33379986)
chr7 (302-340)||(25217942-25217980)
chr7 (301-340)||(42881986-42882025)
chr7 (302-340)||(5813660-5813698)
chr7 (302-340)||(33379667-33379705)
chr7 (302-340)||(35028472-35028510)
chr7 (302-340)||(37888762-37888800)
chr7 (303-340)||(43570795-43570832)
chr7 (302-340)||(24793818-24793856)
chr7 (302-340)||(26815506-26815544)
chr7 (302-340)||(28317733-28317771)
chr7 (302-340)||(30630287-30630325)
chr7 (302-340)||(33508254-33508292)
chr7 (302-340)||(37888221-37888259)
chr7 (302-340)||(38970432-38970470)
chr7 (302-340)||(40300585-40300623)
chr7 (302-340)||(48985265-48985303)
chr7 (303-336)||(25038245-25038278)
chr7 (177-246)||(38352084-38352153)
chr7 (209-246)||(38970516-38970553)
chr7 (209-246)||(43201498-43201535)
chr7 (196-245)||(48985362-48985411)
chr7 (206-246)||(20354727-20354767)
chr7 (194-246)||(26815598-26815650)
chr7 (194-246)||(32749417-32749469)
chr7 (194-246)||(37889341-37889393)
chr7 (194-246)||(37952251-37952303)
chr7 (194-246)||(40690803-40690855)
[»] chr4 (43 HSPs)
chr4 (15-252)||(36658906-36659146)
chr4 (166-246)||(39048584-39048664)
chr4 (302-340)||(36658824-36658862)
chr4 (303-340)||(21047596-21047633)
chr4 (303-338)||(39532831-39532866)
chr4 (302-340)||(2211996-2212034)
chr4 (302-340)||(40596414-40596452)
chr4 (302-340)||(46914190-46914228)
chr4 (196-245)||(31848345-31848394)
chr4 (303-340)||(32463682-32463719)
chr4 (303-340)||(55408218-55408255)
chr4 (303-339)||(55598-55634)
chr4 (97-246)||(56054718-56054866)
chr4 (301-340)||(47749727-47749766)
chr4 (302-340)||(3529908-3529946)
chr4 (302-340)||(3614899-3614937)
chr4 (302-340)||(7401562-7401600)
chr4 (302-340)||(8995137-8995175)
chr4 (302-336)||(12159129-12159163)
chr4 (302-340)||(13113914-13113952)
chr4 (302-340)||(16021223-16021261)
chr4 (302-340)||(16171542-16171580)
chr4 (302-340)||(19409864-19409902)
chr4 (302-340)||(21654502-21654540)
chr4 (302-340)||(28901500-28901538)
chr4 (302-340)||(31336182-31336220)
chr4 (302-340)||(31848453-31848491)
chr4 (302-340)||(48506245-48506283)
chr4 (302-340)||(56054631-56054669)
chr4 (303-336)||(33527082-33527115)
chr4 (303-340)||(38173923-38173960)
chr4 (303-336)||(39048704-39048737)
chr4 (205-246)||(39113334-39113375)
chr4 (303-340)||(39113432-39113469)
chr4 (177-246)||(39532715-39532784)
chr4 (194-242)||(55501-55549)
chr4 (302-338)||(10090138-10090174)
chr4 (194-246)||(16171445-16171497)
chr4 (178-246)||(31336069-31336137)
chr4 (304-340)||(36564145-36564181)
chr4 (178-246)||(48506127-48506195)
chr4 (206-246)||(53347255-53347295)
chr4 (304-340)||(54356575-54356611)
[»] chr8 (34 HSPs)
chr8 (15-257)||(26414668-26414909)
chr8 (15-257)||(5736482-5736723)
chr8 (15-257)||(34954701-34954942)
chr8 (173-246)||(17494102-17494174)
chr8 (301-340)||(4625176-4625215)
chr8 (302-340)||(5736404-5736442)
chr8 (302-340)||(8449686-8449724)
chr8 (302-340)||(18028996-18029034)
chr8 (302-340)||(26631805-26631843)
chr8 (302-340)||(26748611-26748649)
chr8 (302-340)||(30470471-30470509)
chr8 (302-340)||(34954985-34955023)
chr8 (302-340)||(43617879-43617917)
chr8 (177-246)||(231831-231900)
chr8 (177-246)||(708242-708311)
chr8 (177-246)||(745454-745523)
chr8 (177-246)||(869349-869418)
chr8 (303-340)||(8607924-8607961)
chr8 (190-246)||(35932332-35932388)
chr8 (301-340)||(42861079-42861118)
chr8 (302-340)||(12272111-12272149)
chr8 (302-340)||(13817433-13817471)
chr8 (302-340)||(31129102-31129140)
chr8 (302-340)||(35101778-35101816)
chr8 (302-340)||(36912950-36912988)
chr8 (302-340)||(42860306-42860344)
chr8 (302-340)||(45100674-45100712)
chr8 (196-245)||(13817520-13817569)
chr8 (177-246)||(23550218-23550287)
chr8 (303-340)||(30289415-30289452)
chr8 (209-246)||(31129017-31129054)
chr8 (303-340)||(39810709-39810746)
chr8 (196-245)||(42861175-42861224)
chr8 (194-246)||(29732157-29732209)
[»] chr1 (38 HSPs)
chr1 (15-257)||(44450629-44450870)
chr1 (15-257)||(44651539-44651780)
chr1 (177-257)||(8465030-8465110)
chr1 (194-246)||(3754597-3754649)
chr1 (177-246)||(39149608-39149676)
chr1 (302-340)||(8464949-8464987)
chr1 (302-340)||(27629992-27630030)
chr1 (302-340)||(31471570-31471608)
chr1 (302-340)||(37419876-37419914)
chr1 (196-245)||(643395-643444)
chr1 (303-340)||(3754708-3754745)
chr1 (177-246)||(36303568-36303637)
chr1 (303-340)||(44334661-44334698)
chr1 (177-246)||(48729906-48729975)
chr1 (302-338)||(37646089-37646125)
chr1 (302-338)||(44450917-44450953)
chr1 (302-338)||(44651459-44651495)
chr1 (301-340)||(45242434-45242473)
chr1 (302-340)||(643502-643540)
chr1 (302-340)||(2474774-2474812)
chr1 (302-340)||(8471595-8471633)
chr1 (302-340)||(10265684-10265722)
chr1 (302-340)||(17675995-17676033)
chr1 (302-340)||(17786628-17786666)
chr1 (302-340)||(19578562-19578600)
chr1 (302-340)||(37690946-37690984)
chr1 (302-340)||(45623181-45623219)
chr1 (302-340)||(51156335-51156373)
chr1 (302-340)||(51494124-51494162)
chr1 (302-340)||(52930344-52930382)
chr1 (210-243)||(20584379-20584412)
chr1 (303-340)||(20584473-20584510)
chr1 (209-246)||(36231392-36231429)
chr1 (209-246)||(45363949-45363986)
chr1 (303-340)||(48927258-48927295)
chr1 (206-246)||(8471684-8471724)
chr1 (178-246)||(10265503-10265571)
chr1 (206-246)||(43739499-43739539)
[»] chr2 (34 HSPs)
chr2 (125-242)||(2778630-2778747)
chr2 (15-257)||(16333769-16334010)
chr2 (15-257)||(16125615-16125856)
chr2 (21-102)||(2778552-2778632)
chr2 (304-340)||(6332951-6332987)
chr2 (301-340)||(1987526-1987565)
chr2 (302-340)||(926502-926540)
chr2 (302-340)||(4296303-4296341)
chr2 (302-340)||(8855381-8855419)
chr2 (302-340)||(36855056-36855094)
chr2 (209-246)||(13151175-13151212)
chr2 (209-246)||(14151823-14151860)
chr2 (303-340)||(43494918-43494955)
chr2 (302-338)||(31184938-31184974)
chr2 (301-340)||(9072620-9072659)
chr2 (301-340)||(12858273-12858312)
chr2 (301-340)||(14383353-14383392)
chr2 (301-340)||(30819317-30819356)
chr2 (302-340)||(1072712-1072750)
chr2 (302-340)||(7585184-7585222)
chr2 (302-340)||(9118208-9118246)
chr2 (146-246)||(9118296-9118395)
chr2 (302-340)||(22349552-22349590)
chr2 (302-340)||(36527204-36527242)
chr2 (302-340)||(37246036-37246074)
chr2 (302-340)||(39432412-39432450)
chr2 (302-340)||(43022076-43022114)
chr2 (302-340)||(44280500-44280538)
chr2 (302-339)||(2778797-2778834)
chr2 (206-246)||(1308241-1308281)
chr2 (206-246)||(7762750-7762790)
chr2 (206-246)||(17486269-17486309)
chr2 (302-338)||(31204664-31204700)
chr2 (206-246)||(39490600-39490640)
[»] chr5 (39 HSPs)
chr5 (194-244)||(37882044-37882094)
chr5 (205-246)||(34528970-34529011)
chr5 (194-246)||(8680866-8680918)
chr5 (206-246)||(14279297-14279337)
chr5 (302-340)||(25033570-25033608)
chr5 (302-340)||(25653206-25653244)
chr5 (210-255)||(25653282-25653328)
chr5 (302-340)||(41152527-41152565)
chr5 (303-340)||(2300200-2300237)
chr5 (177-246)||(9958157-9958226)
chr5 (303-340)||(14279217-14279254)
chr5 (303-340)||(34529066-34529103)
chr5 (302-338)||(7827497-7827533)
chr5 (194-246)||(27407318-27407370)
chr5 (301-340)||(3455210-3455249)
chr5 (301-340)||(4580391-4580430)
chr5 (208-243)||(4938558-4938593)
chr5 (301-340)||(27946003-27946042)
chr5 (301-340)||(31011729-31011768)
chr5 (302-340)||(8176020-8176058)
chr5 (194-244)||(11958390-11958440)
chr5 (302-340)||(13592565-13592603)
chr5 (204-246)||(15973063-15973105)
chr5 (302-340)||(21368636-21368674)
chr5 (302-340)||(31008053-31008091)
chr5 (302-340)||(32973038-32973076)
chr5 (302-340)||(36572052-36572090)
chr5 (302-340)||(40892174-40892212)
chr5 (303-340)||(12913233-12913270)
chr5 (303-340)||(15972968-15973005)
chr5 (205-246)||(27595197-27595238)
chr5 (177-246)||(34917921-34917990)
chr5 (303-340)||(37882130-37882167)
chr5 (206-246)||(4218982-4219022)
chr5 (210-246)||(12913316-12913352)
chr5 (302-338)||(19241692-19241728)
chr5 (206-246)||(30644603-30644643)
chr5 (190-246)||(42318361-42318417)
chr5 (206-246)||(42804351-42804391)
[»] chr6 (15 HSPs)
chr6 (303-340)||(7541325-7541362)
chr6 (177-257)||(32360205-32360286)
chr6 (302-340)||(198209-198247)
chr6 (302-340)||(2503727-2503765)
chr6 (302-340)||(34328782-34328820)
chr6 (303-340)||(6725324-6725361)
chr6 (301-340)||(635064-635103)
chr6 (301-340)||(6377130-6377169)
chr6 (301-340)||(17957998-17958037)
chr6 (302-340)||(8668818-8668856)
chr6 (302-340)||(10886622-10886660)
chr6 (302-340)||(34841859-34841897)
chr6 (303-340)||(34242790-34242827)
chr6 (206-246)||(8222582-8222622)
chr6 (206-246)||(30446733-30446773)
[»] scaffold0758 (1 HSPs)
scaffold0758 (302-340)||(6370-6408)
[»] scaffold0015 (1 HSPs)
scaffold0015 (166-246)||(83434-83514)
[»] scaffold0004 (1 HSPs)
scaffold0004 (166-246)||(106306-106386)
[»] scaffold0021 (1 HSPs)
scaffold0021 (302-340)||(109868-109906)
[»] scaffold1905 (2 HSPs)
scaffold1905 (177-246)||(964-1033)
scaffold1905 (302-338)||(313-349)
[»] scaffold1183 (2 HSPs)
scaffold1183 (303-340)||(27-64)
scaffold1183 (209-246)||(121-158)
[»] scaffold0012 (1 HSPs)
scaffold0012 (303-339)||(124422-124458)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 49086840 - 49086599
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  49086840 aggagggaagtgttgaacacattcaacattgtttaaccggctgccacagggacacgcg-gaagccaacatttagccaagcatggcgcgtgcgcaacacac 49086742  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||    
T  49086741 gtcgacaggtgcgagtgagctgcaggagaggcggagagagaagattgcatatggataatgagtgacacgtagctgattgtgattgattgtctgaattttt 49086642  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49086641 atcatcttaataatttcaactcaattatttcactcgaaattaa 49086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 49356658 - 49356898
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||| |||||||||||||||||||||||||||  | |||||| |||||| ||||||| |||||   | ||| ||||||||||||||||||||||||  |    
