View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5790_low_1 (Length: 614)

Name: NF5790_low_1
Description: NF5790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5790_low_1
NF5790_low_1
[»] chr2 (69 HSPs)
chr2 (18-475)||(3100414-3100868)
chr2 (296-475)||(28572222-28572397)
chr2 (300-475)||(5211879-5212051)
chr2 (299-475)||(44534405-44534576)
chr2 (304-471)||(15859270-15859431)
chr2 (295-445)||(28301475-28301625)
chr2 (295-471)||(28526982-28527155)
chr2 (334-445)||(31545973-31546084)
chr2 (303-440)||(565135-565272)
chr2 (357-445)||(2882026-2882114)
chr2 (357-445)||(28108353-28108441)
chr2 (336-445)||(37247841-37247950)
chr2 (333-444)||(18181167-18181278)
chr2 (334-445)||(23685000-23685111)
chr2 (357-445)||(24775786-24775874)
chr2 (334-445)||(28925803-28925914)
chr2 (334-445)||(43077681-43077792)
chr2 (296-468)||(36396380-36396544)
chr2 (337-445)||(7649933-7650041)
chr2 (340-445)||(30757529-30757634)
chr2 (375-456)||(33602222-33602303)
chr2 (357-445)||(435056-435144)
chr2 (334-456)||(3123676-3123798)
chr2 (296-425)||(36155574-36155704)
chr2 (336-445)||(33755298-33755407)
chr2 (360-445)||(36103282-36103367)
chr2 (357-437)||(8550620-8550700)
chr2 (334-445)||(2048333-2048444)
chr2 (334-445)||(41436120-41436230)
chr2 (364-438)||(10818669-10818743)
chr2 (334-438)||(13375143-13375248)
chr2 (296-471)||(37528988-37529160)
chr2 (357-445)||(11726700-11726788)
chr2 (334-445)||(43950403-43950514)
chr2 (371-437)||(8031790-8031856)
chr2 (295-445)||(9724919-9725069)
chr2 (334-461)||(2756702-2756826)
chr2 (487-527)||(33602353-33602393)
chr2 (487-526)||(435205-435244)
chr2 (487-534)||(3100339-3100386)
chr2 (382-445)||(44194687-44194750)
chr2 (357-475)||(3199912-3200024)
chr2 (363-445)||(6213834-6213916)
chr2 (323-475)||(7213489-7213638)
chr2 (487-533)||(13375595-13375641)
chr2 (327-437)||(38280144-38280254)
chr2 (487-529)||(42881398-42881440)
chr2 (487-533)||(44534608-44534654)
chr2 (357-445)||(314468-314556)
chr2 (487-527)||(5212079-5212119)
chr2 (357-471)||(13222086-13222197)
chr2 (487-527)||(18181335-18181375)
chr2 (323-430)||(32556228-32556333)
chr2 (357-445)||(39095672-39095760)
chr2 (487-527)||(44194598-44194638)
chr2 (334-445)||(10069540-10069651)
chr2 (487-534)||(28572150-28572197)
chr2 (296-391)||(40965109-40965204)
chr2 (371-429)||(811358-811416)
chr2 (487-529)||(41436023-41436065)
chr2 (376-445)||(6972537-6972606)
chr2 (487-528)||(12872945-12872986)
chr2 (295-456)||(45464131-45464291)
chr2 (487-531)||(3123585-3123629)
chr2 (487-527)||(7650096-7650136)
chr2 (487-527)||(8385022-8385062)
chr2 (487-515)||(17154377-17154405)
chr2 (487-527)||(19009791-19009831)
chr2 (487-527)||(28526910-28526950)
[»] chr5 (63 HSPs)
chr5 (296-471)||(8692735-8692908)
chr5 (296-475)||(42575556-42575732)
chr5 (298-475)||(35646009-35646183)
chr5 (296-475)||(8369618-8369790)
chr5 (296-475)||(22582792-22582965)
chr5 (313-475)||(39008143-39008305)
chr5 (295-445)||(3725227-3725377)
chr5 (334-445)||(11099433-11099544)
chr5 (336-445)||(33988241-33988350)
chr5 (338-445)||(7613748-7613855)
chr5 (334-445)||(16283543-16283654)
chr5 (336-445)||(35334484-35334593)
chr5 (334-445)||(858376-858487)
chr5 (336-445)||(17242912-17243021)
chr5 (295-445)||(42211374-42211520)
chr5 (358-445)||(25814405-25814492)
chr5 (334-437)||(36469050-36469153)
chr5 (334-445)||(39183583-39183694)
chr5 (295-445)||(13135794-13135934)
chr5 (361-445)||(6610878-6610962)
chr5 (290-472)||(39060334-39060513)
chr5 (295-445)||(33012395-33012545)
chr5 (371-445)||(24231051-24231125)
chr5 (335-437)||(36446644-36446746)
chr5 (296-445)||(5357735-5357884)
chr5 (334-431)||(32539717-32539814)
chr5 (334-445)||(5147451-5147563)
chr5 (334-441)||(4576366-4576472)
chr5 (334-445)||(15254806-15254917)
chr5 (334-445)||(35585572-35585683)
chr5 (334-427)||(15814701-15814794)
chr5 (398-445)||(6735377-6735424)
chr5 (371-445)||(7311173-7311247)
chr5 (334-416)||(41184730-41184812)
chr5 (337-441)||(4475291-4475393)
chr5 (357-445)||(15898232-15898320)
chr5 (372-470)||(16926085-16926180)
chr5 (358-445)||(20189933-20190021)
chr5 (295-443)||(30437656-30437804)
chr5 (373-475)||(38978918-38979017)
chr5 (299-471)||(6629316-6629483)
chr5 (357-431)||(4412436-4412510)
chr5 (487-533)||(15814603-15814649)
chr5 (296-445)||(35988675-35988824)
chr5 (487-527)||(25814310-25814350)
chr5 (487-534)||(39060534-39060582)
chr5 (487-534)||(8369819-8369866)
chr5 (487-534)||(42575760-42575807)
chr5 (485-527)||(3725133-3725175)
chr5 (487-533)||(4044598-4044644)
chr5 (371-475)||(25108587-25108688)
chr5 (371-475)||(25111141-25111242)
chr5 (371-475)||(25167679-25167780)
chr5 (371-475)||(25170232-25170333)
chr5 (371-445)||(31090345-31090419)
chr5 (371-445)||(35666926-35667000)
chr5 (334-436)||(41594803-41594904)
chr5 (487-528)||(7613652-7613693)
chr5 (334-435)||(13422314-13422414)
chr5 (371-443)||(4194975-4195047)
chr5 (487-527)||(7276329-7276369)
chr5 (487-527)||(13422473-13422513)
chr5 (373-445)||(42818944-42819016)
[»] chr7 (66 HSPs)
chr7 (296-475)||(7425794-7425971)
chr7 (295-475)||(38181790-38181967)
chr7 (296-475)||(11616575-11616751)
chr7 (301-425)||(5083394-5083518)
