View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5786_low_4 (Length: 599)

Name: NF5786_low_4
Description: NF5786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5786_low_4
NF5786_low_4
[»] chr8 (28 HSPs)
chr8 (13-254)||(40584245-40584485)
chr8 (494-585)||(40584557-40584648)
chr8 (359-473)||(15882230-15882344)
chr8 (360-473)||(40891044-40891156)
chr8 (359-500)||(38629504-38629652)
chr8 (359-473)||(29780987-29781100)
chr8 (359-464)||(37114268-37114372)
chr8 (359-473)||(17426656-17426771)
chr8 (359-473)||(23940832-23940946)
chr8 (359-473)||(38520048-38520161)
chr8 (359-473)||(12234496-12234610)
chr8 (400-473)||(4262004-4262077)
chr8 (358-464)||(38405167-38405273)
chr8 (360-473)||(24741851-24741963)
chr8 (399-470)||(11828627-11828698)
chr8 (359-499)||(24211272-24211419)
chr8 (359-464)||(8210353-8210457)
chr8 (359-473)||(33100673-33100786)
chr8 (400-473)||(14834700-14834770)
chr8 (403-473)||(35467243-35467313)
chr8 (404-473)||(9775226-9775297)
chr8 (400-451)||(25264277-25264328)
chr8 (360-473)||(40393754-40393865)
chr8 (359-441)||(10778687-10778768)
chr8 (401-436)||(29869938-29869973)
chr8 (401-465)||(7959856-7959920)
chr8 (359-387)||(33100675-33100703)
chr8 (401-473)||(33390717-33390789)
[»] chr3 (57 HSPs)
chr3 (359-473)||(25446279-25446393)
chr3 (360-503)||(4072262-4072414)
chr3 (334-472)||(22101170-22101307)
chr3 (358-473)||(3970519-3970633)
chr3 (359-473)||(8831770-8831884)
chr3 (359-473)||(10254598-10254712)
chr3 (359-473)||(21969185-21969298)
chr3 (359-473)||(21991621-21991734)
chr3 (334-473)||(22176114-22176252)
chr3 (358-473)||(13078191-13078305)
chr3 (359-495)||(45487829-45487972)
chr3 (360-470)||(55340324-55340434)
chr3 (360-473)||(12789637-12789749)
chr3 (359-470)||(12838107-12838217)
chr3 (359-470)||(32237425-32237535)
chr3 (359-471)||(26906484-26906595)
chr3 (359-471)||(36278786-36278897)
chr3 (359-473)||(10117545-10117654)
chr3 (359-495)||(36822758-36822901)
chr3 (359-473)||(43639109-43639223)
chr3 (359-473)||(25488369-25488482)
chr3 (359-473)||(25561041-25561154)
chr3 (398-470)||(35368801-35368873)
chr3 (359-495)||(36657431-36657574)
chr3 (359-473)||(50099462-50099577)
chr3 (359-473)||(404074-404188)
chr3 (359-469)||(43150510-43150619)
chr3 (359-459)||(45712945-45713044)
chr3 (359-449)||(10017144-10017233)
chr3 (398-473)||(46679329-46679404)
chr3 (360-471)||(42105413-42105523)
chr3 (359-473)||(5529921-5530035)
chr3 (402-463)||(39677312-39677373)
chr3 (370-473)||(44920674-44920776)
chr3 (360-473)||(13724016-13724128)
chr3 (359-433)||(36329248-36329321)
chr3 (407-473)||(26976870-26976936)
chr3 (360-471)||(26977721-26977831)
chr3 (359-470)||(39850375-39850486)
chr3 (359-442)||(10441317-10441399)
chr3 (399-460)||(44611422-44611483)
chr3 (360-464)||(37506164-37506266)
chr3 (400-461)||(157008-157069)
chr3 (359-473)||(1476579-1476692)
chr3 (360-438)||(38125242-38125319)
chr3 (400-459)||(49984001-49984060)
chr3 (400-473)||(297565-297638)
chr3 (405-470)||(46222059-46222124)
chr3 (398-464)||(32363122-32363188)
chr3 (360-438)||(46664207-46664284)
chr3 (448-503)||(22101161-22101217)
chr3 (401-464)||(37536941-37537004)
chr3 (360-390)||(32362892-32362922)
chr3 (403-468)||(51579000-51579065)
chr3 (448-495)||(22176113-22176161)
chr3 (359-387)||(35368579-35368607)
chr3 (359-387)||(36822790-36822818)
[»] chr6 (24 HSPs)
chr6 (330-470)||(13439690-13439836)
chr6 (360-473)||(15546663-15546775)
chr6 (336-473)||(8091063-8091205)
chr6 (359-495)||(885415-885558)
chr6 (359-495)||(21379939-21380082)
chr6 (359-473)||(14393591-14393707)
chr6 (398-473)||(4238922-4238997)
chr6 (333-470)||(4890511-4890654)
chr6 (359-499)||(11687137-11687284)
chr6 (359-473)||(3369015-3369128)
chr6 (359-460)||(18998157-18998258)
chr6 (358-464)||(31764362-31764467)
chr6 (360-473)||(20501737-20501849)
chr6 (359-473)||(29609031-29609144)
chr6 (360-470)||(13172605-13172713)
chr6 (360-473)||(7808640-7808752)
chr6 (404-501)||(17279601-17279703)
chr6 (424-473)||(6433751-6433800)
chr6 (400-464)||(30905046-30905110)
chr6 (400-441)||(17367117-17367158)
chr6 (398-439)||(34522322-34522363)
chr6 (401-473)||(7187633-7187705)
chr6 (359-387)||(7808722-7808750)
chr6 (359-387)||(20501819-20501847)
[»] chr4 (32 HSPs)
chr4 (359-496)||(1298942-1299086)
chr4 (360-499)||(42274486-42274633)
chr4 (359-496)||(18417687-18417831)
chr4 (349-473)||(21048733-21048854)
chr4 (359-473)||(530697-530810)
chr4 (359-473)||(20435168-20435281)
chr4 (398-473)||(24915822-24915897)
chr4 (360-470)||(35360707-35360816)
chr4 (358-471)||(13204406-13204518)
chr4 (360-473)||(4688275-4688388)
chr4 (359-473)||(24969569-24969685)
chr4 (398-473)||(32318748-32318823)
chr4 (359-499)||(55107554-55107701)
chr4 (359-464)||(4552815-4552919)
chr4 (398-494)||(23928567-23928670)
chr4 (359-473)||(27434640-27434753)
chr4 (401-473)||(56552132-56552204)
chr4 (407-499)||(3422423-3422523)
chr4 (402-473)||(9355581-9355652)
chr4 (359-470)||(24294497-24294607)
chr4 (359-447)||(28809901-28809988)
chr4 (398-473)||(2272434-2272509)
chr4 (360-492)||(4895003-4895134)
chr4 (398-473)||(55049428-55049503)
chr4 (399-470)||(16995585-16995656)
chr4 (359-438)||(52824269-52824347)
chr4 (402-470)||(19600971-19601039)
chr4 (428-471)||(43486230-43486273)
chr4 (399-433)||(52587383-52587417)
chr4 (400-433)||(36030998-36031031)
chr4 (401-473)||(47452838-47452910)
chr4 (400-460)||(23481962-23482022)
[»] chr2 (29 HSPs)
chr2 (360-499)||(1923974-1924121)
chr2 (359-494)||(9933569-9933710)
chr2 (359-473)||(3116906-3117019)
chr2 (360-473)||(45408656-45408768)
chr2 (359-470)||(42713808-42713919)
chr2 (359-473)||(24101860-24101973)
chr2 (359-471)||(23835906-23836018)
chr2 (359-471)||(9281377-9281488)
chr2 (359-470)||(2818696-2818806)
chr2 (360-473)||(9850786-9850897)
chr2 (359-473)||(16705763-16705876)
chr2 (359-473)||(27920602-27920715)
chr2 (359-464)||(12850579-12850683)
chr2 (360-497)||(34490487-34490631)
chr2 (359-473)||(7737094-7737208)
chr2 (359-470)||(34455915-34456025)
chr2 (359-473)||(20892914-20893028)
chr2 (398-470)||(43476014-43476086)
chr2 (360-473)||(22269753-22269865)
chr2 (358-470)||(29229394-29229506)
chr2 (358-470)||(29342694-29342806)
chr2 (400-470)||(40362553-40362622)
chr2 (371-473)||(6605777-6605877)
chr2 (358-470)||(7116399-7116510)
chr2 (400-470)||(17500037-17500107)
chr2 (428-470)||(17434728-17434770)
chr2 (473-502)||(3116867-3116896)
chr2 (360-426)||(17434755-17434821)
chr2 (359-387)||(34490569-34490597)
[»] chr1 (49 HSPs)
chr1 (359-473)||(15324656-15324770)
chr1 (360-473)||(47940598-47940711)
chr1 (359-473)||(9978079-9978193)
chr1 (359-495)||(27240922-27241065)
chr1 (359-473)||(5189499-5189612)
chr1 (358-473)||(19954939-19955053)
chr1 (359-473)||(3607757-3607870)
chr1 (333-470)||(957596-957729)
chr1 (360-469)||(14387047-14387155)
chr1 (360-472)||(6079415-6079526)
chr1 (359-471)||(48954244-48954355)
chr1 (359-499)||(50162532-50162680)
chr1 (359-473)||(26208454-26208568)
chr1 (359-473)||(42561323-42561436)
chr1 (360-496)||(4299403-4299535)
chr1 (359-471)||(2854562-2854673)
chr1 (359-471)||(23698532-23698643)
chr1 (360-473)||(27928326-27928438)
chr1 (359-473)||(50627161-50627274)
chr1 (359-473)||(27926279-27926393)
chr1 (359-473)||(2125098-2125211)
chr1 (359-473)||(1387808-1387921)
chr1 (359-473)||(19797009-19797122)
chr1 (359-495)||(40647146-40647291)
chr1 (398-464)||(49284331-49284397)
chr1 (360-470)||(21930411-21930518)
chr1 (359-504)||(51789586-51789736)
chr1 (358-444)||(9895282-9895367)
chr1 (400-473)||(51276723-51276796)
chr1 (403-495)||(36880584-36880684)
chr1 (365-473)||(27670179-27670286)
chr1 (359-473)||(48645042-48645154)
chr1 (398-473)||(50856349-50856424)
chr1 (400-457)||(29598393-29598450)
chr1 (399-459)||(5059604-5059664)
chr1 (359-462)||(22339023-22339125)
chr1 (408-460)||(2302481-2302533)
chr1 (401-461)||(36007860-36007920)
chr1 (398-473)||(35547728-35547803)
chr1 (368-430)||(28243997-28244058)
chr1 (401-469)||(39015225-39015293)
chr1 (400-464)||(42010437-42010501)
chr1 (359-390)||(49285085-49285116)
chr1 (398-448)||(16518353-16518403)
chr1 (401-442)||(25559214-25559255)
chr1 (473-505)||(2854683-2854715)
chr1 (401-441)||(18651310-18651350)
chr1 (428-464)||(28447927-28447963)
chr1 (359-387)||(36880624-36880652)
[»] scaffold0122 (1 HSPs)
scaffold0122 (359-473)||(45864-45977)
[»] chr7 (37 HSPs)
chr7 (359-473)||(30259094-30259207)
chr7 (359-473)||(20184266-20184380)
chr7 (359-473)||(24836050-24836163)
chr7 (359-473)||(30594723-30594836)
chr7 (359-473)||(34052309-34052422)
chr7 (359-473)||(31231642-31231757)
chr7 (359-495)||(39617839-39617983)
chr7 (358-473)||(35339306-35339420)
chr7 (365-470)||(12142228-12142333)
chr7 (358-471)||(3953072-3953184)
chr7 (332-473)||(9285742-9285888)
chr7 (332-473)||(9289809-9289955)
chr7 (365-473)||(45997536-45997643)
chr7 (359-473)||(10936498-10936611)
chr7 (359-473)||(38883251-38883364)
chr7 (360-473)||(40358146-40358258)
chr7 (398-473)||(31521553-31521628)
chr7 (322-471)||(37093755-37093909)
chr7 (400-473)||(39143740-39143813)
chr7 (398-470)||(16876487-16876559)
chr7 (359-470)||(25742466-25742572)
chr7 (358-441)||(24123815-24123899)
chr7 (328-447)||(38528464-38528590)
chr7 (399-464)||(33749713-33749778)
chr7 (360-473)||(48103399-48103508)
chr7 (401-473)||(10398390-10398462)
chr7 (405-460)||(44148722-44148777)
chr7 (358-456)||(29277867-29277963)
chr7 (69-152)||(3910683-3910767)
chr7 (399-470)||(38989102-38989173)
chr7 (400-473)||(47237460-47237526)
chr7 (401-443)||(1402990-1403032)
chr7 (401-443)||(25572883-25572925)
chr7 (359-389)||(47237539-47237569)
chr7 (407-464)||(21581183-21581240)
chr7 (448-494)||(24123875-24123918)
chr7 (359-387)||(35665663-35665691)
[»] chr5 (32 HSPs)
chr5 (359-473)||(1138589-1138702)
chr5 (334-473)||(21259758-21259902)
chr5 (359-464)||(24397283-24397387)
chr5 (359-473)||(20476461-20476574)
chr5 (359-464)||(21261973-21262077)
chr5 (360-473)||(33629373-33629487)
chr5 (359-473)||(15855873-15855986)
chr5 (359-473)||(16472985-16473098)
chr5 (359-473)||(35420640-35420753)
chr5 (335-461)||(37655192-37655316)
chr5 (360-470)||(4266013-4266122)
chr5 (360-473)||(19976292-19976405)
chr5 (364-473)||(1456050-1456158)
chr5 (335-504)||(37552298-37552473)
chr5 (360-470)||(13754322-13754431)
chr5 (360-470)||(43539138-43539247)
chr5 (360-451)||(12744857-12744947)
chr5 (360-470)||(12807942-12808051)
chr5 (400-471)||(780824-780895)
chr5 (399-470)||(32623246-32623317)
chr5 (402-463)||(8364668-8364729)
chr5 (359-452)||(1164844-1164937)
chr5 (398-470)||(18236536-18236608)
chr5 (359-464)||(35806965-35807069)
chr5 (414-473)||(21591241-21591300)
chr5 (414-473)||(21595358-21595417)
chr5 (399-464)||(35276329-35276394)
chr5 (415-473)||(2529066-2529124)
chr5 (401-441)||(2538467-2538507)
chr5 (417-464)||(28056179-28056226)
chr5 (401-435)||(12257580-12257614)
chr5 (400-432)||(735346-735378)
[»] scaffold0086 (1 HSPs)
scaffold0086 (359-473)||(48156-48269)
[»] scaffold0188 (1 HSPs)
scaffold0188 (360-473)||(7117-7229)
[»] scaffold0653 (1 HSPs)
scaffold0653 (332-473)||(3421-3567)
[»] scaffold0107 (1 HSPs)
scaffold0107 (359-471)||(51093-51204)
[»] scaffold0137 (1 HSPs)
scaffold0137 (364-473)||(10151-10258)
[»] scaffold0163 (1 HSPs)
scaffold0163 (366-473)||(1967-2074)
[»] scaffold0013 (1 HSPs)
scaffold0013 (398-489)||(94240-94333)
[»] scaffold0118 (1 HSPs)
scaffold0118 (360-473)||(14473-14585)
[»] scaffold0595 (2 HSPs)
scaffold0595 (422-473)||(5797-5848)
scaffold0595 (359-390)||(5731-5762)
[»] scaffold0018 (1 HSPs)
scaffold0018 (398-472)||(138306-138380)


Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 40584245 - 40584485
Alignment:
Q  13 aggatccactcttttctacgtttatgtaaaaatcggagaattaacttttttcaaatacacatgaacaattagttgagagttggggttagattgaagtaga 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40584245 aggatccactcttttctacgtttatgtaaaa-tcggagaattaacttttttcaaatacacatgaacaattagttgagagttggggttagattgaagtaga 40584343  T
Q  113 atggtaaatgaaaaattggtatttgcatggatgagaaatcggtatttgagagaggtcaagtctattattgatgaaagctcgtggaaggagagaaaatgtt 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40584344 atggtaaatgaaaaattggtatttgcatggctgagaaatcggtatttgagagaggtcaagtctattattgatgaatgctcgtggaaggagagaaaatgtt 40584443  T
Q  213 tatctttctcatatgtaaaataaatattacatagagatgtaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40584444 tatctttctcatatgtaaaataaatattacatagagatgtaa 40584485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 494 - 585
Target Start/End: Original strand, 40584557 - 40584648
Alignment:
Q  494 tattttaaattccctatttaggtgatttagttctatattgacgatatttttctgtcacgaaaaatttcatcgagccacatgcatgattttat 585  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40584557 tattttaaattccctatttaggtgattcagttctatattgacgatatttttctgtcacgaaaaatttcatcgagccacatgcatgattttat 40584648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 15882230 - 15882344
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  15882230 ctttttgtatggttcttaactaaaaatacatatttttttggatataactaactttgagaatattatggatttgagaaaatcatggtgaatttagttaaga 15882329  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  15882330 accatacgaaaagca 15882344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 40891044 - 40891156
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  40891044 ttttcgtacggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 40891142  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  40891143 ccatacgaaaagca 40891156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 500
Target Start/End: Original strand, 38629504 - 38629652
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  38629504 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 38629602  T
Q  459 accatatgaa--------aagcaattgtacctaagttttctcctatttta 500  Q
    |||||| |||        ||| ||||||||||||||||||||||| ||||    
T  38629603 accatacgaaaaacacctaaggaattgtacctaagttttctcctaattta 38629652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 29781100 - 29780987
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| |    
T  29781100 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaa 29781002  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  29781001 accatacgaaaagca 29780987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 37114268 - 37114372
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||| ||||||||||||       |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  37114268 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 37114366  T
Q  459 accata 464  Q
    ||||||    
T  37114367 accata 37114372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 17426771 - 17426656