T  49356658 aggagagaagtgttgaacacattcaacattgttgtaccggctggcacagggacacgcg-gaagcttgctgtttgccaagcatggcgcgtgcgcaacaagc 49356756  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggat-gacacgtggctgattgtgattggttgtctgaatttt 213  Q
    ||||||||| ||||||| | | |||||||  || |||||||| | |   | |||||||||| | || |||||||||||| ||||||| |||||| |||||    
T  49356757 gccgacaggcgcgagtggggt-caggagaa-cgaagagagaagaatctttgtggataatgggttgatacgtggctgattctgattggctgtctggatttt 49356854  T
Q  214 tatcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49356855 tatcatcttaataatttcaactcaattatttcactcgaaattaa 49356898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 33795023 - 33795147
Alignment:
Q  133 gctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttca 232  Q
    |||| ||||||||||||||||||| ||    |||||||||||| ||||||||| |||||| ||||||| |||  | ||||||||||||||||||||||||    
T  33795023 gctgtaggagaggcggagagagaatatgctttatggataatgggtgacacgtgactgattctgattggctgttcggatttttatcatcttaataatttca 33795122  T
Q  233 actcaattatttcactcgaaattaa 257  Q
    || ||||||||||||||||||||||    
T  33795123 acccaattatttcactcgaaattaa 33795147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 46572503 - 46572555
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  46572503 tgattggttgcctgaatttttgtcatcttaataatttgaactcaattatttca 46572555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 49086556 - 49086518
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49086556 ctctataaatagagatttggttcatttgatttggacaca 49086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 15493324 - 15493377
Alignment:
Q  193 gtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||| ||||| |||||||||||| |||||||||| |||||||||||||||    
T  15493324 gtgattggctgtctaaatttttatcattttaataatttgaactcaattatttca 15493377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 25450133 - 25450172
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25450133 cctctataaatagagacttggttcatttgatttggacaca 25450172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 5844672 - 5844710
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5844672 ctctataaatagagacttggttcatttgatttggacaca 5844710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 17469836 - 17469798
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17469836 ctctataaatagagacttggttcatttgatttggacaca 17469798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 26549830 - 26549868
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattattt 244  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26549830 tgaatttttatcatcttaataatttgaactcaattattt 26549868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 30688555 - 30688593
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30688555 ctctataaatagagatttgattcatttgatttggacaca 30688593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 42602290 - 42602252
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  42602290 ctctataaatagagacttggttcatttgatttggacaca 42602252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 47147693 - 47147655
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  47147693 ctctataaatagagacttggttcatttgatttggacaca 47147655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 50034712 - 50034674
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  50034712 ctctataaatagagacttggttcatttgatttggacaca 50034674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 28410813 - 28410776
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28410813 tctataaatagagacttggttcatttgatttggacaca 28410776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 35852893 - 35852930
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  35852893 tctataaatagagacttggttcatttgatttggacaca 35852930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 43023022 - 43022985
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  43023022 tctataaatagagacttggttcatttgatttggacaca 43022985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 46572610 - 46572647
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  46572610 tctataaatagagacttggttcatttgatttggacaca 46572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 49146972 - 49147009
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49146972 tctataaatagagaattggttcatttgatttggacaca 49147009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 49406895 - 49406932
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||| |||||||||||||||    
T  49406895 atttttatcatcttaataatttgaactcaattatttca 49406932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 53723037 - 53722968
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| |||||||   ||||||||||| || |||| | ||||||||||||||| |||||||||||||||    
T  53723037 tgacacatggctgaacttgattggttgtttggatttatctcatcttaataatttgaactcaattatttca 53722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 47700499 - 47700535
Alignment:
Q  210 tttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||||||||||||||    
T  47700499 tttttatcatcttaataatttaaactcaattatttca 47700535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 15493431 - 15493466
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggaca 338  Q
    |||||||||||||| |||||||||||||||||||||    
T  15493431 tctataaatagagacttggttcatttgatttggaca 15493466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 25787408 - 25787447
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  25787408 cctctataaatagagacttggatcatttgatttggacaca 25787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 25829365 - 25829404
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  25829365 cctctataaatagagacttggatcatttgatttggacaca 25829404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 33934895 - 33934934
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  33934895 cctctataaatagagacttggatcatttgatttggacaca 33934934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 42598063 - 42598102
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  42598063 cctctataaatagagacttggatcatttgatttggacaca 42598102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 4873807 - 4873845
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  4873807 ctctataaatagagacttggatcatttgatttggacaca 4873845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 6044982 - 6045020
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  6044982 ctctataaatagagacttggatcatttgatttggacaca 6045020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 7520699 - 7520749
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattattt 244  Q
    ||||||| ||| || |||||||||| ||||||||||| |||||||||||||    
T  7520699 tgattgggtgtttggatttttatcaacttaataatttaaactcaattattt 7520749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 26162189 - 26162227
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  26162189 ctctataaatagagacttggatcatttgatttggacaca 26162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 30415111 - 30415149
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  30415111 ctctataaatagagacttggatcatttgatttggacaca 30415149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 32120088 - 32120126
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32120088 ctctataaatagagacttggatcatttgatttggacaca 32120126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 33751733 - 33751695
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  33751733 ctctataaatagagacttggttcatttgatttgggcaca 33751695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 37182718 - 37182756
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  37182718 ctctataaatagagacttggatcatttgatttggacaca 37182756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 37410138 - 37410176
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  37410138 ctctataaatagagacttggttcatttaatttggacaca 37410176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 38571797 - 38571835
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  38571797 ctctataaatagagacttggatcatttgatttggacaca 38571835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 41183691 - 41183653
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  41183691 ctctataaatagagacttggatcatttgatttggacaca 41183653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 44084729 - 44084691
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  44084729 ctctataaatagagacttggatcatttgatttggacaca 44084691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 49356939 - 49356977
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  49356939 ctctttaaatagagacttggttcatttgatttggacaca 49356977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 50020415 - 50020377
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  50020415 ctctataaatagagacttggttcatttgatttgaacaca 50020377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 50734436 - 50734398
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  50734436 ctctataaatagagacttggatcatttgatttggacaca 50734398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 50778419 - 50778457
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  50778419 ctctataaatagagacttggatcatttgatttggacaca 50778457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 51998890 - 51998928
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  51998890 ctctataaatagagacttggatcatttgatttggacaca 51998928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 55027183 - 55027145
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  55027183 ctctataaatagagacttggatcatttgatttggacaca 55027145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 55027332 - 55027233
Alignment:
Q  146 cggagagagaaaattgcatatggataatg-gatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattattt 244  Q
    |||||||||||||||  | |||||||| | || |||||||| ||||||  |||||| ||  || |||||||||||||||||| |||  ||||||||||||    