chr7 (296-445)||(44604395-44604543)
chr7 (324-445)||(37490563-37490684)
chr7 (336-475)||(40038066-40038204)
chr7 (298-445)||(33584604-33584749)
chr7 (334-445)||(23058860-23058970)
chr7 (334-445)||(47454045-47454156)
chr7 (295-445)||(29257588-29257738)
chr7 (340-445)||(2846637-2846742)
chr7 (357-445)||(2842030-2842118)
chr7 (334-445)||(5724663-5724773)
chr7 (334-445)||(29434536-29434646)
chr7 (355-445)||(18235231-18235321)
chr7 (357-445)||(36117702-36117791)
chr7 (357-445)||(30463057-30463145)
chr7 (357-475)||(33774022-33774136)
chr7 (324-435)||(27234554-27234664)
chr7 (296-445)||(34064256-34064405)
chr7 (295-445)||(49100419-49100568)
chr7 (334-475)||(32775997-32776136)
chr7 (334-445)||(46095376-46095486)
chr7 (371-445)||(17266068-17266142)
chr7 (359-445)||(23703957-23704043)
chr7 (295-348)||(26938508-26938561)
chr7 (394-445)||(21387495-21387546)
chr7 (295-445)||(34963724-34963877)
chr7 (334-445)||(48981697-48981808)
chr7 (371-475)||(1643330-1643431)
chr7 (359-445)||(31581423-31581509)
chr7 (296-409)||(45890775-45890888)
chr7 (334-445)||(34001816-34001925)
chr7 (334-445)||(8150000-8150111)
chr7 (487-527)||(37157117-37157157)
chr7 (334-445)||(2849296-2849407)
chr7 (487-534)||(7426000-7426047)
chr7 (487-534)||(11616500-11616547)
chr7 (382-441)||(28923232-28923291)
chr7 (362-475)||(38589748-38589858)
chr7 (334-475)||(45218113-45218251)
chr7 (403-445)||(23186167-23186209)
chr7 (357-431)||(40803605-40803678)
chr7 (334-475)||(37264327-37264464)
chr7 (373-437)||(29997023-29997087)
chr7 (357-445)||(32971996-32972084)
chr7 (409-475)||(46288461-46288524)
chr7 (357-437)||(47238266-47238346)
chr7 (296-375)||(1643235-1643314)
chr7 (360-435)||(43780141-43780216)
chr7 (487-534)||(45890957-45891004)
chr7 (487-534)||(48981318-48981365)
chr7 (395-445)||(7456600-7456650)
chr7 (371-437)||(9658887-9658952)
chr7 (487-533)||(12308319-12308365)
chr7 (363-437)||(19688008-19688082)
chr7 (487-533)||(28923348-28923394)
chr7 (395-445)||(40590841-40590891)
chr7 (487-533)||(46288552-46288598)
chr7 (488-533)||(5724829-5724874)
chr7 (487-528)||(33774162-33774203)
chr7 (487-527)||(31581564-31581604)
chr7 (487-527)||(37491027-37491067)
chr7 (487-527)||(39498620-39498660)
chr7 (485-533)||(45480172-45480220)
[»] chr3 (61 HSPs)
chr3 (303-475)||(43639440-43639609)
chr3 (296-475)||(21296420-21296596)
chr3 (295-475)||(54122140-54122317)
chr3 (334-443)||(39866508-39866617)
chr3 (334-445)||(9017842-9017953)
chr3 (295-445)||(5245453-5245603)
chr3 (334-443)||(2868617-2868726)
chr3 (296-445)||(17776911-17777060)
chr3 (296-445)||(19078212-19078361)
chr3 (336-445)||(26134660-26134769)
chr3 (357-445)||(33994698-33994786)
chr3 (334-445)||(10855035-10855146)
chr3 (295-445)||(36097571-36097721)
chr3 (295-445)||(15280646-15280795)
chr3 (295-412)||(39364953-39365071)
chr3 (334-435)||(11251082-11251183)
chr3 (334-445)||(32827259-32827370)
chr3 (357-438)||(1772084-1772165)
chr3 (338-445)||(14756073-14756180)
chr3 (295-445)||(53876352-53876502)
chr3 (373-445)||(54458303-54458375)
chr3 (357-445)||(54845494-54845582)
chr3 (323-435)||(26142950-26143064)
chr3 (357-445)||(32023078-32023167)
chr3 (360-475)||(54493922-54494034)
chr3 (326-445)||(9218186-9218305)
chr3 (357-445)||(52325218-52325306)
chr3 (338-445)||(45392131-45392237)
chr3 (295-380)||(22202283-22202368)
chr3 (302-406)||(49408589-49408693)
chr3 (357-438)||(55415417-55415498)
chr3 (393-445)||(22202403-22202455)
chr3 (296-445)||(46785896-46786047)
chr3 (334-445)||(48744300-48744412)
chr3 (357-445)||(54783004-54783092)
chr3 (357-445)||(8706191-8706275)
chr3 (357-445)||(9058078-9058162)
chr3 (374-475)||(26832085-26832183)
chr3 (487-533)||(1772233-1772279)
chr3 (371-445)||(15082043-15082117)
chr3 (334-428)||(41031633-41031727)
chr3 (393-445)||(11529125-11529177)
chr3 (326-445)||(39329697-39329816)
chr3 (334-445)||(44218989-44219099)
chr3 (296-401)||(11528993-11529101)
chr3 (363-444)||(51636880-51636960)
chr3 (487-527)||(2868520-2868560)
chr3 (402-445)||(12744855-12744898)
chr3 (487-534)||(21296624-21296671)
chr3 (487-534)||(39365138-39365185)
chr3 (487-534)||(46786102-46786149)
chr3 (369-475)||(1923104-1923204)
chr3 (332-386)||(50736196-50736250)
chr3 (332-386)||(50776605-50776659)
chr3 (485-534)||(36097775-36097824)
chr3 (327-435)||(42547054-42547162)
chr3 (487-528)||(43640686-43640727)
chr3 (344-445)||(53754029-53754130)
chr3 (297-401)||(12745048-12745151)
chr3 (324-440)||(27152907-27153023)
chr3 (395-447)||(39144684-39144736)
[»] chr8 (68 HSPs)
chr8 (295-474)||(33190825-33191001)
chr8 (294-471)||(32241339-32241513)
chr8 (296-445)||(5392090-5392239)
chr8 (355-459)||(29730872-29730975)
chr8 (334-445)||(44790377-44790488)
chr8 (290-396)||(33925012-33925118)
chr8 (357-445)||(45425526-45425614)
chr8 (334-445)||(39171584-39171694)
chr8 (355-444)||(9014745-9014834)
chr8 (336-445)||(28802808-28802917)
chr8 (334-445)||(5962428-5962539)
chr8 (334-445)||(31410563-31410674)
chr8 (303-471)||(37219685-37219853)
chr8 (334-445)||(42412338-42412449)
chr8 (359-445)||(13084928-13085014)
chr8 (336-445)||(42558540-42558647)
chr8 (325-445)||(12957926-12958047)
chr8 (334-445)||(139063-139174)
