View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5787-Insertion-2 (Length: 672)

Name: NF5787-Insertion-2
Description: NF5787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5787-Insertion-2
NF5787-Insertion-2
[»] chr1 (89 HSPs)
chr1 (8-345)||(35568736-35569062)
chr1 (344-512)||(39856670-39856838)
chr1 (344-499)||(29436574-29436729)
chr1 (344-507)||(27486147-27486310)
chr1 (344-507)||(29761589-29761752)
chr1 (345-512)||(50067694-50067861)
chr1 (344-507)||(49427987-49428150)
chr1 (344-507)||(13634739-13634902)
chr1 (344-507)||(19160918-19161081)
chr1 (344-512)||(49598323-49598491)
chr1 (344-507)||(48227139-48227302)
chr1 (344-512)||(30309283-30309451)
chr1 (345-512)||(13973530-13973697)
chr1 (344-507)||(22528108-22528271)
chr1 (382-512)||(46924709-46924839)
chr1 (344-512)||(45689722-45689889)
chr1 (344-512)||(47487472-47487640)
chr1 (345-512)||(12790706-12790873)
chr1 (344-512)||(41874327-41874493)
chr1 (344-512)||(48567841-48568009)
chr1 (385-512)||(38044625-38044752)
chr1 (382-512)||(24269799-24269928)
chr1 (348-512)||(49262433-49262596)
chr1 (344-443)||(51270403-51270502)
chr1 (382-512)||(23343283-23343413)
chr1 (382-512)||(35525630-35525760)
chr1 (382-512)||(39223713-39223841)
chr1 (601-670)||(33402351-33402420)
chr1 (601-670)||(33618773-33618842)
chr1 (372-512)||(18170859-18170999)
chr1 (388-512)||(27034808-27034932)
chr1 (382-512)||(17685792-17685922)
chr1 (382-512)||(37778749-37778878)
chr1 (417-507)||(51270506-51270596)
chr1 (345-488)||(35586376-35586519)
chr1 (358-433)||(46179797-46179872)
chr1 (382-512)||(35185626-35185756)
chr1 (382-512)||(49925814-49925944)
chr1 (344-420)||(29707066-29707142)
chr1 (385-512)||(42571208-42571336)
chr1 (382-433)||(36910203-36910254)
chr1 (382-512)||(49397287-49397417)
chr1 (382-433)||(41781310-41781361)
chr1 (383-433)||(5765559-5765609)
chr1 (385-507)||(14173196-14173318)
chr1 (383-430)||(16531895-16531942)
chr1 (383-433)||(37778437-37778487)
chr1 (262-339)||(13515918-13515994)
chr1 (383-432)||(14173557-14173606)
chr1 (344-512)||(39223634-39223802)
chr1 (383-431)||(36909919-36909967)
chr1 (383-430)||(17373082-17373129)
chr1 (383-433)||(13973282-13973332)
chr1 (383-433)||(17686156-17686206)
chr1 (383-433)||(18842811-18842861)
chr1 (390-432)||(21484252-21484294)
chr1 (383-433)||(41781051-41781101)
chr1 (347-512)||(50067738-50067901)
chr1 (383-432)||(40533085-40533134)
chr1 (344-405)||(46924853-46924914)
chr1 (384-424)||(16097895-16097935)
chr1 (607-670)||(7331079-7331142)
chr1 (417-512)||(13634848-13634941)
chr1 (417-512)||(19160879-19160972)
chr1 (385-432)||(23343001-23343048)
chr1 (383-429)||(16081641-16081687)
chr1 (417-487)||(48227123-48227193)
chr1 (384-433)||(35185330-35185379)
chr1 (383-432)||(35525996-35526045)
chr1 (385-433)||(6436132-6436180)
chr1 (383-431)||(24270165-24270213)
chr1 (476-512)||(48568081-48568117)
chr1 (417-512)||(29436535-29436628)
chr1 (417-512)||(39856784-39856877)
chr1 (417-512)||(47487586-47487679)
chr1 (383-433)||(13284059-13284109)
chr1 (417-487)||(22528092-22528162)
chr1 (383-433)||(24363611-24363661)
chr1 (417-487)||(41874439-41874509)
chr1 (475-512)||(17686034-17686071)
chr1 (383-432)||(35586731-35586780)
chr1 (383-432)||(38046233-38046282)
chr1 (475-512)||(50067934-50067971)
chr1 (472-512)||(13284191-13284231)
chr1 (472-512)||(17373214-17373254)
chr1 (472-512)||(18842943-18842983)
chr1 (472-512)||(24363488-24363528)
chr1 (472-512)||(41874561-41874601)
chr1 (472-512)||(45689610-45689650)
[»] chr4 (82 HSPs)
chr4 (344-507)||(1043350-1043513)
chr4 (344-512)||(45940128-45940296)
chr4 (346-512)||(885411-885577)
chr4 (344-507)||(9490083-9490246)
chr4 (344-507)||(40353216-40353379)
chr4 (344-507)||(49095346-49095509)
chr4 (344-507)||(56139511-56139674)
chr4 (344-507)||(28082838-28083001)
chr4 (344-512)||(31824124-31824292)
chr4 (382-507)||(6176758-6176883)
chr4 (382-507)||(21016620-21016745)
chr4 (344-512)||(27759930-27760098)
chr4 (364-498)||(47870719-47870850)
chr4 (344-512)||(21712132-21712300)
chr4 (344-507)||(55797344-55797507)
chr4 (382-512)||(6281939-6282069)
chr4 (382-507)||(4784810-4784935)
chr4 (344-512)||(46815961-46816129)
chr4 (345-512)||(956889-957056)
chr4 (345-512)||(36775953-36776120)
chr4 (382-488)||(14330101-14330207)
chr4 (382-512)||(22437554-22437684)
chr4 (382-499)||(49791383-49791500)
chr4 (352-492)||(38132576-38132716)
chr4 (382-512)||(2773652-2773782)
chr4 (345-512)||(42886885-42887052)
chr4 (382-512)||(21170093-21170223)
chr4 (382-512)||(34529230-34529360)
chr4 (387-488)||(14289901-14290002)
chr4 (408-512)||(37867160-37867264)
chr4 (385-512)||(241871-241998)
chr4 (385-512)||(51427626-51427753)
chr4 (382-512)||(43888935-43889065)
chr4 (385-491)||(49571755-49571861)
chr4 (601-670)||(36499725-36499794)
chr4 (359-489)||(49064651-49064781)
chr4 (383-512)||(49423191-49423320)
chr4 (601-670)||(55524627-55524696)
chr4 (382-433)||(49817442-49817493)
chr4 (605-670)||(45246144-45246209)
chr4 (383-433)||(10312625-10312675)
chr4 (410-512)||(34152721-34152823)
chr4 (383-433)||(49817000-49817050)
chr4 (383-433)||(4785221-4785271)
chr4 (383-433)||(17211622-17211672)
chr4 (383-433)||(24607086-24607136)
chr4 (383-433)||(32937724-32937774)
chr4 (383-432)||(49423557-49423606)
chr4 (417-512)||(1043311-1043404)
chr4 (421-512)||(25763250-25763341)
chr4 (428-487)||(37867100-37867159)
chr4 (383-433)||(21169809-21169859)
chr4 (383-433)||(24607411-24607461)
chr4 (417-487)||(28082822-28082892)
chr4 (607-672)||(22181572-22181637)
chr4 (383-432)||(32937401-32937450)
chr4 (383-432)||(42886624-42886673)
chr4 (417-512)||(6176867-6176960)
chr4 (417-512)||(21016729-21016822)
chr4 (409-512)||(39589491-39589592)
chr4 (417-488)||(40353325-40353396)
chr4 (417-512)||(49095307-49095400)
chr4 (417-512)||(55797305-55797398)
chr4 (383-433)||(957254-957304)
chr4 (383-433)||(3393657-3393707)
chr4 (383-433)||(34153085-34153135)
chr4 (383-432)||(2773367-2773416)
chr4 (383-432)||(36776319-36776368)
chr4 (395-427)||(18412962-18412994)
chr4 (420-512)||(34529347-34529437)
chr4 (381-433)||(49571461-49571513)
chr4 (416-512)||(56139472-56139566)
chr4 (417-512)||(14330191-14330284)
chr4 (417-487)||(45940112-45940182)
chr4 (450-512)||(49571577-49571639)
chr4 (391-433)||(49791735-49791777)
chr4 (475-512)||(34152963-34153000)
chr4 (443-512)||(34529473-34529542)
chr4 (383-432)||(34529596-34529645)
chr4 (475-512)||(38132796-38132833)
chr4 (349-398)||(39589535-39589584)
chr4 (475-512)||(46816201-46816238)
[»] chr3 (103 HSPs)
chr3 (344-512)||(11378412-11378580)
chr3 (344-512)||(13895318-13895486)
chr3 (344-507)||(51695374-51695537)
chr3 (346-488)||(34692749-34692891)
chr3 (344-512)||(44928079-44928247)
chr3 (344-507)||(2267935-2268098)
chr3 (344-499)||(43477654-43477809)
chr3 (344-507)||(49218176-49218339)
chr3 (344-507)||(49610777-49610940)
chr3 (344-505)||(50998003-50998164)
chr3 (344-491)||(24701728-24701875)
chr3 (346-512)||(42383669-42383835)
chr3 (382-507)||(34050380-34050505)
chr3 (347-512)||(44834922-44835087)
chr3 (382-507)||(54391095-54391220)
chr3 (344-504)||(36135622-36135782)
chr3 (344-512)||(47066302-47066470)
chr3 (368-512)||(53826455-53826599)
chr3 (353-512)||(39416382-39416541)
chr3 (344-507)||(49139495-49139658)
chr3 (382-507)||(2646317-2646442)
chr3 (344-507)||(25576031-25576194)
chr3 (345-512)||(36720769-36720936)
chr3 (345-512)||(34471508-34471675)
chr3 (385-498)||(46346058-46346171)
chr3 (372-512)||(52568845-52568985)
chr3 (345-512)||(46413753-46413920)
chr3 (382-507)||(3494470-3494595)
chr3 (348-504)||(55268501-55268657)
chr3 (345-512)||(34646647-34646814)
chr3 (345-512)||(41578525-41578692)
chr3 (382-512)||(51012719-51012849)
chr3 (380-512)||(2429142-2429274)
chr3 (389-512)||(42322830-42322953)
chr3 (382-512)||(19452579-19452709)
chr3 (601-670)||(39649091-39649160)
chr3 (382-507)||(41804559-41804684)
chr3 (381-512)||(10052818-10052949)
chr3 (382-445)||(46403656-46403719)
chr3 (348-491)||(49274026-49274169)
chr3 (382-512)||(45099907-45100037)
chr3 (601-670)||(15041348-15041417)
chr3 (601-670)||(34085953-34086022)
chr3 (384-452)||(7246753-7246821)
chr3 (385-512)||(55206316-55206443)
chr3 (381-512)||(14632101-14632232)
chr3 (382-433)||(7954575-7954626)
chr3 (383-433)||(27187685-27187735)
chr3 (605-670)||(35063822-35063887)
chr3 (417-512)||(3494579-3494672)
chr3 (344-419)||(4003616-4003691)
chr3 (383-430)||(20375685-20375732)
chr3 (384-433)||(15637361-15637410)
chr3 (609-670)||(35996359-35996420)
chr3 (383-431)||(7955024-7955072)
chr3 (607-670)||(19867635-19867696)
chr3 (411-507)||(51015955-51016051)
chr3 (383-433)||(2428859-2428909)
chr3 (383-433)||(8633162-8633212)
chr3 (383-433)||(18441114-18441164)
chr3 (383-433)||(19486188-19486238)
chr3 (384-433)||(6754575-6754624)
chr3 (384-433)||(25887408-25887457)
chr3 (383-432)||(34647065-34647114)
chr3 (372-512)||(36135583-36135721)
chr3 (383-432)||(42323188-42323237)
chr3 (384-433)||(43570283-43570332)
chr3 (383-432)||(49273771-49273820)
chr3 (364-487)||(2646373-2646496)
chr3 (472-512)||(27187817-27187857)
chr3 (384-432)||(34471874-34471922)
chr3 (380-428)||(42949754-42949802)
chr3 (417-512)||(4003637-4003730)
chr3 (385-432)||(8632839-8632886)
chr3 (417-512)||(11378526-11378619)
chr3 (417-512)||(34050303-34050396)
chr3 (383-430)||(45100265-45100312)
chr3 (417-512)||(46403579-46403672)
chr3 (417-512)||(54391018-54391111)
chr3 (383-433)||(6464144-6464194)
chr3 (390-432)||(10053184-10053226)
chr3 (383-433)||(41578277-41578327)
chr3 (383-433)||(46346409-46346459)
chr3 (449-507)||(46405725-46405783)
chr3 (262-339)||(15080435-15080511)
chr3 (383-432)||(41804274-41804323)
chr3 (383-432)||(51015649-51015698)
chr3 (383-432)||(55206682-55206731)
chr3 (448-512)||(41578385-41578449)
chr3 (420-512)||(47066263-47066353)
chr3 (383-431)||(51013077-51013125)
chr3 (411-487)||(51015880-51015956)
chr3 (383-430)||(7246466-7246513)
chr3 (417-512)||(43477615-43477708)
chr3 (417-512)||(49139604-49139697)
chr3 (417-487)||(49610761-49610831)
chr3 (417-487)||(50997987-50998057)
chr3 (384-433)||(33448952-33449001)
chr3 (423-512)||(43570558-43570647)
chr3 (383-432)||(46414132-46414181)
chr3 (475-512)||(52569084-52569121)
chr3 (383-431)||(52569208-52569256)
chr3 (472-512)||(55268662-55268701)
[»] chr8 (39 HSPs)
chr8 (359-507)||(44051066-44051214)
chr8 (364-507)||(41275698-41275841)
chr8 (344-497)||(42168408-42168561)
chr8 (344-512)||(28705575-28705743)
chr8 (344-507)||(24861954-24862117)
chr8 (344-507)||(22549690-22549853)
chr8 (344-512)||(15031759-15031927)
chr8 (382-507)||(484698-484823)
chr8 (344-458)||(26452923-26453037)
chr8 (344-488)||(40415869-40416013)
chr8 (349-512)||(38033359-38033522)
chr8 (347-512)||(18439726-18439891)
chr8 (344-456)||(33799241-33799353)
chr8 (352-512)||(43637199-43637358)
chr8 (382-512)||(42604104-42604234)
chr8 (372-512)||(40703004-40703144)
chr8 (386-512)||(41856404-41856530)
chr8 (601-670)||(34277069-34277138)
chr8 (344-407)||(41017288-41017351)
chr8 (386-512)||(28167439-28167565)
chr8 (383-433)||(16576024-16576074)
chr8 (382-425)||(2417622-2417665)
chr8 (417-512)||(41275639-41275732)
chr8 (383-433)||(16576349-16576399)
chr8 (383-433)||(18440091-18440141)
chr8 (383-433)||(44942877-44942927)
chr8 (417-512)||(484807-484900)
chr8 (383-433)||(37780512-37780562)
chr8 (368-512)||(22549651-22549793)
chr8 (383-432)||(40702729-40702778)
chr8 (437-501)||(41363911-41363975)
chr8 (417-512)||(15031873-15031966)
chr8 (417-512)||(41017297-41017390)
chr8 (450-512)||(18439969-18440031)
chr8 (417-487)||(26452907-26452977)
chr8 (390-432)||(41856769-41856811)
chr8 (384-432)||(19241959-19242007)
chr8 (384-432)||(19315143-19315191)
chr8 (385-433)||(31171614-31171662)
[»] chr2 (58 HSPs)
chr2 (344-512)||(22493878-22494046)
chr2 (348-507)||(3942019-3942178)
chr2 (346-512)||(5420749-5420915)
chr2 (344-507)||(29073649-29073812)
chr2 (346-512)||(42120621-42120787)
chr2 (359-512)||(16582445-16582598)
chr2 (382-507)||(39799308-39799433)
chr2 (382-507)||(17425432-17425557)
chr2 (382-507)||(22002477-22002602)
chr2 (382-512)||(41498523-41498653)
chr2 (344-512)||(8557158-8557326)
chr2 (382-512)||(32736731-32736861)
chr2 (382-512)||(34521175-34521305)
chr2 (382-507)||(28476148-28476273)
chr2 (388-512)||(35492239-35492363)
chr2 (344-491)||(10359652-10359799)
chr2 (344-450)||(18393956-18394062)
chr2 (382-512)||(19471058-19471188)
chr2 (382-512)||(23408358-23408488)
chr2 (601-670)||(11574488-11574557)
chr2 (395-512)||(24108231-24108348)
chr2 (359-488)||(43492074-43492203)
chr2 (385-512)||(2918802-2918929)
chr2 (390-512)||(17538377-17538499)
chr2 (386-512)||(40676815-40676941)
chr2 (385-512)||(6977486-6977613)
chr2 (384-433)||(20148492-20148541)
chr2 (426-507)||(43983412-43983493)
chr2 (383-430)||(33404373-33404420)
chr2 (383-433)||(16253814-16253864)
chr2 (383-433)||(29111496-29111546)
chr2 (383-432)||(6902340-6902389)
chr2 (606-669)||(10325281-10325344)
chr2 (605-667)||(8276568-8276630)
chr2 (383-433)||(10364431-10364481)
chr2 (406-512)||(24936434-24936540)
chr2 (383-433)||(35491997-35492047)
chr2 (383-433)||(40677169-40677219)
chr2 (383-432)||(6977198-6977247)
chr2 (605-670)||(35001104-35001169)
chr2 (417-512)||(17425355-17425448)
chr2 (417-512)||(22002400-22002493)
chr2 (417-512)||(39799417-39799510)
chr2 (382-416)||(10364162-10364196)
chr2 (417-487)||(10364180-10364250)
chr2 (383-433)||(19471428-19471478)
chr2 (383-433)||(43491812-43491862)
chr2 (383-432)||(2919160-2919209)
chr2 (417-512)||(5420708-5420801)
chr2 (417-512)||(8557272-8557365)
chr2 (413-512)||(25685097-25685196)
chr2 (417-512)||(29073610-29073703)
chr2 (417-512)||(42120580-42120673)
chr2 (383-432)||(27130304-27130353)
chr2 (383-432)||(37312290-37312339)
chr2 (435-487)||(3936628-3936680)
chr2 (472-512)||(33404505-33404545)
chr2 (448-512)||(35492104-35492168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (344-507)||(2394-2557)
scaffold0176 (417-512)||(2355-2448)
[»] chr7 (59 HSPs)
chr7 (344-507)||(34141469-34141632)
chr7 (344-512)||(17183820-17183988)
chr7 (344-507)||(45362693-45362856)
chr7 (344-512)||(28978637-28978806)
chr7 (344-512)||(30361120-30361288)
chr7 (344-507)||(13920909-13921072)
chr7 (382-507)||(9366560-9366685)
chr7 (344-507)||(10523672-10523835)
chr7 (344-507)||(17839913-17840076)
chr7 (344-512)||(39476676-39476844)
chr7 (344-512)||(41218217-41218385)
chr7 (344-491)||(20378487-20378634)
chr7 (347-491)||(34157410-34157554)
chr7 (385-512)||(42683058-42683185)
chr7 (382-507)||(20565400-20565525)
chr7 (382-512)||(48271293-48271423)
chr7 (383-512)||(20877484-20877613)
chr7 (344-433)||(48220258-48220347)
chr7 (345-512)||(21186731-21186898)
chr7 (382-512)||(30354247-30354377)
chr7 (347-512)||(18238172-18238337)
chr7 (349-452)||(26601273-26601376)
chr7 (358-512)||(28113826-28113979)
chr7 (346-507)||(40589154-40589303)
chr7 (400-488)||(41622741-41622829)
chr7 (382-507)||(10224712-10224836)
chr7 (345-489)||(36393280-36393424)
chr7 (383-512)||(42735622-42735751)
chr7 (384-512)||(46861631-46861755)
chr7 (382-512)||(34353271-34353401)
chr7 (383-433)||(21614582-21614632)
chr7 (384-433)||(1642389-1642438)
chr7 (390-433)||(15337702-15337745)
chr7 (417-512)||(17839874-17839967)
chr7 (383-430)||(21614260-21614307)
chr7 (417-487)||(9366669-9366739)
chr7 (383-433)||(20877849-20877899)
chr7 (383-433)||(36393622-36393672)
chr7 (384-433)||(21187096-21187145)
chr7 (417-512)||(13920870-13920963)
chr7 (417-512)||(17183781-17183874)
chr7 (417-512)||(20378580-20378673)
chr7 (417-512)||(34141430-34141523)
chr7 (383-498)||(43350832-43350947)
chr7 (383-433)||(21650883-21650933)
chr7 (610-668)||(23561756-23561814)
chr7 (383-433)||(46861991-46862041)
chr7 (383-433)||(48271008-48271058)
chr7 (383-432)||(30354613-30354662)
chr7 (609-668)||(12169990-12170049)
chr7 (417-512)||(20565323-20565416)
chr7 (384-431)||(28114192-28114239)
chr7 (417-512)||(39476790-39476883)
chr7 (383-422)||(48314988-48315027)
chr7 (419-501)||(40589123-40589204)
chr7 (450-512)||(48271118-48271180)
chr7 (475-512)||(15337580-15337617)
chr7 (472-512)||(26500378-26500418)
chr7 (472-512)||(26592295-26592335)
[»] scaffold0589 (1 HSPs)
scaffold0589 (344-512)||(4889-5057)
[»] scaffold0199 (2 HSPs)
scaffold0199 (344-499)||(11211-11366)
scaffold0199 (417-512)||(11312-11405)
[»] chr6 (39 HSPs)
chr6 (344-511)||(13617337-13617504)
chr6 (382-507)||(6206127-6206252)
chr6 (382-507)||(11693094-11693219)
chr6 (347-507)||(2192999-2193159)
chr6 (386-507)||(29067144-29067265)
chr6 (386-507)||(29108731-29108852)
chr6 (347-491)||(24020554-24020698)
chr6 (382-507)||(27640819-27640944)
chr6 (344-512)||(35058170-35058338)
chr6 (368-512)||(13403448-13403592)
chr6 (385-512)||(12397426-12397553)
chr6 (382-512)||(32027060-32027190)
chr6 (382-512)||(32037119-32037249)
chr6 (382-512)||(35020669-35020799)
chr6 (603-670)||(31519737-31519804)
chr6 (382-455)||(7821232-7821305)
chr6 (258-335)||(29483556-29483632)
chr6 (383-512)||(34802614-34802743)
chr6 (383-432)||(801526-801575)
chr6 (383-432)||(4495266-4495315)
chr6 (417-512)||(2192957-2193050)
chr6 (383-433)||(14122963-14123013)
chr6 (258-339)||(15684638-15684720)
chr6 (383-425)||(23911112-23911154)
chr6 (417-487)||(24020647-24020717)
chr6 (417-501)||(35058284-35058367)
chr6 (417-512)||(6206050-6206143)
chr6 (383-433)||(13402895-13402945)
chr6 (447-512)||(4495593-4495658)
chr6 (383-432)||(30257377-30257426)
chr6 (383-432)||(32027426-32027475)
chr6 (383-432)||(32037485-32037534)
chr6 (417-484)||(13617450-13617517)
chr6 (417-487)||(11693040-11693110)
chr6 (383-432)||(12397138-12397187)
chr6 (621-670)||(13543073-13543122)
chr6 (417-512)||(27640745-27640835)
chr6 (383-432)||(35021035-35021084)
chr6 (472-512)||(14123418-14123457)
[»] chr5 (61 HSPs)
chr5 (344-507)||(8575585-8575748)
chr5 (344-507)||(38854757-38854920)
chr5 (382-507)||(27660821-27660946)
chr5 (346-512)||(40012220-40012386)
chr5 (348-512)||(3459396-3459560)
chr5 (347-507)||(22284173-22284333)
chr5 (344-507)||(6673-6836)
chr5 (349-512)||(19400970-19401133)
chr5 (382-507)||(11028088-11028213)
chr5 (344-507)||(30710197-30710360)
chr5 (382-507)||(19036118-19036243)
chr5 (344-507)||(28881590-28881753)
chr5 (382-512)||(1399740-1399870)
chr5 (344-512)||(1971967-1972134)
chr5 (345-512)||(6792911-6793078)
chr5 (345-512)||(7082877-7083044)
chr5 (345-512)||(35565876-35566043)
chr5 (382-512)||(1695432-1695562)
chr5 (382-512)||(18308901-18309031)
chr5 (384-512)||(11347351-11347479)
chr5 (345-512)||(25498687-25498854)
chr5 (601-670)||(5505602-5505671)
chr5 (359-512)||(20196697-20196849)
chr5 (382-498)||(34683374-34683490)
chr5 (345-512)||(1171792-1171959)
chr5 (382-507)||(36349763-36349891)
chr5 (364-512)||(3601967-3602115)
chr5 (601-670)||(762472-762541)
chr5 (601-670)||(30490915-30490984)
chr5 (605-670)||(34016791-34016856)
chr5 (417-512)||(30710158-30710251)
chr5 (383-433)||(12743043-12743093)
chr5 (383-433)||(12805861-12805911)
chr5 (385-512)||(4723509-4723636)
chr5 (417-512)||(8575694-8575787)
chr5 (417-512)||(27660930-27661023)
chr5 (383-430)||(33370986-33371033)
chr5 (383-433)||(1400102-1400152)
chr5 (383-433)||(4723874-4723924)
chr5 (344-398)||(8538553-8538607)
chr5 (383-429)||(10398147-10398193)
chr5 (383-433)||(17366531-17366581)
chr5 (383-433)||(36350125-36350175)
chr5 (383-432)||(1695147-1695196)
chr5 (415-512)||(8538514-8538609)
chr5 (383-431)||(35565628-35565676)
chr5 (417-512)||(28881551-28881644)
chr5 (417-487)||(6782-6852)
chr5 (417-487)||(7082860-7082930)
chr5 (347-512)||(11028011-11028174)
chr5 (383-433)||(12743379-12743428)
chr5 (383-433)||(12806198-12806247)
chr5 (383-433)||(33371311-33371361)
chr5 (472-512)||(17366409-17366449)
chr5 (383-431)||(18308617-18308665)
chr5 (390-433)||(34683726-34683769)
chr5 (417-512)||(38854717-38854811)
chr5 (417-487)||(1171775-1171845)
chr5 (475-512)||(19400856-19400893)
chr5 (383-431)||(6793278-6793326)
chr5 (472-512)||(10398279-10398319)
[»] scaffold0268 (2 HSPs)
scaffold0268 (347-507)||(15076-15236)
scaffold0268 (417-507)||(15037-15127)
[»] scaffold0044 (1 HSPs)
scaffold0044 (262-334)||(4784-4855)
[»] scaffold0192 (1 HSPs)
scaffold0192 (409-512)||(17378-17481)
[»] scaffold0293 (1 HSPs)
scaffold0293 (605-670)||(9671-9736)
[»] scaffold0700 (1 HSPs)
scaffold0700 (605-670)||(372-437)
[»] scaffold0861 (1 HSPs)
scaffold0861 (460-512)||(2760-2812)


Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-152; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 345
Target Start/End: Original strand, 35568736 - 35569062
Alignment:
Q  8 aaaatttccctagttttgtgaatattgacaattgcaggttggtcttctaatcacggttactagcaccttccccataaaacacaattaattaaacacccag 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||    
T  35568736 aaaatttccctagttttgtgaatattgacaattgcaggttggtcttctaatcacggtt-----------ccccataaaacacaattaattaaacacccag 35568824  T
Q  108 ttttgcaagaannnnnnnngtaaaggttcgtaaattttctttttatgcaaataagaaaaactaccaactttaaaagctcacccagtttaataatccaccc 207  Q
    |||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35568825 ttttgcaagaattttttttgtaaaggttcgtaaattttctttttatgcagataagaaaaactaccaactttaaaagctcacccagtttaataatccaccc 35568924  T
Q  208 aaaggaataaactagaaattcaattgttaacatccctaattttcacctcaaaaatcatcaattcatcaattaattataagctagaacaagatgaaaagtg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35568925 aaaggaataaactagaaattcaattgttaacatccctaattttcacctcaaaaatcatcaattcatcaattaattataagctagaacaagatgaaaagtg 35569024  T
Q  308 attatgagaataagtatccaacccccttacctcttttc 345  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35569025 attatgagaataagtatccaacccccttacctcttttc 35569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 39856838 - 39856670
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39856838 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 39856739  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||| ||||| ||| ||||||||| |||||||||||  |||||||||| |||||||||    
T  39856738 tgttgatcgaatactggagtcctgctggttagcaaatttgaatttgctccattcagaggcaagacaatt 39856670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 344 - 499
Target Start/End: Original strand, 29436574 - 29436729
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29436574 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 29436673  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 499  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||||| |||||||    
T  29436674 tgttgatcgaatactggagtcctgctagttagcaagtttgaatttgccccattcag 29436729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 27486310 - 27486147
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  27486310 tcggtaggactccaacatttgataagcatcttgaacgctgatattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccagcgttcaaga 27486211  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  27486210 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 27486147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 29761752 - 29761589
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29761752 tcggcgggactccaacatatgataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttgaaga 29761653  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
     | |||||||||||| ||||| ||| ||||||||||||||||||||||  |||||| |||||||    
T  29761652 cgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccaaattcagtggtaaga 29761589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 50067861 - 50067694
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50067861 cggcaggactccaacattcgataaacgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagat 50067762  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||  | ||||| ||| | ||||||||||||||||| || |||| || || |||||||||    
T  50067761 gttgatcgaatgttggagtcctgctgcttagcaagtttgaattttccccatttaggggcaagacaatt 50067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 49427987 - 49428150
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49427987 tcggtaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49428086  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||| ||||| | | ||| ||| | |||||||||||||||||||  ||||||| |||||||    
T  49428087 tgttgattgaatattggtgtcctgctgcttagcaagtttgaatttgctccattcagtggtaaga 49428150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 13634902 - 13634739
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13634902 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13634803  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| | ||||||||||| |||||||| ||||||| |||||||    
T  13634802 tgctgatcgaatactggagtcctgctgcttagcaagtttaaatttgccccattcagtggtaaga 13634739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 19160918 - 19161081
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19160918 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 19161017  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  19161018 tgctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 19161081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 49598491 - 49598323
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| ||||||| |||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  49598491 tcggcatgactccaacattcgataagcctcttgaatgatggtattcatgtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 49598392  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||||||||||| ||||||| ||||    
T  49598391 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgcctcattcagtggtaagataatt 49598323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 48227139 - 48227302
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||| |   ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||    
T  48227139 tcggcaggacttcagtattcgataagcgtcttgaacgctggtattcaagtgtcaagaaatgcacctcattcttttgacacttgaataccagtgttccaga 48227238  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  48227239 tgatgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 48227302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 30309451 - 30309283
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||| ||| ||||| ||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  30309451 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcgttcttttgacacttgaataccatcattcaaga 30309352  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||| | ||| |||||||||||||||| ||||||| || |||||||||    
T  30309351 tgttgatcgtatgttggagtcatgctgcttaacaagtttgaatttgccccattcaggggcaagacaatt 30309283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 13973530 - 13973697
