View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5788_low_7 (Length: 395)

Name: NF5788_low_7
Description: NF5788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5788_low_7
NF5788_low_7
[»] chr5 (9 HSPs)
chr5 (13-379)||(20066045-20066411)
chr5 (17-217)||(19002771-19002973)
chr5 (110-173)||(27417070-27417133)
chr5 (139-171)||(19381150-19381182)
chr5 (110-173)||(18384679-18384742)
chr5 (110-173)||(26197664-26197727)
chr5 (110-173)||(33944259-33944322)
chr5 (137-179)||(24417151-24417193)
chr5 (137-179)||(30450015-30450057)
[»] chr1 (3 HSPs)
chr1 (43-374)||(18579293-18579622)
chr1 (17-373)||(23502374-23502729)
chr1 (137-173)||(20175895-20175931)
[»] chr4 (6 HSPs)
chr4 (15-374)||(28802590-28802953)
chr4 (137-173)||(17156382-17156418)
chr4 (110-173)||(6697157-6697220)
chr4 (137-184)||(26816800-26816847)
chr4 (139-173)||(16270024-16270058)
chr4 (137-179)||(54695199-54695241)
[»] chr2 (6 HSPs)
chr2 (73-374)||(19392742-19393041)
chr2 (110-173)||(9509103-9509166)
chr2 (110-173)||(18656157-18656220)
chr2 (110-173)||(45019289-45019352)
chr2 (139-173)||(22103481-22103515)
chr2 (137-173)||(24721029-24721065)
[»] chr3 (9 HSPs)
chr3 (17-217)||(21387925-21388127)
chr3 (137-173)||(2159800-2159836)
chr3 (137-173)||(40089061-40089097)
chr3 (110-173)||(6427246-6427309)
chr3 (110-173)||(8977785-8977848)
chr3 (110-173)||(9542075-9542138)
chr3 (110-173)||(16478454-16478517)
chr3 (137-184)||(28356967-28357014)
chr3 (139-169)||(29763845-29763875)
[»] chr7 (14 HSPs)
chr7 (145-373)||(14972965-14973191)
chr7 (145-373)||(15402441-15402667)
chr7 (110-173)||(5387254-5387317)
chr7 (110-173)||(6539416-6539479)
chr7 (110-173)||(8505988-8506051)
chr7 (110-173)||(9540579-9540642)
chr7 (110-173)||(16137523-16137586)
chr7 (110-173)||(26353638-26353701)
chr7 (110-173)||(32103319-32103382)
chr7 (110-173)||(44902296-44902359)
chr7 (110-173)||(46502053-46502116)
chr7 (139-173)||(11693228-11693262)
chr7 (137-179)||(15180054-15180096)
chr7 (137-173)||(4417131-4417167)
[»] scaffold0163 (1 HSPs)
scaffold0163 (137-173)||(20450-20486)
[»] scaffold0254 (1 HSPs)
scaffold0254 (110-173)||(13316-13379)
[»] scaffold0028 (1 HSPs)
scaffold0028 (137-184)||(99708-99755)
[»] chr8 (3 HSPs)
chr8 (110-173)||(21208309-21208372)
chr8 (139-173)||(14887028-14887062)
chr8 (137-179)||(20748942-20748984)
[»] chr6 (2 HSPs)
chr6 (110-173)||(16902885-16902948)
chr6 (110-173)||(31361758-31361821)
[»] scaffold0764 (1 HSPs)
scaffold0764 (139-173)||(6218-6252)
[»] scaffold0313 (2 HSPs)
scaffold0313 (139-173)||(368-402)
scaffold0313 (139-173)||(14525-14559)
[»] scaffold0233 (1 HSPs)
scaffold0233 (137-179)||(7215-7257)
[»] scaffold0145 (1 HSPs)
scaffold0145 (139-173)||(33240-33274)
[»] scaffold0003 (1 HSPs)
scaffold0003 (139-173)||(153540-153574)
[»] scaffold0382 (2 HSPs)
scaffold0382 (137-173)||(1074-1110)
scaffold0382 (137-173)||(11637-11673)