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  17426771 cttttcgtatggttcttaactaaaaatgtatattttttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaag 17426672  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  17426671 aaccatacgaaaagca 17426656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 23940946 - 23940832
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||| |||||||||||||||||         |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  23940946 cttttcgtatggtttttaactaaaaatacatatttttttaaatataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaaga 23940847  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  23940846 atcatacgaaaagca 23940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 38520048 - 38520161
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |    
T  38520048 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaa 38520146  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  38520147 aacatacgaaaagca 38520161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 12234496 - 12234610
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaa-ctttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||| ||||     
T  12234496 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaat 12234594  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  12234595 aaccatacgaaaagca 12234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 4262077 - 4262004
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  4262077 atataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacgaaaagca 4262004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 358 - 464
Target Start/End: Original strand, 38405167 - 38405273
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| | |||| ||||||||||  |||||||| |||||    
T  38405167 actttttgtatggttcttaactaaaaatacatctttttttggatataacaaactttgagaaaattacgaatttaagaaaatcattatgaatttagttaag 38405266  T
Q  458 aaccata 464  Q
    |||||||    
T  38405267 aaccata 38405273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 24741963 - 24741851
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||         | |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  24741963 ttttcgtatggttcttaactaaaaatacac-ctatgttgcatataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaa 24741865  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  24741864 ccatacgaaaagca 24741851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 11828698 - 11828627
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  11828698 gatataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 11828627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 24211419 - 24211272
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||| || |||||||||       | |||||||||||| ||||||||||||||| || || |||| | |||||||||||||||||    
T  24211419 cttttcgtatggttcttaaatagaaatacatattttttag-atataacaaactatgagaaaattatggaattaaggaaattacggtgaatttaattaaga 24211321  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctcctatttt 499  Q
    |||||| |||||||        |||||||||||||||||||||| ||||    
T  24211320 accatacgaaaagcacctaaagaattgtacctaagttttctcctttttt 24211272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 8210353 - 8210457
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| |||||||||||| ||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||    
T  8210353 cttttcgtatgattcttaactaaatatatatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaaga 8210451  T
Q  459 accata 464  Q
    | ||||    
T  8210452 atcata 8210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 33100786 - 33100673
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||| |||||||||||||||| |||||       | |||||||||||||||||||||||||||||||||| |||| | |||   |||| ||||||    
T  33100786 cttttcgtacggttcttaactaaaaaaacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaaga 33100688  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  33100687 accatacgaaaagca 33100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 14834770 - 14834700
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||||||||||||   ||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||    
T  14834770 atataacaaactttga---aattatgaatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagca 14834700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 473
Target Start/End: Original strand, 35467243 - 35467313
Alignment:
Q  403 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||||||| |||||||||||||||| |  |||||||| |||||||| |||||||||||| ||||||||    
T  35467243 taacaaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaagaaccatacgaaaagca 35467313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 9775297 - 9775226
Alignment:
Q  404 aacaaactttgagaaaattatggatttgagaaaatcatggtgaatt--taattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||  ||||||| || |||| ||||||||    
T  9775297 aacaaactttgagaaaattatgaatttgagaaaattttggtgaatttataattaaaaatcatacgaaaagca 9775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 25264328 - 25264277
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaattta 451  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||||||||    
T  25264328 atataacaaactttaagaaaattatgaatttgaggaaatcattgtgaattta 25264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 40393754 - 40393865
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||| |||| ||||||||||||||||||||       |||||||||||| |||||||||||||   ||||||| |||| ||||||||||||  ||||||    
T  40393754 ttttcttatgattcttaactaaaaatacatatttttg-ggatataacaaattttgagaaaattaaa-atttgaggaaattatggtgaatttagctaagaa 40393851  T
Q  460 ccatatgaaaagca 473  Q
    |||||  |||||||    
T  40393852 ccataataaaagca 40393865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 441
Target Start/End: Original strand, 10778687 - 10778768
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcat 441  Q
    |||||||||||||||||||||||||||||||        || |||||||||||||||||| ||| || ||||||| |||||||    
T  10778687 cttttcgtatggttcttaactaaaaatacat-tttttgtggctataacaaactttgagaagattgtgaatttgaggaaatcat 10778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Complemental strand, 29869973 - 29869938
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaa 436  Q
    |||||||||||||||||||||| |||||||||||||    
T  29869973 tataacaaactttgagaaaattgtggatttgagaaa 29869938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 7959920 - 7959856
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatat 465  Q
    ||||||||||||||||| || ||| ||||| || ||||||| |  |||||| |||||||||||||    
T  7959920 tataacaaactttgagacaactatagattttaggaaatcatagcaaatttagttaagaaccatat 7959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Original strand, 33100675 - 33100703
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  33100675 cttttcgtatggttcttaactaaaaatac 33100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 33390717 - 33390789
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||| ||||||||||||||| || ||||||| ||||| ||   ||||||  ||| ||||||||||||||||    
T  33390717 tataacgaactttgagaaaattgtgaatttgaggaaatcgtgagtaatttagctaaaaaccatatgaaaagca 33390789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 25446279 - 25446393
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25446279 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 25446378  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  25446379 accatacgaaaagca 25446393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 360 - 503
Target Start/End: Complemental strand, 4072414 - 4072262
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  4072414 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 4072315  T
Q  460 ccatatgaaaagc--------aattgtacctaagttttctcct-attttaaat 503  Q
    ||||| |||||||        |||||||||||||||||||||| |||||||||    
T  4072314 ccatacgaaaagcacctaagaaattgtacctaagttttctcctaattttaaat 4072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 334 - 472
Target Start/End: Original strand, 22101170 - 22101307
Alignment:
Q  334 aggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 433  Q
    ||||||||| ||||  |||||||  ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  22101170 aggagaaaacttaggaacaattcg-cttttcgtatggttcttaactaaaaatacatattttgttggatataacaaactttgagaaaattatggatttgag 22101268  T
Q  434 aaaatcatggtgaatttaattaagaaccatatgaaaagc 472  Q
     ||||||| ||||||||| |||||||||||| |||||||    
T  22101269 gaaatcatagtgaatttagttaagaaccatacgaaaagc 22101307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 473
Target Start/End: Complemental strand, 3970633 - 3970519
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  3970633 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaag 3970535  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  3970534 aaccatacgaaaagca 3970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 8831770 - 8831884
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  8831770 cttttcgtatggttctaaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaaga 8831869  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  8831870 accatacgaaaagca 8831884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 10254598 - 10254712
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  10254598 cttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaaga 10254697  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  10254698 accatacgaaaagca 10254712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 21969298 - 21969185
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  21969298 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 21969200  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  21969199 accatacgaaaagca 21969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 21991734 - 21991621
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  21991734 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 21991636  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  21991635 accatacgaaaagca 21991621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 334 - 473
Target Start/End: Original strand, 22176114 - 22176252
Alignment:
Q  334 aggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 433  Q
    ||||||||| ||||  |||||||  ||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||||||||    
T  22176114 aggagaaaacttaggaacaattcg-cttttcgtatggttcttaactaaaaatacatattttgttggatattacaaactttgagaaaattatggatttgag 22176212  T
Q  434 aaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
     ||||||| ||||||||| ||||||||||||  |||||||    
T  22176213 gaaatcatagtgaatttagttaagaaccatacaaaaagca 22176252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 358 - 473
Target Start/End: Complemental strand, 13078305 - 13078191
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  13078305 acttttcgtatgattcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaag 13078207  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  13078206 aaccatacgaaaagca 13078191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 45487829 - 45487972
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  45487829 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 45487927  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  45487928 accatacgaaaagcacctaaggaattgtacctaagttttctccta 45487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 55340434 - 55340324
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  55340434 ttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaa 55340335  T
Q  460 ccatatgaaaa 470  Q
     |||| |||||    
T  55340334 tcatacgaaaa 55340324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 12789637 - 12789749
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  12789637 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaa 12789735  T
Q  460 ccatatgaaaagca 473  Q
    |||||  |||||||    
T  12789736 ccatacaaaaagca 12789749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 12838107 - 12838217
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |    
T  12838107 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaa 12838205  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  12838206 accatacgaaaa 12838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 470
Target Start/End: Complemental strand, 32237535 - 32237425
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  32237535 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaaga 32237437  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  32237436 accatacgaaaa 32237425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 471
Target Start/End: Original strand, 26906484 - 26906595
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  26906484 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 26906582  T
Q  459 accatatgaaaag 471  Q
    |||||| ||||||    
T  26906583 accatacgaaaag 26906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 471
Target Start/End: Complemental strand, 36278897 - 36278786
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  36278897 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 36278799  T
Q  459 accatatgaaaag 471  Q
    |||||| ||||||    
T  36278798 accatacgaaaag 36278786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 10117545 - 10117654
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||     |||||||| ||||||    
T  10117545 cttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaat-----tgaatttagttaaga 10117639  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  10117640 accatacgaaaagca 10117654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 36822901 - 36822758
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||| ||||||||||   |||| ||||||    
T  36822901 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaaga 36822803  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  36822802 accatacgaaaagcagctaaggaattgtacctaagttttctccta 36822758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 43639223 - 43639109
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  43639223 cttttcgtatgattcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaaga 43639124  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  43639123 atcatacgaaaagca 43639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 25488482 - 25488369
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  25488482 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 25488384  T
Q  459 accatatgaaaagca 473  Q
    || ||| ||||||||    
T  25488383 actatacgaaaagca 25488369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 25561041 - 25561154
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  25561041 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 25561139  T
Q  459 accatatgaaaagca 473  Q
    || ||| ||||||||    