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  13973530 cggcaggaatccagcatttgatgagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 13973629  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | |||| | ||  | ||||||||| | ||| |||||||||||||||| ||||||| ||||||| ||||    
T  13973630 gctgattggatgttggagtcttgctgcttaacaagtttgaatttgccccattcagtggtaagataatt 13973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 22528108 - 22528271
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||||||| ||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  22528108 tcggcaggactccagcatttgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttgtgacacttgaataccagtgttcaaga 22528207  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||  ||| | ||| |||||||||||||||| ||||||| |||||||    
T  22528208 tgctgatcgaatactggtgttctgctgcttaacaagtttgaatttgccccattcagtggtaaga 22528271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 46924839 - 46924709
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||  | ||||| ||| | ||||||||||    
T  46924839 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgttgatcgtatgttggagtcatgctgcttagcaagtt 46924740  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||||||| || |||||||||    
T  46924739 tgaatttgccacattcaggggcaagacaatt 46924709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 45689722 - 45689889
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| | ||||| |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  45689722 tcggcaagactccaacattag-taagcatcttgaacgatgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaaga 45689820  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||| | |||||||||| ||||||||| |||||||||| |||| ||||    
T  45689821 tgttgatcgtatgttggagtcctgctgcttagcaagttcgaatttgccccattcagaggcaagataatt 45689889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 47487640 - 47487472
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| | ||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  47487640 tcggcatgactccaatattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 47487541  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||| ||||| | ||||| |||   ||| ||||||| |||||||| ||||||  ||||||||||||    
T  47487540 tgctgatggaatattggagtcctgcttcttaacaagtttaaatttgccccattcacgggtaagacaatt 47487472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 12790873 - 12790706
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| ||||| | |||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||    
T  12790873 cggcaggaatccaacattcgataaccatcttgaataatggtattcaagtgtcaaggaatgcaactcattcttttgacacttgaatacgatcattcaagat 12790774  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||  | ||||| ||| | ||||||||||||||||| || |||| |||||||||| ||||    
T  12790773 gttgatcgtatgttggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaagataatt 12790706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 41874493 - 41874327
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||||  | |||||||    
T  41874493 tcggcatgactccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacactt--ataccctcattcaaga 41874396  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||  | ||| |||||||||||||||| |||| || ||||||| ||||    
T  41874395 tgttgatcgtatgttggagtcctgttgcttaacaagtttgaatttgccccattgagtggtaagataatt 41874327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 48568009 - 48567841
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| |||||  |||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||    
T  48568009 tcggcatgactccaacattcaataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactatcattcaaga 48567910  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| | ||  | |||||||   | ||| ||| ||||||||| || ||||||| ||||||| ||||    
T  48567909 tgttgattgtatgttggagtctttttgcttatcaattttgaattttccccattcagtggtaagataatt 48567841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 38044752 - 38044625
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||  || |||||||| ||  | |||||||||||||    
T  38044752 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcagatgctagagtcctgttgtttagcaagtttga 38044653  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    |||||||  |||||| ||||||| ||||    
T  38044652 atttgcccaattcagtggtaagataatt 38044625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 24269928 - 24269799
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||| |||| || || ||||| ||| | ||||||||||    
T  24269928 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgttcatcgcat-ctggagtcctgctgtttagcaagtt 24269830  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||  ||||| |||||||| ||||    
T  24269829 tgaatttgcccaattcaaaggtaagataatt 24269799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 512
Target Start/End: Complemental strand, 49262596 - 49262433
Alignment:
Q  348 caggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 447  Q
    |||||||||  |||| ||||||| |||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |    
T  49262596 caggactccagcattcgataagcctcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataacatcattcaagatgct 49262497  T
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | ||  ||  ||||||| ||  | |||||||||||||||||||||||| || | |||||||||||    
T  49262496 gttcagatgttagagtcatgatgtttagcaagtttgaatttgcctcatccata-gtaagacaatt 49262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 51270403 - 51270502
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| |||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||    
T  51270403 tcggcaggactccaacattcgataagcgtcttcaatgttggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaatatcagcgttgaaga 51270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 23343283 - 23343413
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||| |||| || || ||||| ||| | ||||||||||    
T  23343283 tggtatccaagtgtcaaggaatgcagctcagtcttttgacacttgaataccatcattcaagatgttcatcgcatgctggagtcctgctgtttagcaagtt 23343382  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||  ||||||  ||||||| ||||    
T  23343383 tgaatttgctccattcaagggtaagataatt 23343413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 35525760 - 35525630
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| || | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  35525760 tggtatccaagtgtcaatgaatgcacctcattcttttgacacttgaatatcatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaagtt 35525661  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  35525660 tgaatttaccccattcaggggtaagataatt 35525630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 39223713 - 39223841
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||  | || || ||||| ||| ||||||    
T  39223713 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaagatgcttatcgaatgttggactcctgccgattaacaagtt 39223812  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| ||||| ||| |||| |||||||||||    
T  39223813 tgaa-ttgccccatccaga-gtaagacaatt 39223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 33402351 - 33402420
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33402351 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 33402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 33618773 - 33618842
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33618773 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 33618842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 18170859 - 18170999
Alignment:
Q  372 tcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccgg 471  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |  | || || ||| | |||||||| | ||||||||| |     
T  18170859 tcttaaatgatggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaatatcgtcatttaaaatgctcatcgaatattggagtcttgcagt 18170958  T
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||| |||||||||||||||| ||||||  ||||||| ||||    
T  18170959 ttaacaagtttgaatttgccccattcaagggtaagataatt 18170999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 388 - 512
Target Start/End: Complemental strand, 27034932 - 27034808
Alignment:
Q  388 tcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||  | ||||| ||| | ||||  | ||||||||    
T  27034932 tcaagtgtcaaagaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcgtatgttggagtcctgctgcttagtcattttgaatt 27034833  T
Q  488 tgcctcattcagaggtaagacaatt 512  Q
    |||| ||||||| || |||||||||    
T  27034832 tgccccattcaggggcaagacaatt 27034808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 17685922 - 17685792
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| | || || ||| | |||||| | | ||||  ||| | ||||||||||    
T  17685922 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgattaccatcatttaaaatgctcatcgaacattggagttctgctgtttagcaagtt 17685823  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||  | ||||||||||||||| ||||    
T  17685822 tgaatttatcccattcagaggtaagataatt 17685792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 37778749 - 37778878
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| | |||| ||  | ||||| ||| | ||||||||||    
T  37778749 tggtatccaagtgtcaaggaatgcacctcattcttttgacagttgaataccatcattcaagatgatcatcgcatgttggagtcctgctgtttagcaagtt 37778848  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||| ||| |||||||||| ||||    
T  37778849 tgaatttacct-atttagaggtaagataatt 37778878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 507
Target Start/End: Original strand, 51270506 - 51270596
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||||||||| || |||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  51270506 ttgacacttgaatatcagcgttgaagacgctgatcgaatactagagtcatgctggttagcaagtttgaatttgcctcattcagtggtaaga 51270596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 345 - 488
Target Start/End: Complemental strand, 35586519 - 35586376
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||| ||| ||| |||||||   |||||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  35586519 cggcaggaatccagcattcgatgagcatcttaaataatggtatccaagtgtcaaggaatgcacctcattcttttgacacttaaataccatcattcaagat 35586420  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    | | |||| ||  | ||||||||  | |||||||||||||||||    
T  35586419 gctcatcgcatgttggagtcttgttgtttagcaagtttgaattt 35586376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 358 - 433
Target Start/End: Complemental strand, 46179872 - 46179797
Alignment:
Q  358 acatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46179872 acattcgataagcctcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 46179797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 35185626 - 35185756
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |||| | | | ||||| | | | ||||||||||    
T  35185626 tggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgctcatcgcaaaatggagtcctactgtttagcaagtt 35185725  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| | ||||||  ||||||| ||||    
T  35185726 tgaatttgtcccattcaagggtaagataatt 35185756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 49925944 - 49925814
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||  ||||| | |||| ||  | ||| | ||| | ||||||| ||    
T  49925944 tggtattcaagtgtcaagaaatgcacctcattcttttgaaacttgaataccatcgttgcagatgctcatcggatgttggagccctgctgtttagcaaatt 49925845  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||||||| ||||||| ||||    
T  49925844 tgaatttgccccattcagtggtaagataatt 49925814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 29707142 - 29707066
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttga 420  Q
    ||||||||||| | |||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  29707142 tcggcaggacttcaacattcaataagcgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttga 29707066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 42571336 - 42571208
Alignment:
Q  385 tattcaagtgtcaa-ggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 483  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | || || ||| | |||| || |||||||| |||   ||||||||| ||    
T  42571336 tattcaagtgtcaaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctagagtcctgctatttagcaagtatg 42571237  T
Q  484 aatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||||||  ||||||| ||||    
T  42571236 aatttgccccattcaagggtaagataatt 42571208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 433
Target Start/End: Original strand, 36910203 - 36910254
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36910203 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 36910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 49397287 - 49397417
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| | || || ||| | |||| || || ||||| ||| | ||  ||||||    
T  49397287 tggtattcaagtgtcaaggaatgcacctcgttcttttgatacttgaataccatcatttaaaatgctcatcgcatgctggagtcctgctgtttgacaagtt 49397386  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||||| ||||| ||||    
T  49397387 tgaatttaccccattcagagataagataatt 49397417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 433
Target Start/End: Original strand, 41781310 - 41781361
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41781310 tggtattcaagtgtcatggaatgcacctcattcttttgacacttgaatacca 41781361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 5765559 - 5765609
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5765559 ggtattaaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 5765609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 507
Target Start/End: Complemental strand, 14173318 - 14173196
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||| || | || || ||| | |||| || || ||||| ||| | |||||||||||||    
T  14173318 tattcatgtgtcaaggaatgcatctcattcttttgacacatgaatatcatcatttaaaatgctcatcgcatgctggagtcctgctgtttagcaagtttga 14173219  T
Q  485 atttgcctcattcagaggtaaga 507  Q
    |||| || ||||||| |||||||    
T  14173218 atttaccccattcaggggtaaga 14173196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 16531942 - 16531895
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16531942 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 16531895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 37778437 - 37778487
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  37778437 ggtattgaagtgtcaaggaatgaacctcattcttttgacacttgaatacca 37778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 13515918 - 13515994
Alignment:
Q  262 tcatcaattcatcaattaattataagctagaacaagatgaaaagtgattatgagaataagtatccaacccccttacct 339  Q
    ||||||||||| || |||| | ||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||    
T  13515918 tcatcaattcaacatttaaatgtaagctagatcaaaa-gaaaagtgattacgagaataagtatccaacccccttacct 13515994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 14173606 - 14173557
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  14173606 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacc 14173557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 39223802 - 39223634
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaag 442  Q
    ||||||||| ||| ||||| ||||||| |||| || |||||||||||||||||||  |||||     ||||| || ||||||||||||||| | ||||||    
T  39223802 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccatcattcaag 39223704  T
Q  443 atgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||  | ||||| ||| | ||||   ||||||||||||| ||||||| || |||||||||    
T  39223703 atgttgatcggatgttggagtcgtgctgcttagggtgtttgaatttgccccattcaggggcaagacaatt 39223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 36909919 - 36909967
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  36909919 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatac 36909967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 17373082 - 17373129
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  17373082 ggtattgaagtgtcaaagaatgcacctcattcttttgacacttgaata 17373129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 13973282 - 13973332
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  13973282 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 13973332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 17686206 - 17686156
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  17686206 ggtattgaagtttcaaggaatgcacctcatttttttgacacttgaatacca 17686156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 18842811 - 18842861
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  18842811 ggtattgaagtgtcaaagaatgcacctcattcttgtgacacttgaatacca 18842861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 21484294 - 21484252
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  21484294 aagtgtcaaggaatgcacctcattcttttgacacttcaatacc 21484252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 41781051 - 41781101
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  41781051 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 41781101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 512
Target Start/End: Original strand, 50067738 - 50067901
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    |||||||||| ||||| ||| | | |||| ||||||||||||||||||||||  |||||     ||||| || ||||||||||||||| |||| |||| |    
T  50067738 gcaggactccaacattcgatcaacatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagcgtttaagacg 50067836  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||  | ||||| ||||||||| |||||||||| ||||| ||| |||| |||||||||||    
T  50067837 tttatcgaatgttggagtcctgccggttaacaagtttgaa-ttgccccatccaga-gtaagacaatt 50067901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 40533134 - 40533085
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  40533134 ggtattgaagtgtcaacgaatggacctcattcttttgacacttgaatacc 40533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 46924914 - 46924853
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgc 405  Q
    ||||||||| ||| ||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  46924914 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgc 46924853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 16097935 - 16097895
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacact 424  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  16097935 gtattgaagtgtcaaggaatgcacctcattcttttgacact 16097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 670
Target Start/End: Complemental strand, 7331142 - 7331079
Alignment:
Q  607 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||| ||||| ||||||||||||||||  ||||  ||||||||| ||||||||||||||||    
T  7331142 actagatttatctatagaaatagtaaatccatcccttgccgcttgtcaacgaacccaaccaagt 7331079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 13634848 - 13634941
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  13634848 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 13634941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 19160972 - 19160879
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  19160972 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 19160879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 23343001 - 23343048
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  23343001 tattgaagtgtcaaggaatggacctcattcttttgacacctgaatacc 23343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 429
Target Start/End: Original strand, 16081641 - 16081687
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaat 429  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  16081641 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaat 16081687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 48227193 - 48227123
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| ||||||||| | | ||||||||||  |||| ||||| ||| ||||||||||||    
T  48227193 ttgacacttgaataccagcgttcaagacgcttatcgaatactgaagtcctgccgattaacaagtttgaatt 48227123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 35185330 - 35185379
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||| ||||| | ||||||||||||||||||||||||||    
T  35185330 gtattgaagtgtcaatgaatggatctcattcttttgacacttgaatacca 35185379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 35526045 - 35525996
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| || |||||||||||  |||||||||||||||||||||||||||    
T  35526045 ggtattgaattgtcaaggaatagacctcattcttttgacacttgaatacc 35525996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 433
Target Start/End: Original strand, 6436132 - 6436180
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||||    
T  6436132 tattgaagtgtcaaggaatggacctcattcttttggcatttgaatacca 6436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 24270213 - 24270165
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| || |||||| ||||| ||||||||||||||||||||||||||    
T  24270213 ggtattgaaatgtcaatgaatgaacctcattcttttgacacttgaatac 24270165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 512
Target Start/End: Complemental strand, 48568117 - 48568081
Alignment:
Q  476 caagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||||||| |||||||||||||    
T  48568117 caagtttgaatttgcctcattcaaaggtaagacaatt 48568081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 29436628 - 29436535
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  29436628 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 29436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 39856784 - 39856877
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  39856784 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 39856877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 47487586 - 47487679
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| | ||||||| | | |||||||| | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  47487586 ttgacacttgaataccagcattcaagaggcttatcgaatattggagtcatgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 47487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 13284059 - 13284109
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||   ||||||||||||||||| ||||||||||    
T  13284059 ggtattgaagtgtcaaggaaatgacctcattcttttgacatttgaatacca 13284109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 22528162 - 22528092
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||||||  |||||||||| | ||| ||| || ||||| ||||| ||| ||||||||||||    
T  22528162 ttgacacttgaataccattgttcaagatgctcatcaaatgctggagtcctgccgattaacaagtttgaatt 22528092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 24363661 - 24363611
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||| ||||||||||||||||||| ||||||| | |||||||    
T  24363661 ggtattgaagtgttaaggaatgcacctcattctgttgacacgtcaatacca 24363611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 41874439 - 41874509
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| | ||||||||| | |||||||  | ||||| ||||| ||| ||||||||||||    
T  41874439 ttgacacttgaataccagcattcaagatgcttatcgaatgttggagtcatgccgattaacaagtttgaatt 41874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 17686071 - 17686034
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  17686071 gcaagtttgaatttacctcattcagaggtaacacaatt 17686034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 35586780 - 35586731
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||  |||||||||    
T  35586780 ggtattgaagtgtcaatgaatggacctcattcttttgacttttgaatacc 35586731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 38046282 - 38046233
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| || |||||| ||||| ||||||||||||||||| |||||||||    
T  38046282 ggtattaaaatgtcaacgaatggacctcattcttttgacatttgaatacc 38046233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 50067971 - 50067934
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  50067971 gcaagtttgaatttgccccattcaaaggtaagacaatt 50067934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 13284191 - 13284231
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  13284191 ttagcaagtttgaatttgccccattcaagggtaagacaatt 13284231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 17373214 - 17373254
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| |||||||||| ||| ||||||||    
T  17373214 ttagcaagtttgaatttacctcattcaggggttagacaatt 17373254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 18842943 - 18842983
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| || ||||||| ||||||||||||    
T  18842943 ttagcaagtttgaatttaccccattcaggggtaagacaatt 18842983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 24363528 - 24363488
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| || ||||||||| ||||||||||    
T  24363528 ttagcaagtttgaatttaccccattcagagataagacaatt 24363488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 41874601 - 41874561
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  41874601 ttagcaagtttgaatttgctccattcaaaggtaagacaatt 41874561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 45689610 - 45689650
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  45689610 ttagcaagtttgaatttaccccattcaaaggtaagacaatt 45689650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 5e-61; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 1043350 - 1043513
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1043350 tcggcaggactccagcattcgataagcgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 1043449  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  1043450 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 1043513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 45940128 - 45940296
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| ||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45940128 tcggcatgactccatcattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 45940227  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||||||||| ||| | |||||||||||||||||||| ||||||| ||||||| ||||    
T  45940228 tgctgatcgaatactagagtcctgctgcttagcaagtttgaatttgccccattcagtggtaagataatt 45940296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 346 - 512
Target Start/End: Original strand, 885411 - 885577
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  885411 ggcaggactccaacattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 885510  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||| | ||||| ||| | |||||||||||||||||||| |||| ||||| ||| |||||    
T  885511 ttgatcgaatattggagtcctgctgcttagcaagtttgaatttgccccatttagaggcaaggcaatt 885577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 9490083 - 9490246
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| ||||||||  |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9490083 tcgggaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 9490182  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || ||||||||| || ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  9490183 tgctgatcgaattctggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 9490246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 40353379 - 40353216
