View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5789-Insertion-6 (Length: 272)

Name: NF5789-Insertion-6
Description: NF5789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5789-Insertion-6
NF5789-Insertion-6
[»] chr8 (45 HSPs)
chr8 (87-131)||(67192-67236)
chr8 (91-131)||(25830277-25830317)
chr8 (89-129)||(35818935-35818975)
chr8 (87-131)||(43285994-43286038)
chr8 (89-131)||(33100500-33100542)
chr8 (89-130)||(1248251-1248292)
chr8 (89-130)||(7376504-7376545)
chr8 (88-125)||(40719680-40719717)
chr8 (90-131)||(42620008-42620049)
chr8 (87-131)||(5771907-5771951)
chr8 (87-131)||(5772003-5772047)
chr8 (91-131)||(10644833-10644873)
chr8 (89-129)||(12959936-12959976)
chr8 (87-131)||(13970915-13970959)
chr8 (89-129)||(16808579-16808619)
chr8 (89-129)||(37033134-37033174)
chr8 (84-131)||(5601018-5601065)
chr8 (84-131)||(5639555-5639602)
chr8 (90-129)||(9048349-9048388)
chr8 (91-130)||(34018808-34018847)
chr8 (88-131)||(35067157-35067200)
chr8 (91-130)||(35937544-35937583)
chr8 (89-131)||(12655920-12655962)
chr8 (91-129)||(22767132-22767170)
chr8 (91-129)||(31806299-31806337)
chr8 (87-129)||(41955925-41955967)
chr8 (89-131)||(43715873-43715914)
chr8 (89-130)||(3155841-3155882)
chr8 (89-130)||(11584094-11584135)
chr8 (87-128)||(29107991-29108032)
chr8 (89-130)||(43066626-43066667)
chr8 (89-130)||(45253640-45253681)
chr8 (87-131)||(1068602-1068646)
chr8 (90-130)||(1158367-1158407)
chr8 (89-129)||(6849147-6849187)
chr8 (91-131)||(7598708-7598748)
chr8 (87-131)||(10839513-10839557)
chr8 (87-131)||(20288529-20288573)
chr8 (87-131)||(21075158-21075202)
chr8 (91-131)||(21526312-21526352)
chr8 (91-131)||(23754738-23754778)
chr8 (91-131)||(25987818-25987858)
chr8 (91-131)||(26026896-26026936)
chr8 (89-129)||(41639821-41639861)
chr8 (91-131)||(42786691-42786731)
[»] chr3 (50 HSPs)
chr3 (88-131)||(37894274-37894317)
chr3 (89-129)||(11335335-11335375)
chr3 (89-129)||(32008031-32008071)
chr3 (91-131)||(48944741-48944781)
chr3 (82-129)||(36907039-36907086)
chr3 (90-129)||(51032657-51032696)
chr3 (88-129)||(40159871-40159912)
chr3 (90-131)||(48287670-48287711)
chr3 (90-131)||(49761217-49761258)
chr3 (91-131)||(29573387-29573427)
chr3 (91-131)||(52963347-52963387)
chr3 (88-131)||(45186583-45186626)
chr3 (88-130)||(7246-7288)
chr3 (89-131)||(26550235-26550277)
chr3 (88-130)||(27162501-27162543)
chr3 (91-129)||(31017427-31017465)
chr3 (87-129)||(33976427-33976469)
chr3 (87-129)||(38359339-38359381)
chr3 (87-129)||(47988518-47988560)
chr3 (87-129)||(47997805-47997847)
chr3 (87-129)||(48007092-48007134)
chr3 (89-131)||(48405408-48405450)
chr3 (89-131)||(54099388-54099430)
chr3 (90-131)||(10811134-10811175)
chr3 (80-113)||(12792627-12792660)
chr3 (90-131)||(19150350-19150391)
chr3 (88-129)||(22813069-22813110)
chr3 (89-130)||(23377980-23378021)
chr3 (88-129)||(26279881-26279922)
chr3 (76-129)||(34628103-34628156)
chr3 (91-132)||(45054974-45055015)
chr3 (88-129)||(50745366-50745407)
chr3 (88-129)||(51410803-51410844)
chr3 (88-129)||(54134849-54134890)
chr3 (88-128)||(8254024-8254064)
chr3 (91-131)||(11327108-11327148)
chr3 (91-131)||(14207289-14207329)
chr3 (91-131)||(14215037-14215077)
chr3 (88-128)||(21579111-21579151)
chr3 (90-130)||(41448208-41448248)
chr3 (89-129)||(43169775-43169815)
chr3 (91-131)||(44813477-44813517)
chr3 (87-131)||(44963850-44963894)
chr3 (88-128)||(45150150-45150190)
chr3 (91-131)||(48352996-48353036)
chr3 (88-128)||(49196693-49196733)
chr3 (87-131)||(50559243-50559287)
chr3 (90-130)||(50652387-50652427)
chr3 (91-131)||(52714733-52714773)
chr3 (91-131)||(54233499-54233539)
[»] chr2 (34 HSPs)
chr2 (88-131)||(6336249-6336292)
chr2 (89-129)||(3585624-3585664)
chr2 (91-129)||(11980651-11980689)
chr2 (91-129)||(31635843-31635881)
chr2 (89-130)||(5031921-5031962)
chr2 (89-130)||(39737718-39737759)
chr2 (89-129)||(1052529-1052569)
chr2 (89-129)||(14797683-14797723)
chr2 (91-130)||(40874293-40874332)
chr2 (91-129)||(6639505-6639543)
chr2 (87-129)||(7438564-7438606)
chr2 (89-131)||(24766150-24766192)
chr2 (89-131)||(38821364-38821406)
chr2 (89-131)||(43658741-43658783)
chr2 (88-129)||(7498024-7498065)
chr2 (88-129)||(13466108-13466149)
chr2 (90-131)||(14328380-14328421)
chr2 (89-130)||(29168723-29168764)
chr2 (90-131)||(41042253-41042293)
chr2 (90-131)||(43057063-43057104)
chr2 (90-131)||(44484687-44484728)
chr2 (89-129)||(3299138-3299178)
chr2 (89-129)||(4723564-4723604)
chr2 (89-129)||(6666018-6666058)
chr2 (90-130)||(14871639-14871679)
chr2 (89-117)||(20534096-20534124)
chr2 (91-131)||(21738647-21738687)
chr2 (88-128)||(28165275-28165315)
chr2 (91-131)||(35334520-35334560)
chr2 (86-130)||(36774533-36774577)
chr2 (90-130)||(36909875-36909915)
chr2 (87-131)||(37731231-37731275)
chr2 (86-130)||(42141626-42141670)
chr2 (90-130)||(44996544-44996584)
[»] chr4 (47 HSPs)
chr4 (87-129)||(22920304-22920346)
chr4 (87-129)||(22971453-22971495)
chr4 (88-129)||(1562569-1562610)
chr4 (90-131)||(32696820-32696861)
chr4 (86-129)||(33820369-33820412)
chr4 (87-130)||(43358609-43358652)
chr4 (91-129)||(3968885-3968923)
chr4 (90-131)||(15522353-15522394)
chr4 (89-130)||(20118779-20118820)
chr4 (88-129)||(55595946-55595987)
chr4 (90-130)||(2004221-2004261)
chr4 (89-129)||(11546935-11546975)
chr4 (89-129)||(12241056-12241096)
chr4 (87-131)||(47288078-47288122)
chr4 (86-129)||(7146153-7146196)
chr4 (91-130)||(8810571-8810610)
chr4 (88-131)||(34995317-34995360)
chr4 (91-130)||(35824138-35824177)
chr4 (91-130)||(36812435-36812474)
chr4 (88-131)||(37514163-37514206)
chr4 (90-129)||(40755920-40755959)
chr4 (85-128)||(42510807-42510850)
chr4 (88-131)||(42815401-42815444)
chr4 (90-129)||(47998593-47998632)
chr4 (91-129)||(25725727-25725765)
chr4 (91-129)||(29407059-29407097)
chr4 (90-128)||(32621637-32621675)
chr4 (91-125)||(33776850-33776884)
chr4 (91-129)||(39881063-39881101)
chr4 (87-129)||(49424853-49424895)
chr4 (89-131)||(51255744-51255786)
chr4 (90-132)||(51359820-51359862)
chr4 (90-132)||(53463100-53463142)
chr4 (87-129)||(53583161-53583203)
chr4 (84-129)||(33278668-33278713)
chr4 (86-131)||(41609710-41609755)
chr4 (94-131)||(42916653-42916690)
chr4 (86-131)||(44257761-44257806)
chr4 (82-131)||(56557724-56557773)
chr4 (91-131)||(1796013-1796053)
chr4 (91-131)||(3078939-3078979)
chr4 (91-131)||(3475869-3475909)
chr4 (88-128)||(23220482-23220522)
chr4 (90-130)||(24088596-24088636)
chr4 (91-131)||(31469020-31469060)
chr4 (87-131)||(43174980-43175023)
chr4 (81-117)||(43434337-43434373)
[»] chr1 (44 HSPs)
chr1 (90-131)||(12999853-12999894)
chr1 (90-129)||(18541084-18541123)
chr1 (87-129)||(12708086-12708128)
chr1 (87-129)||(12713540-12713582)
chr1 (87-129)||(12717631-12717673)
chr1 (89-131)||(21433432-21433474)
chr1 (91-129)||(33076119-33076157)
chr1 (91-131)||(49020435-49020475)
chr1 (90-129)||(25989017-25989056)
chr1 (90-129)||(27810280-27810319)
chr1 (85-128)||(47059913-47059956)
chr1 (88-131)||(48983699-48983742)
chr1 (89-131)||(740987-741029)
chr1 (91-129)||(3606127-3606165)
chr1 (89-131)||(11947793-11947835)
chr1 (87-129)||(15182616-15182658)
chr1 (89-131)||(30973550-30973592)
chr1 (86-128)||(43612103-43612145)
chr1 (90-128)||(47386828-47386866)
chr1 (85-131)||(48858817-48858863)
chr1 (91-129)||(51168656-51168694)
chr1 (87-129)||(51848876-51848918)
chr1 (90-131)||(9566992-9567033)
chr1 (87-132)||(29706733-29706778)
chr1 (93-126)||(29877299-29877332)
chr1 (92-129)||(32939171-32939208)
chr1 (86-119)||(35848407-35848440)
chr1 (87-128)||(42256456-42256497)
chr1 (88-129)||(52233254-52233295)
chr1 (91-131)||(649768-649808)
chr1 (89-129)||(1615034-1615074)
chr1 (87-131)||(4213068-4213112)
chr1 (88-128)||(9011642-9011682)
chr1 (87-131)||(9987947-9987991)
chr1 (91-131)||(19947772-19947812)
chr1 (90-130)||(26501294-26501334)
chr1 (87-131)||(27742613-27742657)
chr1 (88-128)||(40596077-40596117)
chr1 (89-129)||(44672063-44672103)
chr1 (89-129)||(45042259-45042299)
chr1 (91-131)||(49569996-49570036)
chr1 (91-131)||(49931553-49931593)
chr1 (87-131)||(52362478-52362522)
chr1 (91-131)||(52714932-52714972)
[»] chr7 (34 HSPs)
chr7 (89-129)||(6822555-6822595)
chr7 (90-131)||(42584801-42584842)
chr7 (89-129)||(9055265-9055305)
chr7 (90-130)||(13437197-13437237)
chr7 (91-131)||(34108886-34108926)
chr7 (87-131)||(39497333-39497377)
chr7 (91-131)||(41430183-41430223)
chr7 (86-126)||(41590556-41590596)
chr7 (87-131)||(46829475-46829519)
chr7 (88-127)||(16953921-16953960)
chr7 (89-131)||(9363385-9363427)
chr7 (89-131)||(12007217-12007259)
chr7 (81-131)||(25192916-25192965)
chr7 (87-129)||(28824499-28824541)
chr7 (91-129)||(33212042-33212080)
chr7 (87-129)||(42671009-42671051)
chr7 (89-131)||(47448824-47448866)
chr7 (7-52)||(1478654-1478699)
chr7 (92-129)||(2756962-2756999)
chr7 (88-129)||(24700118-24700159)
chr7 (88-129)||(33684677-33684718)
chr7 (88-129)||(37392040-37392081)
chr7 (90-131)||(47954133-47954174)
chr7 (89-129)||(4971288-4971328)
chr7 (89-129)||(4971432-4971472)
chr7 (87-131)||(23910282-23910326)
chr7 (91-131)||(33050183-33050223)
chr7 (89-129)||(35823008-35823048)
chr7 (91-131)||(36352618-36352658)
chr7 (91-131)||(40854686-40854726)
chr7 (86-126)||(41590119-41590159)
chr7 (89-129)||(42276089-42276129)
chr7 (91-131)||(43159606-43159646)
chr7 (88-124)||(43213316-43213352)
[»] chr5 (30 HSPs)
chr5 (91-131)||(22098255-22098295)
chr5 (89-129)||(22647594-22647634)