T  25561140 actatacgaaaagca 25561154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 35368801 - 35368873
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  35368801 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaa 35368873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 36657574 - 36657431
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  36657574 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 36657476  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  36657475 accatacgaaaagcatctaaggaattgtacctaagttttctccta 36657431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 50099462 - 50099577
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||||| |||| ||||||||||||        |||||||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||    
T  50099462 cttttcgtatggtttttaattaaaaatacatattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaag 50099561  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  50099562 aaccatacgaaaagca 50099577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 404074 - 404188
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| || ||||||||||||| |||       ||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||    
T  404074 cttttcgtatgatttttaactaaaaataaatatttttttggatataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaaga 404173  T
Q  459 accatatgaaaagca 473  Q
    |||||| | ||||||    
T  404174 accatacggaaagca 404188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 469
Target Start/End: Original strand, 43150510 - 43150619
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  43150510 cttttcgtatggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 43150608  T
Q  459 accatatgaaa 469  Q
    | |||| ||||    
T  43150609 atcatacgaaa 43150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 459
Target Start/End: Complemental strand, 45713044 - 45712945
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||    
T  45713044 cttttcgtatggttctaaactaaaaatacatatttttt-ggatataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaaga 45712946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 10017144 - 10017233
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatt 449  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10017144 cttttcatatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatt 10017233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 46679329 - 46679404
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||| |||||||    
T  46679329 ggatttaacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagca 46679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 471
Target Start/End: Complemental strand, 42105523 - 42105413
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||| |||||||||||||||||||||||| |        || |||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  42105523 tttttgtatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaagaaaatcacggtgaatttagttaagaa 42105425  T
Q  460 ccatatgaaaag 471  Q
    ||||| ||||||    
T  42105424 ccataagaaaag 42105413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 5529921 - 5530035
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||| ||||| |  ||||||||||   |||| |||| |    
T  5529921 cttttcgtatggttcttaactaaaaatacatatttttttggatatatcaaactttgagaaaattatagatttaaagaaatcatggtatttttagttaata 5530020  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  5530021 accatacgaaaagca 5530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 39677373 - 39677312
Alignment:
Q  402 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 463  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39677373 ataacaaactttgaaaaaattatgaatttgagaaaatcatagtgaatttaattaagaaccat 39677312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 473
Target Start/End: Complemental strand, 44920776 - 44920674
Alignment:
Q  370 gttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaa 469  Q
    |||||||||||||||||||||       |||||||| ||||||||||||||||||  ||||||||||||||| || |||||| |||||||||||| ||||    
T  44920776 gttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaaccataagaaa 44920678  T
Q  470 agca 473  Q
    ||||    
T  44920677 agca 44920674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 13724128 - 13724016
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||  || |||||||||||||||||       |||||||||||||||||||||||||||| ||||||  |||||||||||||||| | ||||||    
T  13724128 ttttcgtataatttttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaattt-agtaagaa 13724030  T
Q  460 ccatatgaaaagca 473  Q
    |||||  |||||||    
T  13724029 ccatacaaaaagca 13724016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 433
Target Start/End: Complemental strand, 36329321 - 36329248
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgag 433  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  36329321 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgag 36329248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 473
Target Start/End: Complemental strand, 26976936 - 26976870
Alignment:
Q  407 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||| ||||||||    
T  26976936 aaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaactatacgaaaagca 26976870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 471
Target Start/End: Original strand, 26977721 - 26977831
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||||||||| ||||||||||||||||        | ||| || ||||||||||||||||||||||||||| |||||||  | |||||| |||||||    
T  26977721 ttttcgtatggtttttaactaaaaatacatctttttatg-atacaataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaa 26977819  T
Q  460 ccatatgaaaag 471  Q
    ||||||||||||    
T  26977820 ccatatgaaaag 26977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 470
Target Start/End: Complemental strand, 39850486 - 39850375
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactt-tgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||| |||||||||||||||| |||       ||||||||||||||| ||||||||||||||||||||| ||||||||||   |||| |||||    
T  39850486 cttttcgtatgattcttaactaaaaatatatatttttt-ggatataacaaacttgtgagaaaattatggatttgaggaaatcatggtatttttagttaag 39850388  T
Q  458 aaccatatgaaaa 470  Q
    ||||||| |||||    
T  39850387 aaccatacgaaaa 39850375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 10441399 - 10441317
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatg 442  Q
    ||||| ||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||    
T  10441399 cttttggtacggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatg 10441317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 460
Target Start/End: Complemental strand, 44611483 - 44611422
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 460  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  44611483 gatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaac 44611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 464
Target Start/End: Complemental strand, 37506266 - 37506164
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||| ||||||||||||||||||||||        ||| |||||||||||||||||||||||| |||| |||||||||| || |||||| |||||||    
T  37506266 ttttcgtgtggttcttaactaaaaatacat-tttttttggagataacaaactttgagaaaattatgaatttaagaaaatcat-gtaaatttagttaagaa 37506169  T
Q  460 ccata 464  Q
    |||||    
T  37506168 ccata 37506164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 157069 - 157008
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaacc 461  Q
    |||||||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||    
T  157069 atataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaagaacc 157008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 1476692 - 1476579
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| ||||||||||||||||||||||| |        || |||||||||||||||| |||||||||||| || |||||||||||||||||  | |||    
T  1476692 cttttcatatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaaggaaatcatggtgaatttaggttaga 1476594  T
Q  459 accatatgaaaagca 473  Q
    ||||||  |||||||    
T  1476593 accataccaaaagca 1476579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 38125319 - 38125242
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 438  Q
    |||||||||||||||||||||||||||||||       | |||||||||||||| |||||||||||||||| |||||||    
T  38125319 ttttcgtatggttcttaactaaaaatacatatttttt-gtatataacaaactttaagaaaattatggatttaagaaaat 38125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 49984001 - 49984060
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||| ||| ||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaa 49984060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 297638 - 297565
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||| |||||||||||||||||| |||||||  | || ||||||  ||||||||||| ||||||||    
T  297638 atataacaaactatgagaaaattatggatttcagaaaattgtagtaaatttagctaagaaccatacgaaaagca 297565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 46222124 - 46222059
Alignment:
Q  405 acaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||  |||||||||||| |||| |||||||||||||||||||| |||| ||||||| |||||    
T  46222124 acaaactaagagaaaattatgaatttaagaaaatcatggtgaatttagttaaaaaccatacgaaaa 46222059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 32363122 - 32363188
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||||||||| ||| | |||||||||||||||||||||| || || |||||| |||| |||||||    
T  32363122 ggatataacaaatttttaaaaaattatggatttgagaaaattattgtaaatttagttaataaccata 32363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 46664207 - 46664284
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 438  Q
    ||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||| ||||||| ||||    
T  46664207 ttttcgtatagttcttaactaaaaatacatattttttta-atataacaaactttgagaaaattatgaatttgaggaaat 46664284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 22101217 - 22101161
Alignment:
Q  448 tttaattaagaaccatatgaaaagc-aattgtacctaagttttctcctattttaaat 503  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||||||| ||||||    
T  22101217 tttagttaagaaccatacgaaaagcgaattgttcctaagttttctcctatattaaat 22101161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 37536941 - 37537004
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||||||||||||||||||||||||| ||| |||| ||    |||||| ||||||||||||    
T  37536941 tataacaaactttgagaaaattatggattagaggaaattataaataatttagttaagaaccata 37537004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 390
Target Start/End: Original strand, 32362892 - 32362922
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacata 390  Q
    |||||||||||||||||||||||||||||||    
T  32362892 ttttcgtatggttcttaactaaaaatacata 32362922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 468
Target Start/End: Complemental strand, 51579065 - 51579000
Alignment:
Q  403 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa 468  Q
    ||||||||||  | |||||||||||||||||||||| |||   | |||| ||||||||||||||||    
T  51579065 taacaaacttcaaaaaaattatggatttgagaaaattatgtatagtttagttaagaaccatatgaa 51579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 22176161 - 22176113
Alignment:
Q  448 tttaattaagaaccatatgaaaagc-aattgtacctaagttttctccta 495  Q
    |||| |||||||||||| ||||||| |||||| ||||||||||||||||    
T  22176161 tttagttaagaaccatacgaaaagcgaattgttcctaagttttctccta 22176113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Original strand, 35368579 - 35368607
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  35368579 cttttcgtatggttcttaactaaaaatac 35368607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Original strand, 36822790 - 36822818
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  36822790 cttttcgtatggttcttaactaaaaatac 36822818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 330 - 470
Target Start/End: Original strand, 13439690 - 13439836
Alignment:
Q  330 ttaaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaatta 423  Q
    ||||||||||||| |||| |||||||||      ||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||    
T  13439690 ttaaaggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaaaatacatatttttttggatataacaaactttgagaaaatta 13439789  T
Q  424 tggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  13439790 tggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 15546663 - 15546775
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15546663 tttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 15546761  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  15546762 ccatacgaaaagca 15546775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 336 - 473
Target Start/End: Original strand, 8091063 - 8091205
Alignment:
Q  336 gagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatt 429  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatt 8091161  T
Q  430 tgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    | || |||||| |||||||||| |||||||||||| ||||||||    
T  8091162 taaggaaatcacggtgaatttagttaagaaccatacgaaaagca 8091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 885415 - 885558
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  885415 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaaga 885513  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    | |||| |||||||        |||||||||||||||||||||||    
T  885514 atcataggaaaagcacctaaggaattgtacctaagttttctccta 885558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 21380082 - 21379939
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  21380082 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 21379984  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  21379983 accatacgaaaagcacctaaggaattgtacctaagttttctccta 21379939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 14393591 - 14393707
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 456  Q
    ||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14393591 cttttcgtatgattcttaactaaaaatacatatttctttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaa 14393690  T
Q  457 gaaccatatgaaaagca 473  Q
    ||||||||  |||||||    
T  14393691 gaaccatacaaaaagca 14393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 4238922 - 4238997
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4238922 ggatataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaagaaccatacaaaaagca 4238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 470
Target Start/End: Complemental strand, 4890654 - 4890511
Alignment:
Q  333 aaggagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgg 426  Q
    ||||||||||||||| |||||||||       ||||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||     