Alignment Details
Target: chr5 (Bit Score: 343; Significance: 0; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 13 - 379
Target Start/End: Complemental strand, 20066411 - 20066045
Alignment:
Q  13 aatatcaaatggatgttaaatctgttttttaatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatc 112  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20066411 aatatcaaatggatgttaaatctgtttttaaatagtttactaaacaaagaggtatatgtgtcacaaccatctggttttgatgatcctgaacttccggatc 20066312  T
Q  113 acgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20066311 acgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttg 20066212  T
Q  213 tggaagtgttgaccccactttgtttatagtaaacgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaactgatg 312  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20066211 tggaagtgttgacaccactttgtttatagtaaacgaaaaagaaaatatattttacttgttcaagtctatgttgattatatcatctttgggtcaactgatg 20066112  T
Q  313 aaagcttgtgtagagaattttctaagctcatgcagggtgattttaaaatgtctctcatggggcaact 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20066111 aaagcttgtgtagagaattttctaagctcatgcagggtgattttaaaatgtctctcatggggcaact 20066045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 19002973 - 19002771
Alignment:
Q  17 tcaaatggatgttaaatctg--ttttttaatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatcac 114  Q
    |||||||||||||||||  |  ||||  ||||||||||||||  || |||| ||||  || |||||| |||| ||||| |||  ||||  |||||||||     
T  19002973 tcaaatggatgttaaattcgccttttaaaatggtttactaaatgaaaaggtctatgtttcccaaccacccggatttgaggatattgaatatccggatcat 19002874  T
Q  115 gttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtg 214  Q
    |||| ||| |||||||| ||| ||||||| |||||||||||||||||||||||||||||  | ||||||| |||||| ||||||||||| || ||| |||    
T  19002873 gtttacaaattaaaaagagctctatatggactcaaacaagctcctagagcttggtatgaacgtttgagcatgtttttgttggataaaggcttctctcgtg 19002774  T
Q  215 gaa 217  Q
    |||    
T  19002773 gaa 19002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 27417070 - 27417133
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||||| |||||||| ||||||||||||||||||||||||||    
T  27417070 atcatgttttcaaattaacaaaagctatttatggtcttaaacaagctcctagagcttggtatga 27417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 19381182 - 19381150
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtat 171  Q
    |||||||||||||||||||||||||||||||||    
T  19381182 tatggtctcaaacaagctcctagagcttggtat 19381150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 18384679 - 18384742
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  18384679 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 18384742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26197727 - 26197664
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  26197727 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 26197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 33944259 - 33944322
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  33944259 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 33944322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 24417151 - 24417193
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  24417151 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 24417193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 30450057 - 30450015
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  30450057 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 30450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 4e-88; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 43 - 374
Target Start/End: Complemental strand, 18579622 - 18579293
Alignment:
Q  43 aatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatcacgttttcaagttaaaaagggctatatatg 142  Q
    |||||||||| | |||||||||||||   ||||| |||| ||  |||||| |||| |||| ||||  ||||  ||| ||||||||||| |||| | ||||    
T  18579622 aatggtttacaatacaaagaggtatacatgtcacgaccacccaattttgaagatcatgaatttccatatcatatttacaagttaaaaatggctctctatg 18579523  T
Q  143 gtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtggaagtgttgaccccactttgtttatagt 242  Q
    || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||    
T  18579522 gtatcaaacaagctcctagagcttggtattagaggttgagcaagtttttattggataaaggattttcttgtgaaagtgttgacaccactttgtt--tagt 18579425  T
Q  243 aaacgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaactgatgaaagcttgtgtagagaattttctaagctca 342  Q
    |||| |||| ||||| ||||| |||||||| |||  ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||     
T  18579424 aaacaaaaaggaaaagatattatacttgtttaagtgtatgttgatgatatcatctttgggtcaactgttgaaagtttgtgtagagaattttccaagctcg 18579325  T
Q  343 tgcagggtgattttaaaatgtctctcatgggg 374  Q
    |||||||||| ||  |||||||||||||||||    
T  18579324 tgcagggtgagttagaaatgtctctcatgggg 18579293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 373
Target Start/End: Complemental strand, 23502729 - 23502374
Alignment:
Q  17 tcaaatggatgttaaatctg--ttttttaatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatcac 114  Q
    ||||||||||||||||||||  || || ||||||||||||||  ||||||| || |   |  ||||  |||| ||||| |||  ||||  ||| |||||     
T  23502729 tcaaatggatgttaaatctgcattcttaaatggtttactaaatgaagaggtctacgttacctaaccgcccggatttgaggatattgaatatccagatcat 23502630  T
Q  115 gttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtg 214  Q
    |||| ||| |||||||| ||| |||| || |||||||||||||||||||||||| ||||  | |||||||||||||| || || ||||| || | | |||    