T  55027332 cggagagagaaaatt--aaatggataaagtgaggacacgtgtctgatttcgattggctgcttggatttttatcatcttaatattttagactcaattattt 55027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 7520781 - 7520818
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacac 339  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  7520781 ctctataaatagagacttggtttatttgatttggacac 7520818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 26549895 - 26549932
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  26549895 tctataaataaagacttggttcatttgatttggacaca 26549932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 49710155 - 49710192
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  49710155 tctataaatagagacttggttcatttgattttgacaca 49710192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 53722911 - 53722874
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| || ||||||||||||||||||||    
T  53722911 tctataaatagagactttgttcatttgatttggacaca 53722874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 7008654 - 7008586
Alignment:
Q  178 gacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||  | ||||||| ||  || |||||||||||||||||| |||  ||||||||||||||    
T  7008654 gacacgtggctgggtttgattggctgcttggatttttatcatcttaatattttggactcaattatttca 7008586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 26162089 - 26162141
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||| ||  ||||||||| ||||||||||||  ||||||||||||||    
T  26162089 tgattggttggcttgatttttatcttcttaataatttggactcaattatttca 26162141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 35471868 - 35471920
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  35471868 tgattggctggctggatttttatcttcttaataatttggactcaattatttca 35471920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 51974770 - 51974718
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || |||||||| | |||| |||||||||| |||||||||||||||    
T  51974770 tgattggctgcctgaatttatttcattttaataatttgaactcaattatttca 51974718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 33379986 - 33379745
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||| |||| || |||||||||||| |||||||||||| |    
T  33379986 aggagggaagtgttgaacacattcaacattgtttaaccgactgccacagggacacgcg-gaagcaaacaattggccaagcatggctcgtgcgcaacacgc 33379888  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  33379887 gccgacaggcgcgagtgagctgcaggagaggcggagagacaagattgcatatggataatggatgaaacgtggcagattgtgattggttgtctggattttt 33379788  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33379787 atcatcttaataatttcaactcaattatttcactcgaaattaa 33379745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 25217942 - 25217980
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25217942 ctctataaatagagatttggttcatttgatttggacaca 25217980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 42882025 - 42881986
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  42882025 cctctataaatagagatttggatcatttgatttggacaca 42881986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 5813698 - 5813660
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5813698 ctctataaatagagacttggttcatttgatttggacaca 5813660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 33379705 - 33379667
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33379705 ctctataaatagagacttggttcatttgatttggacaca 33379667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 35028472 - 35028510
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35028472 ctctataaatagagacttggttcatttgatttggacaca 35028510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 37888800 - 37888762
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37888800 ctctataaatagagacttggttcatttgatttggacaca 37888762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 43570795 - 43570832
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  43570795 tctataaatagagacttggttcatttgatttggacaca 43570832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 24793856 - 24793818
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  24793856 ctctataaatagagacttggttcgtttgatttggacaca 24793818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 26815544 - 26815506
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  26815544 ctctataaatagagacttggatcatttgatttggacaca 26815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 28317733 - 28317771
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  28317733 ctctataaatagagacttggatcatttgatttggacaca 28317771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 30630287 - 30630325
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  30630287 ctctataaatagagacttggatcatttgatttggacaca 30630325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 33508254 - 33508292
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  33508254 ctctataaatagagacttggatcatttgatttggacaca 33508292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 37888259 - 37888221
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  37888259 ctctataaatagagatttagatcatttgatttggacaca 37888221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 38970470 - 38970432
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  38970470 ctctataaatagagacttggatcatttgatttggacaca 38970432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 40300585 - 40300623
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  40300585 ctctataaatagagacttggatcatttgatttggacaca 40300623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 48985303 - 48985265
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  48985303 ctctataaatagagacttggatcatttgatttggacaca 48985265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 25038245 - 25038278
Alignment:
Q  303 tctataaatagagatttggttcatttgatttgga 336  Q
    |||||||||||||| |||||||||||||||||||    
T  25038245 tctataaatagagacttggttcatttgatttgga 25038278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 38352153 - 38352084
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||  ||  |||||| ||  |||||||||||| ||||||||||||  ||||||||||||||    
T  38352153 tgacacgtggcttgttacgattggctgcttgaatttttatcttcttaataatttggactcaattatttca 38352084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 38970553 - 38970516
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  38970553 atttttatcatcttaataatttgaactaaattatttca 38970516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 43201498 - 43201535
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  43201498 atttttctcatcttaataatttgaactcaattatttca 43201535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 48985411 - 48985362
Alignment:
Q  196 attggttgtctgaatttttatcatcttaataatttcaactcaattatttc 245  Q
    |||||||||  ||||||||||||| |||||||||| | ||||||||||||    
T  48985411 attggttgttcgaatttttatcattttaataatttgacctcaattatttc 48985362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 20354767 - 20354727
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  20354767 tgaatttttatcttcttaataatttggactcaattatttca 20354727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 26815650 - 26815598
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  26815650 tgattggctggctggatttttatcttcttaataatttggactcaattatttca 26815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 32749469 - 32749417
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  32749469 tgattggctgactggatttttatcttcttaataatttggactcaattatttca 32749417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 37889393 - 37889341
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||| ||| ||||||| |||||||||  | |||||||||||||    
T  37889393 tgattggttgtctggattcttatcattttaataattggacctcaattatttca 37889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 37952303 - 37952251
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  37952303 tgattggctggctggatttttatcttcttaataatttggactcaattatttca 37952251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 40690855 - 40690803
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  40690855 tgattggctggctggatttttatcttcttaataatttggactcaattatttca 40690803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 8e-86; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 36659146 - 36658906
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |    
T  36659146 aggagggaagtgttgaacacattcaacattgtttaaccggctaccacagggacacgcg-gaagccaacagttggccaagcatggcgcgtgcgcaacacgc 36659048  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaa----aattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaat 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||     ||||  | ||||||||||||||||||||||||||||||||||| |||||| ||    
T  36659047 gccgacaggcgcgagtgagctgcaggagaggcggagagagaagattgattgtttgtggataatggatgacacgtggctgattgtgattggctgtctggat 36658948  T
Q  211 ttttatcatcttaataatttcaactcaattatttcactcgaa 252  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  36658947 ttttatcatcttaataatttctactcaatcatttcactcgaa 36658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 39048584 - 39048664
Alignment:
Q  166 tggataatggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||| |||||||||||||||| ||||||| | ||||||||||| || | |||||||||| |||||||||||||||    
T  39048584 tggataatgggtgacacgtggctgattctgattggctttctgaatttttctctttttaataatttgaactcaattatttca 39048664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 36658862 - 36658824
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36658862 ctctataaatagagatttggttcatttgatttggacaca 36658824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 21047596 - 21047633
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21047596 tctataaatagagatttggttcatttgatttggacaca 21047633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 39532831 - 39532866
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||||||||||||||||||||||||    
T  39532831 tctataaatagagatttggttcatttgatttggaca 39532866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 2211996 - 2212034