T  4890654 aaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaacgcatatttttttggatataacaaactttgagaaaattatga 4890555  T
Q  427 atttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||| |||||||||| |||||| |||||||||||| |||||    
T  4890554 atttgaggaaatcatggtaaatttagttaagaaccatacgaaaa 4890511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 11687284 - 11687137
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  11687284 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 11687186  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctcctatttt 499  Q
    |||||| |||||||        |||||||||||||||||||||||||||    
T  11687185 accatacgaaaagcatctaaggaattgtacctaagttttctcctatttt 11687137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 3369015 - 3369128
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||    
T  3369015 cttttcgtatggttcttaactaaaaatacatatttttt-gaatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttagga 3369113  T
Q  459 accatatgaaaagca 473  Q
    || ||| ||||||||    
T  3369114 acgatacgaaaagca 3369128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 460
Target Start/End: Complemental strand, 18998258 - 18998157
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  18998258 cttttcgtatggttcttaattaaaaatacatattttttttgatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaaga 18998159  T
Q  459 ac 460  Q
    ||    
T  18998158 ac 18998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 464
Target Start/End: Complemental strand, 31764467 - 31764362
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||| ||||||||||||| |||||||       ||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  31764467 acttttcgtatagttcttaactaaagatacatatttttt-ggatacaacaaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaag 31764369  T
Q  458 aaccata 464  Q
    |||||||    
T  31764368 aaccata 31764362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 20501737 - 20501849
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||  ||||||||||   |||| |||||||    
T  20501737 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacttcgagaaaattatggatttgaagaaatcatggtatttttagttaagaa 20501835  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  20501836 ccatacgaaaagca 20501849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 29609031 - 29609144
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||| ||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||| || |||||| |||||||||| |||| |    
T  29609031 cttttcgtgtggttcttaactaaaaatacat-cttttttggagataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaa 29609129  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  29609130 accatacgaaaagca 29609144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 13172713 - 13172605
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||| |||| ||  |||||||| |||||||    
T  13172713 ttttcgtatggttcttaagtaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatgat-atgaatttagttaagaa 13172616  T
Q  460 ccatatgaaaa 470  Q
    ||||| |||||    
T  13172615 ccatacgaaaa 13172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 7808640 - 7808752
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||| ||||| |||||||||||||||||       ||||||||||||||||||||||||||| |||||||| ||||||||||   |||| |||||||    
T  7808640 ttttcgtttggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaa 7808738  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  7808739 ccatacgaaaagca 7808752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 501
Target Start/End: Original strand, 17279601 - 17279703
Alignment:
Q  404 aacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa-----aagcaattgtacctaagttttctcctattt 498  Q
    |||||||||||| ||||||||| ||||||  |||||||| |||||||| |||||||| ||| |||     ||| |||||||||||||||||||||||| |    
T  17279601 aacaaactttgataaaattatgaatttgaagaaatcatgatgaatttagttaagaactatacgaacacctaagaaattgtacctaagttttctcctatat 17279700  T
Q  499 taa 501  Q
    |||    
T  17279701 taa 17279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 473
Target Start/End: Original strand, 6433751 - 6433800
Alignment:
Q  424 tggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  6433751 tggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagca 6433800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 30905046 - 30905110
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||| |||||||||||||||||| |||||||| | |||| | |||||||| |||| |||||||    
T  30905046 atataaaaaactttgagaaaattatagatttgagtagatcacgatgaatttagttaaaaaccata 30905110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 17367158 - 17367117
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcat 441  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcat 17367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Complemental strand, 34522363 - 34522322
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatc 439  Q
    |||||||||||||||| ||||||||||| |||| ||||||||    
T  34522363 ggatataacaaactttaagaaaattatgaatttaagaaaatc 34522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 7187633 - 7187705
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||| |||||||||||||| |||| ||||||| ||||||||||  ||||| |||| ||| |||  |||||||    
T  7187633 tataataaactttgagaaaaatatgaatttgagtaaatcatggtttatttagttaataactatacaaaaagca 7187705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 7808750 - 7808722
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  7808750 cttttcgtatggttcttaactaaaaatac 7808722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 20501847 - 20501819
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  20501847 cttttcgtatggttcttaactaaaaatac 20501819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 359 - 496
Target Start/End: Original strand, 1298942 - 1299086
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1298942 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 1299040  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctcctat 496  Q
    |||||| |||||||        ||||||||||||||||||||||||    
T  1299041 accataagaaaagcacctaaggaattgtacctaagttttctcctat 1299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 499
Target Start/End: Complemental strand, 42274633 - 42274486
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  42274633 ttttcgtatggttcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 42274534  T
Q  460 ccatatgaaaagc--------aattgtacctaagttttctcctatttt 499  Q
    ||||| |||||||        |||||||||||||||||||||| ||||    
T  42274533 ccatacgaaaagcatctaaggaattgtacctaagttttctcctttttt 42274486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 496
Target Start/End: Original strand, 18417687 - 18417831
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18417687 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttaattaaga 18417785  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctcctat 496  Q
    ||||||  ||||||        ||||||||||||||||||||||||    
T  18417786 accatacaaaaagcacctaaggaattgtacctaagttttctcctat 18417831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 473
Target Start/End: Complemental strand, 21048854 - 21048733
Alignment:
Q  349 tacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaat 448  Q
    ||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  21048854 tacaattcc-cttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaacttcgagaaaattatggatttgaggaaatcatggtgaat 21048758  T
Q  449 ttaattaagaaccatatgaaaagca 473  Q
    ||| |||||||||||| ||||||||    
T  21048757 ttagttaagaaccatacgaaaagca 21048733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 530810 - 530697
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  530810 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaaga 530712  T
Q  459 accatatgaaaagca 473  Q
    ||||||  |||||||    
T  530711 accatacaaaaagca 530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 20435281 - 20435168
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||    
T  20435281 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 20435183  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  20435182 accatacgaaaagca 20435168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 24915897 - 24915822
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  24915897 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagca 24915822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 35360707 - 35360816
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  35360707 ttttcgtatggttcttaactaaaaatacatattttttag-atataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 35360805  T
Q  460 ccatatgaaaa 470  Q
    ||||| |||||    
T  35360806 ccatacgaaaa 35360816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 13204406 - 13204518
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||| ||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||     
T  13204406 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaa 13204504  T
Q  458 aaccatatgaaaag 471  Q
    ||||||| ||||||    
T  13204505 aaccatacgaaaag 13204518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 4688388 - 4688275
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||| || ||||||| ||||||  ||||||||| |||||||    
T  4688388 ttttcgtatggttcttaattaaaaatacatatttttttggatataacaaactttgagaaaattgtgaatttgaggaaatcacagtgaatttagttaagaa 4688289  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  4688288 ccatacgaaaagca 4688275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 24969685 - 24969569
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 456  Q
    |||||||||| ||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  24969685 cttttcgtatagttcttaactaaaaatacatttttttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaa 24969586  T
Q  457 gaaccatatgaaaagca 473  Q
    |||||||| ||||||||    
T  24969585 gaaccatacgaaaagca 24969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 32318823 - 32318748
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||    
T  32318823 ggatataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaaccatacgaaaagca 32318748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 55107554 - 55107701
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||| |||||| | ||||    
T  55107554 cttttcatatggttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaaga 55107652  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctcctatttt 499  Q
    ||||||  ||||||        |||||||||||||||||||||| ||||    
T  55107653 accatacaaaaagcacctaaggaattgtacctaagttttctcctttttt 55107701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 4552815 - 4552919
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| ||||||| ||||||||||||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  4552815 cttttcatatggtttttaactaaaaataaatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 4552913  T
Q  459 accata 464  Q
    ||||||    
T  4552914 accata 4552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 23928670 - 23928567
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaa-------aagcaattgtacctaagttttc 490  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||       ||| ||||||||||||||||||    
T  23928670 ggatataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaaacactaaggaattgtacctaagttttc 23928571  T
Q  491 tcct 494  Q
    ||||    
T  23928570 tcct 23928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 27434640 - 27434753
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| |||| ||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||| |||| ||||| |||||| ||||||    
T  27434640 ctttttgtatagttcttaactaaaaatacat-tttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaaga 27434738  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  27434739 accatacgaaaagca 27434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 56552132 - 56552204
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| || |||||    
T  56552132 tataacaaactttgagaaaattatggatttgaggaaatcatggttaatttatttaagaaccatacgataagca 56552204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 407 - 499
Target Start/End: Complemental strand, 3422523 - 3422423
Alignment:
Q  407 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcctattt 498  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||| |||||||        ||||||||||||||||||||||||||    
T  3422523 aaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcctattt 3422424  T
Q  499 t 499  Q
    |    
T  3422423 t 3422423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 402 - 473
Target Start/End: Complemental strand, 9355652 - 9355581
Alignment:
Q  402 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||| | |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  9355652 ataacaaattctgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagca 9355581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 24294497 - 24294607
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| ||||||| ||||||||||||       | |||||||||||||||||||||||| | ||||||| |||| |||||||||||| ||||||    
T  24294497 cttttcgtatgattcttaattaaaaatacatatttttttg-atataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaaga 24294595  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  24294596 accatacgaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 28809988 - 28809901
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaa 447  Q
    ||||| |||||||||||||||| |||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28809988 cttttggtatggttcttaactagaaatacatatttttt-ggatataacaaattttgagaaaattatggatttgagaaaatcatggtgaa 28809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 2272434 - 2272509
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||| |||||||||||| |||||||||||||| || |||||||||||||||||  ||||||||||| ||||||||    
T  2272434 ggatagaacaaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaaccatacgaaaagca 2272509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 492
Target Start/End: Original strand, 4895003 - 4895134
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag-a 458  Q
    |||| |||| |||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||| |    
T  4895003 tttttgtatagttcttaactaaaaatacatatttttt-gaatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaa 4895101  T
Q  459 accatatgaaaagcaattgtacctaagttttctc 492  Q
    |||||| ||||| | | ||||| |||||||||||    
T  4895102 accatacgaaaatc-actgtacataagttttctc 4895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 55049503 - 55049428
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||| |||||||||| |||||| ||||||| ||||||||| |||||||| ||| ||||||||    
T  55049503 ggatataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagca 55049428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 16995656 - 16995585