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40353379 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 40353280  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  40353279 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 40353216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 49095346 - 49095509
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49095346 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49095445  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  49095446 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 49095509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 56139511 - 56139674
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||    
T  56139511 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccagcgttataga 56139610  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||  ||  |||||||||||||||||||||| ||||||| |||||||    
T  56139611 tgctgatcgaatactggagttctgttggttagcaagtttgaatttgccccattcagtggtaaga 56139674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 28082838 - 28083001
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||    
T  28082838 tcggcaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactagtgttcaaga 28082937  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  28082938 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 28083001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 31824292 - 31824124
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  31824292 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 31824193  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| |||   |||||||||||||||||||| ||||||| ||||||| ||||    
T  31824192 tgttgatcgtatgttggagtcctgctacttagcaagtttgaatttgccccattcagtggtaagataatt 31824124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 6176883 - 6176758
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  6176883 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 6176784  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  6176783 tgaatttgccccattcagtggtaaga 6176758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 21016745 - 21016620
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  21016745 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 21016646  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  21016645 tgaatttgccccattcagtggtaaga 21016620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 27759930 - 27760098
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  27759930 tcggcaggactccaacattcgataagcctcttgaatgttggtattcaaatgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 27760029  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |  |||||| ||  | ||||| ||| |||||||||||||||||||||| ||||||| ||||||| ||||    
T  27760030 ttctgatcgtatgtttgagtcctgctggttagcaagtttgaatttgccccattcagtggtaagataatt 27760098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 364 - 498
Target Start/End: Original strand, 47870719 - 47870850
Alignment:
Q  364 gataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagt 463  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||    
T  47870719 gataagcatcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga---tgatcgaatactggagt 47870815  T
Q  464 cttgccggttagcaagtttgaatttgcctcattca 498  Q
    | ||| | |||||||||||||||||||| ||||||    
T  47870816 cctgctgtttagcaagtttgaatttgccccattca 47870850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 21712132 - 21712300
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||| | ||| ||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  21712132 tcggcagaagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 21712231  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||| | |||| ||||||||||||||| |||| || || |||||||||    
T  21712232 tgttgatcgtatgttggagtcctgctgcttaggaagtttgaatttgccccatttaggggcaagacaatt 21712300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 55797344 - 55797507
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  55797344 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaatgaatgcacctcattctgttgacacttgaataccagcgttcaaga 55797443  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || | |||||| ||| | ||| ||| | || ||||||||||||||||| ||||||| |||||||    
T  55797444 tgctaatcgaacactggtgtcctgctgcttggcaagtttgaatttgccccattcagtggtaaga 55797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 6282069 - 6281939
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||||||| | ||||||||||    
T  6282069 tggtattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcttgctgtttagcaagtt 6281970  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||||||| ||||||| ||||    
T  6281969 tgaatttgccccattcagtggtaagataatt 6281939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 4784935 - 4784810
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||||| || ||||| ||| | ||| ||||||    
T  4784935 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgttgatcgaatgctggagtcctgcagtttaacaagtt 4784836  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    ||||||| |||||||||||| |||||    
T  4784835 tgaatttacctcattcagagataaga 4784810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 46816129 - 46815961
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| || ||| ||||| ||||||| |||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||    
T  46816129 tcggcaagaatccaacattcgataagcctcttcaatgttggtattcaagtgtcatggaatgcacctcattcttttgacacttgaataccgtcattcaaga 46816030  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || | |||||||| | ||||| ||| | |||||||||||||||||||| ||||||  || |||||||||    
T  46816029 tgcttatcgaatattggagtcctgctgcttagcaagtttgaatttgccccattcatgggcaagacaatt 46815961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 957056 - 956889
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||||||||||| |||| ||  |||||||| |||||||||||||||||| |||||||||||||||||||||| || | ||||||||    
T  957056 cggcaggaatccagcatttgataagcatcttgaatactggtattgaagtgtcaaggaatgcacatcattcttttgacacttgaatatcatcattcaagat 956957  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  956956 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccattcaagggtaagataatt 956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 36776120 - 36775953
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| ||||| | |||| ||  || ||||| ||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||    
T  36776120 cggcaggaatccaacattcgataaacatcttgaatacttgtattgaagtgtcaaagaatgcacctcattcttttgacacttgaacaccatcattcaagat 36776021  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||||||||||  ||||||| ||||    
T  36776020 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgcctcattcaagggtaagataatt 36775953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 488
Target Start/End: Complemental strand, 14330207 - 14330101
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||| ||||||| ||| | |||| |||||    
T  14330207 tggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagatgttgatagaatattagagtcctgctgtttaggaagtt 14330108  T
Q  482 tgaattt 488  Q
    |||||||    
T  14330107 tgaattt 14330101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 22437554 - 22437684
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| |  || ||||| ||| | ||||||||||    
T  22437554 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggaggctggagtcctgctgtttagcaagtt 22437653  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||  ||||||| ||||||| ||||    
T  22437654 tgaatttgctccattcagtggtaagataatt 22437684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 49791500 - 49791383
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  49791500 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 49791401  T
Q  482 tgaatttgcctcattcag 499  Q
    ||||||| || |||||||    
T  49791400 tgaatttaccccattcag 49791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 492
Target Start/End: Complemental strand, 38132716 - 38132576
Alignment:
Q  352 actccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatc 451  Q
    ||||| |||||  |||||| |||| || || ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||    
T  38132716 actccaacattctataagcatcttgaatgccggtattcaagtgtcaaggaatgcacatcattcttttgacacttgaataccatcattcaagatgttaatc 38132617  T
Q  452 gaatactagagtcttgccggttagcaagtttgaatttgcct 492  Q
    | || || ||||| ||| | ||| |||||||||||||||||    
T  38132616 gtatgctggagtcctgctgcttaacaagtttgaatttgcct 38132576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 2773652 - 2773782
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||| |||| ||  | ||||| ||| | ||||||||||    
T  2773652 tggtattcaagtgtcaaggaatgcacctcattctttttacagttgaataccaacattcaaaatgttcatcggatgttggagtcctgctgtttagcaagtt 2773751  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||  ||||||| ||||||| ||||    
T  2773752 tgaatttgctccattcagtggtaagataatt 2773782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 42886885 - 42887052
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    ||||| |||||| ||||| ||| ||| | ||||| | |||||||||||||| ||| |||||||||||||||| |||||||||||||||| | || || ||    
T  42886885 cggcatgactccaacattcgatgagcattttaaatgatggtattcaagtgttaagaaatgcacctcattcttctgacacttgaataccatcatttaaaat 42886984  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |   |||||||| | ||||| ||| | ||||||||||||||||| || ||||||||||||||| ||||    
T  42886985 gccaatcgaatattggagtcctgctgtttagcaagtttgaatttaccccattcagaggtaagataatt 42887052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 21170093 - 21170223
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| | || || ||| | |||| || || ||||| ||| | ||||||||||    
T  21170093 tggtattcaagtgtcaaggaatgcacctcattcttttgacagttgaataccatcatttaaaatgctcatcgcatgctggagtcctgctgtttagcaagtt 21170192  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||||||  ||||||| ||||    
T  21170193 tgaatttgccccattcaagggtaagataatt 21170223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 34529360 - 34529230
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||  ||||| | |||| ||  | ||||| ||| | ||||||||||    
T  34529360 tggtattcaagtgttaaggaatgcacatcattcttttgacacttgaataccatcgttgcagatgctcatcggatgttggagtcctgctgtttagcaagtt 34529261  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||| || ||||||| ||||    
T  34529260 tgaatttgcctcatttagtggtaagataatt 34529230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 14290002 - 14289901
Alignment:
Q  387 ttcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaat 486  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||| ||||||| ||  | |||| ||||||||||    
T  14290002 ttcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagatgttgatagaatattagagtcctgttgtttaggaagtttgaat 14289903  T
Q  487 tt 488  Q
    ||    
T  14289902 tt 14289901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 408 - 512
Target Start/End: Original strand, 37867160 - 37867264
Alignment:
Q  408 ctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||  |||||||    
T  37867160 ctcattcctttgacacttgaataccagcgttcaagatgctgatcgaatactggagtcctgctgtttagcaagtttgaatttgccccattcaatggtaaga 37867259  T
Q  508 caatt 512  Q
     ||||    
T  37867260 taatt 37867264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 241998 - 241871
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| | || || ||||| |||| || || ||||| ||| | |||||||||||||    
T  241998 tattcaagtgtcaaagaatgcacctcattcttttgacatttgaataccatcatttaaaatgttcatcgcatgctggagtcctgcggtttagcaagtttga 241899  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||||||  ||||||| ||||    
T  241898 atttgccacattcaagggtaagataatt 241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 51427753 - 51427626
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||  || || ||||| ||| | |||||||||||||    
T  51427753 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatctcatgctggagtcctgctgtttagcaagtttga 51427654  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||||||  ||||||| ||||    
T  51427653 atttgccccattcaagggtaagataatt 51427626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 43889065 - 43888935
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||||||| | ||| ||||||    
T  43889065 tggtatccaagtgccaaggaatgcatctcattcttttgacacttgaataccatctttcaagatgctcatcgcatgttggagtcttgctgtttaacaagtt 43888966  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || |||| |||||||||| ||||    
T  43888965 tgaatttaccccatttagaggtaagataatt 43888935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 49571755 - 49571861
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | || |||||| |||||| ||  | ||||| ||| | |||||||||||||    
T  49571755 tattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattaaagatgctgatcggatgttggagtcatgctgcttagcaagtttga 49571854  T
Q  485 atttgcc 491  Q
    |||||||    
T  49571855 atttgcc 49571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 36499794 - 36499725
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36499794 tatagtactagatttatctatagaaatagtaaatcccgccctacctgcttgtcgacgaacccaaccaagt 36499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 489
Target Start/End: Original strand, 49064651 - 49064781
Alignment:
Q  359 catttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatact 458  Q
    |||||||| ||| |||| || | |||||||||||||||||||||||||||||||||||||| |||||||||  |  | || || ||||| |||||||||     
T  49064651 catttgatgagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttggcacttgaatgtcgtcatttaaaatgttcatcgaatacc 49064750  T
Q  459 agagtcttgccggttagcaagtttgaatttg 489  Q
    |||||| ||| | |||| |||||||||||||    
T  49064751 agagtcctgcagtttagaaagtttgaatttg 49064781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 512
Target Start/End: Complemental strand, 49423320 - 49423191
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 482  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |  | ||||||||| | |||| || || ||||| ||  | ||| |||||||    
T  49423320 ggtattcaagtgtcaaggaatgcacctcattcttttgacaattgaatatcctcattcaagatgctcatcgcatgctggagtcctgttgtttatcaagttt 49423221  T
Q  483 gaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| || ||||||| ||||||| ||||    
T  49423220 gaatttaccccattcaggggtaagataatt 49423191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 55524696 - 55524627
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  55524696 tatagtactagatttatctatagaaatagtaaattccgccctacccgcttgtcaacgaacccaaccaagt 55524627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 433
Target Start/End: Complemental strand, 49817493 - 49817442
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49817493 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 49817442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 670
Target Start/End: Original strand, 45246144 - 45246209
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  45246144 gtactagatttatctgtagaaatagtaaattcagccctacccgcttgtcgacgaatccaaccaagt 45246209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 10312625 - 10312675
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10312625 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 10312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 512
Target Start/End: Complemental strand, 34152823 - 34152721
Alignment:
Q  410 cattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagaca 509  Q
    |||||||||||||||||||||||| | ||||||||||| |||| || || ||||| ||| | ||||||||||||||||| || ||||||  ||||||| |    
T  34152823 cattcttttgacacttgaataccatcattcaagatgttcatcgcatgctggagtcatgctgtttagcaagtttgaatttaccccattcaagggtaagata 34152724  T
Q  510 att 512  Q
    |||    
T  34152723 att 34152721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 49817050 - 49817000
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49817050 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 49817000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 4785271 - 4785221
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  4785271 ggtattgaagtgtcaaggaatgcacctcattcttttaacacttgaatacca 4785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 17211622 - 17211672
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17211622 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacca 17211672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 24607086 - 24607136
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  24607086 ggtattgaagtgtcaaggaatgcacctcattcttttgactcttgaatacca 24607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 32937774 - 32937724
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  32937774 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttaaatacca 32937724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 49423606 - 49423557
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  49423606 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacc 49423557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 1043404 - 1043311
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||||||||||| | | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  1043404 ttgacacttgaataccaacgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 1043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 25763250 - 25763341
Alignment:
Q  421 cacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||| | ||||||||| | | | ||||| || ||||| ||| | |||||||||||||||||||||||||||| ||||||| ||||    
T  25763250 cacttgaatacgagcgttcaagacgcttaccgaatgctggagtcatgctgcttagcaagtttgaatttgcctcattcagtggtaagataatt 25763341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 37867159 - 37867100
Alignment:
Q  428 ataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||| ||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||    
T  37867159 ataccagcgttcaagatgctgatcgaatactggagtcctgctggttagcaagtttgaatt 37867100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 21169809 - 21169859
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  21169809 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 21169859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 24607411 - 24607461
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  24607411 ggtattaaagtgtcaaggaacggacctcattcttttgacacttgaatacca 24607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 28082892 - 28082822
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| ||||| ||| ||||||||||||    
T  28082892 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctgccgattaacaagtttgaatt 28082822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 672
Target Start/End: Original strand, 22181572 - 22181637
Alignment:
Q  607 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtta 672  Q
    ||||||| ||||| |||||||||||||||| |||||  ||||||||||| |||||||| |||||||    
T  22181572 actagatttatctatagaaatagtaaatccggcccttgccgcttgtcgatgaacccaaacaagtta 22181637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 32937450 - 32937401
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  32937450 ggtattgaagtgtcaaggaatgtacctcattcttttgacacttcaatacc 32937401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 42886624 - 42886673
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  42886624 ggtattgaagtgtcaaggaatatacctcattcttttgacacttgaatacc 42886673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 6176867 - 6176960
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  6176867 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 6176960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 21016729 - 21016822
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  21016729 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 21016822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 512
Target Start/End: Complemental strand, 39589592 - 39589491
Alignment:
Q  409 tcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagac 508  Q
    |||||||||||||| |||||||||| |||| |||| | | ||||||| || ||||| | ||||||| |||||||||| ||||| ||| |||| |||||||    
T  39589592 tcattcttttgacaattgaataccagcgttgaagacgcttatcgaatgctggagtcctaccggttaacaagtttgaa-ttgccccatccaga-gtaagac 39589495  T
Q  509 aatt 512  Q
    ||||    
T  39589494 aatt 39589491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 40353325 - 40353396
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| ||| |||||||||||||    
T  40353325 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattaacaagtttgaattt 40353396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 49095400 - 49095307
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  49095400 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 49095307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 55797398 - 55797305
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| |||| ||||||||| ||||| ||| ||| ||||||||||||    
T  55797398 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattagtaagtttgaa-ttgccccatccag-ggtaagacaatt 55797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 957304 - 957254
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  957304 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaacacca 957254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 3393657 - 3393707
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||||    
T  3393657 ggtattgaagtgtcaaggaatgcatttaattcttttgacacttgaatacca 3393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 34153135 - 34153085
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||||||||    
T  34153135 ggtattgaagtgtcaaggaacggacctcattcttttgacatttgaatacca 34153085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 2773367 - 2773416
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  2773367 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 2773416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 36776368 - 36776319
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||||||||    
T  36776368 ggtattgaagtgtcaatgaatgaacctcattcatttgacacttgaatacc 36776319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 427
Target Start/End: Original strand, 18412962 - 18412994
Alignment:
Q  395 tcaaggaatgcacctcattcttttgacacttga 427  Q
    |||||||||||||||||||||||||||||||||    
T  18412962 tcaaggaatgcacctcattcttttgacacttga 18412994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 512
Target Start/End: Original strand, 34529347 - 34529437
Alignment:
Q  420 acacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||  |||||||||| | |||| || ||||| || ||||| ||| |||||||||| ||||| |||||||||| |||||||||    
T  34529347 acacttgaataccattgttcaagatgctcatcgcatgctagattcatgccgtttaacaagtttgaa-ttgccccattcagagg-aagacaatt 34529437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 433
Target Start/End: Original strand, 49571461 - 49571513
Alignment:
Q  381 ctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||||| |||||||||| |||| ||||||||||||||| | ||||||||||    
T  49571461 ctggtattgaagtgtcaagaaatgtacctcattcttttgatatttgaatacca 49571513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 56139566 - 56139472
Alignment:
Q  416 tttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  56139566 tttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 56139472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 14330191 - 14330284
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||   ||||||||| | ||||||| || ||||||| ||| ||| |||||||||| || ||||||||| ||| |||||||||    
T  14330191 ttgacacttgaataccattattcaagatgcttatcgaatgctggagtcttaccgtttaacaagtttgaa-ttacctcattcaaagg-aagacaatt 14330284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 45940182 - 45940112
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  45940182 ttgacacttgaataccagcgttcaagacgcttatcgaatgatggagtcatgccgattaacaagtttgaatt 45940112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 512
Target Start/End: Original strand, 49571577 - 49571639
Alignment:
Q  450 tcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| | ||||| ||| | || |||||||||||||| ||||||||| |||||||||||||    
T  49571577 tcgaatattggagtcatgctgcttggcaagtttgaatttacctcattcaaaggtaagacaatt 49571639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 49791777 - 49791735
Alignment:
Q  391 agtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||    
T  49791777 agtgtcaacgaatggacctcattcttttgacatttgaatacca 49791735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 34153000 - 34152963
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  34153000 gcaagtttgaatttacctcattcaaaggtaagacaatt 34152963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 512
Target Start/End: Complemental strand, 34529542 - 34529473
Alignment:
Q  443 atgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| ||||||||| | ||||| ||| | || |||||||||||||| ||||||||| |||||| ||||||    
T  34529542 atgtcgatcgaatattggagtcctgctgcttggcaagtttgaatttacctcattcaaaggtaacacaatt 34529473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 34529645 - 34529596
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| || ||||||    
T  34529645 ggtattgaagtgtcaacgaatggacctcattcttttgacatttcaatacc 34529596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 38132833 - 38132796
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  38132833 gcaagtttgaatttgccccattcaaaggtaagacaatt 38132796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 39589535 - 39589584
Alignment:
Q  349 aggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaa 398  Q
    ||||||||  |||| |||||||||||| ||||||||||||||| ||||||    
T  39589535 aggactccagcattcgataagcgtcttcaacgctggtattcaattgtcaa 39589584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 46816238 - 46816201
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  46816238 gcaagtttgaatttacctcattcaaaggtaagacaatt 46816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 3e-59; HSPs: 103)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 11378580 - 11378412
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11378580 tcggcaggactccagaattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 11378481  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || | |||||||||||||||| ||| |||||||||||||||||||||| |||||||||  |||||||||    
T  11378480 tgataatcgaatactagagtcctgctggttagcaagtttgaatttgccccattcagagacaagacaatt 11378412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 13895486 - 13895318
