View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5789-Insertion-3 (Length: 451)
Name: NF5789-Insertion-3
Description: NF5789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5789-Insertion-3 |
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Alignment Details
Target: chr8 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 7 - 448
Target Start/End: Original strand, 43724936 - 43725377
Alignment:
| Q |
7 |
agttgcaatgcaaaacaagaaaagaactatggctctaattcttagccaattgtttatttccttaatattgtcactcttcttctcgcttactcttcttccc |
106 |
Q |
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| T |
43724936 |
agttgcaatgcaaaacaagaaaagaactatggctctaattcttagccaattgtttatttccttaatactgtcactcttcttctcgcttactcttcttccc |
43725035 |
T |
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| Q |
107 |
tatgctactactagtaaagctaattcctcctccgaatattccataacctctattttcaacgtcacagccgcaaaccacaaaaccagccaaatcctctcct |
206 |
Q |
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| T |
43725036 |
catgctactactagtaaagctaattcctcctccgaatattccataacctctattttcaacgtcacagccgcaaaccacaaaaccagccaaatcctctcct |
43725135 |
T |
|
| Q |
207 |
tcaaaccatttcataatcaagaagaattcccccaaacattttcatcatcttcttccttcaagctcaaactatatccagctgcatctctctataatactca |
306 |
Q |
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| T |
43725136 |
tcaaaccatttcataatcaagaagaattcccccaaacattttcatcatcttcttccttcaagctcaaactatatccagctgcatctctctataatactca |
43725235 |
T |
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| Q |
307 |
tcatcaacacaagaactactatagcctagaactaaatgcttcgttgaacccaggcataaccacaggaaccagcaatttcttagtacaaataggagttgga |
406 |
Q |
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||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
43725236 |
tcatcaacacaagaactactatagcttagacctaaatgcttcgttgaacccaggcataaccacaggaaccagcaatttcttagtacaaatcggagttgga |
43725335 |
T |
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| Q |
407 |
ggaccaccacaaaaattctacatgattttcgacctccaaacc |
448 |
Q |
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| T |
43725336 |
ggaccaccacaaaaattctacatgattttcgacctccaaacc |
43725377 |
T |
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