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2211996 ctctataaatagagacttggttcatttgatttggacaca 2212034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 40596414 - 40596452
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40596414 ctctataaatagagacttggttcatttgatttggacaca 40596452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 46914190 - 46914228
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  46914190 ctctataaatagagacttggttcatttgatttggacaca 46914228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 31848345 - 31848394
Alignment:
Q  196 attggttgtctgaatttttatcatcttaataatttcaactcaattatttc 245  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||||||||    
T  31848345 attggttgtccgaatttttatcattttaataatttgacctcaattatttc 31848394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 32463719 - 32463682
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||||||||||||||||| |||||    
T  32463719 tctataaatagagatttggttcatttgatttgaacaca 32463682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 55408218 - 55408255
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  55408218 tctataaatagagacttggttcatttgatttggacaca 55408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 55598 - 55634
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacac 339  Q
    |||||||||||||| ||||||||||||||||||||||    
T  55598 tctataaatagagacttggttcatttgatttggacac 55634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 56054866 - 56054718
Alignment:
Q  97 ggcgcgtgcgcaacacacgccgacaggtgcgagtgagctgcagg-agaggcggagagagaaaattgcatatggataatg-gatgacacgtggctgattgt 194  Q
    ||||||||||  |||| |||||||||| ||| |||||||| ||| ||   |||||||||||| ||  | |||||||| | ||||||| ||||||||||      
T  56054866 ggcgcgtgcggtacacgcgccgacagg-gcgcgtgagctggagggagttccggagagagaaagtt--aaatggataaagtgatgacatgtggctgatttc 56054770  T
Q  195 gattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| ||  || |||||||||||||||||| |||  ||||||||||||||    
T  56054769 gattggctgcttggatttttatcatcttaatattttggactcaattatttca 56054718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 47749727 - 47749766
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  47749727 cctccataaatagagacttggttcatttgatttggacaca 47749766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 3529908 - 3529946
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  3529908 ctctataaatagagacttggatcatttgatttggacaca 3529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 3614899 - 3614937
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  3614899 ctctataaatagagacttggatcatttgatttggacaca 3614937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 7401600 - 7401562
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  7401600 ctctataaattgagacttggttcatttgatttggacaca 7401562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 8995175 - 8995137
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  8995175 ctctataaatagagacttggatcatttgatttggacaca 8995137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 12159163 - 12159129
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttgga 336  Q
    ||||||||||||||| |||||||||||||||||||    
T  12159163 ctctataaatagagacttggttcatttgatttgga 12159129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 13113952 - 13113914
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  13113952 ctctataaatagagacttggatcatttgatttggacaca 13113914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 16021261 - 16021223
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  16021261 ctctataaatagagacttggatcatttgatttggacaca 16021223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 16171542 - 16171580
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  16171542 ctctataaatagagacttggatcatttgatttggacaca 16171580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 19409902 - 19409864
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  19409902 ctctagaaatagagacttggttcatttgatttggacaca 19409864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 21654502 - 21654540
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  21654502 ctctataaatagagacttggatcatttgatttggacaca 21654540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 28901538 - 28901500
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  28901538 ctctataaatagagacttggatcatttgatttggacaca 28901500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 31336182 - 31336220
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31336182 ctctataaatagagacttggatcatttgatttggacaca 31336220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 31848453 - 31848491
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31848453 ctctataaatagagacttggatcatttgatttggacaca 31848491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 48506245 - 48506283
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  48506245 ctctataaatagagacttggatcatttgatttggacaca 48506283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 56054669 - 56054631
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  56054669 ctctataaatagagacttggatcatttgatttggacaca 56054631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 33527115 - 33527082
Alignment:
Q  303 tctataaatagagatttggttcatttgatttgga 336  Q
    |||||||||||||| |||||||||||||||||||    
T  33527115 tctataaatagagacttggttcatttgatttgga 33527082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 38173960 - 38173923
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  38173960 tctataaatagagacttggatcatttgatttggacaca 38173923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39048704 - 39048737
Alignment:
Q  303 tctataaatagagatttggttcatttgatttgga 336  Q
    |||||||||||||| |||||||||||||||||||    
T  39048704 tctataaatagagacttggttcatttgatttgga 39048737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 39113334 - 39113375
Alignment:
Q  205 ctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  39113334 ctgaatttttatcatcttaataatttgacttcaattatttca 39113375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 39113432 - 39113469
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  39113432 tctataaatatagacttggttcatttgatttggacaca 39113469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 39532715 - 39532784
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| |||||||   ||||||||||| || |||| | ||| ||||||||||| |||||||||||||||    
T  39532715 tgacacatggctgaacttgattggttgtttggatttatctcaacttaataatttgaactcaattatttca 39532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 55501 - 55549
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattat 242  Q
    ||||||| || ||||||||||||||||||||| |||| |||||| ||||    
T  55501 tgattggctggctgaatttttatcatcttaattatttgaactcacttat 55549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 10090174 - 10090138
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  10090174 ctctacaaatagagacttggttcatttgatttggaca 10090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 16171445 - 16171497
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  16171445 tgattggctggctggatttttatcttcttaataatttggactcaattatttca 16171497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 31336069 - 31336137
Alignment:
Q  178 gacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||  |||||| ||  |||||||||||||| |||||| |||  ||||||||||||||    
T  31336069 gacacgtggctggtttcgattggctgcttgaatttttatcattttaatattttggactcaattatttca 31336137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 36564145 - 36564181
Alignment:
Q  304 ctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||  ||||||||||||||||||||    
T  36564145 ctataaatagagattctgttcatttgatttggacaca 36564181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 48506127 - 48506195
Alignment:
Q  178 gacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||| ||||||  |||||| ||  || |||||||||||||||||| |||  ||||||||||||||    
T  48506127 gacacgtgtctgatttcgattggctgcttggatttttatcatcttaatattttagactcaattatttca 48506195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 53347255 - 53347295
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  53347255 tgaatttttatcttcttaataatttggactcaattatttca 53347295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 54356575 - 54356611
Alignment:
Q  304 ctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||| |||||||| |||||||||||||||||||    
T  54356575 ctataaattgagatttgattcatttgatttggacaca 54356611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 26414909 - 26414668
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| || ||| ||| |||||||| |||| ||||||||||||||||||||||||| |    
T  26414909 aggagggaagtgttgaacacattcaacattgtttaactggctgccactgggacatgcg-gaagccaatagttggccaagcatggcgcgtgcgcaacacgc 26414811  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    ||  ||||| ||| ||||||||||||||||||||||| |||| ||||  | |||||||||| |||||||||| ||||| ||||||| |||||| ||||||    
T  26414810 gctaacaggcgcgggtgagctgcaggagaggcggagatagaagattgtttgtggataatgggtgacacgtggttgattttgattggctgtctggattttt 26414711  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||| |||||||||||||||||||| |||||||| |||||||    
T  26414710 atcatgttaataatttcaactcaattttttcactcaaaattaa 26414668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 5736723 - 5736482
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||| ||||||||||   ||||||| |||||||| | |||||||||| ||||||| | ||| | ||  | |||||||||||||||||||| |||| |    
T  5736723 aggaggggagtgttgaaccggttcaacaatgtttaattgcctgccacagggacacgcg-gcagcaagcaaatggccaagcatggcgcgtgcgctacacgc 5736625  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    || |||| | ||||||||    |||||||||||||||||||| ||||  | ||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  5736624 gcagacaagcgcgagtgacggtcaggagaggcggagagagaagattgtgtgtggataatggatgacacgtggctgattctgattggctgtctggattttt 5736525  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  5736524 atcatcttaataatttcaactcaattatttcacttgaaattaa 5736482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 34954701 - 34954942