T  23502629 gtttacaaattaaaaagagctttatacggactcaaacaagctcctagagcttggaatgaacgtttgagcaagtttttgttagaaaaagggttctttcgtg 23502530  T
Q  215 gaagtgttgaccccactttgtttatagtaaacgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaactgatgaa 314  Q
    ||| ||| |||  ||| || ||  ||||||| | ||||| ||| ||||| |||||||| |||  |||||| || |||| || ||||| || ||| |||      
T  23502529 gaaatgtagacaacaccttatt--tagtaaatgtaaaagtaaagatattatacttgtttaagtatatgtttatgatattatttttggttctactaatg-c 23502433  T
Q  315 agcttgtgtagagaattttctaagctcatgcagggtgattttaaaatgtctctcatggg 373  Q
    |   |||||  ||||||||||||| | |||||| | || ||| ||||||||||||||||    
T  23502432 attatgtgtcaagaattttctaagatgatgcagagggagtttgaaatgtctctcatggg 23502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 20175895 - 20175931
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20175895 tatatggtctcaaacaagctcctcgagcttggtatga 20175931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 374
Target Start/End: Complemental strand, 28802953 - 28802590
Alignment:
Q  15 tatcaaatggatgttaaatctg--ttttttaatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatc 112  Q
    ||||||||||||||||||| ||   || | |||||| |||||||| |||| |||| || ||||||||||   |||||||| |||| |||  || | | ||    
T  28802953 tatcaaatggatgttaaatatgctcttctaaatggtctactaaacgaagaagtatttgtgtcacaaccacttggttttgaagatcttgagttttcaggtc 28802854  T
Q  113 acgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttatt-----ggataaaggattt 207  Q
    | ||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||     | | |||||||||    
T  28802853 atgttttcaagttaaaaagagctctttatggtctcaaacaagctcctaaagcttggtatgagaggttgagcaagttttttttctttagaaaaaaggattt 28802754  T
Q  208 tcttgtggaagtgttgaccccactttgtttatagtaaacgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaac 307  Q
    ||  |||||||||| ||| | ||||||||  | ||||||  ||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||  ||    
T  28802753 tcacgtggaagtgtagacactactttgtt--tggtaaacataaaggaaaatatatttcacttgttcaagtctatgttgatgatatcatctttgggtttac 28802656  T
Q  308 tgatgaaagcttgtgtagagaattttctaagctcatgcagggtgattttaaaatgtctctcatgggg 374  Q
    |||| |||| |||  | ||||| |||||||||  ||||||||||| ||  |||||||| | ||||||    
T  28802655 tgataaaagtttgcttggagaa-tttctaagcaaatgcagggtgagttcgaaatgtcttttatgggg 28802590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 17156382 - 17156418
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17156382 tatatggtctcaaacaagctcctagagctcggtatga 17156418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 6697157 - 6697220
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  6697157 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 6697220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 26816800 - 26816847
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggttgagca 184  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| ||||    
T  26816800 tatatggtcttaaacaagctcctcgagcttggtatgaaaggttaagca 26816847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 16270024 - 16270058
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  16270024 tatggtcttaaacaagctcctagagcttggtatga 16270058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 54695241 - 54695199
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  54695241 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 54695199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 73 - 374
Target Start/End: Complemental strand, 19393041 - 19392742
Alignment:
Q  73 tcacaaccatccggttttgatgatcctgaacttccggatcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatg 172  Q
    ||||||||| |||| ||||| |||| |||| ||||||||||| ||||||| |||||||| ||| | || ||||||||||| |||||||||||||||||||    
T  19393041 tcacaaccacccggatttgaagatcttgaatttccggatcacattttcaaattaaaaagagctctttaaggtctcaaacatgctcctagagcttggtatg 19392942  T
Q  173 agaggttgagcaagtttttattggataaaggattttcttgtggaagtgttgaccccactttgtttatagtaaacgaaaaagaaaatatattttacttgtt 272  Q
    ||||||||||||| ||| | || || ||||| |||||| |||| ||| ||||| | || |||||  |||||||||  || ||||  ||||| ||||||||    
T  19392941 agaggttgagcaaatttcttttagaaaaaggtttttctcgtggtagttttgacactacattgtt--tagtaaacgccaaggaaaggatattctacttgtt 19392844  T
Q  273 caagactatgttgattatatcatctttgggtcaactgatgaaagcttgtgtagagaattttctaagctcatgcagggtgattttaaaatgtctctcatgg 372  Q
    ||||  || |||||| |||| || ||||| || | | |||||||  |||||||||||||||||||||  ||||||||||| ||  |||||||||||||||    
T  19392843 caagtttaggttgatgatattatttttggttctattaatgaaagtatgtgtagagaattttctaagcaaatgcagggtgagttcgaaatgtctctcatgg 19392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 9509166 - 9509103
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  9509166 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 9509103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 18656157 - 18656220
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  18656157 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 18656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 45019289 - 45019352
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  45019289 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 45019352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 22103481 - 22103515
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  22103481 tatggtcttaaacaagctcctagagcttggtatga 22103515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 24721065 - 24721029
