View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5788_high_19 (Length: 206)
Name: NF5788_high_19
Description: NF5788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5788_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 8180872 - 8180694
Alignment:
| Q |
15 |
aatatacatgtatatggtccaaacagaaacgagacaaggccaaggttatatttacccatccaagcagaaacaagaacaacaactccaagatagaccaagt |
114 |
Q |
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| T |
8180872 |
aatatacatgtatatggtccaaacagaaacgagacaaggccgaggttatatttacccatccaagcagaaacaagaacaacaactccaagatagaccaagt |
8180773 |
T |
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| Q |
115 |
acaaagcatgctgcaatggtcaaagaattaattaacacttccattattgcatatttgtatagtgtaacatatacatgtt |
193 |
Q |
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| T |
8180772 |
acaaagcatgctgcaatggtcaaagaattaattaactcttccattattgcatatttgtatagtgtaacatatacatgtt |
8180694 |
T |
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