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    ||| || || | |||||   | ||| ||||||| |||||||||||||||||      
T  34954701 aggagggaagtgttgaacacattcaacatggttgaaccggctgggtaagggacgcgtg-gaagcttgcggtttgccaagcctggcgcgtgcgcaacacgt 34954799  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggat-gacacgtggctgattgtgattggttgtctgaatttt 213  Q
    ||||||||| |||||||   |||||||||  |||||||||||   |   |||||||||||| | ||||||||||||||| ||||||| |||||| |||||    
T  34954800 gccgacaggcgcgagtggtgtgcaggagaa-cggagagagaagcatctttatggataatgggttgacacgtggctgattctgattggctgtctggatttt 34954898  T
Q  214 tatcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34954899 tatcatcttaataatttcaactcaattatttcactcgaaattaa 34954942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 17494102 - 17494174
Alignment:
Q  173 tggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||| |||| ||||||||| ||||||  ||||||| ||||| ||||||||||||||| |||||||||||||||    
T  17494102 tggataacacatggctgattctgattgactgtctga-tttttctcatcttaataatttgaactcaattatttca 17494174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 4625176 - 4625215
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  4625176 cctctataaatagagacttggttcatttgatttggacaca 4625215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 5736442 - 5736404
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5736442 ctctataaatagagacttggttcatttgatttggacaca 5736404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 8449686 - 8449724
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8449686 ctctataaatagagacttggttcatttgatttggacaca 8449724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 18028996 - 18029034
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18028996 ctctataaatagagacttggttcatttgatttggacaca 18029034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 26631805 - 26631843
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26631805 ctctataaatagagacttggttcatttgatttggacaca 26631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 26748611 - 26748649
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26748611 ctctataaatagagacttggttcatttgatttggacaca 26748649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 30470471 - 30470509
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  30470471 ctctataaatagagacttggttcatttgatttggacaca 30470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 34954985 - 34955023
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34954985 ctctataaatagagacttggttcatttgatttggacaca 34955023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 43617879 - 43617917
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  43617879 ctctataaatagagatttggttcttttgatttggacaca 43617917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 231900 - 231831
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| |||||||| ||||||| | |||||||| || ||||  ||||||||| |||||||||||||||    
T  231900 tgacacgcggctgattctgattgggtatctgaattattctcattctaataatttgaactcaattatttca 231831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 708311 - 708242
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| |||||||| ||||||| | |||||||| || ||||  ||||||||| |||||||||||||||    
T  708311 tgacacgcggctgattctgattgggtatctgaattattctcattctaataatttgaactcaattatttca 708242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 745523 - 745454
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| |||||||| ||||||| | |||||||| || ||||  ||||||||| |||||||||||||||    
T  745523 tgacacgcggctgattctgattgggtatctgaattattctcattctaataatttgaactcaattatttca 745454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 869418 - 869349
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| |||||||| ||||||| | |||||||| || ||||  ||||||||| |||||||||||||||    
T  869418 tgacacgcggctgattctgattgggtatctgaattattctcattctaataatttgaactcaattatttca 869349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 8607924 - 8607961
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||| |||||||||||||||||||||||||    
T  8607924 tctataaatagatatttggttcatttgatttggacaca 8607961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 35932388 - 35932332
Alignment:
Q  190 attgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||| || ||||||||||||| |||||||| |||  ||||||||||||||    
T  35932388 attgtgattggctggctgaatttttatcttcttaatactttggactcaattatttca 35932332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 42861118 - 42861079
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  42861118 cctctataaatagagacttggatcatttgatttggacaca 42861079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 12272111 - 12272149
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  12272111 ctctataaatagagacttggatcatttgatttggacaca 12272149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 13817471 - 13817433
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  13817471 ctctataaatagagacttggatcatttgatttggacaca 13817433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 31129102 - 31129140
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31129102 ctctataaatagagacttggatcatttgatttggacaca 31129140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 35101816 - 35101778
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  35101816 ctctataaatagagacttgattcatttgatttggacaca 35101778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 36912988 - 36912950
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  36912988 ctctataaatagagacttggttcatttaatttggacaca 36912950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 42860344 - 42860306
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  42860344 ctctataaatagagacttggatcatttgatttggacaca 42860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 45100674 - 45100712
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  45100674 ctctataaatagagacttggatcatttgatttggacaca 45100712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 13817569 - 13817520
Alignment:
Q  196 attggttgtctgaatttttatcatcttaataatttcaactcaattatttc 245  Q
    |||||||||| ||||| ||||||| |||||||||| | ||||||||||||    
T  13817569 attggttgtccgaattcttatcattttaataatttgacctcaattatttc 13817520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 23550287 - 23550218
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||  ||  |||||| ||  |||||||||||| ||||||||||||  ||||||||||||||    
T  23550287 tgacacgtggcttgttacgattggctgcttgaatttttatcttcttaataatttagactcaattatttca 23550218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 30289415 - 30289452
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||| || |||||||||||||||||||||||    
T  30289415 tctataaatagtgacttggttcatttgatttggacaca 30289452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 31129017 - 31129054
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  31129017 atttttatcatcttaataatttggactcaattatttca 31129054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 39810709 - 39810746
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  39810709 tctatagatagagacttggttcatttgatttggacaca 39810746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 42861224 - 42861175
Alignment:
Q  196 attggttgtctgaatttttatcatcttaataatttcaactcaattatttc 245  Q
    ||||||| |||| ||||||||||| |||||||||| | ||||||||||||    
T  42861224 attggttatctggatttttatcattttaataatttgacctcaattatttc 42861175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 29732209 - 29732157
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||| ||| || ||||||||| ||||||||||||  ||||||||||||||    
T  29732209 tgattggctgtttggatttttatcttcttaataatttggactcaattatttca 29732157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 9e-61; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 44450629 - 44450870
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||   |||||||||||||||| | |||||||||| ||||||| |  ||   ||  | |||||||||||||||||||| |||| |    
T  44450629 aggagggaagtgttgaaccggttcaacattgtttaattgcctgccacagggacacgcg-gctgcatgcaaatggccaagcatggcgcgtgcgctacacgc 44450727  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    ||||||||| ||||||||    |||||||||||||||||||| ||||  | ||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  44450728 gccgacaggcgcgagtgatggtcaggagaggcggagagagaagattgtgtgtggataatggatgacacgtggctgattctgattggctgtctggattttt 44450827  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  44450828 atcatctaaataatttcaactcaattatttcactcgaaattaa 44450870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 44651780 - 44651539
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||   |||||||||||||||| | |||||||||| ||||||| |  ||   ||  | |||||||||||||||||||| |||| |    
T  44651780 aggagggaagtgttgaaccggttcaacattgtttaattgcctgccacagggacacgcg-gctgcatgcaaatggccaagcatggcgcgtgcgctacacgc 44651682  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaattttt 214  Q
    ||||||||| ||||||||    |||||||||||||||||||| ||||  | ||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  44651681 gccgacaggcgcgagtgacggtcaggagaggcggagagagaagattgtgtgtggataatggatgacacgtggctgattctgattggctgtctggattttt 44651582  T
Q  215 atcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  44651581 atcatctaaataatttcaactcaattatttcactcgaaattaa 44651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 8465110 - 8465030
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaa-ttatttcactcgaaattaa 257  Q
    |||||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8465110 tgacacatggctgattttgat-ggttgtctgattttttatcatcttaataatttcaactcaatttatttcactcgaaattaa 8465030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 3754597 - 3754649