chr8 (334-445)||(7258322-7258433)
chr8 (364-475)||(31132744-31132852)
chr8 (295-445)||(7042793-7042945)
chr8 (357-445)||(22324933-22325021)
chr8 (334-445)||(38252392-38252504)
chr8 (334-445)||(12653728-12653839)
chr8 (295-445)||(21587318-21587464)
chr8 (296-445)||(2195509-2195655)
chr8 (334-445)||(2349391-2349503)
chr8 (357-445)||(32967255-32967343)
chr8 (357-445)||(34133168-34133256)
chr8 (334-445)||(29615839-29615950)
chr8 (357-445)||(138679-138765)
chr8 (324-445)||(3384575-3384698)
chr8 (357-475)||(14689974-14690089)
chr8 (334-445)||(26677114-26677226)
chr8 (363-445)||(15559114-15559196)
chr8 (334-443)||(27973641-27973750)
chr8 (334-443)||(28030910-28031019)
chr8 (371-447)||(2119755-2119831)
chr8 (357-445)||(4274277-4274365)
chr8 (487-534)||(2119655-2119702)
chr8 (487-534)||(5391987-5392034)
chr8 (382-445)||(44615368-44615431)
chr8 (295-475)||(28791322-28791499)
chr8 (332-445)||(40077703-40077816)
chr8 (357-445)||(33743817-33743905)
chr8 (357-443)||(886652-886741)
chr8 (487-534)||(38252559-38252606)
chr8 (371-437)||(9734159-9734225)
chr8 (375-445)||(10728919-10728988)
chr8 (371-445)||(14748698-14748772)
chr8 (334-440)||(26570107-26570213)
chr8 (487-533)||(29567144-29567189)
chr8 (485-527)||(33826181-33826223)
chr8 (487-533)||(38908766-38908812)
chr8 (295-444)||(39416352-39416501)
chr8 (372-445)||(27868318-27868391)
chr8 (487-528)||(29615743-29615784)
chr8 (487-528)||(33191030-33191071)
chr8 (400-475)||(37459364-37459436)
chr8 (357-441)||(4480448-4480531)
chr8 (337-441)||(5423122-5423226)
chr8 (405-445)||(22490432-22490472)
chr8 (487-527)||(26570280-26570320)
chr8 (334-386)||(29638401-29638453)
chr8 (487-527)||(29730989-29731029)
chr8 (487-527)||(32241545-32241585)
chr8 (425-475)||(33925130-33925177)
chr8 (357-437)||(45420917-45420997)
[»] chr4 (87 HSPs)
chr4 (296-471)||(18849676-18849848)
chr4 (313-445)||(4360342-4360474)
chr4 (296-471)||(16493215-16493385)
chr4 (296-475)||(42024118-42024294)
chr4 (296-445)||(22872303-22872454)
chr4 (295-445)||(283393-283543)
chr4 (298-445)||(31862830-31862977)
chr4 (295-434)||(8295081-8295220)
chr4 (334-445)||(17237084-17237195)
chr4 (295-445)||(41710060-41710210)
chr4 (336-445)||(49306628-49306737)
chr4 (301-445)||(33047533-33047677)
chr4 (296-444)||(41436523-41436671)
chr4 (312-471)||(43421318-43421467)
chr4 (295-444)||(26185224-26185373)
chr4 (357-445)||(49812270-49812358)
chr4 (357-445)||(54729462-54729550)
chr4 (334-445)||(28974347-28974458)
chr4 (334-445)||(39979821-39979932)
chr4 (334-445)||(41203778-41203889)
chr4 (295-445)||(39976310-39976456)
chr4 (364-445)||(9093747-9093828)
chr4 (296-445)||(42185713-42185862)
chr4 (374-445)||(27977188-27977259)
chr4 (339-437)||(49448890-49448988)
chr4 (299-435)||(4357618-4357754)
chr4 (371-445)||(42544250-42544324)
chr4 (357-445)||(38977032-38977121)
chr4 (376-445)||(50328068-50328137)
chr4 (357-445)||(30568700-30568792)
chr4 (334-437)||(34021086-34021189)
chr4 (334-445)||(35909528-35909639)
chr4 (334-445)||(43334978-43335089)
chr4 (295-357)||(1796224-1796286)
chr4 (334-445)||(1825201-1825314)
chr4 (338-445)||(3686052-3686161)
chr4 (375-445)||(8065574-8065644)
chr4 (358-443)||(6506091-6506176)
chr4 (357-445)||(38160130-38160218)
chr4 (334-445)||(39258225-39258338)
chr4 (358-437)||(37309747-37309826)
chr4 (419-475)||(1796282-1796335)
chr4 (355-445)||(4727562-4727651)
chr4 (371-445)||(18509882-18509956)
chr4 (403-445)||(48740561-48740603)
chr4 (363-447)||(21240932-21241017)
chr4 (294-475)||(25149465-25149644)
chr4 (357-445)||(38319952-38320040)
chr4 (338-438)||(45290085-45290184)
chr4 (295-475)||(44633171-44633347)
chr4 (491-534)||(45289976-45290019)
chr4 (371-445)||(26799208-26799282)
chr4 (295-436)||(28330844-28330986)
chr4 (369-443)||(40881182-40881256)
chr4 (403-445)||(51527459-51527501)
chr4 (336-401)||(41371249-41371314)
chr4 (326-390)||(9778881-9778945)
chr4 (357-445)||(14009612-14009700)
chr4 (487-527)||(43335144-43335184)
chr4 (487-531)||(54729604-54729648)
chr4 (334-413)||(2906736-2906815)
chr4 (487-534)||(33047437-33047484)
chr4 (357-435)||(10309234-10309311)
chr4 (371-437)||(13529911-13529976)
chr4 (371-445)||(36047092-36047166)
chr4 (403-441)||(44020786-44020824)
chr4 (487-533)||(48740460-48740506)
chr4 (487-533)||(49812169-49812215)
chr4 (485-527)||(51572346-51572388)
chr4 (363-437)||(52677015-52677089)
chr4 (357-468)||(8759800-8759908)
chr4 (400-475)||(20964309-20964381)
chr4 (488-529)||(28974251-28974292)
chr4 (488-533)||(29644295-29644340)
chr4 (400-471)||(42132831-42132899)
chr4 (334-419)||(42670338-42670423)
chr4 (334-431)||(47787802-47787899)
chr4 (487-515)||(18873073-18873101)
chr4 (487-527)||(19688262-19688302)
chr4 (487-515)||(20964415-20964443)
chr4 (357-441)||(29136767-29136851)
chr4 (487-515)||(32323622-32323650)
chr4 (487-527)||(39979726-39979766)
chr4 (485-513)||(40293513-40293541)
chr4 (487-527)||(41436427-41436467)
chr4 (487-527)||(49448785-49448825)
chr4 (377-445)||(50714623-50714691)
[»] chr6 (27 HSPs)
chr6 (296-471)||(31265797-31265971)
chr6 (295-471)||(3604517-3604689)
chr6 (298-467)||(4238443-4238607)
chr6 (334-475)||(15081437-15081575)