chr5 (93-131)||(14321986-14322024)
chr5 (87-129)||(33393630-33393672)
chr5 (90-131)||(1293117-1293158)
chr5 (88-129)||(18638858-18638899)
chr5 (90-131)||(18695317-18695358)
chr5 (90-130)||(844035-844075)
chr5 (87-131)||(6758822-6758866)
chr5 (88-131)||(24468317-24468360)
chr5 (89-131)||(13089813-13089855)
chr5 (89-131)||(14011315-14011357)
chr5 (81-115)||(14647552-14647586)
chr5 (91-129)||(31708370-31708408)
chr5 (91-129)||(32873182-32873220)
chr5 (91-129)||(36416095-36416133)
chr5 (90-131)||(4088442-4088483)
chr5 (90-131)||(9168196-9168237)
chr5 (87-128)||(14206396-14206437)
chr5 (89-130)||(14914370-14914411)
chr5 (86-131)||(27487882-27487927)
chr5 (92-129)||(31329159-31329196)
chr5 (90-130)||(2050926-2050966)
chr5 (81-117)||(4434472-4434508)
chr5 (87-131)||(12891127-12891171)
chr5 (91-131)||(16594407-16594447)
chr5 (91-131)||(16690499-16690539)
chr5 (89-129)||(19376165-19376205)
chr5 (91-131)||(21155987-21156027)
chr5 (87-131)||(39032635-39032679)
[»] chr6 (21 HSPs)
chr6 (88-131)||(25127864-25127907)
chr6 (87-129)||(32729885-32729927)
chr6 (91-131)||(1376364-1376404)
chr6 (91-131)||(1384112-1384152)
chr6 (89-129)||(8778905-8778945)
chr6 (89-129)||(9188977-9189017)
chr6 (88-132)||(15368853-15368897)
chr6 (89-129)||(15666806-15666846)
chr6 (87-131)||(17551410-17551454)
chr6 (89-129)||(26391318-26391358)
chr6 (88-131)||(3339530-3339573)
chr6 (89-128)||(16328724-16328763)
chr6 (91-129)||(17835612-17835650)
chr6 (94-131)||(3552185-3552222)
chr6 (89-129)||(3049563-3049603)
chr6 (88-132)||(15318218-15318262)
chr6 (89-129)||(19789109-19789149)
chr6 (87-131)||(27334854-27334898)
chr6 (87-131)||(27395594-27395638)
chr6 (89-129)||(28965873-28965913)
chr6 (89-129)||(29383555-29383595)
[»] scaffold0003 (2 HSPs)
scaffold0003 (90-130)||(337117-337157)
scaffold0003 (91-131)||(366294-366333)
[»] scaffold0184 (1 HSPs)
scaffold0184 (91-129)||(16627-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (91-129)||(56179-56217)
[»] scaffold0049 (1 HSPs)
scaffold0049 (91-129)||(72202-72240)
[»] scaffold0432 (1 HSPs)
scaffold0432 (90-131)||(6551-6592)
[»] scaffold0241 (1 HSPs)
scaffold0241 (88-128)||(5375-5415)
[»] scaffold0085 (1 HSPs)
scaffold0085 (94-130)||(31330-31366)
[»] scaffold0024 (2 HSPs)
scaffold0024 (89-129)||(60467-60507)
scaffold0024 (89-129)||(91946-91986)
[»] scaffold0019 (1 HSPs)
scaffold0019 (90-130)||(72365-72405)
[»] scaffold0016 (1 HSPs)
scaffold0016 (87-131)||(204476-204520)


Alignment Details
Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 67236 - 67192
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  67236 aaaagagaaatgatatttgtacaaccattttctaacaacttttgt 67192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 25830317 - 25830277
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25830317 gagaaatgatatttgtacaaccattttctaacaacttttgt 25830277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 35818935 - 35818975
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  35818935 aagagaaatgatatttgcacaaccattttctaacaattttt 35818975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 43286038 - 43285994
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  43286038 aaaagagaaatgatatttggacaaccattttctaataacttttgt 43285994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 33100542 - 33100500
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  33100542 aagagaaatgatatttgaacaaccattttataacaacttttgt 33100500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 1248251 - 1248292
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  1248251 aagagaaatgatatttgtacaaccattttcttacaacttttg 1248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 7376504 - 7376545
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  7376504 aagagaaatgatatttgtacaaccaatttctaacaacttttg 7376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 40719717 - 40719680
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaac 125  Q
    |||||||||||||||||| |||||||||||||||||||    
T  40719717 aaagagaaatgatatttgtacaaccattttctaacaac 40719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 42620049 - 42620008
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  42620049 agagaaatgatatttgtacatccattttctaacaacttttgt 42620008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 5771951 - 5771907
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  5771951 aaaagagaaatgatatttgaacaaccattttgtgacaacttttgt 5771907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 5772047 - 5772003
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  5772047 aaaagagaaatgatatttgaacaaccattttttgacaacttttgt 5772003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 10644873 - 10644833
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  10644873 gagaaatgatatttgtacaaccattttgtaacaacttttgt 10644833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 12959936 - 12959976
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  12959936 aagagaaatgatatttgcacaaccaatttctaacaattttt 12959976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 13970915 - 13970959
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||    
T  13970915 aaaagagaaatgatatttgtacatccatttcctaacaacttttgt 13970959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 16808579 - 16808619
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  16808579 aagagaattgatatttggacaaccattttctaacaactttt 16808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 37033174 - 37033134
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  37033174 aagagaaatgatatttgcacaaccactttctgacaactttt 37033134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5601065 - 5601018
Alignment:
Q  84 tacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||| ||||||||||||||| ||||||||||| | |||||||||||    
T  5601065 tacaaatgagaaatgatatttgaacaaccattttttgacaacttttgt 5601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 5639555 - 5639602
Alignment:
Q  84 tacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||| ||||||||||||||| ||||||||||| | |||||||||||    
T  5639555 tacaaatgagaaatgatatttgaacaaccattttttgacaacttttgt 5639602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 9048388 - 9048349
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  9048388 agagaaatgatatttgtataaccattttctaacaactttt 9048349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 34018808 - 34018847
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  34018808 gagaaatgatatttgaacaaccattttctgacaacttttg 34018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 35067157 - 35067200
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  35067157 aaagagaaatgatatttgtacaaccatttcttaacaacttttgt 35067200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 35937583 - 35937544
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  35937583 gagaaatgatatttgtacaaccattttgtaacaacttttg 35937544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 12655920 - 12655962
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||    
T  12655920 aagagaaatgatatttgtacaaccattttataataacttttgt 12655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 22767132 - 22767170
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttt 22767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 31806299 - 31806337
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  31806299 gagaaatgatatttgtacaaccattttctaacaattttt 31806337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 41955925 - 41955967
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| | ||||||||| |||||||||||    
T  41955925 aaaagagaaatgatatttgtataaccattttttaacaactttt 41955967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 43715873 - 43715914
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  43715873 aagagaaatgatatttgtacaaccattttctaa-aacttttgt 43715914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 3155841 - 3155882
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||    
T  3155841 aagagaaatgatatttgtacaaccactttttaacaacttttg 3155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 11584094 - 11584135
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||||| |||| |||||    
T  11584094 aagagaaatgatatttgtacaaccattttcttacaatttttg 11584135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 29107991 - 29108032
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  29107991 aaaagagaaatgatatttgtacaatcattttttaacaacttt 29108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 43066667 - 43066626
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||    
T  43066667 aagagaaatgatatttgtacaaccactttttaacaacttttg 43066626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 45253681 - 45253640
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||| |||||||||||| ||||||||||||| ||||||||||    
T  45253681 aagataaatgatatttgtacaaccattttcttacaacttttg 45253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 1068602 - 1068646
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  1068602 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 1068646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 1158407 - 1158367
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||| ||||||| ||||||||    
T  1158407 agagaaatgatatttgtacaaccaatttctaataacttttg 1158367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 6849147 - 6849187