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  3754597 tgattggttgcctgaatttttatcatcttaaaaatttgaactcaattatttca 3754649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 39149676 - 39149608
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||| |||||| ||||||| |||||| |||||| ||||||||||||||| || ||||||||||||    
T  39149676 tgacacgtgactgattctgattggctgtctgcattttt-tcatcttaataatttgaattcaattatttca 39149608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 8464987 - 8464949
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8464987 ctctataaatagagacttggttcatttgatttggacaca 8464949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 27629992 - 27630030
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  27629992 ctctataaatagagacttggttcatttgatttggacaca 27630030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 31471608 - 31471570
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  31471608 ctctataaatagagacttggttcatttgatttggacaca 31471570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 37419876 - 37419914
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37419876 ctctataaatagagacttggttcatttgatttggacaca 37419914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 643395 - 643444
Alignment:
Q  196 attggttgtctgaatttttatcatcttaataatttcaactcaattatttc 245  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||||||||    
T  643395 attggttgtccgaatttttatcattttaataatttgacctcaattatttc 643444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 3754708 - 3754745
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3754708 tctataaatagagaattggttcatttgatttggacaca 3754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 36303637 - 36303568
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||| ||||||| | ||| |||| || ||||  ||||||||| |||||||||||||||    
T  36303637 tgacacgtggctgattctgattggctatctaaattattctcattctaataatttgaactcaattatttca 36303568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 44334698 - 44334661
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  44334698 tctataaataaagatttggttcatttgatttggacaca 44334661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 48729975 - 48729906
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||| ||||||| | ||| |||| || ||||  ||||||||| |||||||||||||||    
T  48729975 tgacacgtggctgattctgattggctatctaaattattctcattctaataatttgaactcaattatttca 48729906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 37646089 - 37646125
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37646089 ctctataaatagagacttggttcatttgatttggaca 37646125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 44450917 - 44450953
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||||||||||||||||||||    
T  44450917 ctctataaatagagacttggttcatttgatttggaca 44450953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 44651495 - 44651459
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||||||||||||||||||||    
T  44651495 ctctataaatagagacttggttcatttgatttggaca 44651459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 45242473 - 45242434
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  45242473 cctctataaatagagacttggatcatttgatttggacaca 45242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 643502 - 643540
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  643502 ctctataaatagagacttggatcatttgatttggacaca 643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 2474774 - 2474812
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  2474774 ctctataaatagagacttggatcatttgatttggacaca 2474812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 8471633 - 8471595
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  8471633 ctctataaatagagacttggatcatttgatttggacaca 8471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 10265684 - 10265722
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  10265684 ctctataaatagagacttggatcatttgatttggacaca 10265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 17675995 - 17676033
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  17675995 ctctataaatagagacttggatcatttgatttggacaca 17676033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 17786666 - 17786628
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  17786666 ctctataaatagagacttggttcatttgatttgtacaca 17786628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 19578562 - 19578600
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  19578562 ctctataaatagagacttggatcatttgatttggacaca 19578600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 37690946 - 37690984
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  37690946 ctctataaatagagacttggatcatttgatttggacaca 37690984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 45623181 - 45623219
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  45623181 ctctataaatagagacttggatcatttgatttggacaca 45623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 51156335 - 51156373
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  51156335 ctctataaatagagacttggatcatttgatttggacaca 51156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 51494124 - 51494162
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  51494124 ctctataaatagagacttggatcatttgatttggacaca 51494162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 52930344 - 52930382
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  52930344 ctctataaatagagacttggttcatttgatttgaacaca 52930382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 20584379 - 20584412
Alignment:
Q  210 tttttatcatcttaataatttcaactcaattatt 243  Q
    ||||| ||||||||||||||||||||||||||||    
T  20584379 tttttttcatcttaataatttcaactcaattatt 20584412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 20584473 - 20584510
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  20584473 tctataaatagagacttggttcatttgattttgacaca 20584510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 36231429 - 36231392
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  36231429 atttttatcatcttaatattttgaactcaattatttca 36231392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 45363986 - 45363949
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  45363986 atttttatcttcttaataatttgaactcaattatttca 45363949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 48927295 - 48927258
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||  |||||||||||||||||||||||    
T  48927295 tctataaatagaggcttggttcatttgatttggacaca 48927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 8471724 - 8471684
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  8471724 tgaatttttatcatcttaatattttggactcaattatttca 8471684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 10265503 - 10265571
Alignment:
Q  178 gacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||  |||||| ||  || |||||||||||||||||| |||  ||||||||||||||    
T  10265503 gacacgtggctggtttcgattggctgcttggatttttatcatcttaatattttggactcaattatttca 10265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 43739539 - 43739499
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  43739539 tgaatttttatcatcttaatattttggactcaattatttca 43739499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 2778630 - 2778747
Alignment:
Q  125 gcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaa 224  Q
    ||||||| ||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  2778630 gcgagtgtgctgcaggagaggcggagagagaaaattctttgtggataatggatgacacgtggctgattttgattggttgtctggatttttatcatcttaa 2778729  T
Q  225 taatttcaactcaattat 242  Q
    ||||||||||||||||||    
T  2778730 taatttcaactcaattat 2778747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 16334010 - 16333769
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||||||||||||||||| ||  || ||    ||| ||||| |  ||||   | ||| ||||||| ||||||||||||||||| |    
T  16334010 aggagggaagtgttgaacacattcaacattgttgaacgggttgggtaagggacacgggt-aagcttgcggtttgccaagcttggcgcgtgcgcaacacgc 16333912  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatg-gatgacacgtggctgattgtgattggttgtctgaatttt 213  Q
    ||||||||| |||||||   |||||||||  ||||||||||| | |   | ||||||||| | |||||||||||||||| ||||||| |||||| ||| |    
T  16333911 gccgacaggcgcgagtggtgtgcaggagaa-cggagagagaagaatctttgtggataatgagttgacacgtggctgattctgattggctgtctggattgt 16333813  T
Q  214 tatcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16333812 tatcatcttaataatttcaactcaattatttcactcgaaattaa 16333769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 16125615 - 16125856
Alignment:
Q  15 aggagggaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcgtgcgcaacacac 114  Q
    ||||||||||||||||||||||||||||||||| ||  || ||    ||  |||||||  ||||   | ||| ||||||| || ||| |||||||||| |    
T  16125615 aggagggaagtgttgaacacattcaacattgttgaacgggttgggtaagagacacgcgt-aagcttgcggtttgccaagcctgacgcatgcgcaacacgc 16125713  T
Q  115 gccgacaggtgcgagtgagctgcaggagaggcggagagagaaaattgcatatggataatg-gatgacacgtggctgattgtgattggttgtctgaatttt 213  Q
    ||||||||| |||||||   |||||||||  ||||||||||| | |   | ||||||||| | |||||| ||||||||| ||||||| |||||| ||| |    
T  16125714 gccgacaggcgcgagtggtgtgcaggagaa-cggagagagaagaatctttgtggataatgagttgacacatggctgattctgattggctgtctggattgt 16125812  T
Q  214 tatcatcttaataatttcaactcaattatttcactcgaaattaa 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16125813 tatcatcttaataatttcaactcaattatttcactcgaaattaa 16125856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 2778552 - 2778632
Alignment:
Q  21 gaagtgttgaacacattcaacattgtttaatcggctgccacaggaacacgcgcgaagccaacagttagccaagcatggcgcg 102  Q
    |||||||||||||||||||||||||||||| |  |||||||||| ||||||| ||||| ||| ||| |||||||||||||||    
T  2778552 gaagtgttgaacacattcaacattgtttaaccacctgccacagggacacgcg-gaagcaaaccgttggccaagcatggcgcg 2778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 6332951 - 6332987
Alignment:
Q  304 ctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||||||||||||||||||||||||    