chr6 (358-438)||(14306220-14306300)
chr6 (358-438)||(14312627-14312707)
chr6 (334-445)||(9755102-9755213)
chr6 (296-475)||(33921386-33921562)
chr6 (371-475)||(9354432-9354536)
chr6 (357-445)||(30063927-30064015)
chr6 (371-445)||(7301072-7301146)
chr6 (371-445)||(34915805-34915879)
chr6 (372-445)||(117120-117193)
chr6 (487-534)||(15081362-15081409)
chr6 (371-475)||(15371856-15371956)
chr6 (488-533)||(7359183-7359228)
chr6 (334-445)||(33109414-33109525)
chr6 (357-430)||(4611325-4611397)
chr6 (334-444)||(8569596-8569702)
chr6 (357-445)||(15321204-15321291)
chr6 (319-378)||(117974-118032)
chr6 (485-532)||(34915921-34915968)
chr6 (399-471)||(4552927-4552996)
chr6 (371-445)||(15355616-15355689)
chr6 (487-532)||(31265721-31265766)
chr6 (487-527)||(3604721-3604761)
chr6 (487-527)||(20383785-20383825)
[»] chr1 (78 HSPs)
chr1 (296-471)||(5442358-5442531)
chr1 (296-445)||(46536381-46536530)
chr1 (300-471)||(52432330-52432498)
chr1 (295-445)||(32348259-32348409)
chr1 (334-445)||(5040531-5040642)
chr1 (334-445)||(19532876-19532986)
chr1 (336-445)||(45889205-45889315)
chr1 (295-445)||(51749100-51749250)
chr1 (295-445)||(21304425-21304577)
chr1 (336-445)||(28839380-28839489)
chr1 (334-438)||(49944980-49945084)
chr1 (295-445)||(8773283-8773434)
chr1 (338-445)||(42926175-42926282)
chr1 (357-445)||(3555534-3555622)
chr1 (338-445)||(46496059-46496164)
chr1 (334-445)||(49494119-49494230)
chr1 (334-445)||(52830370-52830481)
chr1 (359-445)||(17342869-17342955)
chr1 (361-442)||(17724697-17724778)
chr1 (294-445)||(8327758-8327909)
chr1 (334-445)||(32587806-32587917)
chr1 (334-445)||(36467151-36467262)
chr1 (334-445)||(50267394-50267505)
chr1 (326-468)||(36784335-36784473)
chr1 (334-445)||(46880456-46880567)
chr1 (334-447)||(6787286-6787399)
chr1 (357-445)||(26756017-26756105)
chr1 (357-445)||(27391388-27391476)
chr1 (357-445)||(48242569-48242657)
chr1 (340-445)||(51848654-51848761)
chr1 (358-445)||(30749972-30750059)
chr1 (358-445)||(30771423-30771510)
chr1 (334-445)||(34813958-34814069)
chr1 (334-445)||(43895888-43895998)
chr1 (338-441)||(13500687-13500792)
chr1 (371-441)||(27831891-27831961)
chr1 (375-445)||(28277035-28277105)
chr1 (334-429)||(28908144-28908241)
chr1 (296-475)||(4466072-4466248)
chr1 (357-475)||(29756121-29756236)
chr1 (334-445)||(7785227-7785341)
chr1 (487-534)||(17342767-17342814)
chr1 (371-441)||(7787707-7787777)
chr1 (295-475)||(11425786-11425963)
chr1 (355-445)||(27932810-27932900)
chr1 (365-445)||(16040118-16040198)
chr1 (334-429)||(27698861-27698956)
chr1 (402-475)||(40754437-40754507)
chr1 (487-534)||(46536279-46536326)
chr1 (411-445)||(948620-948654)
chr1 (295-475)||(2219365-2219542)
chr1 (487-533)||(2219569-2219615)
chr1 (375-445)||(34877087-34877157)
chr1 (357-437)||(10370163-10370244)
chr1 (372-475)||(29225402-29225502)
chr1 (326-445)||(2571404-2571522)
chr1 (487-527)||(10370309-10370349)
chr1 (393-445)||(30903242-30903294)
chr1 (357-475)||(37541092-37541207)
chr1 (487-534)||(8773177-8773224)
chr1 (498-532)||(5442282-5442316)
chr1 (371-475)||(24131393-24131494)
chr1 (487-533)||(26583668-26583714)
chr1 (371-445)||(31798459-31798533)
chr1 (371-445)||(33149314-33149388)
chr1 (487-529)||(36784258-36784300)
chr1 (371-445)||(37925239-37925313)
chr1 (487-533)||(43895787-43895833)
chr1 (487-528)||(6784948-6784989)
chr1 (487-528)||(14358128-14358169)
chr1 (334-431)||(28706579-28706676)
chr1 (357-445)||(38664442-38664530)
chr1 (373-437)||(3160682-3160746)
chr1 (487-515)||(15290448-15290476)
chr1 (487-527)||(34877211-34877251)
chr1 (333-445)||(40061850-40061962)
chr1 (487-527)||(51049455-51049495)
chr1 (487-527)||(52830535-52830575)
[»] scaffold0006 (1 HSPs)
scaffold0006 (301-475)||(229837-230008)
[»] scaffold0007 (2 HSPs)
scaffold0007 (296-471)||(230274-230445)
scaffold0007 (487-529)||(230201-230243)
[»] scaffold0034 (1 HSPs)
scaffold0034 (307-445)||(98866-99004)
[»] scaffold0321 (1 HSPs)
scaffold0321 (357-444)||(9530-9617)
[»] scaffold0058 (1 HSPs)
scaffold0058 (334-445)||(14497-14608)
[»] scaffold0028 (1 HSPs)
scaffold0028 (340-445)||(26654-26752)
[»] scaffold0221 (1 HSPs)
scaffold0221 (403-445)||(8928-8970)
[»] scaffold0576 (1 HSPs)
scaffold0576 (371-445)||(606-679)
[»] scaffold0045 (1 HSPs)
scaffold0045 (403-445)||(26363-26405)
[»] scaffold0020 (1 HSPs)
scaffold0020 (371-445)||(171267-171341)


Alignment Details
Target: chr2 (Bit Score: 335; Significance: 0; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 18 - 475
Target Start/End: Complemental strand, 3100868 - 3100414
Alignment:
Q  18 aaagggacaaattaacaagccttctccccatctctttccatagaggcaggcttgttgatagcttgtcccgcatttcaaaatcccttccttttatgtcaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3100868 aaagggacaaattaacaagccttctccccatctctttccattgaggcaggcttgttaatagcttgtcccgcatttcaaaatcccttccttttatgtcaaa 3100769  T
Q  118 taaaggacagcacaacgtgatagttaacannnnnnncaatagaatatgaaagtaaagtttttgccagaaatgaattaaagagacatctcaatctcatact 217  Q
    |||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3100768 taaaggacagaacaacgtgatagttaacatttttttcaatagaatatgaaagtaaagtttttgccagaaatgaattaaagagacatctcaatctcatact 3100669  T