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  6849147 aagagcaatgatatttgaacagccattttctaacaactttt 6849187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 7598708 - 7598748
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  7598708 gagaaatgatatttgaacaaccattttttgacaacttttgt 7598748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 10839557 - 10839513
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||| |||||||||||||| ||||||| ||| |||||||||||||    
T  10839557 aaaaaagaaatgatatttgaacaaccaatttttaacaacttttgt 10839513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 20288529 - 20288573
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  20288529 aaaagagaaatgatatttgtacaaccaatttgtgacaacttttgt 20288573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 21075158 - 21075202
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  21075158 aaaagagaaatgatatttgtacaaccaatttgtgacaacttttgt 21075202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 21526352 - 21526312
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||| ||| |||||||||||||    
T  21526352 gagaaatgatatttgtacaaccactttttaacaacttttgt 21526312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 23754778 - 23754738
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  23754778 gagaaatgatatttgaacaaccattttttaataacttttgt 23754738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 25987858 - 25987818
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  25987858 gagaaatgatatttgaacaaccatttttttacaacttttgt 25987818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 26026896 - 26026936
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  26026896 gagaaatgatatttgaacaaccattttttgacaacttttgt 26026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 41639861 - 41639821
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  41639861 aagagaaatgatatttgtacatccattttctaacaattttt 41639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 42786731 - 42786691
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  42786731 gagaaatgatatttgtacaaccattttcttacaatttttgt 42786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 37894317 - 37894274
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaacttttgt 37894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 11335375 - 11335335
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11335375 aagagaaatgatatttgtacaaccattttctaacaactttt 11335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 32008031 - 32008071
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  32008031 aagagaaatgatatttgcacaaccaatttctaacaactttt 32008071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 48944781 - 48944741
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  48944781 gagaaatgatatttgtacaaccattttctaacaacttttgt 48944741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 36907039 - 36907086
Alignment:
Q  82 tttacaaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  36907039 tttacaaaagagaaatgatatttatacaaccattttataacaactttt 36907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 51032696 - 51032657
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  51032696 agagaaatgatatttgtacaaccattttctaacaactttt 51032657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 40159912 - 40159871
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaactttt 40159871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 48287670 - 48287711
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  48287670 agagaaatgatatttgtacaaccattttataacaacttttgt 48287711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 49761258 - 49761217
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  49761258 agagaaatgatatttgtacaaccattttctaacaatttttgt 49761217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 29573427 - 29573387
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  29573427 gagaaatgatatttgtacaaccattttgtaacaacttttgt 29573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 52963387 - 52963347
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttttgt 52963347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 45186626 - 45186583
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||    
T  45186626 aaagagaaaagatatttgtacaaccattttctaacaatttttgt 45186583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 7288 - 7246
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||||| |||| |||||||| ||||||||||    
T  7288 aaagagaaatgatatttgtacaatcattttctgacaacttttg 7246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 26550235 - 26550277
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    
T  26550235 aagagaaatgatatttgcacaaccattttttaataatttttgt 26550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 27162543 - 27162501
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  27162543 aaagagaagtgatatttgtacaaccattttgtaacaacttttg 27162501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 31017465 - 31017427
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31017465 gagaaatgatatttgtacaatcattttctaacaactttt 31017427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 33976469 - 33976427
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  33976469 aaaagagaaatgatatttgaacatccattttgtaacaactttt 33976427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 38359381 - 38359339
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  38359381 aaaagagaaatgatatttgtacaatcattttttaacaactttt 38359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 47988560 - 47988518
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  47988560 aaaagtgaaatgatatttgtacaactattttctaacaactttt 47988518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 47997847 - 47997805
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  47997847 aaaagtgaaatgatatttgtacaactattttctaacaactttt 47997805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 48007134 - 48007092
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  48007134 aaaagtgaaatgatatttgtacaactattttctaacaactttt 48007092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 48405408 - 48405450
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  48405408 aagagaaatgatatttgtacaaccattttgtgacaacttttgt 48405450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 54099430 - 54099388
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||    
T  54099430 aagagaaataatatttgtacatccattttctaacaacttttgt 54099388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 10811134 - 10811175
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| | |||||||||||    
T  10811134 agagaaatgatatttgaacaaccattttatgacaacttttgt 10811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 12792627 - 12792660
Alignment:
Q  80 catttacaaaagagaaatgatatttgcacaacca 113  Q
    |||||||||||||||||||||||||| |||||||    
T  12792627 catttacaaaagagaaatgatatttgtacaacca 12792660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 19150391 - 19150350
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  19150391 agagaaatgatatttgtacaatcattttttaacaacttttgt 19150350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 22813069 - 22813110
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  22813069 aaagagaaatgatatttgtacaaccactttctgacaactttt 22813110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 23377980 - 23378021
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||||  |||||||||||| ||||||||||    
T  23377980 aagagaaatgatatttgtgcaaccattttcttacaacttttg 23378021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 26279881 - 26279922
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  26279881 aaagagaaatgatatttgtacaaccactttctgacaactttt 26279922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 34628156 - 34628103
Alignment:
Q  76 agtgcatttacaaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||  | |||| |||||||||||| ||||||||||| |||||||||||    
T  34628156 agtgcatttctataagataaatgatatttgtacaaccattttttaacaactttt 34628103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 45054974 - 45055015
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||    
T  45054974 gagaaatgatatttgaacatccattttctgacaacttttgtt 45055015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 50745366 - 50745407
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| |||||||||||| |||||||||||||||||| ||||    
T  50745366 aaagaaaaatgatatttgtacaaccattttctaacaattttt 50745407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 51410803 - 51410844
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  51410803 aaagagaaatgatatttgtacaaccactttctcacaactttt 51410844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 54134849 - 54134890
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  54134849 aaagagaaatgatatttgtacaaccatttttttacaactttt 54134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 8254024 - 8254064
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  8254024 aaagagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 11327108 - 11327148
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaacttttgt 11327148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 14207329 - 14207289
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  14207329 gagaaatgatatttgaacaacgattttgtaacaacttttgt 14207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 14215077 - 14215037