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||| | ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13895486 tcggcaggacttcaacattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13895387  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||| ||||    
T  13895386 tgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaagataatt 13895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 51695537 - 51695374
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51695537 tcggcaggactccagcattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 51695438  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  51695437 tgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 51695374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 346 - 488
Target Start/End: Complemental strand, 34692891 - 34692749
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34692891 ggcaggactccaacattcgataagcgtcttggacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatg 34692792  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||    
T  34692791 ttgatcgaatactggagtcctgctggttagcaagtttgaattt 34692749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 44928079 - 44928247
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  44928079 tcggaaggactccaacattcgataagcatcttgaacgctggtattcaagtgtcgaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 44928178  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||| ||||| ||| ||||||||||||| || ||||| |||||||||| |||||||||    
T  44928179 tgctgatcgaatactggagtcctgctggttagcaagtttaaagttgccccattcagaggcaagacaatt 44928247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 2268098 - 2267935
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||| ||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2268098 tcggcagaactccaacattcgataagcctcttaaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 2267999  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||  | |||||||||||||||||||| ||||||| |||||||    
T  2267998 tgctgatcgaatactggtgtcctgttgcttagcaagtttgaatttgccccattcagtggtaaga 2267935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 499
Target Start/End: Original strand, 43477654 - 43477809
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  43477654 tcggcaggactccagcattcgataagcgtcttgaacgctggtattcaagtctcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 43477753  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 499  Q
    || |||||||||||| ||||| ||| ||||||||| |||||||||||| |||||||    
T  43477754 tgctgatcgaatactggagtcctgctggttagcaaatttgaatttgccccattcag 43477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 49218339 - 49218176
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49218339 tcggtaggactccaacattcgataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49218240  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| |||||  || | ||| |||||||||||||| | ||||||| |||||||    
T  49218239 tgctgatcgaatactggagtcccgctgtttaacaagtttgaatttgtcccattcagtggtaaga 49218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 49610777 - 49610940
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  49610777 tcggcaggactccagcatccgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 49610876  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||| |||||| |||||| ||| || ||||||||||||||||||| ||||||| |||||||    
T  49610877 tgctgattgaataccagagtcctgctggatagcaagtttgaatttgccccattcagtggtaaga 49610940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 344 - 505
Target Start/End: Original strand, 50998003 - 50998164
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  50998003 tcggcaggactccagcattcgataagcgtcttgaacactggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccaacattcaaga 50998102  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaa 505  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||    
T  50998103 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaa 50998164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 344 - 491
Target Start/End: Complemental strand, 24701875 - 24701728
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24701875 tcggcaggactccagcattcaataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 24701776  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    || |||||||| | | ||||| ||| | ||||||||||||||||||||    
T  24701775 tgctgatcgaaaaatggagtcctgctgcttagcaagtttgaatttgcc 24701728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 346 - 512
Target Start/End: Original strand, 42383669 - 42383835
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  42383669 ggcaggactccaacattcgataagcctcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatg 42383768  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     |||||||||| | ||||| ||| | |||||| |||||||||||||  |||||| || |||||||||    
T  42383769 ctgatcgaatattggagtcctgcggcttagcatgtttgaatttgccctattcaggggcaagacaatt 42383835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 34050380 - 34050505
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  34050380 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 34050479  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  34050480 tgaatttgccccattcagtggtaaga 34050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 347 - 512
Target Start/End: Complemental strand, 44835087 - 44834922
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    |||||||||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  44835087 gcaggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgt 44834988  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| ||  | ||||||||  | |||||||||||||||||||| |||||||  | |||||||||    
T  44834987 tgatcgtatgttggagtcttgttgcttagcaagtttgaatttgccccattcaggagcaagacaatt 44834922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 54391095 - 54391220
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  54391095 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 54391194  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  54391195 tgaatttgccccattcagtggtaaga 54391220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 344 - 504
Target Start/End: Original strand, 36135622 - 36135782
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||| |||||  |||| ||| ||| |||| |||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36135622 tcggcagaactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcagctcattcttttgacacttgaataccagcgttcaaga 36135721  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggta 504  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||||||||||| ||||    
T  36135722 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgcctcattcagtggta 36135782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 47066302 - 47066470
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  47066302 tcggcaggactccaacattcgataagcatcttgaatgttggtattcaagtgtgaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 47066401  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||||||| | || |||||||||||||||||  |||||| || |||||||||    
T  47066402 tgttgatcgtatgttggagtcttgctgcttcgcaagtttgaatttgccctattcaggggcaagacaatt 47066470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 368 - 512
Target Start/End: Complemental strand, 53826599 - 53826455
Alignment:
Q  368 agcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttg 467  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| | ||||||||    
T  53826599 agcgtcttgaacactggtattcaagtgtcaagtaatgcacctcattcttttgacacttgaataccagcgttcaaaatgctgatcgaatattggagtcttg 53826500  T
Q  468 ccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | ||||||||||||| |||||| ||||||  ||||||||||||    
T  53826499 ctgcttagcaagtttgagtttgccccattcatgggtaagacaatt 53826455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 353 - 512
Target Start/End: Complemental strand, 39416541 - 39416382
Alignment:
Q  353 ctccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcg 452  Q
    |||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39416541 ctccaacatttgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcg 39416442  T
Q  453 aatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     ||  | ||||| | | | ||| |||||||||||||||| ||||||| ||||||| ||||    
T  39416441 tatgttggagtcctactgcttaacaagtttgaatttgccccattcagtggtaagataatt 39416382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 49139658 - 49139495
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||| ||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49139658 tcggcaggactccagtattcgatgagcatcttagacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 49139559  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || | |||||||||| ||||| ||| | ||||||||||||||||||||  |||||| |||||||    
T  49139558 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccctattcagtggtaaga 49139495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 2646442 - 2646317
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| || || ||| | ||||||||||    
T  2646442 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgcttatcgaatactggattcctgctgcttagcaagtt 2646343  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  2646342 tgaatttgccccattcagtggtaaga 2646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 25576194 - 25576031
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| ||||||| |||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||    
T  25576194 tcggcatgactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcaatcttttgacacttgaatatcatcattcaaga 25576095  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||| |||| || |||||||    
T  25576094 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgccccatttagtggtaaga 25576031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 36720936 - 36720769
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||||||| ||||| ||||||| |||| ||   | |||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||    
T  36720936 cggcaggactccaacattcgataagcatcttgaataattgtattcaagtgtcaaggaatgcacctcattcttttgacacttaaatatcatcattcaagat 36720837  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||| | ||||| | | | ||||||||||||||||| |||||||||  ||||||| ||||    
T  36720836 gttgatcgaatattggagtcctacagtttagcaagtttgaatttacctcattcaagggtaagataatt 36720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 34471675 - 34471508
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||| ||||||| |||| ||  || ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34471675 cggcaggaatccagcattcgataagcatcttgaatactagtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 34471576  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  34471575 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccattcaagggtaagataatt 34471508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 385 - 498
Target Start/End: Complemental strand, 46346171 - 46346058
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| || || ||||| ||| | |||||||||||||    
T  46346171 tattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcggatgctggagtcctgctgcttagcaagtttga 46346072  T
Q  485 atttgcctcattca 498  Q
    ||||||| ||||||    
T  46346071 atttgccccattca 46346058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 52568985 - 52568845
Alignment:
Q  372 tcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccgg 471  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||  | ||||| ||  |     
T  52568985 tcttaaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgaatgttggagtcatgttgt 52568886  T
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| | ||||||| ||||||| ||||    
T  52568885 ttagcaagtttgaatttgtcacattcagtggtaagataatt 52568845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 46413920 - 46413753
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| ||||||| |||| ||   |||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||    
T  46413920 cggcaggaatccaacattcgataagcatcttgaataatggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattgaagat 46413821  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     || |||| || || ||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  46413820 attcatcgcatgctggagtcctgcggtttagcaagtttgaatttgccccattcaagggtaagataatt 46413753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 3494595 - 3494470
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| |||||| |||||||||||| | ||| ||| | ||  ||||||    
T  3494595 tggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagtgtttaagatgctgatcgaatactggtgtcctgctgcttgacaagtt 3494496  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  3494495 tgaatttgccccattcagtggtaaga 3494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 504
Target Start/End: Complemental strand, 55268657 - 55268501
Alignment:
Q  348 caggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 447  Q
    ||||||||||||||  ||| ||| |||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |    
T  55268657 caggactccgacatccgatgagcatctgcaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgct 55268558  T
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggta 504  Q
     |||| ||    ||||| ||| | |||||||||||||||||||| ||||||| ||||    
T  55268557 catcggatgtcggagtcctgctgtttagcaagtttgaatttgccccattcagtggta 55268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 34646814 - 34646647
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| || || | |||| || | ||||||||||||||||| |||||||||||||||||||||||||||||||||| | || || ||    
T  34646814 cggcaggaatccaacattcgaaaaacatcttgaatgatggtattcaagtgtcaacgaatgcacctcattcttttgacacttgaataccatcatttaaaat 34646715  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |   |||||||||| ||||| ||| | ||||||||||||||||| || |||| |||||||||| ||||    
T  34646714 gcgcatcgaatactggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaagataatt 34646647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 41578525 - 41578692
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||| ||| ||| |||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  41578525 cggcaggaatccagcattcgatgagcctcttgaatgctgggattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagat 41578624  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||  ||  | ||||| ||| | ||||||||||||||||| |  ||||||| ||||||| ||||    
T  41578625 gttgatcagatgttggagtcatgctgcttagcaagtttgaattttcgccattcagtggtaagataatt 41578692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 51012849 - 51012719
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  51012849 tggtattcaagtgtcaaggaatgcacctcgttcttttgacacttgaatgccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 51012750  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  51012749 tgaattttccccattcagtggtaagataatt 51012719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 380 - 512
Target Start/End: Original strand, 2429142 - 2429274
Alignment:
Q  380 gctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaag 479  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| || | ||||||||| | |||| |  || ||||| ||| | ||||||||    
T  2429142 gctggtattcaagtgtcaaggaatgcacctcattcttttgagccttgaatatcatcattcaagatgctcatcggacgctggagtcctgctgtttagcaag 2429241  T
Q  480 tttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| | ||||||| ||||    
T  2429242 tttgaatttgcctcattctgtggtaagagaatt 2429274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 389 - 512
Target Start/End: Complemental strand, 42322953 - 42322830
Alignment:
Q  389 caagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||| |||||||||||||    
T  42322953 caagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcgtgctgtttaacaagtttgaattt 42322854  T
Q  489 gcctcattcagaggtaagacaatt 512  Q
     || |||| |||||||||| ||||    
T  42322853 accccatttagaggtaagaaaatt 42322830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 19452709 - 19452579
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| | || | ||  |  |||| ||| | |||||||||     
T  19452709 tggtattcaagtgtcaaggaatgcacctcattcttttgacactttaataccatcattcaagatgctcattggattatgcagtcctgctgtttagcaagtc 19452610  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| ||||||| ||||    
T  19452609 tgaatttgcctcattcagtggtaagataatt 19452579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 39649091 - 39649160
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39649091 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 39649160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 41804559 - 41804684
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  | ||||||||| | |||| || || ||||  ||| | ||| ||||||    
T  41804559 tggtattcaagtgtcaaggaatgctcctcattcttttgacacttgaataccgtcattcaagatgctcatcggatgctggagttatgctgtttaacaagtt 41804658  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||| ||||||||| |||||||    
T  41804659 tgaatttgtctcattcagtggtaaga 41804684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 381 - 512
Target Start/End: Complemental strand, 10052949 - 10052818
Alignment:
Q  381 ctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagt 480  Q
    |||||||| ||||||||||||||||| ||| |||||||||||| |||||||||   |||||||||||||||| ||  | ||||| ||| | ||| |||||    
T  10052949 ctggtattgaagtgtcaaggaatgcatctcgttcttttgacacctgaataccataattcaagatgttgatcggatgttggagtcctgctgtttaacaagt 10052850  T
Q  481 ttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||  ||||||| ||||    
T  10052849 ttgaatttgcctcattcaagggtaagataatt 10052818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 46403656 - 46403719
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46403656 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatg 46403719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 348 - 491
Target Start/End: Original strand, 49274026 - 49274169
Alignment:
Q  348 caggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 447  Q
    ||||| ||| ||||| ||||| | |||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |    
T  49274026 caggaatccaacattcgataaacatcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgct 49274125  T
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    ||| | ||  | ||||  ||| | ||||||||||||||||||||    
T  49274126 gataggatgttggagttctgctgtttagcaagtttgaatttgcc 49274169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 45100037 - 45099907
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | | || || ||| | |||| || || ||||| ||| | ||||||||||    
T  45100037 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacaatcatttaaaatgctcatcgcatgctggagtcctgctgtttagcaagtt 45099938  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||  | ||||||| ||||||| ||||    
T  45099937 tgaatttatcccattcaggggtaagataatt 45099907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 15041348 - 15041417
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15041348 tatagtactggatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 15041417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 34085953 - 34086022
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34085953 tatagtactagatttatctatagaaatagtaaatcccaccctacccgcttgtcgacgaacccaaccaagt 34086022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 7246753 - 7246821
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcg 452  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7246753 gtattcaactgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcg 7246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 55206443 - 55206316
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||  ||||| | |||| || |  ||||| ||| | |||||||||||||    
T  55206443 tattcaagtgacaaggaatgcatctcattcttttgacacttgaataccatcgttgcagatgctcatcggatgcaggagtcctgctgtttagcaagtttga 55206344  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    |||| || ||||||| ||||||| ||||    
T  55206343 attttccccattcagtggtaagataatt 55206316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 512
Target Start/End: Original strand, 14632101 - 14632232
Alignment:
Q  381 ctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagt 480  Q
    |||||||| ||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| | |||| |   | ||||| |||   |||||||||    
T  14632101 ctggtattgaagtgtcaaggaatgcaccccattcttttgacaattgaataccatcattcaagatgctcatcgcaagttggagtcctgctatttagcaagt 14632200  T
Q  481 ttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||| ||||||  ||||||| ||||    
T  14632201 ttgaatttgccccattcaagggtaagataatt 14632232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 433
Target Start/End: Original strand, 7954575 - 7954626
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7954575 tggtaatcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 7954626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 27187685 - 27187735
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27187685 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 27187735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 605 - 670
Target Start/End: Complemental strand, 35063887 - 35063822
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||    
T  35063887 gtactagatttatctgtagaaatagtaaatccagccctagccgcttgtcgatgaatccaaccaagt 35063822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 3494579 - 3494672
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||||| |||||||||||||| ||||| ||| ||| ||||||||||||    
T  3494579 ttgacacttgaataccattgttcaagatgatcatcgaatactggagtcctgccgattagcaagtttgaa-ttgccccatccag-ggtaagacaatt 3494672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 419
Target Start/End: Complemental strand, 4003691 - 4003616
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttg 419  Q
    |||||||||||||  |||| ||| ||| |||| |||  ||||||||||||||||||||||||||||||||||||||    
T  4003691 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttg 4003616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 20375732 - 20375685
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  20375732 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 20375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 15637361 - 15637410
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  15637361 gtattgaagtgtcaaggaatgcacctcattcttttgacacttcaatacca 15637410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 670
Target Start/End: Complemental strand, 35996420 - 35996359
Alignment:
Q  609 tagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||| ||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  35996420 tagatttatctatagaaatagtaaatcctgccctagccgcttttcgacgaacccaaccaagt 35996359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 7955024 - 7955072
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7955024 ggtattgaagtgtcaaggaatgtacctcattcttttgacacttgaatac 7955072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 670
Target Start/End: Complemental strand, 19867696 - 19867635
Alignment:
Q  607 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||| ||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  19867696 actagatttatctatagaaattgtaaatc--gccctacccgcttgtcgacgaacccaaccaagt 19867635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 411 - 507
Target Start/End: Original strand, 51015955 - 51016051
Alignment:
Q  411 attcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||||||||| || ||||||  |||||||    
T  51015955 attcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaagtttgaatttaccccattcaagggtaaga 51016051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 2428859 - 2428909
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  2428859 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 2428909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 8633212 - 8633162
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  8633212 ggtattgaagtgtcaatgattgcacctcattcttttgacacttgaatacca 8633162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 18441114 - 18441164
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  18441114 ggtattgaagtgtcaagggatgcacctcattattttgacacttgaatacca 18441164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 19486188 - 19486238
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  19486188 ggtattgaagtgtcaagggatgcacctcattattttgacacttgaatacca 19486238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 6754575 - 6754624
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  6754575 gtattgaagtgttaaggaatgaacctcattcttttgacacttgaatacca 6754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 25887457 - 25887408
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  25887457 gtattgaagtgtcaagaaatgcacctcattcttttgacacttcaatacca 25887408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 34647114 - 34647065
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34647114 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 34647065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 36135721 - 36135583
Alignment:
Q  372 tcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccg 470  Q
    |||| ||||||||||||||||||||||  |||||  |  ||||| || |||||||||||||||  |||||||||| | ||||||| || ||||  |||||    
T  36135721 tcttgaacgctggtattcaagtgtcaaaagaatgagctgcattcctt-gacacttgaataccattgttcaagatgctcatcgaatgctggagttctgccg 36135623  T
Q  471 gttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     ||| |||||||||| ||||||||| |||| |||||||||||    
T  36135622 attaacaagtttgaa-ttgcctcatccaga-gtaagacaatt 36135583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 42323237 - 42323188
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  42323237 ggtattgaagtgtcaatgaatgtacctcattcttttgacacttgaatacc 42323188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 43570283 - 43570332
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  43570283 gtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 43570332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 49273771 - 49273820
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  49273771 ggtattaaagtgtcaatgaatggacctcattcttttgacacttgaatacc 49273820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 2646373 - 2646496
Alignment:
Q  364 gataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagag 462  Q
    ||||||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  || ||||||| | |||||||||| |||    
T  2646373 gataagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatgctcatcgaatactggag 2646471  T
Q  463 tcttgccggttagcaagtttgaatt 487  Q
    || ||||| ||| ||||||||||||    
T  2646472 tcctgccgattaacaagtttgaatt 2646496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 27187817 - 27187857