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||||| |||||||||| |||||||||||||||    
T  24721065 tatatggtcttaaacaagctcttagagcttggtatga 24721029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 21387925 - 21388127
Alignment:
Q  17 tcaaatggatgttaaatctgtttttt--aatggtttactaaacaaagaggtatatgggtcacaaccatccggttttgatgatcctgaacttccggatcac 114  Q
    |||||||||||||||||| || ||||  |||||||| |||||| |||| || || |  || |||||| |||| ||||| ||   ||||  || ||||||     
T  21387925 tcaaatggatgttaaatccgtctttttaaatggttttctaaacgaagatgtctacgtttcccaaccacccggatttgaggacattgaatatcaggatcat 21388024  T
Q  115 gttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtg 214  Q
    |||| ||| || ||||| ||| ||||||||||| |||||||||||||||||||||||||| | ||||| |||||||| || || ||||| |||||| |||    
T  21388025 gtttacaaattgaaaagagctttatatggtctccaacaagctcctagagcttggtatgagtgtttgagtaagtttttgttagacaaagggttttctcgtg 21388124  T
Q  215 gaa 217  Q
    |||    
T  21388125 gaa 21388127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 2159800 - 2159836
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||| |||||||||||||    
T  2159800 tatatggtctcaaacaagctcctcgagcttggtatga 2159836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 40089097 - 40089061
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40089097 tatatggtctcaaacaagctcctcgagcttggtatga 40089061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 6427246 - 6427309
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  6427246 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 6427309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 8977785 - 8977848
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  8977785 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 8977848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 9542075 - 9542138
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  9542075 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 9542138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 16478517 - 16478454
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  16478517 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 16478454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 28357014 - 28356967
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggttgagca 184  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| ||||    
T  28357014 tatatggtcttaaacaagctcctcgagcttggtatgaaaggttaagca 28356967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 29763845 - 29763875
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggt 169  Q
    |||||||||||||||||||||||||||||||    
T  29763845 tatggtctcaaacaagctcctagagcttggt 29763875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 373
Target Start/End: Complemental strand, 14973191 - 14972965
Alignment:
Q  145 ctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtggaagtgttgaccccactttgtttatagtaa 244  Q
    ||||||||||||||||||||||||||| || | ||||| ||||||||||| || || || ||||| ||||||| ||| ||   ||| |||||  ||||||    
T  14973191 ctcaaacaagctcctagagcttggtataagcgtttgagaaagtttttattagaaaatggtttttcgtgtggaaatgtagataacaccttgtt--tagtaa 14973094  T
Q  245 acgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaactgatgaaagcttgtgtagagaattttctaagctcatg 344  Q
    ||  ||| |||||||||||| |||||| ||||  ||||||||| |||| || ||  | || ||| |||| |   |||||  |||||| |||||||| |||    
T  14973093 acacaaaggaaaatatatttcacttgtccaagtgtatgttgatgatattattttcagttctactaatgacattatgtgtcaagaattctctaagctgatg 14972994  T
Q  345 cagggtgattttaaaatgtctctcatggg 373  Q
    ||||| || ||| | ||||||||||||||    
T  14972993 cagggagagtttgagatgtctctcatggg 14972965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 373
Target Start/End: Complemental strand, 15402667 - 15402441
Alignment:
Q  145 ctcaaacaagctcctagagcttggtatgagaggttgagcaagtttttattggataaaggattttcttgtggaagtgttgaccccactttgtttatagtaa 244  Q
    ||||||||||||||||||||||||||| || | ||||| ||||||||||| || || || ||||| ||||||| ||| ||   ||| |||||  ||||||    
T  15402667 ctcaaacaagctcctagagcttggtataagcgtttgagaaagtttttattagaaaatggtttttcgtgtggaaatgtagataacaccttgtt--tagtaa 15402570  T
Q  245 acgaaaaagaaaatatattttacttgttcaagactatgttgattatatcatctttgggtcaactgatgaaagcttgtgtagagaattttctaagctcatg 344  Q
    ||  ||| |||||||||||| |||||| ||||  ||||||||| |||| || ||  | || ||| |||| |   |||||  |||||| |||||||| |||    
T  15402569 acacaaaggaaaatatatttcacttgtccaagtgtatgttgatgatattattttcagttctactaatgacattatgtgtcaagaattctctaagctgatg 15402470  T
Q  345 cagggtgattttaaaatgtctctcatggg 373  Q
    ||||| || ||| | ||||||||||||||    
T  15402469 cagggagagtttgagatgtctctcatggg 15402441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 5387317 - 5387254
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  5387317 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 5387254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 6539416 - 6539479
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  6539416 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 6539479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 8505988 - 8506051
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  8505988 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 8506051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 9540642 - 9540579
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  9540642 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 9540579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 16137586 - 16137523