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  14215077 gagaaatgatatttgaacaacgattttgtaacaacttttgt 14215037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 21579111 - 21579151
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  21579111 aaagagaaatgatatttatacaaccaatttctaacaacttt 21579151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 41448248 - 41448208
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  41448248 agagaaatgatatttgtacaaccatttttaaacaacttttg 41448208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 43169815 - 43169775
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  43169815 aagagaaatgatatttgtacaaccattttgtgacaactttt 43169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 44813517 - 44813477
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  44813517 gagaaatgatatatgtacaatcattttctaacaacttttgt 44813477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 44963894 - 44963850
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||| ||||||||| || |||| ||||||||||||||||||||    
T  44963894 aaaagataaatgatatctgaacaatcattttctaacaacttttgt 44963850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 45150150 - 45150190
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  45150150 aaagagaaatgatatttgaacaatcatttgctaacaacttt 45150190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 48352996 - 48353036
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  48352996 gagaaatgatatttgtacatccattttttaacaacttttgt 48353036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 49196693 - 49196733
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 50559287 - 50559243
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  50559287 aaaagagaaatgatatttgtacaactattttttgacaacttttgt 50559243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 50652387 - 50652427
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  50652387 agagaaatgatatttgtacaaccattttatgacaacttttg 50652427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 52714733 - 52714773
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||| |||||||||||||| ||||||    
T  52714733 gagaaatgatatttgtacatccattttctaacaatttttgt 52714773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 54233539 - 54233499
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  54233539 gagaaatgatatttgtacaaccatttttttacaacttttgt 54233499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 6336249 - 6336292
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  6336249 aaagagaaatgatatttgtacaaccattttctaacaacttttgt 6336292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 3585624 - 3585664
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  3585624 aagagaaatgatatttgcacaaccaatttctaacaactttt 3585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 11980651 - 11980689
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttt 11980689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 31635881 - 31635843
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttt 31635843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 5031921 - 5031962
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  5031921 aagagaaatgatatttgtacaaccattttgtaacaacttttg 5031962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 39737759 - 39737718
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  39737759 aagagaaatgatatttgtacaaccaatttctaacaacttttg 39737718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 1052569 - 1052529
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  1052569 aagagaaatgatatttgtacaaccattttttaacaactttt 1052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 14797723 - 14797683
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  14797723 aagagaaatgatatttgtacaaccaatttctaacaactttt 14797683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 40874332 - 40874293
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  40874332 gagaaatgatatttgtacaaccattttttaacaacttttg 40874293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 6639543 - 6639505
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  6639543 gagaaataatatttgtacaaccattttctaacaactttt 6639505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 7438564 - 7438606
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| |||||||||||  ||||||||||    
T  7438564 aaaagagaaatgatatttgaacaaccatttttaaacaactttt 7438606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 24766150 - 24766192
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||    
T  24766150 aagagaaatgatatttgtacaaccattttttaataacttttgt 24766192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 38821364 - 38821406
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  38821364 aagagaaatgatatttgaacaaccattttatgacaacttttgt 38821406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 43658783 - 43658741
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||    
T  43658783 aagagaaatgatatttgtacaatcatttcctaacaacttttgt 43658741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 7498065 - 7498024
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  7498065 aaagagaaatgatatttgtacaaccattttattacaactttt 7498024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 13466149 - 13466108
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  13466149 aaagagaaatgatatttgtacaaccaatttctaacaattttt 13466108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 14328380 - 14328421
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  14328380 agagaaatgatatatgtacaacaattttctaacaacttttgt 14328421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 29168723 - 29168764
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||| | ||||||||||    
T  29168723 aagagaaatgatatttgtacaaccattttttgacaacttttg 29168764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 41042253 - 41042293
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  41042253 agagaaatgatatttgaacaaccatttt-taacaacttttgt 41042293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 43057063 - 43057104
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  43057063 agagaaatgatatttgaacaaccactttttaacaacttttgt 43057104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 44484728 - 44484687
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| |||||| ||||||    
T  44484728 agagaaatgatatttgtacaaccattttgtaacaatttttgt 44484687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 3299178 - 3299138
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  3299178 aagagaaatgatatttgtacaaccattttatgacaactttt 3299138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 4723564 - 4723604
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||| || ||||||||||| |||||||||||    
T  4723564 aagagaaatgatatatgtacaaccattttttaacaactttt 4723604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 6666018 - 6666058
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  6666018 aagagaaatgatatttgtacaaccattttattacaactttt 6666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 14871639 - 14871679
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||||| |||| |||||    
T  14871639 agagaaatgatatttgtacaaccattttcttacaatttttg 14871679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Complemental strand, 20534124 - 20534096
Alignment:
Q  89 aagagaaatgatatttgcacaaccatttt 117  Q
    |||||||||||||||||||||||||||||    
T  20534124 aagagaaatgatatttgcacaaccatttt 20534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 21738687 - 21738647
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  21738687 gagaaatgatatttgtacaaccattttctaataatttttgt 21738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 28165315 - 28165275
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||| ||||||| |||||||||| |||||||||||    
T  28165315 aaagagaaataatatttgaacaaccatttgctaacaacttt 28165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 35334520 - 35334560
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  35334520 gagaaatgatatttgtacaaccattttataataacttttgt 35334560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 36774533 - 36774577
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||    
T  36774533 caaaagagaaataatatttgtagagccattttctaacaacttttg 36774577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 36909915 - 36909875
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  36909915 agagaaatgatatttgtacaaccattttgtgacaacttttg 36909875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 37731275 - 37731231
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  37731275 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 37731231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 42141670 - 42141626
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||    
T  42141670 caaaagagaaatgatatatgtacaaccattttttcacaacttttg 42141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 44996544 - 44996584
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  44996544 agagaaatggtatttgtacaaccattttcttacaacttttg 44996584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 22920346 - 22920304
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  22920346 aaaagagaaatgatatttgcacaaccaatttctaacaactttt 22920304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 22971453 - 22971495
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  22971453 aaaagagaaatgatatttgcacaaccaatttctaacaactttt 22971495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 1562610 - 1562569