Q  218 taattcatatttactaattattactgcataatgtatcaatactgtccactagaagcaccactaatgaaaaacacaagatactccctccgtcccgaattag 317  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||   |||||||||||||||||||||||||||| | | |||||||| ||||||    
T  3100668 taattcatatttactaattattactgcataatgtatgaatagtgtccaccgaaagcaccactaatgaaaaacacaagatatttcgtccgtcccaaattag 3100569  T
Q  318 ctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctc 417  Q
     ||| ||||||||||||||| ||| |||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  3100568 ttgagccattttttcttttcgcacgtattaaaacaaatatataaatgaaggagagagaaaaatgattttaagtgatcttgttaagtattgctgcattctc 3100469  T
Q  418 cactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  3100468 cactatcataaatgcaaagtggaata---tattaaattggaagttgtgaaagtagtat 3100414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 296 - 475
Target Start/End: Complemental strand, 28572397 - 28572222
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| | || | ||||||| ||||| |||| |||||| ||||||||| |||    
T  28572397 tactccctccgtcccgaattagctgagccattttttcatttcacacatattaagacaaatgtataaataaaggagagag-aaaatgattttaagtgctct 28572299  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| ||||||||||||||||||||||||||||||||| || ||||   |||| ||||||||||||||||||||||||    
T  28572298 tgttaagtattggtgcattctccactatcataaatgcaaaatgaaata---tattgaattggaagttgtgaaagtagtat 28572222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 5211879 - 5212051
Alignment:
Q  300 ccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtt 399  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||| || | ||||||||||| | || ||||||| |||||||||| |||||||    
T  5211879 ccctccgtcccgaattagccgagccattttttcatttcacacatattaaaacaaatgtataaatgaagaagagggaaaaatagttttaagtgctcttgtt 5211978  T
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || |||| ||||||| || |||||||||||||||||||||||||   |||| ||||| ||||||||||||||||||    
T  5211979 aagtatttgtgcattatcaactatcataaatgcaaagtggaata---tattgaattgaaagttgtgaaagtagtat 5212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 299 - 475
Target Start/End: Original strand, 44534405 - 44534576
Alignment:
Q  299 tccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgt 398  Q
    ||||||| ||||||||||||||| ||||||||||||||||||  |||||| | || | ||||||||||||| ||| ||||||| |||||| || ||||||    
T  44534405 tccctccatcccgaattagctgagccattttttcttttcaca--tattaagacaaatgtataaatgaaggacagaaaaaaatgattttaaatgttcttgt 44534502  T
Q  399 taactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||   |||| ||||||||| ||||||| ||||||    
T  44534503 taagtattggtacattctccactatcataaatgcaaagtggaata---tattgaattggaagctgtgaaattagtat 44534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 304 - 471
Target Start/End: Original strand, 15859270 - 15859431
Alignment:
Q  304 ccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaact 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||||||| |||||||||  | ||||||| |    
T  15859270 ccgtcccgaattagctgaaccattttttcttttcacacatattaagacaaatatataaatgaaggagagagaaaaatagttttaagtacttttgttaagt 15859369  T
Q  404 attggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||| |||||||||||    |||||||||||||| ||||   |||| |||| |||||||||||||||    
T  15859370 attggggcattctccac---aataaatgcaaagtgaaata---tattgaattagaagttgtgaaagta 15859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 28301625 - 28301475
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||| |||| || | ||||||  ||   ||||| ||||||| | || | ||||||||||||||||||||||||||||||||||| ||    
T  28301625 atactccctccgtcccggattaactaagccatttgctcaaatcacatatattaagacaaatgtataaatgaaggaaagagaaaaatggttttaagtgctc 28301526  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| ||||||    
T  28301525 ttgttaagtattggtctattctccactatcataaatgcaaagtgaaatata 28301475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 295 - 471
Target Start/End: Complemental strand, 28527155 - 28526982
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||| |||||||||||||| ||||  |||||  || ||||||||||||||| | || | ||||||||||||| | | ||||||||||||||||| ||    
T  28527155 atactccatccgtcccgaattaactgagtcatttgctcatttcacacatattaagaaaaatgtataaatgaaggagaaaaaaaaatggttttaagtgctc 28527056  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||||| |||| ||||||||| ||||| |||| ||| |||||||| ||   |||| ||||||||||||||||||||    
T  28527055 ttgttaagtattcgtgcattcttcactaccatatatgtaaagtggacta---tattgaattggaagttgtgaaagta 28526982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 31545973 - 31546084
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||| ||||||||| || | ||||||||||||| |  ||||| |||||||||||||||||||||| ||||| |||| |||||||||||| |||||||    
T  31545973 tttcacatatattaaaaaaaatgtataaatgaaggagaaggaaaagtggttttaagtgatcttgttaaatattgatgcactctccactatcacaaatgca 31546072  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  31546073 aagtggaatata 31546084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 565272 - 565135
Alignment:
Q  303 tccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaac 402  Q
    ||||||||| |||| |||| ||||||  |  ||| |||||| |||| | || | |||| |||||||| | ||||||||| ||||||||| |||||||||     