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27187817 ttagcaagtttgaatttacctcattcagaggtaagacaatt 27187857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 34471922 - 34471874
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34471922 gtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 34471874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 42949754 - 42949802
Alignment:
Q  380 gctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaa 428  Q
    |||||||||||||||||||||||||||||||||| | || |||||||||    
T  42949754 gctggtattcaagtgtcaaggaatgcacctcattttgttaacacttgaa 42949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 4003637 - 4003730
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  4003637 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 4003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 8632886 - 8632839
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  8632886 tattgaagtgtcaaggaatgtacctcattcttttgacacttcaatacc 8632839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 11378526 - 11378619
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  11378526 ttgacacttgaataccagcgttcaagacgcttatcgaattctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 11378619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 34050396 - 34050303
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  34050396 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 34050303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 45100312 - 45100265
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  45100312 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaata 45100265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 46403672 - 46403579
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  46403672 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 46403579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 54391111 - 54391018
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  54391111 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 54391018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 6464194 - 6464144
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||| |||||||| |||||||||||||| |||||||||||||    
T  6464194 ggtattaaagtgttaaggaatgaacctcattcttttgtcacttgaatacca 6464144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 10053226 - 10053184
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  10053226 aagtgtcaatgaatggacctcattcttttgacacttgaatacc 10053184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 41578277 - 41578327
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||||    
T  41578277 ggtattgaagtgtcaaagaatggacctcattcttttgacatttgaatacca 41578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 46346459 - 46346409
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  46346459 ggtattgaagtgtcaaggaatggacctcattcgtttgacatttgaatacca 46346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 46405725 - 46405783
Alignment:
Q  449 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  46405725 atcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 46405783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 15080435 - 15080511
Alignment:
Q  262 tcatcaattcatcaattaattataagctagaacaagatgaaaagtgattatgagaataagtatccaacccccttacct 339  Q
    ||||||||||| || ||||   ||||||||| ||| | |||||||||||  |||||||||||||||||||||||||||    
T  15080435 tcatcaattcaacatttaaacgtaagctagatcaaaaagaaaagtgattc-gagaataagtatccaacccccttacct 15080511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 41804274 - 41804323
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  41804274 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 41804323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 51015649 - 51015698
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| ||||||    
T  51015649 ggtattgaagtgtcaaggaatgaacctcattcttttcacacttaaatacc 51015698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 55206731 - 55206682
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  55206731 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 55206682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 512
Target Start/End: Original strand, 41578385 - 41578449
Alignment:
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| | ||||| ||| | || |||||||||||||| ||||||||| |||||||||||||    
T  41578385 gatcgaatattggagtcctgctgcttggcaagtttgaatttacctcattcaaaggtaagacaatt 41578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 512
Target Start/End: Complemental strand, 47066353 - 47066263
Alignment:
Q  420 acacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||| ||||||||| | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  47066353 acacttgaataccaacattcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 47066263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 51013125 - 51013077
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  51013125 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatac 51013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 51015956 - 51015880
Alignment:
Q  411 attcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||| ||||| ||| ||||||||||||    
T  51015956 attcttttgacacttgaataccatcattcaagatgctcatcgcatgttggagtcctgccgtttaacaagtttgaatt 51015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 7246466 - 7246513
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  7246466 ggtattgaagtgttaaggaatggacctcattcttttgacatttgaata 7246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 43477708 - 43477615
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| |||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  43477708 ttgagacttgaataccagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 43477615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 49139604 - 49139697
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  ||  |||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  49139604 ttgacacttgaataccattgtctaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 49139697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 49610831 - 49610761
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| ||||||||| | | |||| || || ||||| ||||| ||| ||||||||||||    
T  49610831 ttgacacttgaataccagcgttcaagacgcttatcggatgctggagtcctgccgattaacaagtttgaatt 49610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 50998057 - 50997987
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||||||  |||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  50998057 ttgacacttgaataccagtgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 50997987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 33449001 - 33448952
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| |||||||||  |||| |||| |||||||||||||||||||||||    
T  33449001 gtattgaagtgtcaataaatggaccttattcttttgacacttgaatacca 33448952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 512
Target Start/End: Original strand, 43570558 - 43570647
Alignment:
Q  423 cttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||||||||||||  |||||  ||||||| ||||    
T  43570558 cttgaataccatcattcaagatgctcatcgcatgctggagtcatgctgtttagcaagtttgaatttgcccaattcaagggtaagataatt 43570647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 46414181 - 46414132
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||| | ||||| ||||||||||||||||| |||||||||    
T  46414181 ggtattgaagtgtcgatgaatggacctcattcttttgacatttgaatacc 46414132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 52569121 - 52569084
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  52569121 gcaagtttgaatttacctcattcacaggtaagacaatt 52569084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 52569256 - 52569208
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||| ||||| ||||| ||||||||||| ||||||||    
T  52569256 ggtattgaagtgtcaacgaatggacctcgttcttttgacatttgaatac 52569208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 55268662 - 55268701
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  55268662 ttagcaagtttgaatttgccccattcagagg-aagacaatt 55268701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 7e-57; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 359 - 507
Target Start/End: Original strand, 44051066 - 44051214
Alignment:
Q  359 catttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatact 458  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  44051066 cattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgctgatcgaatact 44051165  T
Q  459 agagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
     ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  44051166 ggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 44051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 364 - 507
Target Start/End: Original strand, 41275698 - 41275841
Alignment:
Q  364 gataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagt 463  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  41275698 gataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgttgatcgaatactggagt 41275797  T
Q  464 cttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    | ||  |||||||||||||||||||||| ||||||| |||||||    
T  41275798 cctgttggttagcaagtttgaatttgccccattcagtggtaaga 41275841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 344 - 497
Target Start/End: Complemental strand, 42168561 - 42168408
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||| |||||  ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  42168561 tcggcagaactccagcatttgataagcgtcttgaacgctgatattcaattgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaaa 42168462  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattc 497  Q
    || |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  42168461 tgctgatcgaatactagagtcttgctgcttagcaagtttgaatttgcctcattc 42168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 28705743 - 28705575
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28705743 tcggcaggactccaacattcgacaagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 28705644  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||| | ||||||||| | |||||||||||||||||||| ||||||  || |||||||||    
T  28705643 tgctgatcgaatattggagtcttgctgcttagcaagtttgaatttgccccattcaagggcaagacaatt 28705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 24861954 - 24862117
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24861954 tcggcaggactccaacattcgataatcgtcttgaacgctagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 24862053  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||  ||||  ||  ||||||||||||||||||||||||||| || |||||||    
T  24862054 tgctgatcgaatacaggagtactgttggttagcaagtttgaatttgcctcatttagtggtaaga 24862117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 22549690 - 22549853
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22549690 tcggcaggactccagcattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttgaaga 22549789  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
     | |||||||||||| ||||| ||  |||||||||||||||| || || ||||||| |||||||    
T  22549790 cgctgatcgaatactggagtcatgttggttagcaagtttgaactttccccattcagtggtaaga 22549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 15031927 - 15031759
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  ||||  || ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15031927 tcggcaggactccagcattcaatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 15031828  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||| ||||    
T  15031827 tgctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccacattcagtggtaagataatt 15031759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 484823 - 484698
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||  ||| | ||||||||||    
T  484823 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagttctgctgcttagcaagtt 484724  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  484723 tgaatttgccccattcaggggtaaga 484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 344 - 458
Target Start/End: Original strand, 26452923 - 26453037
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26452923 tcggcaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 26453022  T
Q  444 tgttgatcgaatact 458  Q
    || |||| |||||||    
T  26453023 tgctgatagaatact 26453037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 488
Target Start/End: Original strand, 40415869 - 40416013
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||| ||| ||||| ||||||| |||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  40415869 tcggcaggagtccaacattcgataagcatcttgaattctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 40415968  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||    
T  40415969 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaattt 40416013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 349 - 512
Target Start/End: Complemental strand, 38033522 - 38033359
Alignment:
Q  349 aggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 448  Q
    |||||||| ||||| ||||||| |||| ||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  38033522 aggactccaacattcgataagcatcttgaaaaatggtattaaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgatg 38033423  T
Q  449 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| ||  | ||||||||  | |||||||||||||||||||||| ||||  ||||||| ||||    
T  38033422 atcggatgttggagtcttgttgtttagcaagtttgaatttgcctccttcaagggtaagataatt 38033359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 347 - 512
Target Start/End: Complemental strand, 18439891 - 18439726
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    |||||| ||| ||||| ||| ||| |||| || | |||||||||||||||||  |||| |||||||||||||||||||||||||||| | ||||||||||    
T  18439891 gcaggaatccaacattcgatgagcctcttgaatgttggtattcaagtgtcaaataatgtacctcattcttttgacacttgaataccatcattcaagatgt 18439792  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| ||  |  |||||||| | |||||||||||||||||||| ||||||| ||||||| ||||    
T  18439791 tgatcggatgttgcagtcttgctgcttagcaagtttgaatttgccccattcagtggtaagataatt 18439726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 344 - 456
Target Start/End: Complemental strand, 33799353 - 33799241
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |||||||    
T  33799353 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgttaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 33799254  T
Q  444 tgttgatcgaata 456  Q
    || ||||||||||    
T  33799253 tgctgatcgaata 33799241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 43637358 - 43637199
Alignment:
Q  352 actccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatc 451  Q
    ||||| ||||| ||||||| |||| || |||| ||||||||||||||| |||||||||||||| ||||||||| |||||||  | ||||||||| | |||    
T  43637358 actccaacattcgataagcctcttgaatgctgatattcaagtgtcaagaaatgcacctcattc-tttgacactagaataccgtcattcaagatgctcatc 43637260  T
Q  452 gaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||| | ||||| ||| | |||||||||||||||||||| | ||||| || |||||||||    
T  43637259 gaatattggagtcctgcagtttagcaagtttgaatttgccactttcaggggcaagacaatt 43637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 42604104 - 42604234
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| | |||| ||    ||||| || || ||||||||||    
T  42604104 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgctcatcggatgtcggagtcctgtcgtttagcaagtt 42604203  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| |||| || ||||||| ||||    
T  42604204 tgaatttgccccatttagtggtaagataatt 42604234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 40703004 - 40703144
Alignment:
Q  372 tcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccgg 471  Q
    ||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||  | ||| | || | || || ||||| ||| |     
T  40703004 tcttaaacaatggtatttaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcgttgcatatgctcattggatgctggagtcctgctgt 40703103  T
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||| ||||||| ||||||| ||||    
T  40703104 ttagcaagtttgaatttgccccattcagtggtaagataatt 40703144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 41856530 - 41856404
Alignment:
Q  386 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||  | |||  || || ||||| ||  | ||||||||||||||    
T  41856530 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaatatactcatcagatgctggagtcctgttgtttagcaagtttgaa 41856431  T
Q  486 tttgcctcattcagaggtaagacaatt 512  Q
    ||| || ||||||| ||||||| ||||    
T  41856430 ttttccccattcagtggtaagataatt 41856404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 34277138 - 34277069
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34277138 tatagtactagatttatatatagaaatagtaaatcccgctctacccgcttgtcgacgaacccaaccaagt 34277069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 41017351 - 41017288
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcac 407  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  41017351 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcac 41017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 28167439 - 28167565
Alignment:
Q  386 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||| |||  || || ||||| | |   ||| ||||||||||    
T  28167439 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgttcatcacatgctggagtcctactatttaacaagtttgaa 28167538  T
Q  486 tttgcctcattcagaggtaagacaatt 512  Q
    ||| || ||||||| ||||||| ||||    
T  28167539 tttaccccattcaggggtaagataatt 28167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 16576024 - 16576074
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16576024 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 16576074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Original strand, 2417622 - 2417665
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacactt 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2417622 tggtattcaagtgtcaaggaatgcacctcattcttttgacactt 2417665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 41275732 - 41275639
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | |||||||||||||||| ||| | ||| |||||||||| ||||||||| |||| |||||||||||    
T  41275732 ttgacacttgaataccagcgttcaagacgcttatcgaatactagagtcctgctgattaacaagtttgaa-ttgcctcatccaga-gtaagacaatt 41275639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 16576349 - 16576399
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16576349 ggtattcaagtgtcaaggaattcacctcgttcttttgacacttgaatacca 16576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 18440141 - 18440091
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  18440141 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 18440091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 44942927 - 44942877
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  44942927 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 44942877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 484807 - 484900
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  484807 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 484900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 37780512 - 37780562
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||||    
T  37780512 ggtattaaagtgtcaacgaatggacctcattcttttgacatttgaatacca 37780562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 512
Target Start/End: Complemental strand, 22549793 - 22549651
Alignment:
Q  368 agcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtctt 466  Q
    |||||||| ||||||||||||||||||||||  |||||     ||||| || ||||||||||||||| |||||||||   | ||||||| || ||||| |    
T  22549793 agcgtcttcaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagcgttcaagacacttatcgaatgctggagtcct 22549695  T
Q  467 gccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  22549694 gccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 22549651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 40702729 - 40702778
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  40702729 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 40702778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 501
Target Start/End: Complemental strand, 41363975 - 41363911
Alignment:
Q  437 ttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 501  Q
    |||||||||||||||| ||  | ||||| ||| | |||||||||||||||||||||||| |||||    
T  41363975 ttcaagatgttgatcggatgttggagtcctgctgtttagcaagtttgaatttgcctcatccagag 41363911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 15031873 - 15031966
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | || |||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  15031873 ttgacacttgaataccattgttcaagatgctcattgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 15031966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 41017297 - 41017390
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  41017297 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 41017390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 512
Target Start/End: Complemental strand, 18440031 - 18439969
Alignment:
Q  450 tcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||||||| ||| | || |||||||||||||| ||||||||| || ||||||||||    
T  18440031 tcgaatattagagtcctgctgcttggcaagtttgaatttacctcattcaaagataagacaatt 18439969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 26452977 - 26452907
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||| || ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  26452977 ttgacacttgaatatcagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 26452907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 41856811 - 41856769
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||    
T  41856811 aagtgtcaacgaatggacctcattcttttgacatttgaatacc 41856769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 19242007 - 19241959
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    ||||| |||||||||  |||| ||||||||||||||| |||||||||||    
T  19242007 gtattgaagtgtcaataaatgaacctcattcttttgaaacttgaatacc 19241959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 19315191 - 19315143
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    ||||| |||||||||  |||| ||||||||||||||| |||||||||||    
T  19315191 gtattgaagtgtcaataaatgaacctcattcttttgaaacttgaatacc 19315143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 31171662 - 31171614
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||| |||||||| |||||||||||||||||||||| | || |||||||    
T  31171662 tattgaagtgtcacggaatgcacctcattcttttgatagttcaatacca 31171614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 7e-57; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 22493878 - 22494046
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22493878 tcggcaggactccaacatttgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataacaacgttcaaga 22493977  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || ||||| |||| | ||||| ||  | |||||||||||||||||||| ||||||| || |||||||||    
T  22493978 tgctgatcaaatattggagtcctgttgcttagcaagtttgaatttgccccattcaggggcaagacaatt 22494046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 348 - 507
Target Start/End: Original strand, 3942019 - 3942178
Alignment:
Q  348 caggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 447  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  3942019 caggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgagacttgaataccagcgttcaagatgct 3942118  T
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||| ||||||  |||||||    
T  3942119 gatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcaatggtaaga 3942178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 346 - 512
Target Start/End: Original strand, 5420749 - 5420915
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  5420749 ggcaggactccaacattcgataaacgtcttgaacgttgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagtgttcaagatg 5420848  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  5420849 ctgatcgaatactggagtcctgctggttagcaagtttgaatttgcctcattcagaggcaagacaatt 5420915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 29073649 - 29073812
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| ||||||  |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  29073649 tcggcaagactccagcatttgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 29073748  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||||| ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  29073749 tgctgatcgaatactagggtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 29073812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 346 - 512
Target Start/End: Original strand, 42120621 - 42120787
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42120621 ggcaggactccaacattcgataaacgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 42120720  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     |||||||||| | || || ||| | |||||||||||||||||| | ||||||| || |||||||||    
T  42120721 ctgatcgaatattggattcctgctgcttagcaagtttgaatttgtcccattcaggggcaagacaatt 42120787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 359 - 512
Target Start/End: Original strand, 16582445 - 16582598
Alignment:
Q  359 catttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatact 458  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  16582445 cattcgataagtgtcttgaacgctagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgttgattgaatact 16582544  T
Q  459 agagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     ||||| ||| ||||||||||| |||||||||| | ||||| ||||||| ||||    
T  16582545 ggagtcatgctggttagcaagtatgaatttgccccgttcagtggtaagataatt 16582598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 39799433 - 39799308
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  39799433 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 39799334  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||||||||||| |||||||    
T  39799333 tgaatttgcctcattcagtggtaaga 39799308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 17425432 - 17425557
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  17425432 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 17425531  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  17425532 tgaatttgccccattcagtggtaaga 17425557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 22002477 - 22002602
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||| |||||||||||| ||||| ||| | ||||||||||    