T  6332951 ctataaatagagatttggttcatttgatttggacaca 6332987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 1987565 - 1987526
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  1987565 cctctataaatagagacttggttcatttgatttggacaca 1987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 926502 - 926540
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  926502 ctctataaatagagacttggttcatttgatttggacaca 926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 4296303 - 4296341
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4296303 ctctataaatagagacttggttcatttgatttggacaca 4296341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 8855419 - 8855381
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8855419 ctctataaatagagacttggttcatttgatttggacaca 8855381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 36855056 - 36855094
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36855056 ctctataaatagagacttggttcatttgatttggacaca 36855094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 13151175 - 13151212
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||| |||||||||||||||    
T  13151175 atttttatcatcttaataatttgaactcaattatttca 13151212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 14151823 - 14151860
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||| |||||||||||||||    
T  14151823 atttttatcatcttaataatttgaactcaattatttca 14151860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 43494918 - 43494955
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  43494918 tctataaatagagacttggttcatttgatttggacaca 43494955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 31184938 - 31184974
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31184938 ctctataaatagagacttggttcatttgatttggaca 31184974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 9072620 - 9072659
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  9072620 cctctataaatagagacttggatcatttgatttggacaca 9072659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 12858312 - 12858273
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  12858312 cctctataaatagagacttggatcatttgatttggacaca 12858273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 14383392 - 14383353
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  14383392 cctctataaatagagacttggatcatttgatttggacaca 14383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 30819317 - 30819356
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  30819317 cctctataaatagagacttggatcatttgatttggacaca 30819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 1072712 - 1072750
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  1072712 ctctataaatagagacttggatcatttgatttggacaca 1072750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 7585184 - 7585222
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  7585184 ctctataaatagagacttggatcatttgatttggacaca 7585222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 9118246 - 9118208
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  9118246 ctctataaatagagacttggatcatttgatttggacaca 9118208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 9118395 - 9118296
Alignment:
Q  146 cggagagagaaaattgcatatggataatg-gatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattattt 244  Q
    |||||||||||||||  | |||||||| | || |||||||| ||||||  |||||| ||  || |||||||||||||||||| |||  ||||||||||||    
T  9118395 cggagagagaaaatt--aaatggataaagtgaggacacgtgtctgatttcgattggctgcttggatttttatcatcttaatattttagactcaattattt 9118298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 22349552 - 22349590
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  22349552 ctctataaatagagacttggatcatttgatttggacaca 22349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 36527242 - 36527204
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  36527242 ctctataaatagagacttggatcatttgatttggacaca 36527204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 37246074 - 37246036
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  37246074 ctctataaatagagacttggttcatttaatttggacaca 37246036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 39432412 - 39432450
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  39432412 ctctataaatagagacttggatcatttgatttggacaca 39432450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 43022114 - 43022076
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  43022114 ctctataaatagagacttggatcatttgatttggacaca 43022076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 44280538 - 44280500
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  44280538 ctctataaatagagacttggatcatttgatttggacaca 44280500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 2778797 - 2778834
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacac 339  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2778797 ctctataaatagagacttggtttatttgatttggacac 2778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 1308241 - 1308281
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  1308241 tgaatttttatcttcttaataatttggactcaattatttca 1308281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 7762750 - 7762790
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  7762750 tgaatttttatcttcttaataatttggactcaattatttca 7762790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 17486309 - 17486269
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  17486309 tgaatttttatcttcttaataatttggactcaattatttca 17486269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 31204664 - 31204700
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    |||| |||||||||| |||||||||||||||||||||    
T  31204664 ctctgtaaatagagacttggttcatttgatttggaca 31204700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 39490640 - 39490600
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  39490640 tgaatttttatcttcttaataatttggactcaattatttca 39490600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 37882044 - 37882094
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattattt 244  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  37882044 tgattggttatctgaatttttatcatcttaataatttgaactcaattattt 37882094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 34528970 - 34529011
Alignment:
Q  205 ctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  34528970 ctgaatttttatcatcttaataatttgaactcaattatttca 34529011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 8680866 - 8680918
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||| |||||||||||||||||||||||||| || | ||||||||||    
T  8680866 tgattggttgcctgaatttttatcatcttaataatttgaatttaattatttca 8680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 14279337 - 14279297
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  14279337 tgaatttttatcatcttaataatttgaactcaattatttca 14279297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 25033608 - 25033570
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25033608 ctctataaatagagacttggttcatttgatttggacaca 25033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 25653244 - 25653206
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25653244 ctctataaatagagacttggttcatttgatttggacaca 25653206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 25653328 - 25653282
Alignment:
Q  210 tttttatcatcttaataatttcaactcaa-ttatttcactcgaaatt 255  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  25653328 tttttatcatcttaataattccaactcaatttatttcactcgaaatt 25653282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 41152527 - 41152565
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41152527 ctctataaatagagacttggttcatttgatttggacaca 41152565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 2300237 - 2300200
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2300237 tctataaatagagatttggttcatttgatttagacaca 2300200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 9958226 - 9958157
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||  ||  |||||||||  |||||||||||| ||||||||||||  ||||||||||||||    
T  9958226 tgacacgtggcttgttacgattggttgcttgaatttttatcttcttaataatttggactcaattatttca 9958157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 14279254 - 14279217
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  14279254 tctataaatagagacttggttcatttgatttggacaca 14279217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 34529066 - 34529103
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34529066 tctataaatagagacttggttcatttgatttggacaca 34529103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 7827533 - 7827497
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7827533 ctctataaatagagacttggttcatttgatttggaca 7827497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 27407318 - 27407370
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||  ||||||||| ||||||||||||||| |||| ||||||||||    
T  27407318 tgattggttgcatgaatttttgtcatcttaataatttgaactaaattatttca 27407370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 3455249 - 3455210
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  3455249 cctctataaatagagacttggatcatttgatttggacaca 3455210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 4580430 - 4580391
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  4580430 cctctataaatagagacttggatcatttgatttggacaca 4580391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 4938593 - 4938558
Alignment:
Q  208 aatttttatcatcttaataatttcaactcaattatt 243  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4938593 aatttttatcatcttaataatttgaactcaattatt 4938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 27946042 - 27946003
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  27946042 cctctataaatagagacttggatcatttgatttggacaca 27946003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 31011729 - 31011768