T  565272 tccgtcccggattaactgagccatttgcttattttacacattttaagaaaaatgtatatatgaaggagaaagaaaaatgattttaagtgttcttgttaag 565173  T
Q  403 tattggtgcattctccactatcataaatgcaaagtgga 440  Q
    ||||||||||||||||||||||||||||||||||||||    
T  565172 tattggtgcattctccactatcataaatgcaaagtgga 565135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 2882114 - 2882026
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || | ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  2882114 tataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaagtgaaatata 2882026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 28108353 - 28108441
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  28108353 tataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcatacatgtaaagtggaatata 28108441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 37247841 - 37247950
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||| ||||||| | || | |||||| |||||||||| |||||| |||||||||| ||||||||| |||||||  ||||||||||||||||||||||||    
T  37247841 tcacatatattaagacaaatgtataaaagaaggaaagaaaaaaatagttttaagtgctcttgttaagtattggtctattctccactatcataaatgcaaa 37247940  T
Q  436 gtggaatata 445  Q
    ||| ||||||    
T  37247941 gtgaaatata 37247950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 333 - 444
Target Start/End: Original strand, 18181167 - 18181278
Alignment:
Q  333 ttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    |||||||||| ||||| | || | ||||| |||  || ||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||    
T  18181167 ttttcacacagattaagaaaagtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  433 aaagtggaatat 444  Q
    ||||| ||||||    
T  18181267 aaagtagaatat 18181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 23685111 - 23685000
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||| |||||||| | || | ||||||| ||||| |||||||| | |||||||||| | ||||||| |||| ||||||||||||||||||||||||||    
T  23685111 tttcacgcatattaagaaaaatgtataaataaaggagagagaaaattagttttaagtgtttttgttaagtattagtgcattctccactatcataaatgca 23685012  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  23685011 aagtgaaatata 23685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 24775786 - 24775874
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||||||||||  |||||||||  |||||||| |||||||| |||||||||||||||||||| |||||| ||||||    
T  24775786 tataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgtattctccactatcataaatgtaaagtgaaatata 24775874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 28925803 - 28925914
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||| ||||| |||||||||| ||||||||||  |||||||| ||||| |||||||||||||||||||| || |    
T  28925803 tttcacacgtattaagaaaaatgtataaataaaggagagagaaaaatagttttaagtgcacttgttaagtattgatgcattctccactatcataattgta 28925902  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  28925903 aagtgaaatata 28925914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 43077681 - 43077792
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||||| || |||||||||| ||||||| ||  ||||||||||||||||||||| |||||| ||||||||| |    
T  43077681 tttcacacgtattaagacaaatgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcattttccactgtcataaatgta 43077780  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  43077781 aagtgaaatata 43077792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 468
Target Start/End: Original strand, 36396380 - 36396544
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||| ||   |||     | ||||||| ||| | ||||||||||||||||||||| |||    
T  36396380 tactccctccgttccgaattagctgagtcattttttctttttacatatgacaaa-----tgtataaataaagtatagagaaaaatggttttaagtgctct 36396474  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaa 468  Q
    || | | |||| |||||||||||||| |||||||||||||||  ||||   |||||||||  |||||||||||    
T  36396475 tgatgagtattagtgcattctccactgtcataaatgcaaagtataata---tattaaattaaaagttgtgaaa 36396544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 445
Target Start/End: Original strand, 7649933 - 7650041
Alignment:
Q  337 cacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    |||||||||||| || || | ||||||||||||| || | |||||  ||||||||| ||||||||| || || |||||||||||||||||||||||||||    
T  7649933 cacacatattaataaaaaatgtataaatgaaggagagcgcaaaata-ttttaagtgctcttgttaagtactgatgcattctccactatcataaatgcaaa 7650031  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  7650032 gtggaatata 7650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 30757529 - 30757634
Alignment:
Q  340 acatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtgg 439  Q
    ||||||||| | || | ||||||||||||| |||||||||| ||||||||||  |||||||| ||||  |||||| |||||||||||||||| ||| |||    
T  30757529 acatattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattaatgcattttccactatcataaatgtaaattgg 30757628  T
Q  440 aatata 445  Q
    ||||||    
T  30757629 aatata 30757634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 456
Target Start/End: Original strand, 33602222 - 33602303
Alignment:
Q  375 aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||||||||||||||| ||||||||  |||| ||||||||| ||| |||||||||||||||||||||||| |||| |||||    