T  22002477 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatattttcgttcaagatgctgatcgaatactggagtcctgctgcttagcaagtt 22002576  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  22002577 tgaatttgccccattcagtggtaaga 22002602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 41498653 - 41498523
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  41498653 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 41498554  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| ||||||| ||||||| ||||    
T  41498553 tgaatttgccccattcagtggtaagataatt 41498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 8557326 - 8557158
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||| ||| ||||| ||||||| |||| || | |||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||||    
T  8557326 tcggcaggagtccaacattcgataagcatcttgaatgttggtattcaagtgtcaaggaatgcgcctcattcttttgacaattgaataccatcattcaaga 8557227  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | || || ||| | ||||||||||||||||| || ||||||| || |||||||||    
T  8557226 tgttgatcgtatggtggactcctgctgcttagcaagtttgaatttaccccattcaggggcaagacaatt 8557158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 32736731 - 32736861
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  | |||||||||||||||| ||  ||||||||||| | ||||| ||||    
T  32736731 tggtattcaagtgtcaaggaatacacctcattcttttgacacttgaatatcttcattcaagatgttgatcgtatgttagagtcttgctgcttagccagtt 32736830  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||| |||||||  | |||||||||    
T  32736831 tgaatttgccccattcagcagcaagacaatt 32736861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 34521305 - 34521175
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  34521305 tggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctcgagtcctgctgtttagcaagtt 34521206  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| |||||||||  ||||||| ||||    
T  34521205 tgaatttacctcattcaagggtaagataatt 34521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 28476148 - 28476273
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    |||||||||||| ||  ||| | ||||||||||    
T  28476148 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaagatacacatcgaatactagggttctgctgcttagcaagtt 28476247  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||  ||||||| |||||||    
T  28476248 tgaatttgctccattcagtggtaaga 28476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 388 - 512
Target Start/End: Original strand, 35492239 - 35492363
Alignment:
Q  388 tcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||||||  | ||||||||||||||||    
T  35492239 tcaagtgtcaaggattgcacctcattcttttgacacttgaataccatcattcaagatgcttatcggatgctggagtcttgttgtttagcaagtttgaatt 35492338  T
Q  488 tgcctcattcagaggtaagacaatt 512  Q
    |||| ||||||| ||||||| ||||    
T  35492339 tgccccattcagtggtaagataatt 35492363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 344 - 491
Target Start/End: Complemental strand, 10359799 - 10359652
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| ||||||| |||| ||  |||| ||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  10359799 tcggcatgactccaacattcgataagcctcttgaatactggcattgaagtgtcaaggaatgcaccttattcttttgacacttgaataccatcattcaaga 10359700  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    ||||||||| ||  | ||||| | | | ||||||||||||||||||||    
T  10359699 tgttgatcggatgttggagtcctactgtttagcaagtttgaatttgcc 10359652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 344 - 450
Target Start/End: Original strand, 18393956 - 18394062
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||  | |||||||    
T  18393956 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcaccttattcttttgatacttgaataccgtcattcaaga 18394055  T
Q  444 tgttgat 450  Q
    || ||||    
T  18394056 tgctgat 18394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 19471188 - 19471058
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |||| || || ||||| ||  | ||||||||||    
T  19471188 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgatcatcgcatgctggagtcctgttgtttagcaagtt 19471089  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| |  ||||||| ||||||| ||||    
T  19471088 tgaatttactccattcaggggtaagataatt 19471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 23408358 - 23408488
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| | || |||||| | |||| || |||||||| ||| | ||| ||||||    
T  23408358 tggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattgaagatgctcatcgcatgctagagtcctgctgtttaacaagtt 23408457  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||  ||||||| ||||    
T  23408458 tgaattttccccattcatgggtaagataatt 23408488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 11574557 - 11574488
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11574557 tatagtactagatttatctatagaaatagtgaatcccgccctacccgcttgtcgacgaacccaaccaagt 11574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 395 - 512
Target Start/End: Complemental strand, 24108348 - 24108231
Alignment:
Q  395 tcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctca 494  Q
    ||||||||||  ||||||||||||||||||||||||||| | ||||||||| ||||||| |||| ||||| ||| | ||||||||||||||||| || ||    
T  24108348 tcaaggaatgtccctcattcttttgacacttgaataccatcattcaagatgctgatcgagtactggagtcctgctgtttagcaagtttgaatttacccca 24108249  T
Q  495 ttcagaggtaagacaatt 512  Q
    ||||  ||||||| ||||    
T  24108248 ttcaagggtaagataatt 24108231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 359 - 488
Target Start/End: Original strand, 43492074 - 43492203
Alignment:
Q  359 catttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatact 458  Q
    |||| ||||||| |||| ||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| | |||| || ||    
T  43492074 cattcgataagcatcttgaatactggtattgaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagatgctcatcggatgct 43492173  T
Q  459 agagtcttgccggttagcaagtttgaattt 488  Q
     ||||| ||| | ||||||||||| |||||    
T  43492174 ggagtcctgctgtttagcaagtttaaattt 43492203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 2918929 - 2918802
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| ||  | || || ||  | |||||||||||||    
T  2918929 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatggtggaatcatgttgtttagcaagtttga 2918830  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    |||| || ||||||| || |||| ||||    
T  2918829 atttaccccattcaggggcaagataatt 2918802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 512
Target Start/End: Complemental strand, 17538499 - 17538377
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttg 489  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||  |  |||| |||   |||||||||||||||| |    
T  17538499 aagtgtcaaggaatgcatctcattcttttgacacttgaataccatcattcaagatgctgatcgaatgttgaagtcctgctatttagcaagtttgaattcg 17538400  T
Q  490 cctcattcagaggtaagacaatt 512  Q
    |  ||||||  ||||||||||||    
T  17538399 ctccattcaagggtaagacaatt 17538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 40676941 - 40676815
Alignment:
Q  386 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||| || || ||||  ||| | ||||||||||| ||    
T  40676941 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctggagttctgctgtttagcaagtttaaa 40676842  T
Q  486 tttgcctcattcagaggtaagacaatt 512  Q
    |||||| ||||||  ||||||| ||||    
T  40676841 tttgccccattcaagggtaagataatt 40676815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 512
Target Start/End: Original strand, 6977486 - 6977613
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | || || ||| | |||| ||  | ||||| ||  | ||||||||||| |    
T  6977486 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactatcatttaaaatgctcatcgcatgttggagtcctgttgtttagcaagtttaa 6977585  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||| ||| |||||| ||||    
T  6977586 atttgcctcatttagatgtaagataatt 6977613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 20148492 - 20148541
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20148492 gtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 20148541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 43983412 - 43983493
Alignment:
Q  426 gaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||| ||||||||||| | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  43983412 gaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 43983493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 33404373 - 33404420
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33404373 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 33404420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 16253814 - 16253864
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16253814 ggtattgaagtgtcaaggaatgcacctcattcttttgacatttgaatacca 16253864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 29111496 - 29111546
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  29111496 ggtatttaagtgtcaaggaatacacctcattcttttgacacttgaatacca 29111546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 6902340 - 6902389
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  6902340 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttcaatacc 6902389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 669
Target Start/End: Original strand, 10325281 - 10325344
Alignment:
Q  606 tactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaag 669  Q
    |||||||| ||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  10325281 tactagatttatctatagatatagtaaatcccgcccttgccgcttgtcgacgaactcaaccaag 10325344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 667
Target Start/End: Original strand, 8276568 - 8276630
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaacca 667  Q
    ||||||| | |||||||||||||||||||||| |||||| ||||||||| ||||| |||||||    
T  8276568 gtactaggtttatctgtagaaatagtaaatccagccctagccgcttgtcaacgaatccaacca 8276630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 10364481 - 10364431
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  10364481 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 10364431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 512
Target Start/End: Original strand, 24936434 - 24936540
Alignment:
Q  406 acctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaa 505  Q
    ||||||||||||||||||||||||||||   ||||||||| ||| || ||  | | ||| ||| | |||||||||||||||||||| ||||||  |||||    
T  24936434 acctcattcttttgacacttgaataccattattcaagatgctgaacgtatgttggcgtcctgctgcttagcaagtttgaatttgccccattcactggtaa 24936533  T
Q  506 gacaatt 512  Q
    || ||||    
T  24936534 gataatt 24936540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 35491997 - 35492047
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  35491997 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 35492047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 40677219 - 40677169
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  40677219 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 40677169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 6977198 - 6977247
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  6977198 ggtattgaagtgtcaatgaatgaacctcattcttttgacacttgaatacc 6977247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 605 - 670
Target Start/End: Complemental strand, 35001169 - 35001104
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    |||||| || ||||| ||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  35001169 gtactatatttatctatagaaatagtaaatccgtccctttccgcttgtcgacgaacccaaccaagt 35001104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 17425448 - 17425355
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  17425448 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 17425355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 22002493 - 22002400
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||| | ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  22002493 ttgacacttgaataccattgttcaagatgctcatcgaatactggagtcctgcagattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 22002400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 39799417 - 39799510
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  39799417 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 39799510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 416
Target Start/End: Complemental strand, 10364196 - 10364162
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattctt 416  Q
    |||||||||||||||||||||||||||||||||||    
T  10364196 tggtattcaagtgtcaaggaatgcacctcattctt 10364162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 10364180 - 10364250
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||||| ||||| ||||| ||||||| || || || ||||| ||| ||||||||||||    
T  10364180 ttgacacttgaataccaacattcaaaatgttcatcgaatgctggattcctgccgtttaacaagtttgaatt 10364250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 19471478 - 19471428
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| |||||||||||||| || ||||||||||    
T  19471478 ggtattgaagtgtcaaggaatggacctcattcttttgccatttgaatacca 19471428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 43491812 - 43491862
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  43491812 ggtattgaagtgtcaaggaatggacctcattcttttcacatttgaatacca 43491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 2919209 - 2919160
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||||||    
T  2919209 ggtattgaagtgtcaatgaatggacctcattcttttgacgcttgaatacc 2919160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 5420801 - 5420708
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| |||||||||||| ||| |||||||  | ||||| ||||  ||| |||||||||| ||||| ||| |||| |||||||||||    
T  5420801 ttgacacttgaatatcaacgttcaagacgtttatcgaatgttggagtcctgcctattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 5420708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 8557272 - 8557365
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||| ||||||||| | |||||||  | || || ||||| ||| |||||||| ||||||| ||| |||| |||||||||||    
T  8557272 ttgacacttgaataccaacattcaagatgcttatcgaatgttggactcctgccgattaacaagtttg-atttgccccatccaga-gtaagacaatt 8557365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 512
Target Start/End: Original strand, 25685097 - 25685196
Alignment:
Q  413 tcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||||   ||||||||| ||| || ||  | | ||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  25685097 tcttttgacacttgaataccattattcaagatgctgaacgtatgttggcgtcctgctgcttagcaagtttgaatttgccccattcactggtaagataatt 25685196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 29073703 - 29073610
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||| | | ||| ||| || ||||||||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  29073703 ttgacacttgaataccagtgttcaagaggcttatcaaatgctggagtcttgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 29073610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 42120673 - 42120580
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||||||||||| ||| |||||||  | ||||| ||||  |||  ||||||||| ||||| ||| |||| |||||||||||    
T  42120673 ttgacacttgaataccaacgttcaagacgtttatcgaatgttggagtcctgccaattaataagtttgaa-ttgccccatccaga-gtaagacaatt 42120580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 27130353 - 27130304
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||  ||||||||||||| |||||||||||||    
T  27130353 ggtattgaagtgtcaatgaatagacctcattcttttaacacttgaatacc 27130304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 37312339 - 37312290
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||   |||| |||||||||||||||||||||||||||    
T  37312339 ggtattgaagtgtcagtaaatggacctcattcttttgacacttgaatacc 37312290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 3936628 - 3936680
Alignment:
Q  435 cgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||| | |||||||||| ||||| ||||| ||| ||||||||||||    
T  3936628 cgttcaagatgctcatcgaatactggagtcctgccgattaacaagtttgaatt 3936680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 33404505 - 33404545
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  33404505 ttagcaagtttgaatttacccaattcagaggtaagacaatt 33404545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 512
Target Start/End: Original strand, 35492104 - 35492168
Alignment:
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| | ||||| ||| | || |||||||||||||| || |||||| |||||||||||||    
T  35492104 gatcgaatatttgagtcctgctgcttggcaagtttgaatttaccacattcaaaggtaagacaatt 35492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 2394 - 2557
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| ||||||||  |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  2394 tcggtaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 2493  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  2494 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 2448 - 2355
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| | ||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  2448 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctaccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 2355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 34141469 - 34141632
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| ||||||||  |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  34141469 tcggtaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 34141568  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  34141569 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 34141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 17183820 - 17183988
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |    
T  17183820 tcggcaggactccagcattcgataatcttcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttcacacttgaataccagcgttcaaaa 17183919  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  17183920 tgatgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcaaaggcaagacaatt 17183988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 45362856 - 45362693
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||| ||||  |||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45362856 tcggcaggtctccagcattcgataagcgtatggaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgctcaaga 45362757  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |  |||||||||| | ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  45362756 tactgatcgaatattggagtcttgctggttagcaagtttgaatttgcctcattcagtggtaaga 45362693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 28978806 - 28978637
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  28978806 tcggcaggactccaacattcgataagcgtcttgcacgctggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaataccaccgttcaaga 28978707  T
Q  444 tgttgatcgaa-tactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||| |||||||||| ||  ||||||||| |||||||||||| ||||||  ||||||| ||||    
T  28978706 tgctgatcgaattactagagtcctgttggttagcaaatttgaatttgccccattcaatggtaagataatt 28978637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 30361120 - 30361288
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| | |||| |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30361120 tcggtaggactccaatatttaataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 30361219  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||||||| | |||||||||||||||||||| ||||||| || |||||||||    
T  30361220 tgttgatcgtatgttggagtcttgctgtttagcaagtttgaatttgccccattcaggggcaagacaatt 30361288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 13920909 - 13921072
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13920909 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13921008  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |  |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  13921009 ttctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccacattcagtggtaaga 13921072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 9366685 - 9366560
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  9366685 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgctcatcgaatactggagtcctgctgcttagcaagtt 9366586  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  9366585 tgaatttgccccattcagtggtaaga 9366560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 10523672 - 10523835
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| ||||||||  |||| |||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  10523672 tcggtaggactccagcattcgataagcgtcttgaacacttgtattcaagtgtcaagtaatgcacctcattcttttgacacttgaataccagcgttcaaga 10523771  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||| | || |||| |||||||||||| ||||||| |||||||    
T  10523772 tgctgatcgaatactggtgtcctgctgcttggcaattttgaatttgccacattcagtggtaaga 10523835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 17839913 - 17840076
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| ||| | | |||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  17839913 tcggcaggactccagcattcgatgaacatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgaaacttgaataccagcgttcaaga 17840012  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  17840013 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 17840076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 39476844 - 39476676
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||| ||||||| |||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||    
T  39476844 tcggtaggactccaacattcgataagcatcttgaatgttggtattcaagtgtcaaggaatgtacctcattcttttgacacttgaataccatcatttaaga 39476745  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||| ||||||| || |||||||||    
T  39476744 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgccccattcaggggcaagacaatt 39476676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 41218217 - 41218385
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||| ||||| ||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  41218217 tcggcatgactccaacattcgataagcatcttgaatgctggtattcaagtgtcaagaaatgcacctcattcttttgacacttgaataccatcattcaaga 41218316  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||| ||  | ||||| ||| | ||||||||||||||||| || ||||||| ||||||| ||||    
T  41218317 tgatgatcgtatgttggagtcctgctgcttagcaagtttgaattttccccattcagtggtaagataatt 41218385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 344 - 491
Target Start/End: Complemental strand, 20378634 - 20378487
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  20378634 tcggcaggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatccttcaaga 20378535  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    || |||||| ||  | ||||  ||| | ||||||||||||||||||||    
T  20378534 tgctgatcgtatgttggagttctgctgcttagcaagtttgaatttgcc 20378487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 347 - 491
Target Start/End: Original strand, 34157410 - 34157554
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    |||||||||| ||||| ||| ||| |||| |||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||     
T  34157410 gcaggactccaacattcgatgagcatcttgaacaatggtattcaagtgttaaggaatgcaccttattcttttgacacttgaataccagcgttcaagatgc 34157509  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    |||||||||||| | ||| ||| | ||||||||||||||||||||    
T  34157510 tgatcgaatactggtgtcctgctgcttagcaagtttgaatttgcc 34157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 385 - 512
Target Start/End: Original strand, 42683058 - 42683185
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||  | |||||||||||||    
T  42683058 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgctgatagaatactggagtcctgttgtttagcaagtttga 42683157  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    ||||||| |||| || ||||||| ||||    
T  42683158 atttgccccatttagtggtaagataatt 42683185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 20565400 - 20565525
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||| | || |||||||    
T  20565400 tggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaagatgctgatcgaatgctggtgtcctgctgcttggcaagtt 20565499  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  20565500 tgaatttgccccattcagtggtaaga 20565525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 48271293 - 48271423
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||  | ||  | ||| | ||||||||||    
T  48271293 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctgatcggatgttggacccctgctgtttagcaagtt 48271392  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| ||||||| ||||    
T  48271393 tgaatttgcctcattcagtggtaagataatt 48271423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 383 - 512
Target Start/End: Complemental strand, 20877613 - 20877484
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 482  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||  | ||||| ||| | |||||||||||    
T  20877613 ggtattcaaatgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctgatcgtatgttggagtcctgctgtttagcaagttt 20877514  T
Q  483 gaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| ||||||| |||||||||| ||||    
T  20877513 gaatttacctcatttagaggtaagataatt 20877484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 48220347 - 48220258
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48220347 tcggcaagactccaacatttgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 48220258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 21186898 - 21186731
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||| ||| ||| |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  21186898 cggcaggaatccagcattcgatgagcctcttgaatgctggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaataccatcattcaagat 21186799  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | |||||| ||  | ||||| ||| | |||||||||||||||||| | ||||||  ||||||| ||||    
T  21186798 gctgatcggatgttggagtcctgctgcttagcaagtttgaatttgtcccattcattggtaagataatt 21186731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 30354377 - 30354247
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| | |||||||    ||||| | | | ||||||||||    
T  30354377 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgctcatcgaatgtcggagtcctcctgtttagcaagtt 30354278  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| ||||||| ||||    
T  30354277 tgaatttgcctcattcagtggtaagaaaatt 30354247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 347 - 512
Target Start/End: Original strand, 18238172 - 18238337
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    |||||||||| |||||  |||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||     
T  18238172 gcaggactccaacattcaataagcctcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcattattcaagatgc 18238271  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||| || ||  | ||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  18238272 tgaacgtatgttggagtcctgctgcttagcaagtttgaatttgccccattcaatggtaagataatt 18238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 349 - 452
Target Start/End: Complemental strand, 26601376 - 26601273
Alignment:
Q  349 aggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 448  Q
    |||||||| ||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  26601376 aggactccaacattcgataagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgatg 26601277  T
Q  449 atcg 452  Q
    ||||    
T  26601276 atcg 26601273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 358 - 512
Target Start/End: Complemental strand, 28113979 - 28113826
Alignment:
Q  358 acatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatac 457  Q
    ||||||||||||| |||| ||   |||||||||||||||||  |||||||||||||||||||||||||||||||| |  |||||||||||||||| ||      
T  28113979 acatttgataagcatcttgaataatggtattcaagtgtcaaataatgcacctcattcttttgacacttgaatacc-attttcaagatgttgatcggatgt 28113881  T
Q  458 tagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | ||||| ||| | ||||||||||||||||| || |||| |||||||||| ||||    
T  28113880 tggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaagataatt 28113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 507
Target Start/End: Original strand, 40589154 - 40589303
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    |||||||||||  |||| |||||||||||| ||||||||||||||||||||           | ||||| || ||||||||||||||| |||||||||||    
T  40589154 ggcaggactccagcattcgataagcgtcttgaacgctggtattcaagtgtc-----------cgcattcctt-gacacttgaataccaccgttcaagatg 40589241  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
     |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||    
T  40589242 ctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaaga 40589303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 41622741 - 41622829
Alignment:
Q  400 gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaattt 488  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||| || || ||||||||| | |||||||||||||||||    
T  41622741 gaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcggatgctggagtcttgctgtttagcaagtttgaattt 41622829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 10224712 - 10224836
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||  || || ||||||||| | ||||||||||    
T  10224712 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaa-atgatcatcacatgctggagtcttgctgtttagcaagtt 10224810  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    ||||||| || |||| || |||||||    
T  10224811 tgaatttaccccattaaggggtaaga 10224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 36393424 - 36393280
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||| | ||| ||||| ||||||| |||| ||  |||| ||| ||||||| |||||||||||| ||||||||||||||||||||||| | | ||||||    
T  36393424 cggcagaaatccaacattcgataagcatcttgaatactggcattgaagtgtccaggaatgcaccttattcttttgacacttgaataccatcatgcaagat 36393325  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttg 489  Q
    |||||||| ||  | ||||| ||| | ||||||||||||||||||    
T  36393324 gttgatcggatggtggagtcctgctgtttagcaagtttgaatttg 36393280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 512
Target Start/End: Original strand, 42735622 - 42735751
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 482  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | || ||||||||    
T  42735622 ggtattgaagtgtcaaagaatggacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcatgctgttttgcaagttt 42735721  T
Q  483 gaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| || ||||||  ||||||| ||||    
T  42735722 gaatttaccccattcaagggtaagataatt 42735751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 512
Target Start/End: Complemental strand, 46861755 - 46861631
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 483  Q
    |||||||||||||||||||    |||||||||||||||| ||||||| || | |||||||||||||| | ||  | ||||||||| | ||||||||||||    
T  46861755 gtattcaagtgtcaaggaa----cctcattcttttgacatttgaatatcaccattcaagatgttgattggatgttggagtcttgctgcttagcaagtttg 46861660  T
Q  484 aatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||  |||||| ||||||| ||||    
T  46861659 aatttgcccaattcagtggtaagataatt 46861631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 34353271 - 34353401
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| | || || |||||||||| ||  | ||||| ||| | ||||||||||    
T  34353271 tggtattcaagtgtcaagaaatgcatcttattcttttgacatttgaataccatcatttaaaatgttgatcgtatgttggagtcctgctgtttagcaagtt 34353370  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || |||||| | |||||| ||||    
T  34353371 tgaatttaccccattcaaatgtaagataatt 34353401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 21614632 - 21614582
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21614632 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 21614582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 1642438 - 1642389
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  1642438 gtattgaagtgtcaaggaatgcacctcattcttttgacactcgaatacca 1642389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 15337745 - 15337702
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15337745 aagtgtcaaggaatgtacctcattcttttgacacttgaatacca 15337702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 17839967 - 17839874
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||||| ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  17839967 ttgacacttgaataccattgttcaagatgttcatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 17839874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 21614307 - 21614260
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  21614307 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaata 21614260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 9366669 - 9366739
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||||||||| ||| ||||||||||||    
T  9366669 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcttgccgattaacaagtttgaatt 9366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 20877899 - 20877849
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  20877899 ggtattgaagtgtcaaggaatgcacctcatttttttgacacttcaatacca 20877849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 36393672 - 36393622
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  36393672 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 36393622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 21187145 - 21187096
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  21187145 gtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 21187096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 13920963 - 13920870
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  13920963 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 13920870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 17183874 - 17183781
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  17183874 ttgacacttgaataccagcgttcaagaagattatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 17183781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 20378580 - 20378673
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||||| | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||||| |||||||||    
T  20378580 ttgacacttgaataccatcgttcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccagagg-aagacaatt 20378673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 34141523 - 34141430
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| | ||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  34141523 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctaccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 34141430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 498
Target Start/End: Complemental strand, 43350947 - 43350832
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 482  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||| || | ||||||||| | |||| || || ||||| |||   ||| ||| |||    
T  43350947 ggtattgaagtgtcaaagaatggacctcattcttttgacatttgaatatcatcattcaagatgcttatcgtattctggagtcctgctttttatcaatttt 43350848  T
Q  483 gaatttgcctcattca 498  Q
    |||||| || ||||||    
T  43350847 gaattttccccattca 43350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 21650883 - 21650933
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| || |||||| ||||| ||||||||||||||||||||||||||||    
T  21650883 ggtattgaactgtcaaagaatgtacctcattcttttgacacttgaatacca 21650933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 610 - 668
Target Start/End: Original strand, 23561756 - 23561814
Alignment:
Q  610 agatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaa 668  Q
    |||| ||||| |||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  23561756 agatatatctatagatatagtaaatccagcccttgccgcttgtcgacgaacccaaccaa 23561814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 46862041 - 46861991
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  46862041 ggtattgaagtgtcaagaaatggacctcattcttttgacatttgaatacca 46861991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 48271008 - 48271058
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| || |||||||||||||| ||||||||||    
T  48271008 ggtattgaagtgtcaaggaatggacatcattcttttgacatttgaatacca 48271058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 30354662 - 30354613
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  30354662 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 30354613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 668
Target Start/End: Original strand, 12169990 - 12170049
Alignment:
Q  609 tagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaa 668  Q
    ||||| ||||| ||||||||||||||||  ||||  |||||||||||||| |||||||||    
T  12169990 tagatttatctatagaaatagtaaatccgacccttgccgcttgtcgacgaccccaaccaa 12170049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 20565416 - 20565323
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||   ||||||||| | |||||||||| ||||| ||| | || ||||||||||| ||||| ||| ||| ||||||||||||    
T  20565416 ttgacacttgaataccattattcaagatgctcatcgaatactggagtcctgcagattggcaagtttgaa-ttgccccatccag-ggtaagacaatt 20565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 28114239 - 28114192
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  28114239 gtattgaagtgtcaatgaattgacctcattcttttgacacttgaatac 28114192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 39476790 - 39476883
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||| ||||||||| | |||||||  | ||||| | ||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  39476790 ttgacacttgaataccaacattcaagatgcttatcgaatgttggagtcctaccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 39476883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 48315027 - 48314988
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgaca 422  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  48315027 ggtattgaagtgtcaaggaatgaacctcattcttttgaca 48314988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 501
Target Start/End: Complemental strand, 40589204 - 40589123
Alignment:
Q  419 gacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 501  Q
    ||||||||||||||| ||||||||| | | ||||||| || ||||| ||||  ||| |||||||||| ||||||||| |||||    
T  40589204 gacacttgaataccagcgttcaagacgcttatcgaatgctggagtcctgccaattaacaagtttgaa-ttgcctcatccagag 40589123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 512
Target Start/End: Original strand, 48271118 - 48271180
Alignment:
Q  450 tcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||||||| ||| | || |||||||||||||| || |||||| |||||||||||||    
T  48271118 tcgaatattagagtcatgctgcttggcaagtttgaatttaccccattcaaaggtaagacaatt 48271180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 15337617 - 15337580
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  15337617 gcaagtttaaatttacctcattcagaggtaagacaatt 15337580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 26500378 - 26500418
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||||||||| || || |||||||||    
T  26500378 ttagcaagtttgaatttgcctcatttaggggcaagacaatt 26500418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 26592335 - 26592295
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||||||||| || || |||||||||    
T  26592335 ttagcaagtttgaatttgcctcatttaggggcaagacaatt 26592295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 4889 - 5057
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||  | |||||||||    
T  4889 tcggcaggactccaacattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatacgcctcattcttttgacactcgaatatgagcgttcaaga 4988  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||||||||| ||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||    
T  4989 tgctgatcgaatactggagtcttgctgcttagcaagtttgaatttgccccattcagtggtaagataatt 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 499
Target Start/End: Complemental strand, 11366 - 11211
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  11366 tcggcaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactagcgttcaaga 11267  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 499  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| |||||||    
T  11266 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcag 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 11312 - 11405
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| || ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  11312 ttgacacttgaatatcagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 11405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 511
Target Start/End: Complemental strand, 13617504 - 13617337
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    ||||||||||||   |||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13617504 tcggcaggactcaagcattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcactccattcttttgacacttgaataccaacgttcaaga 13617405  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaat 511  Q
    || |||| ||||| | ||||| ||| | |||||||||||||||||||| |||||| ||| ||||||||    
T  13617404 tgctgatagaatattggagtcatgctgcttagcaagtttgaatttgccccattcaaaggcaagacaat 13617337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 6206127 - 6206252
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  6206127 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 6206226  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  6206227 tgaatttgccccattcagtggtaaga 6206252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 11693094 - 11693219
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  11693094 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 11693193  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  11693194 tgaatttgccccattcagtggtaaga 11693219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 347 - 507
Target Start/End: Original strand, 2192999 - 2193159
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    ||||||| || | ||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||      
T  2192999 gcaggaccccaatattcgatcagcatcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccactgttcaagatcc 2193098  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||||||| ||||| ||| | || ||||||||||||||||| |||| || |||||||    
T  2193099 tgatcgaatactggagtcctgctgcttggcaagtttgaatttgccccatttagtggtaaga 2193159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 507
Target Start/End: Original strand, 29067144 - 29067265
Alignment:
Q  386 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||||||||    
T  29067144 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgcagatcgaatactggagtcctgctggttagcaagtttgaa 29067243  T
Q  486 tttgcctcattcagaggtaaga 507  Q
    |||| | |||| || |||||||    
T  29067244 tttgtcccatttagtggtaaga 29067265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 507
Target Start/End: Original strand, 29108731 - 29108852
Alignment:
Q  386 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||||||||    
T  29108731 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgcagatcgaatactggagtcctgctggttagcaagtttgaa 29108830  T
Q  486 tttgcctcattcagaggtaaga 507  Q
    |||| | |||| || |||||||    
T  29108831 tttgtcccatttagtggtaaga 29108852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 347 - 491
Target Start/End: Complemental strand, 24020698 - 24020554
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    ||||||| || | ||| ||| ||| |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  24020698 gcaggaccccaatattcgatcagcatcttgaacgttgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaccgttcaagatcc 24020599  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 491  Q
    |||||||||||| ||||| ||| | ||||||||||||||||||||    
T  24020598 tgatcgaatactggagtcctgctgcttagcaagtttgaatttgcc 24020554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 27640819 - 27640944
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| | |||||| ||| ||||| ||| | ||||||||||    
T  27640819 tggtattcaagtgtcaagaaatgcacctcattcttttcacacttgaataccatcgttcaagatgctaatcgaacactggagtcctgctgcttagcaagtt 27640918  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  27640919 tgaatttgccccattcagtggtaaga 27640944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 35058338 - 35058170
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||| |||||  ||||| ||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  35058338 tcggcaagactctaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacatcattcttttgacacttgaataccatcattcaaga 35058239  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||| ||  | ||||| ||| | |||||||||||||||||| | ||||||| || |||| ||||    
T  35058238 tgctgatcgtatgttggagtcgtgctgcttagcaagtttgaatttgtcccattcaggggcaagaaaatt 35058170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 368 - 512
Target Start/End: Original strand, 13403448 - 13403592
Alignment:
Q  368 agcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttg 467  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||  | ||||| |     
T  13403448 agcgtcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctgatcggatgttggagtccta 13403547  T
Q  468 ccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | ||||||| |||||||||||| ||||||| ||||||| ||||    
T  13403548 ctgcttagcaaatttgaatttgccccattcagtggtaagataatt 13403592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 385 - 512
Target Start/End: Original strand, 12397426 - 12397553
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||  |  |||| ||| | |||||||||||||    
T  12397426 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttcataggatgttgtagtcctgctgtttagcaagtttga 12397525  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    ||||||| ||||||| ||||||| ||||    
T  12397526 atttgccccattcagcggtaagataatt 12397553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 32027190 - 32027060
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||  | |||| ||||| ||||| ||  | ||||||||||    
T  32027190 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaattatcatcgcatactggagtcctgttgtttagcaagtt 32027091  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  32027090 tgaatttaccacattcaggggtaagataatt 32027060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 32037249 - 32037119
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||  | |||| ||||| ||||| ||  | ||||||||||    
T  32037249 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaattatcatcgcatactggagtcctgttgtttagcaagtt 32037150  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  32037149 tgaatttaccacattcaggggtaagataatt 32037119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 35020799 - 35020669
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||  ||||| | |||| || |  ||||| ||| | ||||||||||    
T  35020799 tggtattcaagcgtcaaggaatgcacctcattcttttaacacttgaataccatcgttgcagatgctcatcggatgccggagtcctgctgtttagcaagtt 35020700  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  35020699 tgaattttccccattcagtggtaagataatt 35020669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 603 - 670
Target Start/End: Original strand, 31519737 - 31519804
Alignment:
Q  603 tagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31519737 tagtactagatttatctatagaactagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 31519804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 455
Target Start/End: Original strand, 7821232 - 7821305
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaat 455  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||| ||||||||    
T  7821232 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgtcgatcgaat 7821305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 29483632 - 29483556
Alignment:
Q  258 aaaatcatcaattcatcaattaattataagctagaacaagatgaaaagtgattatgagaataagtatccaaccccctt 335  Q
    ||||||||||||||| ||||| || |||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  29483632 aaaatcatcaattcaacaattgatcataagctagaacaaaa-gaaaagtgattatgagaataactatccaaccccctt 29483556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 512
Target Start/End: Complemental strand, 34802743 - 34802614
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 482  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||   || || ||| | |||| || || || || ||| | |||||||||||    
T  34802743 ggtattgaagtgtcaaagaatgcacctcattcatttgacacttgaataccattatttaaaatgatcatcgcatgctggaatcctgctgtttagcaagttt 34802644  T
Q  483 gaatttgcctcattcagaggtaagacaatt 512  Q
     ||||| |||||||||| ||||||| ||||    
T  34802643 aaatttacctcattcaggggtaagataatt 34802614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 801526 - 801575
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  801526 ggtattgaagtgtcgaggaatgcacctcattcttttgacacttgaatacc 801575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 4495266 - 4495315
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  4495266 ggtattgaagtgtcaaggaatgaacctcattcttttgacacttgaatacc 4495315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 2193050 - 2192957
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| ||||||||||| |||||||||| | | ||| ||| | |||||||||||||| ||||| ||| |||| |||||||||||    
T  2193050 ttgacacttgaataccagcgttcaagatgctgatcgaatattggggtcctgctgattagcaagtttgaa-ttgccccatccaga-gtaagacaatt 2192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 14122963 - 14123013
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  14122963 ggtattgaagtgtcaaggaatggaccttattcttttgacacttgaatacca 14123013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 15684720 - 15684638
Alignment:
Q  258 aaaatcatcaattcatcaatt-aattataagctagaacaagatgaaaagtgattatgagaataagtatccaacccccttacct 339  Q
    ||||||||||||||| ||||| ||   ||||||||| ||| | ||||| || |||||||||||||||||||||||||||||||    
T  15684720 aaaatcatcaattcaacaatttaaacgtaagctagatcaaaaagaaaattgtttatgagaataagtatccaacccccttacct 15684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 425
Target Start/End: Original strand, 23911112 - 23911154
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacactt 425  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  23911112 ggtattgaagtgtcaaggaatgcacctcattcttttgacactt 23911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 24020647 - 24020717
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||| |||||||||||||| |||||||||| | | ||| ||| | ||||||||||||||||    
T  24020647 ttgacacttgaatatcaacgttcaagatgctgatcgaatattggggtcctgctgattagcaagtttgaatt 24020717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 417 - 501
Target Start/End: Original strand, 35058284 - 35058367
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 501  Q
    ||||||||||||||||| | ||||||||| | |||||||  |||||||||||||  || |||||||||| ||||||||| |||||    
T  35058284 ttgacacttgaataccagcattcaagatgcttatcgaatgttagagtcttgccgagtaacaagtttgaa-ttgcctcatccagag 35058367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 6206143 - 6206050
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  6206143 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 6206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 13402895 - 13402945
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| |||||||| |||||||| ||||||||||    
T  13402895 ggtattgaagtgtcaaggaatggacctcattattttgacatttgaatacca 13402945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 4495593 - 4495658
Alignment:
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||| || || ||||| ||| | ||||||||||||||||| || ||||||||||||||||||||    
T  4495593 tgatcgcatgctggagtcatgctgtttagcaagtttgaatttaccccattcagaggtaagacaatt 4495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 30257426 - 30257377
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||||    
T  30257426 ggtattgaagtgtcaatgaatgaacctcatttttttgacacttgaatacc 30257377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 32027475 - 32027426
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  32027475 ggtattgaagtgccaatgaatgaacctcattcttttgacacttgaatacc 32027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 32037534 - 32037485
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  32037534 ggtattgaagtgccaatgaatgaacctcattcttttgacacttgaatacc 32037485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 13617450 - 13617517
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||    
T  13617450 ttgacacttgaataccagcgttcaagacgcttatcgaatgcttgagtcctgccgattaacaagtttga 13617517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 11693110 - 11693040
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||||||  || ||||||| | || ||||||| ||||| ||||| ||| ||||||||||||    
T  11693110 ttgacacttgaataccattgtccaagatgctcattgaatactggagtcctgccgattaacaagtttgaatt 11693040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 12397138 - 12397187
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| || |||||||||||||| |||||||||    
T  12397138 ggtattgaagtgtcaacgaatggacatcattcttttgacatttgaatacc 12397187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 621 - 670
Target Start/End: Original strand, 13543073 - 13543122
Alignment:
Q  621 tagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    |||||||||||||||| |||||  | ||||||||||||||| ||||||||    
T  13543073 tagaaatagtaaatccggcccttgctgcttgtcgacgaaccgaaccaagt 13543122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 27640835 - 27640745