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  16137586 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 16137523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26353701 - 26353638
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  26353701 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 26353638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 32103319 - 32103382
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  32103319 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 32103382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 44902296 - 44902359
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  44902296 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 44902359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 46502053 - 46502116
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  46502053 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 46502116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 11693228 - 11693262
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||||||| |||||||    
T  11693228 tatggtctcaaacaagctcctagagctgggtatga 11693262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 15180054 - 15180096
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  15180054 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 15180096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 4417131 - 4417167
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  4417131 tatatggtcttaaacaagctcccagagcttggtatga 4417167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 20450 - 20486
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20450 tatatggtctcaaacaagctcctcgagcttggtatga 20486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 13379 - 13316
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  13379 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 13316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 99755 - 99708
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggttgagca 184  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| ||||    
T  99755 tatatggtcttaaacaagctcctcgagcttggtatgaaaggttaagca 99708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 21208372 - 21208309
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  21208372 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 21208309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 14887062 - 14887028
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  14887062 tatggtcttaaacaagctcctagagcttggtatga 14887028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 20748942 - 20748984
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  20748942 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 20748984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 16902885 - 16902948
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  16902885 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 16902948  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31361758 - 31361821
Alignment:
Q  110 atcacgttttcaagttaaaaagggctatatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||| |||||||| |||| ||  ||| | |||||||| ||||||||||||||||||||||||||    
T  31361758 atcatgttttcaaattaacaaaagctctttatggtcttaaacaagctcctagagcttggtatga 31361821  T

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Target: scaffold0764 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 6252 - 6218
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  6252 tatggtcttaaacaagctcctagagcttggtatga 6218  T

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Target: scaffold0313 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 368 - 402
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  368 tatggtcttaaacaagctcctagagcttggtatga 402  T

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Target: scaffold0313; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 14525 - 14559
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  14525 tatggtcttaaacaagctcctagagcttggtatga 14559  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 7215 - 7257
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatgagaggtt 179  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  7215 tatatggtcttaaacaagctcctcgagcttggtatgaaaggtt 7257  T

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Target: scaffold0145 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 33274 - 33240
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  33274 tatggtcttaaacaagctcctagagcttggtatga 33240  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 153540 - 153574
Alignment:
Q  139 tatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||| ||||||||||||||||||||||||||    
T  153540 tatggtcttaaacaagctcctagagcttggtatga 153574  T

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Target: scaffold0382 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 1074 - 1110
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  1074 tatatggtcttaaacaagctcccagagcttggtatga 1110  T

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Target: scaffold0382; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 11637 - 11673
Alignment:
Q  137 tatatggtctcaaacaagctcctagagcttggtatga 173  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  11637 tatatggtcttaaacaagctcccagagcttggtatga 11673  T

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