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  16995656 gatataacaaactctgaaaaaatgatgggtttgagaaaatcatgttgaatttaattaaaaaccatacgaaaa 16995585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 438
Target Start/End: Original strand, 52824269 - 52824347
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaat 438  Q
    ||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||| ||||    
T  52824269 cttttcgtatggttcttaactaaaaatacatatttttta-gatataataaactttgagaaaattatggatttgaggaaat 52824347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 19601039 - 19600971
Alignment:
Q  402 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||| || ||||||||||| | |||||||||| |||||||||||| |||||||| ||||    
T  19601039 ataacaaactttgaaaatattatggatttaacaaaatcatggcgaatttaattaaaaaccatataaaaa 19600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 428 - 471
Target Start/End: Complemental strand, 43486273 - 43486230
Alignment:
Q  428 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 471  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  43486273 tttgagaaaatcatggtgaatttagttaagaaccataggaaaag 43486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 52587417 - 52587383
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgag 433  Q
    |||||||||||||||||||||||||||||||||||    
T  52587417 gatataacaaactttgagaaaattatggatttgag 52587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 36031031 - 36030998
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgag 433  Q
    ||||||||||||||||||||||||||||||||||    
T  36031031 atataacaaactttgagaaaattatggatttgag 36030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 473
Target Start/End: Complemental strand, 47452910 - 47452838
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||| | ||||||| |||||||||| ||| |||||  | || | |||||||||||||||||||||    
T  47452910 tataacaaacttcgggaaaattgtggatttgaggaaaacatgggtagttaagttaagaaccatatgaaaagca 47452838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 23482022 - 23481962
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 460  Q
    |||||||||| |||||||||||||| ||||| | || |||||  | |||||||||||||||    
T  23482022 atataacaaattttgagaaaattatagatttaaaaacatcataataaatttaattaagaac 23481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 5e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 499
Target Start/End: Complemental strand, 1924121 - 1923974
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  1924121 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 1924022  T
Q  460 ccatatgaaaagc--------aattgtacctaagttttctcctatttt 499  Q
    ||||| |||||||        |||||||||||||||||||||| ||||    
T  1924021 ccatacgaaaagcacctaagaaattgtacctaagttttctcctttttt 1923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 359 - 494
Target Start/End: Complemental strand, 9933710 - 9933569
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9933710 cttttcgtatggttcttaactaaaaatacatattttttag-atataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 9933612  T
Q  459 accatatgaaaagc-------aattgtacctaagttttctcct 494  Q
    |||||| |||||||       ||||||||||||||||||||||    
T  9933611 accataggaaaagcactaatgaattgtacctaagttttctcct 9933569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 3116906 - 3117019
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  3116906 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaaga 3117004  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  3117005 accatacgaaaagca 3117019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 45408656 - 45408768
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45408656 tttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 45408754  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  45408755 ccatacgaaaagca 45408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 359 - 470
Target Start/End: Complemental strand, 42713919 - 42713808
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||| ||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42713919 cttttcgcatgattcttaactaaaaatacatatttttttggatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 42713820  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  42713819 accatacgaaaa 42713808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 24101973 - 24101860
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  24101973 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaaga 24101875  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  24101874 accatacgaaaagca 24101860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 471
Target Start/End: Original strand, 23835906 - 23836018
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||| |    
T  23835906 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaattttgttaaaa 23836005  T
Q  459 accatatgaaaag 471  Q
    |||||| ||||||    
T  23836006 accatacgaaaag 23836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 471
Target Start/End: Complemental strand, 9281488 - 9281377
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  9281488 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 9281390  T
Q  459 accatatgaaaag 471  Q
    |||||||||||||    
T  9281389 accatatgaaaag 9281377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 2818696 - 2818806
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| ||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2818696 cttttcgtatgattcttaactaaaaatacatatttttt-ggatatatcaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 2818794  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  2818795 accatacgaaaa 2818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 9850897 - 9850786
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  9850897 ttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaagaa 9850800  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  9850799 ccatacgaaaagca 9850786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 16705763 - 16705876
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||| |    
T  16705763 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgataaaattatggctttgagaaaatcatagtgaatttagttaaaa 16705861  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  16705862 accatacgaaaagca 16705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 27920602 - 27920715
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||| |||||||||||| ||||||       |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  27920602 cttttcgtatgggtcttaactaaaactacatatttttt-ggatataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaaga 27920700  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  27920701 accatacgaaaagca 27920715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 12850683 - 12850579
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |    
T  12850683 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaaaa 12850585  T
Q  459 accata 464  Q
    ||||||    
T  12850584 accata 12850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 497
Target Start/End: Original strand, 34490487 - 34490631
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||| ||||||||||   |||| |||||||    
T  34490487 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaa 34490585  T
Q  460 ccatatgaaaagc--------aattgtacctaagttttctcctatt 497  Q
    ||||| |||||||        |||||||||||||||||||||||||    
T  34490586 ccatacgaaaagcacctaaggaattgtacctaagttttctcctatt 34490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 7737094 - 7737208
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  7737094 cttttggtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaaga 7737193  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  7737194 atcatacgaaaagca 7737208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 34455915 - 34456025
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| ||    
T  34455915 cttttcgtatggttcttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatagatttgaggaaattatgatgaatttaattagga 34456013  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  34456014 accatacgaaaa 34456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 20892914 - 20893028
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  |||| || ||   |||| ||||||    
T  20892914 cttttcgtatggttcttaactaaaaatacatatttttatggatataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaaga 20893013  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  20893014 atcatacgaaaagca 20893028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 43476014 - 43476086
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||    
T  43476014 ggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 43476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 22269753 - 22269865
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||| || |||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| |||||||    
T  22269753 ttttcgtatgatttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgttttttttagttaagaa 22269851  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  22269852 ccatacgaaaagca 22269865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 470
Target Start/End: Complemental strand, 29229506 - 29229394
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaacttt-gagaaaattatggatttgagaaaatcatggtgaatttaattaa 456  Q
    |||||||||||||||||||||||||||||||||       |||||||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||    
T  29229506 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaa 29229408  T
Q  457 gaaccatatgaaaa 470  Q
    ||| |||| |||||    
T  29229407 gaatcatacgaaaa 29229394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 470
Target Start/End: Complemental strand, 29342806 - 29342694
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaacttt-gagaaaattatggatttgagaaaatcatggtgaatttaattaa 456  Q
    |||||||||||||||||||||||||||||||||       |||||||| ||||||| |||||||||||||||||||| |||||||| ||||| || ||||    
T  29342806 acttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaa 29342708  T
Q  457 gaaccatatgaaaa 470  Q
    ||| |||| |||||    
T  29342707 gaatcatacgaaaa 29342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 40362553 - 40362622
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  40362553 atataacaaactatgagaaaattatg-atttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 40362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 473
Target Start/End: Original strand, 6605777 - 6605877
Alignment:
Q  371 ttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| | |||||||||||  ||||    
T  6605777 ttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaattt-agtaagaaccatacaaaaa 6605874  T
Q  471 gca 473  Q
    |||    
T  6605875 gca 6605877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 358 - 470
Target Start/End: Original strand, 7116399 - 7116510
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||||||||| |||||||||||||         ||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||| |||||    
T  7116399 acttttcgtatggttctcaactaaaaatacac-ctttgttggatagaacaatctttgagaaaattatggatttgatgaaattatggtaaatttatttaag 7116497  T
Q  458 aaccatatgaaaa 470  Q
    ||||||| |||||    
T  7116498 aaccatacgaaaa 7116510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 17500107 - 17500037
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||||| ||||| | ||||||||||| || |  ||||||||| |||||||||||| |||||    
T  17500107 atataacaaactttgaaaaaataaaggatttgagaagattaccgtgaatttagttaagaaccatacgaaaa 17500037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 17434770 - 17434728
Alignment:
Q  428 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||| |||||||||||| |||||||||||| |||||    
T  17434770 tttgagaaaattatggtgaatttagttaagaaccatacgaaaa 17434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 502
Target Start/End: Complemental strand, 3116896 - 3116867
Alignment:
Q  473 aattgtacctaagttttctcctattttaaa 502  Q
    ||||||||||||||||||||||||||||||    
T  3116896 aattgtacctaagttttctcctattttaaa 3116867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 17434821 - 17434755
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgg 426  Q
    |||||||||| |||||||||||| | | |||       |||||||||||||||||||||||||||||    
T  17434821 ttttcgtatgattcttaactaaataaatatatttttttggatataacaaactttgagaaaattatgg 17434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 34490597 - 34490569
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  34490597 cttttcgtatggttcttaactaaaaatac 34490569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 15324656 - 15324770
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  15324656 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 15324755  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  15324756 accatacgaaaagca 15324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 47940711 - 47940598
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  47940711 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 47940612  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  47940611 ccatacgaaaagca 47940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 9978193 - 9978079
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  9978193 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 9978094  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  9978093 atcatacgaaaagca 9978079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 27241065 - 27240922
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||| ||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27241065 ctttgcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 27240967  T
Q  459 accatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    |||||| |||||||        |||||||||||||||||||||||    
T  27240966 accatacgaaaagcacctaaggaattgtacctaagttttctccta 27240922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 5189499 - 5189612
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  5189499 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 5189597  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  5189598 accatacgaaaagca 5189612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 358 - 473
Target Start/End: Complemental strand, 19955053 - 19954939
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  19955053 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 19954955  T
Q  458 aaccatatgaaaagca 473  Q
    ||| ||| ||||||||    
T  19954954 aactatacgaaaagca 19954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 3607870 - 3607757
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  3607870 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 3607772  T