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  31011729 cctctataaatagagacttggatcatttgatttggacaca 31011768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 8176020 - 8176058
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  8176020 ctctataaatagagacttggttcatttaatttggacaca 8176058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 11958440 - 11958390
Alignment:
Q  194 tgattggttgtctgaatttttatcatcttaataatttcaactcaattattt 244  Q
    ||||||| |||||||||||||||| ||||||| |||| |||||| ||||||    
T  11958440 tgattggctgtctgaatttttatcgtcttaattatttgaactcacttattt 11958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 13592565 - 13592603
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  13592565 ctctataaatagagacttggatcatttgatttggacaca 13592603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 15973105 - 15973063
Alignment:
Q  204 tctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||| || |||||||||||| |||||||||||||||    
T  15973105 tctgaatttttctcttcttaataatttgaactcaattatttca 15973063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 21368674 - 21368636
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  21368674 ctctataaatagaaacttggttcatttgatttggacaca 21368636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 31008053 - 31008091
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31008053 ctctataaatagagacttggatcatttgatttggacaca 31008091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 32973038 - 32973076
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32973038 ctctataaatagagacttggatcatttgatttggacaca 32973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 36572052 - 36572090
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  36572052 ctctataaatagagacttggatcatttgatttggacaca 36572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 40892212 - 40892174
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  40892212 ctctataaatagagacttggatcatttgatttggacaca 40892174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 12913270 - 12913233
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  12913270 tctataaataaagacttggttcatttgatttggacaca 12913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 15973005 - 15972968
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  15973005 tctataaatagagacttgattcatttgatttggacaca 15972968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 27595197 - 27595238
Alignment:
Q  205 ctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  27595197 ctgaatgtttctcatcttaattatttcaactcaattatttca 27595238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 34917921 - 34917990
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||| ||||||| | ||||||||||| || |||| | |||||||||||||||  ||| ||||||||||    
T  34917921 tgacacatggctgaatctgattggttgtttggatttatctcatcttaataatttgtacttaattatttca 34917990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 37882130 - 37882167
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  37882130 tctataaatagagacttggttaatttgatttggacaca 37882167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 4218982 - 4219022
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  4218982 tgaatttttatcttcttaataatttggactcaattatttca 4219022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 12913352 - 12913316
Alignment:
Q  210 tttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  12913352 tttttatcaacttaataatttaaactcaattatttca 12913316  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 19241728 - 19241692
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  19241728 ctctataaatagagacttggatcatttgatttggaca 19241692  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 30644603 - 30644643
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  30644603 tgaatttttatcatcttaatattttggactcaattatttca 30644643  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 42318417 - 42318361
Alignment:
Q  190 attgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||| || ||| ||||||||| |||||||| |||  ||||||||||||||    
T  42318417 attgtgattggctggctggatttttatcttcttaatactttggactcaattatttca 42318361  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 42804351 - 42804391
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    |||||||||||| ||||||||||||  ||||||||||||||    
T  42804351 tgaatttttatcttcttaataatttggactcaattatttca 42804391  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 7541362 - 7541325
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7541362 tctataaatagagatttggttcatttgatttggacaca 7541325  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 32360286 - 32360205
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactc-aattatttcactcgaaattaa 257  Q
    |||||| ||||||||| ||||||| |||||   ||||||||||||||||||||  ||||| | |||||||||||||||||||    
T  32360286 tgacacatggctgattctgattggctgtctcgttttttatcatcttaataattcaaactcgatttatttcactcgaaattaa 32360205  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 198247 - 198209
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  198247 ctctataaatagagacttggttcatttgatttggacaca 198209  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 2503765 - 2503727
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2503765 ctctataaatagagacttggttcatttgatttggacaca 2503727  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 34328820 - 34328782
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34328820 ctctataaatagagacttggttcatttgatttggacaca 34328782  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 6725324 - 6725361
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6725324 tctataaatagagacttggttcatttgatttggacaca 6725361  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 635103 - 635064
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  635103 cctctataaatagagacttggatcatttgatttggacaca 635064  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 6377130 - 6377169
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  6377130 cctctataaatagagacttggatcatttgatttggacaca 6377169  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 17957998 - 17958037
Alignment:
Q  301 cctctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  17957998 cctctataaatagagacttggatcatttgatttggacaca 17958037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 8668856 - 8668818
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  8668856 ctctataaatagagacttggatcatttgatttggacaca 8668818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 10886660 - 10886622
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  10886660 ctctataaatagagacttggatcatttgatttggacaca 10886622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 34841897 - 34841859
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  34841897 ctctataaatagagacttggatcatttgatttggacaca 34841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 34242827 - 34242790
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  34242827 tctacaaatagagatttggatcatttgatttggacaca 34242790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 8222622 - 8222582
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  8222622 tgaatttttatcatcttaatattttggactcaattatttca 8222582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 30446773 - 30446733
Alignment:
Q  206 tgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  30446773 tgaatttttatcatcttaatattttggactcaattatttca 30446733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 6370 - 6408
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6370 ctctataaatagagacttggttcatttgatttggacaca 6408  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 83434 - 83514
Alignment:
Q  166 tggataatggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||| | ||||||||||  | | ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  83434 tggataatgcaggacacgtggcgcaatctgattggctggctggatttttatcttcttaataatttggactcaattatttca 83514  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 106386 - 106306
Alignment:
Q  166 tggataatggatgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||| | |||||||||   ||| ||||||| || ||| ||||||||| ||||||||||||  ||||||||||||||    
T  106386 tggataatgcaggacacgtggtgcattttgattggctggctggatttttatcttcttaataatttggactcaattatttca 106306  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 109868 - 109906
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggacaca 340  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  109868 ctctataaatagagacttggatcatttgatttggacaca 109906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 964 - 1033
Alignment:
Q  177 tgacacgtggctgattgtgattggttgtctgaatttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||  ||  |||||| ||  |||||||||||| ||||||||||||  ||||||||||||||    
T  964 tgacacgtggcttgttacgattggctgcttgaatttttatcttcttaataattttgactcaattatttca 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 349 - 313
Alignment:
Q  302 ctctataaatagagatttggttcatttgatttggaca 338  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  349 ctctataaatagagacttggatcatttgatttggaca 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 64 - 27
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacaca 340  Q
    |||||||||||| | |||||||||||||||||||||||    
T  64 tctataaatagatacttggttcatttgatttggacaca 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 158 - 121
Alignment:
Q  209 atttttatcatcttaataatttcaactcaattatttca 246  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  158 atttttatcatcttaataattttgactcaattatttca 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 124458 - 124422
Alignment:
Q  303 tctataaatagagatttggttcatttgatttggacac 339  Q
    |||||||||||||| |||||| |||||||||||||||    
T  124458 tctataaatagagacttggtttatttgatttggacac 124422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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