T  33602222 aaaaatggttttaagtgctcttgttatgtattagtgcattcttcaccatcataaatgcaaagtggaatataatattgaattg 33602303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 435056 - 435144
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || ||| |||||| ||||||||||  |||||||| |||| |||||||||||||||||||||||| |||||| ||||||    
T  435056 tataaatgaaagagagacaaaaatagttttaagtgcacttgttaaatattagtgcattctccactatcataaatgtaaagtgaaatata 435144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 3123798 - 3123676
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||| ||||| | ||||||||||  ||||||||| | |  |||| |||||||||||||| ||||||||||||| ||    
T  3123798 tttcacacatattaagaaaaatgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattcttcactatcataaataca 3123699  T
Q  434 aagtggaatatactattaaattg 456  Q
    || ||||||||| |||| |||||    
T  3123698 aaatggaatatagtattgaattg 3123676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 425
Target Start/End: Complemental strand, 36155704 - 36155574
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataac-tatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||| ||||||||||| |||| | ||||  ||   ||||||||||||| ||||  | ||||||||||||| ||| ||||||| ||||||||| ||    
T  36155704 tactccctctgtcccgaattaactgagctatttgctcagatcacacatattaagataaaatgtataaatgaaggagagaaaaaaatgattttaagtgctc 36155605  T
Q  395 ttgttaactattggtgcattctccactatca 425  Q
    ||||||| |||||||| |||||||| |||||    
T  36155604 ttgttaagtattggtgtattctccaatatca 36155574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 33755407 - 33755298
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    |||||| |||||| | || | ||||||||||||| ||||||||||| ||||||||| | ||||||| |||||||  |||||   ||||||||||||||||    
T  33755407 tcacacgtattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttattgttaagtattggtctattcttttctatcataaatgcaaa 33755308  T
Q  436 gtggaatata 445  Q
     |||||||||    
T  33755307 atggaatata 33755298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 36103282 - 36103367
Alignment:
Q  360 aaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| ||| | |||||||||||||||||| |||  ||| |||||||||    
T  36103282 aaatgaaggagagagaaaaatgattttaagtgttcttgttaagtatcgatgcattctccactatcatgaatataaaatggaatata 36103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 8550620 - 8550700
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||| |||| || |||||||| |||||||||||| |||||| || |||| |||||||||||| |||||||||||||||||    
T  8550620 tataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctccattatcataaatgcaaagt 8550700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 2048444 - 2048333
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || | ||||| |||| || |||||||||||||| | |||| |||| | |||||||||||||||||    |||||||||||||    
T  2048444 tttcacacttattaaaaaaaatgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatcataaatgca 2048345  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  2048344 aagtagaatata 2048333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 41436230 - 41436120
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||  | |||||||| |  ||||||||| | ||||||| ||||| || ||||| ||||||||||||||||    
T  41436230 tttcacacatattaagaaaaatgtataaatgaattagagagaaaa-taattttaagtgtttttgttaagtattgatgtattcttcactatcataaatgca 41436132  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  41436131 aagtggaatata 41436120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 364 - 438
Target Start/End: Complemental strand, 10818743 - 10818669
Alignment:
Q  364 gaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtg 438  Q
    |||||| ||||||||||||||||| |   ||||||||| ||||||||||||||| | ||||||||||||||||||    
T  10818743 gaaggagagagaaaaatggttttatgcactcttgttaagtattggtgcattctctagtatcataaatgcaaagtg 10818669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 13375143 - 13375248
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaac-tattggtgcattctccactatcataaatgc 432  Q
    |||||||| |||||| | || | ||||||||||||| ||||| ||||  |||||||||   |||||||  |||||||||||||||||||||||||||||     
T  13375143 tttcacacgtattaagaaaaatgtataaatgaaggagagagataaataattttaagtgcagttgttaaggtattggtgcattctccactatcataaatgt 13375242  T
Q  433 aaagtg 438  Q
    ||||||    
T  13375243 aaagtg 13375248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 471
Target Start/End: Original strand, 37528988 - 37529160
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||| | ||| ||||  ||||| ||| |||||||| |||||||| || ||||| | | ||||| |||||||||||||||| ||||   |    
T  37528988 tactccctccgtcccaatttaactgagtcatttgttcatttcacacttattaaaaaaaatatattagtaaaggatagagaaaaatggttttgagtgtctt 37529087  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||| |||||||  ||| | |  ||||||||||| ||||| |||||    ||| |||||||||| |||||||||    
T  37529088 tgttaagtattggtctatttttctttatcataaatgtaaagtagaata---aattgaattggaagtggtgaaagta 37529160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 11726700 - 11726788
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| |||||||| |||||||||| |||||||||  | ||||||  ||||  |||||||||||||||||||| |||||||| |||||||    