Q  459 accatatgaaaagca 473  Q
    ||||||  |||||||    
T  3607771 accatacaaaaagca 3607757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 333 - 470
Target Start/End: Original strand, 957596 - 957729
Alignment:
Q  333 aaggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttga 432  Q
    ||||||||||||||| |||||     ||||||||||| ||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  957596 aaggagaaaatttaggtacaag----cttttcgtatgattcttaactaaaattacatattttttttgatataacaaactttgagaaaattatggatttga 957691  T
Q  433 gaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||||||||||| ||||||| |||| |||||    
T  957692 gaaaatcatggtgaatttagttaagaatcatacgaaaa 957729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 469
Target Start/End: Complemental strand, 14387155 - 14387047
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  14387155 ttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 14387057  T
Q  460 ccatatgaaa 469  Q
    ||||| ||||    
T  14387056 ccatacgaaa 14387047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 6079415 - 6079526
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||| ||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  6079415 ttttcgtacggttcttcactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 6079513  T
Q  460 ccatatgaaaagc 472  Q
    ||||| |||||||    
T  6079514 ccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 471
Target Start/End: Complemental strand, 48954355 - 48954244
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  48954355 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 48954257  T
Q  459 accatatgaaaag 471  Q
    |||||||||||||    
T  48954256 accatatgaaaag 48954244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 50162680 - 50162532
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |    
T  50162680 ctttttgtatggttcttaactaaaattacatatttttttggatataacaaactttgagaaaattatagatttgagaaaatcacggtgaatttaattaaaa 50162581  T
Q  459 accatatgaa--------aagcaattgtacctaagttttctcctatttt 499  Q
    ||||||  ||        ||| |||||||||||||||||||||||||||    
T  50162580 accatacaaaaaatacctaaggaattgtacctaagttttctcctatttt 50162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 26208454 - 26208568
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||  |||| |||||||||||| || |||    
T  26208454 cttttcgtatggttctcaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcaga 26208553  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  26208554 accatacgaaaagca 26208568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 42561436 - 42561323
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  42561436 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaaga 42561338  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  42561337 accatacgaaaagca 42561323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 496
Target Start/End: Complemental strand, 4299535 - 4299403
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnn--ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  4299535 ttttcgtatggttcttaactaaaaatacatatttttttttggatataacaaactttgagaaaattatggatttgaggaaataatggtgaatttagttaag 4299436  T
Q  458 aaccatatgaaaagcaattgtacctaagttttctcctat 496  Q
    | ||||| |||||      ||||||||||||||||||||    
T  4299435 agccatacgaaaa------gtacctaagttttctcctat 4299403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 471
Target Start/End: Complemental strand, 2854673 - 2854562
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  2854673 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 2854575  T
Q  459 accatatgaaaag 471  Q
    |||||| ||||||    
T  2854574 accatacgaaaag 2854562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 471
Target Start/End: Complemental strand, 23698643 - 23698532
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  23698643 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaaga 23698545  T
Q  459 accatatgaaaag 471  Q
    |||||| ||||||    
T  23698544 accatacgaaaag 23698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 27928438 - 27928326
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||| |||||||    
T  27928438 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagtgaatttagttaagaa 27928340  T
Q  460 ccatatgaaaagca 473  Q
    |||||  |||||||    
T  27928339 ccatacaaaaagca 27928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 50627161 - 50627274
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  50627161 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 50627259  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  50627260 accatacgaaaagca 50627274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 27926393 - 27926279
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||| |||||    
T  27926393 cttttcgtatggttcttaactaaaaatacatattttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagtgaatttagttaag 27926295  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  27926294 aaccatacgaaaagca 27926279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 2125211 - 2125098
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||  |||| | |||||||||||||||||| ||||||    
T  2125211 cttttcgtatagttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaaga 2125113  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  2125112 accatacgaaaagca 2125098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 1387808 - 1387921
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||| ||||||||||   |||| ||||||    
T  1387808 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaaga 1387906  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  1387907 accatacgaaaagca 1387921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 19797122 - 19797009
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||||||| ||||||||||   |||| |||| |    
T  19797122 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgaaaaaattatggatttgaggaaatcatggtatttttagttaaaa 19797024  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  19797023 accatacgaaaagca 19797009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 40647146 - 40647291
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||| |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||     
T  40647146 cttttcgtgtggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaa 40647245  T
Q  458 aaccatatgaaaagc--------aattgtacctaagttttctccta 495  Q
    || |||| |||||||        |||||||||||||||||||||||    
T  40647246 aatcatacgaaaagcacctaaggaattgtacctaagttttctccta 40647291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 49284397 - 49284331
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  49284397 ggatataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 49284331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 21930411 - 21930518
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||   |||   |||||||||||| |||||||    
T  21930411 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttaagaaaattatggattt---aaagaaatggtgaatttagttaagaa 21930507  T
Q  460 ccatatgaaaa 470  Q
    ||||| |||||    
T  21930508 ccatacgaaaa 21930518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 504
Target Start/End: Complemental strand, 51789736 - 51789586
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||| ||||         ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||| |    
T  51789736 cttttcgtatggttcttaactaaaaacacatttttta---gatataacatactttgagaaaattatggaattgaggaaatcatggtgaatttagttaaaa 51789640  T
Q  459 accatatgaa--------aagcaattgtacctaagttttctcctattttaaatt 504  Q
    |||||| |||        ||| |||||||||||||||||||||| ||| |||||    
T  51789639 accatacgaaaatcacctaaggaattgtacctaagttttctcctttttaaaatt 51789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 9895282 - 9895367
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggt 444  Q
    |||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| ||||||||||    
T  9895282 acttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatgtatttgaggaaatcatggt 9895367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 51276796 - 51276723
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||| ||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||| ||||||||    
T  51276796 atataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaaccatacgaaaagca 51276723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 403 - 495
Target Start/End: Original strand, 36880584 - 36880684
Alignment:
Q  403 taacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcct 494  Q
    ||||||||||||||||||||||||||||||| ||||||||||   |||| |||||||||||| |||||||        ||||||||||||||||||||||    
T  36880584 taacaaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T
Q  495 a 495  Q
    |    
T  36880684 a 36880684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 365 - 473
Target Start/End: Original strand, 27670179 - 27670286
Alignment:
Q  365 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||| ||||||||||||||||||||       | |||||| |||||||||||||||||||||||| || |||||||| |||||||| |||| |||||||    
T  27670179 gtatgattcttaactaaaaatacatatttttt-gaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaaccata 27670277  T
Q  465 tgaaaagca 473  Q
     ||||||||    
T  27670278 cgaaaagca 27670286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 48645154 - 48645042
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||| ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  48645154 cttttcgta-ggttcttaactaaaaatacatattttttag-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 48645057  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  48645056 agcatacgaaaagca 48645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 50856424 - 50856349
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||  |||||| |||| ||||||||    
T  50856424 ggatataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaagca 50856349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 29598393 - 29598450
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||| |||||    
T  29598393 atataacaaactttgagaaaattatggatttaaggaaatcatagtgaatttagttaag 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 5059664 - 5059604
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||||||||||||| |||||||||||||| | ||||| ||||| ||||||||||||||    
T  5059664 gatataacaaactttgataaaattatggatttaaaaaaattatggtaaatttaattaagaa 5059604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 22339125 - 22339023
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| |||||||||||||||||||||||         ||||| |||| ||||||||||||| ||||||||||  |||||||||||| |||| ||||||    
T  22339125 cttttcatatggttcttaactaaaaatacac-ctttgttggatagaacagactttgagaaaatgatggatttgatgaaatcatggtgagtttagttaaga 22339027  T
Q  459 acca 462  Q
    ||||    
T  22339026 acca 22339023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 2302481 - 2302533
Alignment:
Q  408 aactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 460  Q
    |||||||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  2302481 aactttgagaaaattatgaatttgaggaaatcatggtgaattttgttaagaac 2302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 36007920 - 36007860
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaacc 461  Q
    ||||||||||||||||||||||||| ||||||| |||||||||  | |||| |||||||||    
T  36007920 tataacaaactttgagaaaattatgtatttgaggaaatcatggatagtttagttaagaacc 36007860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 35547803 - 35547728
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||| |||||||  |||||||||||||||| |  |||| ||||||| |||| ||||||||||||| |||||||    
T  35547803 ggatatatcaaacttatagaaaattatggatttaaagaaattatggtgattttagttaagaaccatataaaaagca 35547728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 430
Target Start/End: Original strand, 28243997 - 28244058
Alignment:
Q  368 tggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggattt 430  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  28243997 tggttcttaactaaaaatacat-cttttttggatataacaaactttgagaaaattatggattt 28244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 39015293 - 39015225
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaa 469  Q
    |||||| |||||||||||||||||||||||||  |||||||||| | || | | |||||||||| ||||    
T  39015293 tataacgaactttgagaaaattatggatttgaagaaatcatggttagttaattaaagaaccatacgaaa 39015225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 42010501 - 42010437
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||||||||||   |||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  42010501 atataacaaactttcgaaaaattatgattttaagaaaatcatggtaaatttaattaaaaaccata 42010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 390
Target Start/End: Complemental strand, 49285116 - 49285085
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacata 390  Q
    ||||||||||||||||||||||||||||||||    
T  49285116 cttttcgtatggttcttaactaaaaatacata 49285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 16518403 - 16518353
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaat 448  Q
    ||||| |||||||| ||||||||||||| | |||||||||| |||||||||    
T  16518403 ggatacaacaaactatgagaaaattatgtaattgagaaaattatggtgaat 16518353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 25559255 - 25559214
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatg 442  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  25559255 tataacaaactctgaaaaaattatgtatttgagaaaatcatg 25559214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 505
Target Start/End: Original strand, 2854683 - 2854715
Alignment:
Q  473 aattgtacctaagttttctcctattttaaattc 505  Q
    |||||||||||||||||||||||| ||||||||    
T  2854683 aattgtacctaagttttctcctatattaaattc 2854715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 18651350 - 18651310
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcat 441  Q
    ||||||||| ||||||||||||||||||||| | |||||||    
T  18651350 tataacaaattttgagaaaattatggatttggggaaatcat 18651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 28447963 - 28447927
Alignment:
Q  428 tttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||||||||||| || |||||||||||||||||||    
T  28447963 tttgagaaaatcatagtaaatttaattaagaaccata 28447927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 36880652 - 36880624
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  36880652 cttttcgtatggttcttaactaaaaatac 36880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 45864 - 45977
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45864 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 45962  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  45963 accataagaaaagca 45977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 30259207 - 30259094