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1562610 aaagagaaatgatatttgtacaaccattttctaacaactttt 1562569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 32696861 - 32696820
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32696861 agagaaatgatatttgtacaaccattttctaacaacttttgt 32696820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 33820412 - 33820369
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  33820412 caaaagagaaatgatatttgtacaactattttctaacaactttt 33820369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 43358609 - 43358652
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  43358609 aaaagagaaatgatatttgtacaaccaatttctaacaacttttg 43358652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 3968885 - 3968923
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3968885 gagaaatgatatttgtacaaccattttctaacaactttt 3968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 15522353 - 15522394
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  15522353 agagaaatgatatatgtacaaccattttctaacaacttttgt 15522394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 20118779 - 20118820
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  20118779 aagagaaatgatatttgaacaaccattttataacaacttttg 20118820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 55595946 - 55595987
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  55595946 aaagagaaatgatatttgtacaaccaatttctaacaactttt 55595987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 2004261 - 2004221
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  2004261 agagaaatgatatttgaacaaccattttttaacaacttttg 2004221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 11546975 - 11546935
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  11546975 aagagaaatgatatttttacaaccattttctaacaactttt 11546935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 12241056 - 12241096
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttt 12241096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 47288078 - 47288122
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||    
T  47288078 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgt 47288122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 7146196 - 7146153
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||| |||||||||||  ||||||||||    
T  7146196 caaaagagaaatgatatttgaacaaccatttttaaacaactttt 7146153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 8810571 - 8810610
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  8810571 gagaaatgatatttgtacaaccattttcttacaacttttg 8810610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 34995317 - 34995360
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||    
T  34995317 aaagagaaattatatttgtacaaccattttgtaacaacttttgt 34995360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 35824177 - 35824138
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  35824177 gagaaatgatatttgtacaaccattttttaacaacttttg 35824138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 36812474 - 36812435
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  36812474 gagaaatgatatttgtacaaccaatttctaacaacttttg 36812435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 37514206 - 37514163
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||    
T  37514206 aaagagaaatgatatttgtacatccattttgtaacaacttttgt 37514163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 40755920 - 40755959
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  40755920 agagaaatgatatttgtacaaccattttctaacaattttt 40755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 42510807 - 42510850
Alignment:
Q  85 acaaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||    
T  42510807 acaaaagagcaatgatatttgaacaaccatttgctaacaacttt 42510850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 42815401 - 42815444
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgt 42815444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 47998593 - 47998632
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  47998593 agagaaatgatatttgtacaaccattttgtaacaactttt 47998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 25725765 - 25725727
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttt 25725727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 29407097 - 29407059
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  29407097 gagaaatgatatttgtacaaccattttctaacaagtttt 29407059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 32621637 - 32621675
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaacttt 32621675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 33776884 - 33776850
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaac 125  Q
    ||||||||||||||| |||||||||||||||||||    
T  33776884 gagaaatgatatttgtacaaccattttctaacaac 33776850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 39881101 - 39881063
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttt 39881063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 49424895 - 49424853
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| |||||| |||| |||||||||||    
T  49424895 aaaagagaaatgatatttgtacaacctttttgtaacaactttt 49424853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 51255744 - 51255786
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  51255744 aagagaaatgatatttgaacaaccattttttgacaacttttgt 51255786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 51359862 - 51359820
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    |||||||||||||||| ||||||||||| | ||||||||||||    
T  51359862 agagaaatgatatttgtacaaccattttgtgacaacttttgtt 51359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 53463142 - 53463100
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    |||||||||||||||| ||||||||||| |||||| |||||||    
T  53463142 agagaaatgatatttgtacaaccattttataacaatttttgtt 53463100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 53583203 - 53583161
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||    
T  53583203 aaaagagaaatgatatttgtacaaccactttctcacaactttt 53583161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 33278668 - 33278713
Alignment:
Q  84 tacaaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||||| ||||| ||||| | |||||||||    
T  33278668 tacaaaagagaaatgatatttgaacaactattttgtgacaactttt 33278713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 41609755 - 41609710
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||||| ||| ||||||| | |||||||||||    
T  41609755 caaaagagaaatgatatttgtacatccattttatgacaacttttgt 41609710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 42916653 - 42916690
Alignment:
Q  94 aaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  42916653 aaatgatatttgaacaaccattttataacaacttttgt 42916690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 44257806 - 44257761
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  44257806 caaaagagaaatgatatttgtgcaatcattttctaacaatttttgt 44257761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 56557724 - 56557773
Alignment:
Q  82 tttacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||| ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  56557724 tttagaaaagagaaatgatatttgaacaacaattttatgacaacttttgt 56557773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 1796053 - 1796013
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  1796053 gagaaatgatatttgtacaacaattttttaacaacttttgt 1796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 3078979 - 3078939
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  3078979 gagaaatgatatttgtacaatcattttgtaacaacttttgt 3078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 3475869 - 3475909
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  3475869 gagaaatgatatttgtacaaccattttatgacaacttttgt 3475909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 23220522 - 23220482
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||| ||||||||||| |||||||||| |||||||||||    
T  23220522 aaagagcaatgatatttgaacaaccatttgctaacaacttt 23220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 24088636 - 24088596
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  24088636 agagaaatgatatttgtacaaccattttatgacaacttttg 24088596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 31469060 - 31469020
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  31469060 gagaaatgatatatgtacaaccattttctaacaatttttgt 31469020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 43174980 - 43175023
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  43174980 aaaagagaaatgatatttgaacaaccatttt-ttacaacttttgt 43175023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 43434337 - 43434373
Alignment:
Q  81 atttacaaaagagaaatgatatttgcacaaccatttt 117  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43434337 atttaaaaaagagaaatgatatttgtacaaccatttt 43434373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 12999894 - 12999853
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  12999894 agagaaatgatatttgtacaaccattttctaacaacttttgt 12999853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 18541123 - 18541084
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  18541123 agagaaatgatatttgtacaaccattttctaacaactttt 18541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 12708086 - 12708128