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||   ||||||||| | |||||||||||||||| ||||   || |||||||||| ||||| ||| |||| |||||||||||    
T  27640835 ttgacacttgaataccattattcaagatgctcatcgaatactagagtcctgcc---taacaagtttgaa-ttgccccatccaga-gtaagacaatt 27640745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 35021084 - 35021035
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| ||||| ||||||||||| |||||||||    
T  35021084 ggtattgaagtgtcaacgaatggacctctttcttttgacatttgaatacc 35021035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 14123418 - 14123457
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  14123418 ttagcaagtttgaatttgcc-cattcagaggcaagacaatt 14123457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 8575748 - 8575585
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8575748 tcggcaggactccagtattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 8575649  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||||||||||| |||||||    
T  8575648 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgcctcattcagtggtaaga 8575585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 38854757 - 38854920
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38854757 tcggcaggactccagtattcgataagcctctcgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 38854856  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  38854857 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 38854920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 27660946 - 27660821
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||||||||    
T  27660946 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgctgatcgaatactggagtcctgctgcttagcaagtt 27660847  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  27660846 tgaatttgccccattcagtggtaaga 27660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 346 - 512
Target Start/End: Original strand, 40012220 - 40012386
Alignment:
Q  346 ggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||| ||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  40012220 ggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaagatg 40012319  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||| | ||||| | | | ||||||||||||||||||||  ||| || || |||||||||    
T  40012320 ttgatcgaatattggagtcctactgcttagcaagtttgaatttgcccaatttaggggcaagacaatt 40012386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 348 - 512
Target Start/End: Original strand, 3459396 - 3459560
Alignment:
Q  348 caggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 447  Q
    ||||||||| ||||| ||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  3459396 caggactccaacattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacttcattcttttgacacttgaataccatcattcaagatgtt 3459495  T
Q  448 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||| ||| | ||||| ||| | |||||||  ||||||||||| ||||||| ||||||| ||||    
T  3459496 gatcgtatattggagtcctgctgcttagcaaaattgaatttgccccattcagtggtaagataatt 3459560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 347 - 507
Target Start/End: Original strand, 22284173 - 22284333
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    ||||||| || | ||| ||| ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  22284173 gcaggaccccaatattcgatcagcatcttgaacgccagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaccgttcaagatcc 22284272  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||||||    
T  22284273 tgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaaga 22284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 344 - 507
Target Start/End: Complemental strand, 6836 - 6673
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||  |||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  6836 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaaa 6737  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| | ||| ||| | ||| ||||||||||||||||  |||||| |||||||    
T  6736 tgttgatcgaatactggggtcctgctgcttaacaagtttgaatttgccctattcagtggtaaga 6673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 512
Target Start/End: Original strand, 19400970 - 19401133
Alignment:
Q  349 aggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 448  Q
    |||||||| ||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  19400970 aggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaatatgttg 19401069  T
Q  449 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||| ||  | ||| | ||| | |||||||||| ||||||||| |||||||||| |||||||||    
T  19401070 atcgtatgttggagccatgctgcttagcaagttagaatttgccccattcagaggcaagacaatt 19401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 11028088 - 11028213
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  11028088 tggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 11028187  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  11028188 tgaatttgccccattcagtggtaaga 11028213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 30710197 - 30710360
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30710197 tcggcaggactccagtattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaaga 30710296  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || | |||||||||| | ||| ||| | || ||||||||||||||||| ||||||| |||||||    
T  30710297 tgctaatcgaatactggtgtcatgctgcttggcaagtttgaatttgccccattcagtggtaaga 30710360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 19036243 - 19036118
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||| | || |||||||    
T  19036243 tggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaagatgctgatcgaatgctggtgtcctgctgcttggcaagtt 19036144  T
Q  482 tgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| ||||||| |||||||    
T  19036143 tgaatttgccccattcagtggtaaga 19036118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 344 - 507
Target Start/End: Original strand, 28881590 - 28881753
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||||||||||||   ||| ||| ||| |||| |||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  28881590 tcggcaggactccagtattcgatgagcatcttgaacaatggtattgaagtgtcaaggaatgcacctcattctgttgacacttgaataccaaggtttaaga 28881689  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    || | |||||||||| | ||| ||| | || ||||||||||||||||| ||||||| |||||||    
T  28881690 tgctaatcgaatactggtgtcctgctgcttggcaagtttgaatttgccccattcagtggtaaga 28881753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 1399870 - 1399740
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||| | |||| || |||||||| ||| | ||||||||||    
T  1399870 tggtattcaagtgtcaaggaatgcaccacattcttttgacacttgaatatcatcattcaagatgctcatcgcatgctagagtcctgctgtttagcaagtt 1399771  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || ||||||| ||||||| ||||    
T  1399770 tgaatttaccccattcaggggtaagataatt 1399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 344 - 512
Target Start/End: Original strand, 1971967 - 1972134
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 443  Q
    |||| |||||||| ||||| ||||||| |||| ||   ||||||| ||||||||||||||||||||||||||||||||| || ||||||| | |||||||    
T  1971967 tcgggaggactccaacattcgataagcctcttgaatattggtattgaagtgtcaaggaatgcacctcattcttttgacagttaaataccatcattcaaga 1972066  T
Q  444 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    || |||||| ||  | ||||| ||| | |||||||||||||||||||| ||| |||| |||||||||||    
T  1972067 tgctgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccatccaga-gtaagacaatt 1972134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 6793078 - 6792911
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| |||  |||| ||||||| |||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  6793078 cggcaggaatccagcattcgataagcatcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 6792979  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | |||||| ||  | ||||| ||  | ||||||| |||||||||||| ||||||  ||||||| ||||    
T  6792978 gctgatcggatgttggagtcatgttgtttagcaaatttgaatttgccccattcaagggtaagataatt 6792911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 7082877 - 7083044
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    ||||||||||||  |||| ||| ||| |||| || | |||||||||||||||||||||||||||||||||||| ||||||||||||||  | || || ||    
T  7082877 cggcaggactccagcattcgatgagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattctttagacacttgaataccgtcatttaaaat 7082976  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | |||||||| | ||||| ||| | |||||||||||||||||||| ||||||  ||||||| ||||    
T  7082977 gctcatcgaatattggagtcctgcagtttagcaagtttgaatttgccccattcaagggtaagataatt 7083044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 35565876 - 35566043
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| ||||||| | || || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||    
T  35565876 cggcaggaatccaacattcgataagcattttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaat 35565975  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | |||  ||  | ||||| ||| | ||||||||||||||||| || ||||||||||||||| ||||    
T  35565976 gctcatcacatgttggagtcgtgctgtttagcaagtttgaatttaccccattcagaggtaagataatt 35566043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 1695432 - 1695562
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||| ||| | ||||||||||    
T  1695432 tggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgatggagtcctgctgtttagcaagtt 1695531  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||| || |||| |||||||||| ||||    
T  1695532 tgaatttaccccatttagaggtaagaaaatt 1695562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 18308901 - 18309031
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||| |||||| ||  | ||||| | |   ||||||||||    
T  18308901 tggtattcaagtgtcaaggaatgcatctcattcttttgacacttgaataccataattcaagatgctgatcggatgttggagtcctactacttagcaagtt 18309000  T
Q  482 tgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||| ||||||| ||||    
T  18309001 tgaatttgcctcattcagtggtaagataatt 18309031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 384 - 512
Target Start/End: Original strand, 11347351 - 11347479
Alignment:
Q  384 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 483  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||| | |||| ||  | ||||  ||| | ||||||||||||    
T  11347351 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcatatgctcatcggatgttggagttctgctgtttagcaagtttg 11347450  T
Q  484 aatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||| ||||||| ||||    
T  11347451 aatttgcctcattcagtggtaagataatt 11347479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 25498687 - 25498854
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||||| ||| ||||| ||| ||| |||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| | || || ||    
T  25498687 cggcaggaatccaacattcgatgagcatcttgaatgatggtattgaagtgtcaaggaatgcacctcattcttttgacatttgaataccatcatttaaaat 25498786  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | |||| || || ||||| ||| | ||||||||||||||||| || ||||||| ||||||| ||||    
T  25498787 gctcatcggatgctggagtcctgctgtttagcaagtttgaatttaccccattcaggggtaagataatt 25498854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 5505671 - 5505602
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5505671 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 5505602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 512
Target Start/End: Original strand, 20196697 - 20196849
Alignment:
Q  359 catttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatact 458  Q
    |||||||| ||| |||| |  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||| ||  |    
T  20196697 catttgatgagcctcttgattgctggtatttaagtgtcaaggaatgtacctcattcttttgacacttgaataccatcattcaagatgttggtcggatgtt 20196796  T
Q  459 agagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     ||||  ||| | ||||||||||||||||| || ||||||| ||||||| ||||    
T  20196797 ggagtactgctgcttagcaagtttgaattt-ccccattcagtggtaagataatt 20196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 382 - 498
Target Start/End: Complemental strand, 34683490 - 34683374
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 481  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||| || || ||||  ||| | ||||||||||    
T  34683490 tggtatccaagtgtcaaggaatgcacttcattcttttgacacttgaataccatcattcaagatgttcatcgcatgctggagtgctgctgtttagcaagtt 34683391  T
Q  482 tgaatttgcctcattca 498  Q
    ||||||| || ||||||    
T  34683390 tgaatttaccccattca 34683374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 345 - 512
Target Start/End: Original strand, 1171792 - 1171959
Alignment:
Q  345 cggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 444  Q
    |||||| |||||  |||| ||| ||| |||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||  | || || ||    
T  1171792 cggcagaactccagcattcgatgagcatcttgaatgatggtattcaagtgtcaaggaatgtacctcattcttttgacacttgaataccgtcatttaaaat 1171891  T
Q  445 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | | ||||||| || ||||| ||| | ||| |||||||||||||||| ||||||  ||||||| ||||    
T  1171892 gctcatcgaatcctggagtcatgcagtttaacaagtttgaatttgccccattcaagggtaagataatt 1171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 507
Target Start/End: Complemental strand, 36349891 - 36349763
Alignment:
Q  382 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac---caacgttcaagatgttgatcgaatactagagtcttgccggttagcaa 478  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||   || | ||||||||| | |||| || || ||||| ||| | |||||||    
T  36349891 tggtatccaagtgtcaaggaatgcacctcattcttttgatacttgaataccatcatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaa 36349792  T
Q  479 gtttgaatttgcctcattcagaggtaaga 507  Q
    |||||||||| || |||| ||||||||||    
T  36349791 gtttgaatttaccccatttagaggtaaga 36349763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 364 - 512
Target Start/End: Original strand, 3601967 - 3602115
Alignment:
Q  364 gataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagt 463  Q
    ||||||| |||| |||  || |||||||||| ||| |||||||||| |||||||||||| ||||||| || | ||||||||| |||||||||||| ||||    
T  3601967 gataagcctcttgaacaatgatattcaagtgccaatgaatgcaccttattcttttgacatttgaatatcatcattcaagatgctgatcgaatactggagt 3602066  T
Q  464 cttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    | |||   ||| ||| |||||||||||| ||||||  ||||||| ||||    
T  3602067 cctgctatttaacaattttgaatttgccccattcaagggtaagataatt 3602115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 762472 - 762541
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    |||||||||| || ||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  762472 tatagtactatatttatctatagaaatagtaaatcccgtcctacccgcttgccgacaaacccaaccaagt 762541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 30490915 - 30490984
Alignment:
Q  601 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||  |||||||||||||    
T  30490915 tatagtactagatttatctatagaaatagtaaatccctccctacccacttgtcgataaacccaaccaagt 30490984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 605 - 670
Target Start/End: Original strand, 34016791 - 34016856
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||    
T  34016791 gtactagatttatctgtagaaatagtaaatccagccctagccgcttgttgacgaatccaaccaagt 34016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 30710251 - 30710158
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||||| |||||||||||||| ||||| ||| ||| ||||||||||||    
T  30710251 ttgacacttgaataccattgttcaagatgctcatcgaatactggagtcctgccgattagcaagtttgaa-ttgccccatccag-ggtaagacaatt 30710158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 12743043 - 12743093
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  12743043 ggtattgaagtgtcaaggaatgcacgtcattcttttgacacttgaatacca 12743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 12805861 - 12805911
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  12805861 ggtattgaagtgtcaaggaatgcacgtcattcttttgacacttgaatacca 12805911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 512
Target Start/End: Complemental strand, 4723636 - 4723509
Alignment:
Q  385 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 484  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||| | || || ||| | |||| || ||  |||| ||| | |||| ||||||||    
T  4723636 tatttaagtgtcaaggaatgcacctcattcttttgacgcttaaataccatcatttaaaatgctcatcgcatgctgcagtcatgctgtttagaaagtttga 4723537  T
Q  485 atttgcctcattcagaggtaagacaatt 512  Q
    |||||||  |||||  ||||||| ||||    
T  4723536 atttgccctattcaagggtaagataatt 4723509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 8575694 - 8575787
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  8575694 ttgacacttgaataccattgttcaagatgctcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 8575787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 27660930 - 27661023
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  ||| |||||||| |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  27660930 ttgacacttgaataccattgttgaagatgttcatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 27661023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 33370986 - 33371033
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 430  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  33370986 ggtattaaagtgtcaaagaatgcacctcattcttttgacacttgaata 33371033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 1400152 - 1400102
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  1400152 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 1400102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 4723924 - 4723874
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  4723924 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 4723874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 8538553 - 8538607
Alignment:
Q  344 tcggcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaa 398  Q
    ||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||    
T  8538553 tcggcaggactccaacattcgataagcatcttgaacgctggtattcaagtgtcaa 8538607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 429
Target Start/End: Original strand, 10398147 - 10398193
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaat 429  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  10398147 ggtattgaagtgtcaatgaatgcacctcattcttttgacacttgaat 10398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 17366581 - 17366531
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  17366581 ggtattgaattgtcaaggaatgcacctcattctttagacacttgaatacca 17366531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 36350175 - 36350125
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  36350175 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacca 36350125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 1695147 - 1695196
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 432  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  1695147 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 1695196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 512
Target Start/End: Complemental strand, 8538609 - 8538514
Alignment:
Q  415 ttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||||| ||||||||||| | |||||||  | ||||| ||||| ||| |||||||||| ||||| ||| |||| |||||||||||    
T  8538609 ttttgacacttgaataccagcgttcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaa-ttgccccatccaga-gtaagacaatt 8538514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 35565628 - 35565676
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  35565628 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatac 35565676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 28881644 - 28881551
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||| |||||||  |||||||||| | |||||||||| ||||| ||||| || ||||||||||| ||||| ||| ||| ||||||||||||    
T  28881644 ttgacacttcaataccattgttcaagatgctcatcgaatactggagtcctgccgattggcaagtttgaa-ttgccccatccag-ggtaagacaatt 28881551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 6782 - 6852
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  6782 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaatt 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 7082930 - 7082860
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| | ||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  7082930 ttgacacttgaataccatcattcaagatgctcatcgaatgctggagtcctgccgtttaacaagtttgaatt 7082860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 512
Target Start/End: Complemental strand, 11028174 - 11028011
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 445  Q
    ||||||||||   ||| ||||||| |||| |||| |||||||||||||||||  |||||     |||||||| |||||||||||||||  || |||||||    
T  11028174 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcttt-gacacttgaataccattgtccaagatg 11028076  T
Q  446 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
     | |||||||||| ||||| ||||  ||| |||||||||| ||||| ||| ||| ||||||||||||    
T  11028075 ctcatcgaatactggagtcctgccaattaacaagtttgaa-ttgccccatccag-ggtaagacaatt 11028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 12743379 - 12743428
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  12743379 ggtattgaagtgtcaaggaatgcacctcattc-tgtgacacttgaatacca 12743428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 12806198 - 12806247
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  12806198 ggtattgaagtgtcaaggaatgcacctcattc-tgtgacacttgaatacca 12806247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 33371311 - 33371361
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    |||||| ||||||||| ||||||| |||||| |||||||||||||||||||    
T  33371311 ggtattgaagtgtcaatgaatgcaactcattattttgacacttgaatacca 33371361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 17366449 - 17366409
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  17366449 ttagcaagtttgaatttacctcattcagaggtaagataatt 17366409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 18308617 - 18308665
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  18308617 ggtattgaagtttcaaggaatggacctcattcttttgacatttgaatac 18308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 34683769 - 34683726
Alignment:
Q  390 aagtgtcaaggaatgcacctcattcttttgacacttgaatacca 433  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||    
T  34683769 aagtgtcaaggaatgtaccttattcttttgacatttgaatacca 34683726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 38854811 - 38854717
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||||||  |||| ||| | | |||||||||| ||||| ||||| ||| |||||||||| ||||| ||| ||  ||||||||||||    
T  38854811 ttgacacttgaataccagtgttcgagaggcttatcgaatactggagtcctgccgattaacaagtttgaa-ttgccccatccaagggtaagacaatt 38854717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 1171845 - 1171775
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 487  Q
    ||||||||||||||||| | ||||||||| | ||||||| || ||||  ||||| ||| ||||||||||||    
T  1171845 ttgacacttgaataccatcattcaagatgctcatcgaatgctggagttctgccgtttaacaagtttgaatt 1171775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 512
Target Start/End: Original strand, 19400856 - 19400893
Alignment:
Q  475 gcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  19400856 gcaagtttgaatttacctcattcaaaggtaagacaatt 19400893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 6793326 - 6793278
Alignment:
Q  383 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 431  Q
    |||||| ||||||||| ||||| |||| |||||||||||| ||||||||    
T  6793326 ggtattgaagtgtcaatgaatggaccttattcttttgacagttgaatac 6793278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 10398279 - 10398319
Alignment:
Q  472 ttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||||||||||||||| || ||||||| ||||||||||||    
T  10398279 ttagcaagtttgaatttaccccattcaggggtaagacaatt 10398319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 347 - 507
Target Start/End: Original strand, 15076 - 15236
Alignment:
Q  347 gcaggactccgacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 446  Q
    ||||||||||   ||| ||||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| |     
T  15076 gcaggactccagtattcgataagcctcttgaacgcttgtattcaagtgtcaaggaatgcacctcattctgttgacacttgaatacaagcgttcaagaggc 15175  T
Q  447 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||| || | ||| ||| | || ||||||||| ||||||| ||||||| |||||||    
T  15176 tgatcgaatgctggtgtcctgctgcttggcaagtttggatttgccccattcagtggtaaga 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 15127 - 15037
Alignment:
Q  417 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaaga 507  Q
    ||||||||||||||| | ||||||||| | | |||||||||| ||||| ||| | || ||||||||| ||||||| ||||||| |||||||    
T  15127 ttgacacttgaatacaagcgttcaagaggcttatcgaatactggagtcctgctgctttgcaagtttggatttgccccattcagtggtaaga 15037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 4855 - 4784
Alignment:
Q  262 tcatcaattcatcaattaattataagctagaacaagatgaaaagtgattatgagaataagtatccaaccccct 334  Q
    ||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  4855 tcatcaattcaacaattaatcacaagctagaacaagaagaaaa-tgattatgagaataagtatctaaccccct 4784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 512
Target Start/End: Complemental strand, 17481 - 17378
Alignment:
Q  409 tcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagac 508  Q
    ||||||||||||||||||||||||| | || || ||| | |||| || ||  |||| ||| | |||||||||||||||||||| ||||||  |||||||     
T  17481 tcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctgcagtcctgctgtttagcaagtttgaatttgccccattcaagggtaagat 17382  T
Q  509 aatt 512  Q
    ||||    
T  17381 aatt 17378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 670
Target Start/End: Original strand, 9671 - 9736
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| |||||  ||||||||||||||  | |||  ||||||||||||||||||||||||||    
T  9671 gtactagatttatctaaagaaatagtaaatctggaccttgccgcttgtcgacgaacccaaccaagt 9736  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 670
Target Start/End: Complemental strand, 437 - 372
Alignment:
Q  605 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagt 670  Q
    ||||||||| |||||  ||||||| ||||||  | |||  ||||||||||||||||||||||||||    
T  437 gtactagatttatctaaagaaatactaaatctggaccttgccgcttgtcgacgaacccaaccaagt 372  T

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Target: scaffold0861 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 2760 - 2812
Alignment:
Q  460 gagtcttgccggttagcaagtttgaatttgcctcattcagaggtaagacaatt 512  Q
    ||||| ||| |||||| ||||||||||||||| ||||||| || |||||||||    
T  2760 gagtcctgctggttagtaagtttgaatttgccccattcaggggcaagacaatt 2812  T

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