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30259207 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 30259109  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  30259108 accataggaaaagca 30259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 20184380 - 20184266
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20184380 cttttcgtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 20184281  T
Q  459 accatatgaaaagca 473  Q
    | |||| ||||||||    
T  20184280 atcatacgaaaagca 20184266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 24836050 - 24836163
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24836050 cttttcgtatggttctnaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 24836148  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  24836149 accatacgaaaagca 24836163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 30594723 - 30594836
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||| || |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  30594723 cttttcgcatagttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 30594821  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  30594822 accatacgaaaagca 30594836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 34052309 - 34052422
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||    
T  34052309 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaaga 34052407  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  34052408 accatacgaaaagca 34052422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 31231757 - 31231642
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    ||||||||||||||||||||||||||||||||       |  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31231757 cttttcgtatggttcttaactaaaaatacatattttttggacatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 31231658  T
Q  458 aaccatatgaaaagca 473  Q
    |||||||  |||||||    
T  31231657 aaccatacaaaaagca 31231642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 39617983 - 39617839
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||| ||||||||||||||||| |||       |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  39617983 cttttcgtatagttcttaactaaaaataaatatttttttggatataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaaga 39617884  T
Q  459 accatatgaa--------aagcaattgtacctaagttttctccta 495  Q
    |||||| |||        ||| |||||||||||||||||||||||    
T  39617883 accatacgaagaacatctaagaaattgtacctaagttttctccta 39617839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 358 - 473
Target Start/End: Complemental strand, 35339420 - 35339306
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||    
T  35339420 acttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaag 35339322  T
Q  458 aaccatatgaaaagca 473  Q
    ||||||| ||||||||    
T  35339321 aaccatacgaaaagca 35339306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 12142228 - 12142333
Alignment:
Q  365 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||||||||||||||||||| |||       ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  12142228 gtatggttcttaactaaaaatatatatatttttggatataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactata 12142327  T
Q  465 tgaaaa 470  Q
     |||||    
T  12142328 cgaaaa 12142333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 3953184 - 3953072
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaag 457  Q
    |||||| ||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||     
T  3953184 actttttgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaa 3953086  T
Q  458 aaccatatgaaaag 471  Q
    ||||||| ||||||    
T  3953085 aaccatacgaaaag 3953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 473
Target Start/End: Complemental strand, 9285888 - 9285742
Alignment:
Q  332 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 425  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  9285888 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 9285790  T
Q  426 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  9285789 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 9285742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 473
Target Start/End: Complemental strand, 9289955 - 9289809
Alignment:
Q  332 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 425  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  9289955 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 9289857  T
Q  426 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  9289856 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 9289809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 365 - 473
Target Start/End: Complemental strand, 45997643 - 45997536
Alignment:
Q  365 gtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  45997643 gtatggttcttaactaaaaatacatatttttt-ggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccata 45997545  T
Q  465 tgaaaagca 473  Q
      |||||||    
T  45997544 caaaaagca 45997536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 10936611 - 10936498
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||    
T  10936611 cttttcgtatggttcttaactaaaaatacatatttttt-ggttataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaaga 10936513  T
Q  459 accatatgaaaagca 473  Q
    ||| || ||||||||    
T  10936512 accgtacgaaaagca 10936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 38883251 - 38883364
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  38883251 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 38883349  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  38883350 accatacgaaaagca 38883364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 40358146 - 40358258
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||| ||||       | |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  40358146 ttttcgtatggttcttaactaaaaatgcatatttttttg-atataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 40358244  T
Q  460 ccatatgaaaagca 473  Q
     |||| ||||||||    
T  40358245 tcataggaaaagca 40358258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 473
Target Start/End: Complemental strand, 31521628 - 31521553
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||    
T  31521628 ggatataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaagca 31521553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 471
Target Start/End: Original strand, 37093755 - 37093909
Alignment:
Q  322 tttatattttaaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttga 415  Q
    ||||| || ||||||||||||||||| ||||||| |      | |||||||||| ||||||| |||||||| |||       ||||||||||||||||||    
T  37093755 tttattttctaaaggagaaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaaaatatatatttttt-ggatataacaaactttga 37093853  T
Q  416 gaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 471  Q
    |||||||||  ||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  37093854 gaaaattataaatttgaggaaatcatggtgaatttagttaaaaaccatacgaaaag 37093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 39143813 - 39143740
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||| | |||||||||| ||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagca 39143740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 16876559 - 16876487
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  16876559 ggatataacaaactctaagaaaattacggatttgagaaaatcatggtaaatttaagtaagaaccatacgaaaa 16876487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 470
Target Start/End: Complemental strand, 25742572 - 25742466
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||     |||||||| ||||||    
T  25742572 cttttcgtatggttgttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgaggaaat----atgaatttagttaaga 25742478  T
Q  459 accatatgaaaa 470  Q
    |||||| |||||    
T  25742477 accataggaaaa 25742466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 441
Target Start/End: Complemental strand, 24123899 - 24123815
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcat 441  Q
    |||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||    
T  24123899 acttttcgtatggttcttaattaaaaatacatattttttttggatataacaaactttgagaaaattatggatttgaggaaatcat 24123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 328 - 447
Target Start/End: Complemental strand, 38528590 - 38528464
Alignment:
Q  328 ttttaaaggagaaaatttagatacaattcca------cttttcgtatggttcttaactaaaaatacatannnnnnngg-atataacaaactttgagaaaa 420  Q
    ||||||||||||||| |||| |||||||||       ||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  38528590 ttttaaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaa 38528491  T
Q  421 ttatggatttgagaaaatcatggtgaa 447  Q
    ||||||||| ||| || ||||||||||    
T  38528490 ttatggattcgaggaattcatggtgaa 38528464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 33749713 - 33749778
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||| ||||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||    
T  33749713 gatataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaagaaccata 33749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 48103399 - 48103508
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||||||||||  |||||||||||||| ||||||    ||||||| |||||||    
T  48103399 ttttcgtatgattcttaactaaaaatacatatttttt-ggatataacaaactttgagattattatggatttgaggaaatca---cgaatttagttaagaa 48103494  T
Q  460 ccatatgaaaagca 473  Q
    |||||  |||||||    
T  48103495 ccatacaaaaagca 48103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 10398390 - 10398462
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||| |||||| ||||||| |||||||||  |||||| ||||||||||||  |||||||    
T  10398390 tataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagca 10398462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 44148722 - 44148777
Alignment:
Q  405 acaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaac 460  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||||||    
T  44148722 acaaactttgagaaaattatggatttaaggaaatcacagtgaatttaattaagaac 44148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 29277867 - 29277963
Alignment:
Q  358 acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaa 456  Q
    |||||| ||||||||||||||||||||||||         ||||| |||||| |||||||||||| ||||||| || ||||||||||||||||| ||||    
T  29277867 actttttgtatggttcttaactaaaaataca--ctgttttggatacaacaaagtttgagaaaattttggatttaaggaaatcatggtgaatttagttaa 29277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 3910767 - 3910683
Alignment:
Q  69 acacatgaacaatta-gttgagagttggggttagattgaagtagaatggtaaatgaaaaattggtatttgcatggatgagaaatc 152  Q
    ||||||||||||||| ||||||| | | |||| ||||||||||||||||| || | ||| ||||||||||||||| | |||||||    
T  3910767 acacatgaacaattaagttgagaatagcggttggattgaagtagaatggtgaagggaaatttggtatttgcatggtttagaaatc 3910683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 38989173 - 38989102
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||| | |||||| |||| ||| ||| |||||    
T  38989173 gatataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaaaaactatacgaaaa 38989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 47237526 - 47237460
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||||||||||||| ||| ||||       |||||| |||||||||||| ||||||||    
T  47237526 atataacaaactttgagaaaattatggattcgaggaaat-------aatttagttaagaaccataggaaaagca 47237460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 1402990 - 1403032
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatgg 443  Q
    ||||||||| |||||||||||||| |||||||| |||||||||    
T  1402990 tataacaaattttgagaaaattatagatttgaggaaatcatgg 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 25572883 - 25572925
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcatgg 443  Q
    |||||||||||||||||||||||||| |||||  |||||||||    
T  25572883 tataacaaactttgagaaaattatggttttgaagaaatcatgg 25572925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 389
Target Start/End: Complemental strand, 47237569 - 47237539
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacat 389  Q
    |||||||||||||||||||||||||||||||    
T  47237569 cttttcgtatggttcttaactaaaaatacat 47237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 21581240 - 21581183
Alignment:
Q  407 aaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||||  ||||| |||||||| | ||||||||| |||||||| ||||||||||||    
T  21581240 aaactttgcaaaaatcatggatttaaaaaaatcatgatgaatttagttaagaaccata 21581183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 494
Target Start/End: Original strand, 24123875 - 24123918
Alignment:
Q  448 tttaattaagaaccatatgaaaagcaattgtacctaagttttctcct 494  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||    
T  24123875 tttaattaagaaccatacgaaaag---ttgtacctaagttttctcct 24123918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 387
Target Start/End: Original strand, 35665663 - 35665691
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatac 387  Q
    |||||||||||||||||||||||||||||    
T  35665663 cttttcgtatggttcttaactaaaaatac 35665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 1138589 - 1138702
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  1138589 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaaga 1138687  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  1138688 accatacgaaaagca 1138702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 334 - 473
Target Start/End: Complemental strand, 21259902 - 21259758
Alignment:
Q  334 aggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatgga 427  Q
    |||||||||||||| |||||||||      ||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||      
T  21259902 aggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgat 21259804  T
Q  428 tttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  21259803 tttgaggaaatcatggtgaatttaactaagaaccatacgaaaagca 21259758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 24397387 - 24397283
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  24397387 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcat-gtgaatttagttaaga 24397289  T
Q  459 accata 464  Q
    ||||||    
T  24397288 accata 24397283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 20476461 - 20476574
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  20476461 cttttcgtatggttcttaactaaaaatacatatttttgtg-atataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaaga 20476559  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  20476560 accatacgaaaagca 20476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 21261973 - 21262077
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  21261973 cttttcgtatggttcttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaaga 21262071  T