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12708086 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12708128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 12713540 - 12713582
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12713540 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 12717631 - 12717673
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12717631 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12717673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21433474 - 21433432
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  21433474 aagagaaatgatatttgtacaaccattttgtaacaacttttgt 21433432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 33076119 - 33076157
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33076119 gagaaatgatatttgtacaaccattttctaacaactttt 33076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 49020475 - 49020435
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  49020475 gagaaatgatatttgtacaaccattttttaacaacttttgt 49020435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 25989056 - 25989017
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  25989056 agagaaatgatatttgtacaaccattttttaacaactttt 25989017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 27810319 - 27810280
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  27810319 agagaaatgatatttgtacaaccaatttctaacaactttt 27810280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 47059956 - 47059913
Alignment:
Q  85 acaaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  47059956 acaaatgagaaatgatatttgtacaaccattttttaacaacttt 47059913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 48983742 - 48983699
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||||||||||| | |||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttttgt 48983699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 741029 - 740987
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||  ||||| |||||||||||||||||||    
T  741029 aagagaaatgatatttatacaactattttctaacaacttttgt 740987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 3606165 - 3606127
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  3606165 gagaaatgatatttgtacaaccaatttctaacaactttt 3606127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11947793 - 11947835
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  11947793 aagagaaatgatatttgtacaaccattttatgacaacttttgt 11947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 15182658 - 15182616
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||| |||||||||||||| ||||| |||||||||||||||||    
T  15182658 aaaaaagaaatgatatttgtacaactattttctaacaactttt 15182616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30973550 - 30973592
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||    
T  30973550 aagagaaatgatatttgtacaacccttttctaacaatttttgt 30973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 43612145 - 43612103
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||||| ||||||||||| | ||||||||    
T  43612145 caaaagagaaatgatatttgtacaaccattttatgacaacttt 43612103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 47386866 - 47386828
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  47386866 agagaaatgatatttgtacaaccattttataacaacttt 47386828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 48858817 - 48858863
Alignment:
Q  85 acaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||||| ||||||| ||| | |||||||||||    
T  48858817 acaaaagagaaatgatatttgaacaaccactttttgacaacttttgt 48858863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 51168656 - 51168694
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  51168656 gagaaatgatatttgaacaaccatttgctaacaactttt 51168694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 51848876 - 51848918
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||| || ||||||||| |||||||||||||||||||||||    
T  51848876 aaaagataactgatatttgtacaaccattttctaacaactttt 51848918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 9567033 - 9566992
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| | |||||||||||    
T  9567033 agagaaatgatatttgaacaaccattttttgacaacttttgt 9566992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 29706778 - 29706733
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    ||||||||||||||||||| ||||||||||| | | ||||||||||    
T  29706778 aaaagagaaatgatatttgtacaaccattttatgataacttttgtt 29706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 29877299 - 29877332
Alignment:
Q  93 gaaatgatatttgcacaaccattttctaacaact 126  Q
    ||||||||||||| ||||||||||||||||||||    
T  29877299 gaaatgatatttgtacaaccattttctaacaact 29877332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 32939171 - 32939208
Alignment:
Q  92 agaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32939171 agaaatgatatttgaacaaccatttgctaacaactttt 32939208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 35848407 - 35848440
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttct 119  Q
    |||||||||||||||||||| |||||||||||||    
T  35848407 caaaagagaaatgatatttgtacaaccattttct 35848440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 42256456 - 42256497
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||||||||||||||||| ||||||||||| | ||||||||    
T  42256456 aaaagagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 52233295 - 52233254
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||||||||| |||| ||||    
T  52233295 aaagagaaatgatatttgtacaaccattttctcacaattttt 52233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 649768 - 649808
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgt 649808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 1615034 - 1615074
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  1615034 aagagaaatgatatttgtacaaccactttctcacaactttt 1615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 4213068 - 4213112
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| | | |||||||||    
T  4213068 aaaagagaaatgatatttgaacaaccattttttgataacttttgt 4213112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 9011642 - 9011682
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  9011642 aaagagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 9987947 - 9987991
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  9987947 aaaagagaaatgatatttgaacaaccaatttttgacaacttttgt 9987991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 19947812 - 19947772
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  19947812 gagaaatgatatttgaacaaccattttttgacaacttttgt 19947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 26501294 - 26501334
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| ||| ||||||||    
T  26501294 agagaaatgatatttgtacaaccattttgtaataacttttg 26501334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 27742613 - 27742657
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  27742613 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 27742657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 40596117 - 40596077
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  40596117 aaagagaaatgatatttgtacaaccattttgtgacaacttt 40596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 44672103 - 44672063
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  44672103 aagagaaatgatatttgtacaatcattttttaacaactttt 44672063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 45042259 - 45042299
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||| |||||||||||| ||||    
T  45042259 aagagaaatgatatttgtacaactattttctaacaattttt 45042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 49569996 - 49570036
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||| |||||| ||||||||||||||    
T  49569996 gagaaatgatatttgtacatccatttcctaacaacttttgt 49570036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 49931553 - 49931593
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  49931553 gagaaatgatatttgtacaatcattttttaacaacttttgt 49931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 52362478 - 52362522
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||    
T  52362478 aaaagagaaatgatatttgaacatccattttatgacaacttttgt 52362522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 52714972 - 52714932
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  52714972 gagaaatgatatttgaacatccattttataacaacttttgt 52714932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 6822595 - 6822555
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  6822595 aagagaaatgatatttgtacaaccattttctaacaactttt 6822555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 42584801 - 42584842
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  42584801 agagaaatgatatatgtacaaccattttctaacaacttttgt 42584842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 9055265 - 9055305
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  9055265 aagagaaatgatatttgtacaaccaatttctaacaactttt 9055305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 13437197 - 13437237
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  13437197 agagaaatgatatttgcacaaccattttgtgacaacttttg 13437237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 34108926 - 34108886
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  34108926 gagaaatgatatatgtacaaccattttctaacaacttttgt 34108886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 39497377 - 39497333
