View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5788-Insertion-7 (Length: 495)
Name: NF5788-Insertion-7
Description: NF5788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5788-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 472; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 8 - 495
Target Start/End: Complemental strand, 8017297 - 8016810
Alignment:
| Q |
8 |
agatgtttatgtagttattttttgtctttgatcatattgactagggagcttctatgatctagcggttgttgcattgtcaaattataatggtatagctgag |
107 |
Q |
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| T |
8017297 |
agatgtttgtgtagttattttttgtctttgatcatattgactagggagcttctatgatctagcggttgttgcattgtcaaattataatggtatagctgag |
8017198 |
T |
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| Q |
108 |
tccataaaattggagattcagttttacaatgttcggcacccactcatatcccacaactttaaaatgctagagctcatgaagcataattgtatattgaagt |
207 |
Q |
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| T |
8017197 |
tccataaaattggagattcggttttacaatgttcgacacccactcatatcccacaactttaaaatgctagagctcatgaagcataattgtatattgaagt |
8017098 |
T |
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| Q |
208 |
ttactttagtcattcttagaacttgttttcttttttcgtattttggcacaggtgctcgtgaatcccatagtagtagagtcgagcatgctgaaggtcccgt |
307 |
Q |
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| T |
8017097 |
ttactttagtcattcttagaacttgttttcttttttcgtattttggcacaggtgctcgtgaatcccatagtagtagagtcgagcatgctgaaggtcccgt |
8016998 |
T |
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| Q |
308 |
tcaactggataaccatgtgggctccatgttccccaagatcgcgccacttagtgctccacaaggaccgcaaccctttcttcctcttcttgcgccgtcacca |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8016997 |
tcaactggataaccatgtgggctccatgttccccaagatcgcgccacttggtgctccacaaggaccgcaaccctttcttcctcttcttgcgccgtcacca |
8016898 |
T |
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| Q |
408 |
atgactccattcaccaatatctctatcccaaagttatcaggtcatttcctaaataatttctcaggtcattttggattttcaacggcta |
495 |
Q |
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| T |
8016897 |
atgactccattcaccaatatctctatcccaaagttatcaggtcatttcctaaataatttctcaggtcattttggattttcaacggcta |
8016810 |
T |
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