Q  459 accata 464  Q
    ||||||    
T  21262072 accata 21262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 473
Target Start/End: Complemental strand, 33629487 - 33629373
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnn-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||| |||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  33629487 ttttcgtatgattcttaactaaaaatatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatagtgaatttagttaaga 33629388  T
Q  459 accatatgaaaagca 473  Q
    ||||||  |||||||    
T  33629387 accataccaaaagca 33629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 15855873 - 15855986
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  15855873 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 15855971  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  15855972 accatacgaaaagca 15855986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 16472985 - 16473098
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  16472985 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 16473083  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  16473084 accatacgaaaagca 16473098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 473
Target Start/End: Complemental strand, 35420753 - 35420640
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    ||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||| |||||||| |   |||| ||||||    
T  35420753 cttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaaga 35420655  T
Q  459 accatatgaaaagca 473  Q
    |||||| ||||||||    
T  35420654 accatacgaaaagca 35420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 37655316 - 37655192
Alignment:
Q  335 ggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgaga 434  Q
    |||||||| |||| ||||||||  ||||| ||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||||     
T  37655316 ggagaaaacttaggtacaattctgctttttgtatggttcttaactaaaaatacatatttttt--gttataacaaactttgagaaaattatgaatttgagg 37655219  T
Q  435 aaatcatggtgaatttaattaagaacc 461  Q
    || |||||||||||||| |||||||||    
T  37655218 aagtcatggtgaatttagttaagaacc 37655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 4266013 - 4266122
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       |||| ||||||||||| ||||||||||||||||||  |||||| |||||||||| |||||||    
T  4266013 ttttcgtatggttcttaactaaaaatacatatttttt-ggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtgaatttagttaagaa 4266111  T
Q  460 ccatatgaaaa 470  Q
    ||||| |||||    
T  4266112 ccatacgaaaa 4266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 19976292 - 19976405
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||| ||       |||||| | ||||||||||||||||||||||||||| |||||||||| |||||||| || ||    
T  19976292 ttttcgtatggttcttaactaaaaatacgtatttttttggatatgataaactttgagaaaattatggatttgaggaaatcatggtaaatttaatcaataa 19976391  T
Q  460 ccatatgaaaagca 473  Q
    | ||| ||||||||    
T  19976392 ctatacgaaaagca 19976405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 364 - 473
Target Start/End: Complemental strand, 1456158 - 1456050
Alignment:
Q  364 cgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 463  Q
    |||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| |||||||    
T  1456158 cgtatggttcttgactaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaattacagtgaatttagttatgaaccat 1456060  T
Q  464 atgaaaagca 473  Q
    || |||||||    
T  1456059 ataaaaagca 1456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 504
Target Start/End: Complemental strand, 37552473 - 37552298
Alignment:
Q  335 ggagaaaatttagatacaattccacttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgaga 434  Q
    |||||||| |||| ||||||||  ||||| ||||||||||| ||||||||||||||       |  ||||||||||||||||||||||||| |||||||     
T  37552473 ggagaaaacttaggtacaattctgctttttgtatggttcttgactaaaaatacatatttttttgt-tataacaaactttgagaaaattatgaatttgagg 37552375  T
Q  435 aaatcatggtgaatttaattaagaaccatatgaaaagc--------aattgtacctaagttttctcctattttaaatt 504  Q
    || |||||||||||||| ||||||||| ||  ||||||        |||||||||||||||||||||| |||||||||    
T  37552374 aagtcatggtgaatttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctcct-ttttaaatt 37552298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 13754431 - 13754322
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||||||||||||||||||||||||       | ||||| |||||||||||||||||||| ||||||| |||| |||||||||||| |||||||    
T  13754431 ttttcgtatggttcttaactaaaaatacatatttttttg-atatagcaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaa 13754333  T
Q  460 ccatatgaaaa 470  Q
     |||| |||||    
T  13754332 tcatacgaaaa 13754322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 43539138 - 43539247
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||| |    
T  43539138 ttttcgtatggttctgaactataaatacatatttttt-ggatataacaaactttgagaaaattatggatttaagaaaatcacgatgaatttagttaagga 43539236  T
Q  460 ccatatgaaaa 470  Q
    ||||| |||||    
T  43539237 ccatacgaaaa 43539247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 451
Target Start/End: Original strand, 12744857 - 12744947
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaattta 451  Q
    |||| |||||||| |||||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12744857 tttttgtatggtttttaactaaaaatacatatttttt-ggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaattta 12744947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 12807942 - 12808051
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||||||||||| |||||||||||||||||       | |||||||||||||||| |||||||||||||| || ||||||||||||||||| | |||||    
T  12807942 ttttcgtatggtttttaactaaaaatacatattttttag-atataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaa 12808040  T
Q  460 ccatatgaaaa 470  Q
     |||| |||||    
T  12808041 tcatacgaaaa 12808051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 780895 - 780824
Alignment:
Q  400 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaag 471  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||||||| ||||  |||| ||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggtgaatttaatcaagagtcatacgaaaag 780824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 32623317 - 32623246
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    ||||||||||||||||||||||||||||||||    ||||||| ||||||||| |||||||||||| |||||    
T  32623317 gatataacaaactttgagaaaattatggatttacagaaatcatagtgaatttagttaagaaccatacgaaaa 32623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 8364729 - 8364668
Alignment:
Q  402 ataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 463  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| |||||||||||    
T  8364729 ataacaaactttgagagaattataaatttaagaaaatcatggtgaatttagttaagaaccat 8364668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 359 - 452
Target Start/End: Complemental strand, 1164937 - 1164844
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaa 452  Q
    ||||||||||||||||||| |||||||| |||       |||||||| ||||||| | |||||||||||||| | ||||||||||| |||||||    
T  1164937 cttttcgtatggttcttaattaaaaataaatatttttttggatataataaacttttaaaaaattatggatttaaaaaaatcatggtaaatttaa 1164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 18236536 - 18236608
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaa 470  Q
    |||||||||||||||||| ||||||||| |||| ||||||||| |  ||||||| |||||||||||| |||||    
T  18236536 ggatataacaaactttgaaaaaattatgtatttaagaaaatcacgacgaatttagttaagaaccatacgaaaa 18236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 35806965 - 35807069
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||| ||||||||||||||||||||||||        | |||||||||||||| | |||||||  ||||||||||||||||||||||||||  | |||    
T  35806965 cttttcatatggttcttaactaaaaatacat-cttttttgaatataacaaactttaaaaaaattaaagatttgagaaaatcatggtgaatttaggttaga 35807063  T
Q  459 accata 464  Q
    ||||||    
T  35807064 accata 35807069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 473
Target Start/End: Complemental strand, 21591300 - 21591241
Alignment:
Q  414 gagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||| ||||||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagca 21591241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 473
Target Start/End: Complemental strand, 21595417 - 21595358
Alignment:
Q  414 gagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||| ||||||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagca 21595358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 35276394 - 35276329
Alignment:
Q  399 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||| |||||| |||  |||||||    
T  35276394 gatataataaactttaagaaaattatggatttgataaaatcatggtaaatttagttataaaccata 35276329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 473
Target Start/End: Original strand, 2529066 - 2529124
Alignment:
Q  415 agaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||||||| || |||||| |||||||||| |||||||||| | ||||||||    
T  2529066 agaaaattatggatttaaggaaatcacggtgaatttagttaagaaccacacgaaaagca 2529124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 2538467 - 2538507
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaaaatcat 441  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  2538467 tataacaaactctgagaaaattatggatttgaaaaaatcat 2538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 28056179 - 28056226
Alignment:
Q  417 aaaattatggatttgagaaaatcatggtgaatttaattaagaaccata 464  Q
    |||||||||||||| ||||||||||| | |||||| ||||||||||||    
T  28056179 aaaattatggatttaagaaaatcatgataaatttagttaagaaccata 28056226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 12257614 - 12257580
Alignment:
Q  401 tataacaaactttgagaaaattatggatttgagaa 435  Q
    ||||||||||||||| |||||||||||||||||||    
T  12257614 tataacaaactttgaaaaaattatggatttgagaa 12257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 735346 - 735378
Alignment:
Q  400 atataacaaactttgagaaaattatggatttga 432  Q
    |||||||||||||||||||||||||| ||||||    
T  735346 atataacaaactttgagaaaattatgaatttga 735378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 473
Target Start/End: Original strand, 48156 - 48269
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||| |||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48156 cttttcgtatggtttttaattaaaaatacatatttttt-ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 48254  T
Q  459 accatatgaaaagca 473  Q
    || ||| ||||||||    
T  48255 actatacgaaaagca 48269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 7117 - 7229
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    |||||||||| |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  7117 ttttcgtatgattcttaactaaaaatatatatatttt-ggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 7215  T
Q  460 ccatatgaaaagca 473  Q
    ||||| ||||||||    
T  7216 ccatacgaaaagca 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 473
Target Start/End: Complemental strand, 3567 - 3421
Alignment:
Q  332 aaaggagaaaatttagatacaattcc------acttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatg 425  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||     
T  3567 aaaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttttt-ggatataacaaactttgataaaattata 3469  T
Q  426 gatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
     ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  3468 aatttgaggaaatcatggtgaatttaattaagaaccatacaaaaagca 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 471
Target Start/End: Original strand, 51093 - 51204
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaaga 458  Q
    |||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||| |||| || ||||||| ||||||||| ||||||    
T  51093 cttttcgtatggttcttaactaaaaatatatatttttt-ggatataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaaga 51191  T
Q  459 accatatgaaaag 471  Q
    |||||||||||||    
T  51192 accatatgaaaag 51204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 364 - 473
Target Start/End: Original strand, 10151 - 10258
Alignment:
Q  364 cgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccat 463  Q
    ||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||    
T  10151 cgtatggttcttaactaaaaatatatattttt--ggatataacaaactttgagaaaattatggatgtgagaaaatcatggtgaatttacttaagaattat 10248  T
Q  464 atgaaaagca 473  Q
    | ||||||||    
T  10249 acgaaaagca 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 2074 - 1967
Alignment:
Q  366 tatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatat 465  Q
    |||||||||||||||||||||| ||        |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||     
T  2074 tatggttcttaactaaaaatacgtatttttttagatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 1975  T
Q  466 gaaaagca 473  Q
     |||||||    
T  1974 aaaaagca 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 94240 - 94333
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatga--aaagcaattgtacctaagtttt 489  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||   ||| |||| ||||||||||||    
T  94240 ggatataacaaactatgagaaaattttggatttgataaaatcatggtgaatttagttaagaaccatatgatttaaggaattttacctaagtttt 94333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 473
Target Start/End: Original strand, 14473 - 14585
Alignment:
Q  360 ttttcgtatggttcttaactaaaaatacatannnnnnnggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaa 459  Q
    ||||| |||||| ||||||||||||||||||       |||||||||| |||||||||||||||||||| |||  || | |||||||||||| |||||||    
T  14473 ttttcctatggtacttaactaaaaatacatattattt-ggatataacagactttgagaaaattatggatatgacgaagtaatggtgaatttagttaagaa 14571  T
Q  460 ccatatgaaaagca 473  Q
    | ||| ||||||||    
T  14572 cgatacgaaaagca 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 473
Target Start/End: Original strand, 5797 - 5848
Alignment:
Q  422 tatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagca 473  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  5797 tatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagca 5848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 390
Target Start/End: Original strand, 5731 - 5762
Alignment:
Q  359 cttttcgtatggttcttaactaaaaatacata 390  Q
    ||||||||||||||||||||||||||||||||    
T  5731 cttttcgtatggttcttaactaaaaatacata 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 138380 - 138306
Alignment:
Q  398 ggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttaattaagaaccatatgaaaagc 472  Q
    |||||||| ||||||| | |||| ||||||||| ||||||||||| |||||||| ||||||| |||| |||||||    
T  138380 ggatataataaactttaaaaaaaatatggatttaagaaaatcatgatgaatttagttaagaatcatacgaaaagc 138306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University