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||    
T  39497377 aaaagagaaatgatatttgtacaaccattttttaacaacctttgt 39497333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 41430223 - 41430183
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  41430223 gagaaatgatatatggacaaccattttctaacaacttttgt 41430183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 41590596 - 41590556
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaact 126  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  41590596 caaaagagaaatgatatttgtacaaccattttataacaact 41590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 46829475 - 46829519
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46829475 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgt 46829519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 16953921 - 16953960
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactt 127  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  16953921 aaagaaaaatgatatttacacaaccattttctaacaactt 16953960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 9363385 - 9363427
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  9363385 aagagaaatgatatttgtacaatcattttataacaacttttgt 9363427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 12007259 - 12007217
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  12007259 aagagaaatgatatttgaacaaccattttttgacaacttttgt 12007217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 25192965 - 25192916
Alignment:
Q  81 atttacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||||||||    
T  25192965 atttaaaaaagagaaatgatatttgaacaaccatttt-ttacaacttttgt 25192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 28824499 - 28824541
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||    
T  28824499 aaaagagaaatgatatttgtacaaccactttctgacaactttt 28824541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 33212042 - 33212080
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  33212042 gagaaatgatatttgtacaaccattttctaacaattttt 33212080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 42671009 - 42671051
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| | ||||||||| |||||||||||    
T  42671009 aaaagagaaatgatatttgaagaaccattttttaacaactttt 42671051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 47448824 - 47448866
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  47448824 aagagaaatgatatttgaacaaccattttttgacaacttttgt 47448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 1478699 - 1478654
Alignment:
Q  7 atattataaatcctacaccttcattcagacacttttacaaacacct 52  Q
    ||||||||| |||||||| |||||||||||| | ||||||||||||    
T  1478699 atattataagtcctacacattcattcagacaatcttacaaacacct 1478654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 2756999 - 2756962
Alignment:
Q  92 agaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  2756999 agaaatgatatttgtacaaccaatttctaacaactttt 2756962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 24700118 - 24700159
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  24700118 aaagagaaatgatatttgtacaatcattttgtaacaactttt 24700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 33684677 - 33684718
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  33684677 aaagagaaatgatatttgtacaaccactttctcacaactttt 33684718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 37392040 - 37392081
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaactttt 37392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 47954174 - 47954133
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||| | ||||||||||| ||||||||||||||||||||    
T  47954174 agagaaacggtatttgcacaatcattttctaacaacttttgt 47954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 4971288 - 4971328
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  4971288 aagagaaatgatatttgtacaaccattttgtgacaactttt 4971328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 4971472 - 4971432
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||| ||||||||||| |||||||||| ||||||||||||    
T  4971472 aagagcaatgatatttgaacaaccatttgctaacaactttt 4971432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 23910326 - 23910282
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||    
T  23910326 aaaatagaaatgatatttgtacaaccattttttgacaacttttgt 23910282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 33050183 - 33050223
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaacttttgt 33050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 35823048 - 35823008
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  35823048 aagagaaatgatatttgtacatccattttctaacaattttt 35823008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 36352658 - 36352618
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  36352658 gagaaatgatatatgtacaaccattttgtaacaacttttgt 36352618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 40854726 - 40854686
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| || ||| |||||||||||||||||||||    
T  40854726 gagaaatgatatctgtacatccattttctaacaacttttgt 40854686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 41590159 - 41590119
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaact 126  Q
    |||||||||| ||||||||| ||||||||||| ||||||||    
T  41590159 caaaagagaagtgatatttgtacaaccattttataacaact 41590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 42276089 - 42276129
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||| |||||||||||| ||||    
T  42276089 aagagaaatgatatttgtacaactattttctaacaattttt 42276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 43159646 - 43159606
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  43159646 gagaaatgatatttgaacaaccattttttaacaatttttgt 43159606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 43213316 - 43213352
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaa 124  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  43213316 aaagagaaatgatatttgtacaaccactttctaacaa 43213352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 22098255 - 22098295
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22098255 gagaaatgatatttgtacaaccattttctaacaacttttgt 22098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 22647634 - 22647594
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22647634 aagagaaatgatatttgcacaaccaatttctaacaactttt 22647594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 14322024 - 14321986
Alignment:
Q  93 gaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaacttttgt 14321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 33393630 - 33393672
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  33393630 aaaagagaaatgatatttgtacaaccattttctcacaactttt 33393672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 1293158 - 1293117
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  1293158 agagaaatgatatttgtacaaccattttttaacaacttttgt 1293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 18638899 - 18638858
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  18638899 aaagagaaatgatatttgcacaaccattttattacaactttt 18638858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 18695317 - 18695358
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  18695317 agagaaatgatatttgtacaaccattttgtaacaacttttgt 18695358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 844035 - 844075
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  844035 agagaaatgatatttgcacaaccattttttgacaacttttg 844075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 6758866 - 6758822
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| || |||||||||||||||||| ||||||    
T  6758866 aaaagagaaatgatatatgtacaaccattttctaacaatttttgt 6758822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 24468360 - 24468317
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| |||||||||||  ||||||||||||    
T  24468360 aaagagaaatgatatttgaacaaccatttttaaacaacttttgt 24468317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 13089855 - 13089813
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  13089855 aagagaaatgatatttgaacaaccattttttgacaacttttgt 13089813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 14011315 - 14011357
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  14011315 aagagaaatgatatttgaacaatcattttgtaacaacttttgt 14011357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 14647552 - 14647586
Alignment:
Q  81 atttacaaaagagaaatgatatttgcacaaccatt 115  Q
    ||||||||||||||||||||||||| |||||||||    
T  14647552 atttacaaaagagaaatgatatttgtacaaccatt 14647586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 31708370 - 31708408
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  31708370 gagaaatgatatttgtacaaccattttataacaactttt 31708408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 32873220 - 32873182
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  32873220 gagaaatgatatttgtacaaccaatttctaacaactttt 32873182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 36416133 - 36416095
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36416133 gagaaatgatatttgtacaaccattttctaacaattttt 36416095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 4088442 - 4088483
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  4088442 agagaaatgatatttgtacatccattttataacaacttttgt 4088483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 9168237 - 9168196
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  9168237 agagaaataatatttgtacaaccatttcctaacaacttttgt 9168196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 14206396 - 14206437
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||||||||||||||||| ||||||||||| | ||||||||    
T  14206396 aaaagagaaatgatatttgtacaaccattttttgacaacttt 14206437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 14914370 - 14914411
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    ||||||||||||||||| ||||||||||| | ||||||||||    
T  14914370 aagagaaatgatatttgtacaaccattttgtgacaacttttg 14914411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 27487882 - 27487927
Alignment:
Q  86 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||||| |||| || ||| |||||||||||||    
T  27487882 caaaagagaaatgatatttgaacaatcaatttttaacaacttttgt 27487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 31329196 - 31329159
Alignment:
Q  92 agaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  31329196 agaaatgatatttgcacaaccactttataacaactttt 31329159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 2050926 - 2050966
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||| |||||| |||||    
T  2050926 agagaaatgatatttgtacaaccattttgtaacaatttttg 2050966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 4434472 - 4434508
Alignment:
Q  81 atttacaaaagagaaatgatatttgcacaaccatttt 117  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4434472 atttataaaagagaaatgatatttgtacaaccatttt 4434508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 12891171 - 12891127
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| |||||||||||   |||||||||||    
T  12891171 aaaagagaaatgatatttgtacaaccatttttgcacaacttttgt 12891127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 16594447 - 16594407
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  16594447 gagaaatgatatttgaacatccattttttaacaacttttgt 16594407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 16690499 - 16690539
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||  |||||||||||||    
T  16690499 gagaaatgatatttgtacaaccatttcttaacaacttttgt 16690539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 19376205 - 19376165
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  19376205 aagagaaatgatatttgtacaaccactttctgacaactttt 19376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 21155987 - 21156027
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  21155987 gagaaatgatatttgaacaaccattttttgacaacttttgt 21156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 39032679 - 39032635
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| |||||||||||   |||||||||||    
T  39032679 aaaagagaaatgatatttgtacaaccatttttgtacaacttttgt 39032635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 25127907 - 25127864
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  25127907 aaagagaaatgatatttgtacaaccattttgtaacaacttttgt 25127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 32729885 - 32729927
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  32729885 aaaagagaaatgatatttgtacaaccattttctgacaactttt 32729927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 1376364 - 1376404
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  1376364 gagaaattatatttgtacaaccattttctaacaacttttgt 1376404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 1384112 - 1384152
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  1384112 gagaaattatatttgtacaaccattttctaacaacttttgt 1384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 8778945 - 8778905
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  8778945 aagagaaatgatatttgtacaaccattttttaacaactttt 8778905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 9189017 - 9188977
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  9189017 aagagaaatgatatttgtacaaccattttttaacaactttt 9188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 15368897 - 15368853
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  15368897 aaagagaaatgatatttgaacatccattttgtaacaacttttgtt 15368853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 15666846 - 15666806
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  15666846 aagagaaatgatatttgtacaaccattttctgacaactttt 15666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 17551454 - 17551410
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  17551454 aaaagagaaatgatatttgaacaaccattttttgacaacttttgt 17551410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 26391358 - 26391318
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  26391358 aagagaaatgatatttgtacaaccattttttaacaactttt 26391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 3339573 - 3339530
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||||| ||||||||||| | |||||||||||    
T  3339573 aaagagaaatgatatttgtacaaccattttgtgacaacttttgt 3339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 16328763 - 16328724
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  16328763 aagagaaatgatatttgtacaaccattttataacaacttt 16328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 17835612 - 17835650
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  17835612 gagaaatgatatttgtacaacccttttctaacaactttt 17835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 3552222 - 3552185
Alignment:
Q  94 aaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  3552222 aaatgatatttgtacaaccattttttaacaacttttgt 3552185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 3049603 - 3049563
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  3049603 aagaaaaatgatatttgtacaatcattttctaacaactttt 3049563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 15318262 - 15318218
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttttgtt 132  Q
    |||||||||||||||||| ||| ||||||| | ||||||||||||    
T  15318262 aaagagaaatgatatttgaacatccattttgtgacaacttttgtt 15318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 19789149 - 19789109
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  19789149 aagagaaatgatatttgtacaaccattttattacaactttt 19789109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 27334854 - 27334898
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  27334854 aaaagagaaatgatatttgtacaactattttgtgacaacttttgt 27334898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 27395594 - 27395638
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  27395594 aaaagagaaatgatatttgtacaactattttgtgacaacttttgt 27395638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 28965913 - 28965873
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  28965913 aagagaaatgatatttgtacaaccattttgttacaactttt 28965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 29383555 - 29383595
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  29383555 aagagaaatgatatttgtacaaccactttctgacaactttt 29383595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 337117 - 337157
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  337117 agagaaatgatatttgtacaaccattttctgacaacttttg 337157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 366294 - 366333
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  366294 gagaaatgatatttgtacaaccatttt-taacaacttttgt 366333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 16665 - 16627
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  16665 gagaaatgatatttgtacaaccattttgtaacaactttt 16627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 56179 - 56217
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  56179 gagaaatgatatttgtacaaccattttgtaacaactttt 56217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 72240 - 72202
Alignment:
Q  91 gagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  72240 gagaaatgatatttgtacaaccattttgtaacaactttt 72202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 6592 - 6551
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  6592 agagaaatgatatttgaacaatcattttttaacaacttttgt 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 5415 - 5375
Alignment:
Q  88 aaagagaaatgatatttgcacaaccattttctaacaacttt 128  Q
    |||||| ||||||||||| |||||||||| |||||||||||    
T  5415 aaagagtaatgatatttgaacaaccatttgctaacaacttt 5375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 31366 - 31330
Alignment:
Q  94 aaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  31366 aaatgatatttggacaaccattttgtaacaacttttg 31330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 60467 - 60507
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  60467 aagagaaatgatatttgtacaaccattttattacaactttt 60507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 91946 - 91986
Alignment:
Q  89 aagagaaatgatatttgcacaaccattttctaacaactttt 129  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  91946 aagagaaataatatttgtacaaccactttctaacaactttt 91986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 72365 - 72405
Alignment:
Q  90 agagaaatgatatttgcacaaccattttctaacaacttttg 130  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  72365 agagaaatgatatttgtacaaccattttgcaacaacttttg 72405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 204520 - 204476
Alignment:
Q  87 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 131  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||    
T  204520 aaaagagaaatgatatttgtacatctattttctgacaacttttgt 204476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University