T  11726700 tatagatgaaggagagagaaaaatagttttaagtactattgttatgtattaatgcattctccactatcataattgcaaagtagaatata 11726788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 43950403 - 43950514
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || | ||||| |||| || |||||||||| ||||||| || | ||||||| ||||| || ||| |||| || ||||||||||    
T  43950403 tttcacacttattaaaaaaaatgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccattaacataaatgca 43950502  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  43950503 aagtagaatata 43950514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 8031856 - 8031790
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| ||||| ||| ||||||||| ||||| || |||||||| |||||||||||||||||    
T  8031856 agagaaaaatgattttatgtgttcttgttaagtattgatgtattctccattatcataaatgcaaagt 8031790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 9725069 - 9724919
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||  | |||  |||  |||||| || ||||||||||||||| | || | |||||||||| || ||||| ||||| |||| |||| |     
T  9725069 atactccctccgtcctaatttaattgagtcattttctcatttcacacatattaagaaaagtgtataaatgaaagagagagagaaatgattttgagtgctt 9724970  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    || | || |||||||||||||| |  ||||||||||| ||||| |||||||    
T  9724969 ttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatata 9724919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 2756826 - 2756702
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||| ||||||| | ||||||||||  ||||||||| |||||| || |||| |||||||  ||| ||||||||||| |    
T  2756826 tttcacacttattaagaaaaatgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatttaccattatcataaatgta 2756727  T
Q  434 aagtggaatatactattaaattggaagt 461  Q
    |||| |||||   |||||||||||||||    
T  2756726 aagtagaata---tattaaattggaagt 2756702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 33602353 - 33602393
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  33602353 aattaatattgtattgaaaagtgaaatagatcagttatttt 33602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 435205 - 435244
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattt 526  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  435205 aattaatattgtattgaaaagtgaaatagttcagtcattt 435244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 3100386 - 3100339
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||    
T  3100386 aattaatattgtattgaaaagtgaaatgactcagttattttgagacac 3100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 44194750 - 44194687
Alignment:
Q  382 gttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||| |||||||||  || |||||||||||  ||||||||||||||||||||||||||    
T  44194750 gttttatgtgttcttgttaagcatcggtgcattctcgcctatcataaatgcaaagtggaatata 44194687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 475
Target Start/End: Complemental strand, 3200024 - 3199912
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    |||||||||| || |||||||||||||||| ||||   |||||||||||| ||||||| |    |||||||||||||||||  ||||   |||| |||||    
T  3200024 tataaatgaaagagagagaaaaatggttttgagtgtcattgttaactatttgtgcatttt---ttatcataaatgcaaagtataata---tattgaattg 3199931  T
Q  457 gaagttgtgaaagtagtat 475  Q
    | ||| |||||||||||||    
T  3199930 ggagtggtgaaagtagtat 3199912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 6213834 - 6213916
Alignment:
Q  363 tgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| |||||||||||||| ||||||||| ||| || || ||||| | ||||  ||| ||||||||||||||||| |||||||    
T  6213834 tgaatgaaagagaaaaatgattttaagtgttctcgtcaagtattgcttcatttaccattatcataaatgcaaagtagaatata 6213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 475
Target Start/End: Complemental strand, 7213638 - 7213489
Alignment:
Q  323 ccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccacta 422  Q
    ||||||| || ||||||||| ||||| | || | ||||||||||  | ||||||||||| |||| ||||   || | || |||||||||||||| |  ||    
T  7213638 ccattttctcatttcacacagattaagaaaaatgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatattggtgcattcttcttta 7213539  T
Q  423 tcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    | ||||||| |||||||||||   |||| |||||  |||||||||||||||||    
T  7213538 ttataaatgtaaagtggaata---tattgaattgagagttgtgaaagtagtat 7213489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 13375595 - 13375641
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  13375595 aattaatattgtattgaaaagtgaaatgactcagttattttgagaca 13375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 437
Target Start/End: Original strand, 38280144 - 38280254
Alignment:
Q  327 tttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcat 426  Q
    |||||| ||||||||||||||| | || | |||||| |||  | |||||||||||||||| ||||   || |||| |||||||||||||| |  ||||||    
T  38280144 tttttcatttcacacatattaagaaaaatgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcat 38280243  T
Q  427 aaatgcaaagt 437  Q
    ||||| |||||    
T  38280244 aaatgtaaagt 38280254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 529
Target Start/End: Original strand, 42881398 - 42881440
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttga 529  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  42881398 aattaatattgtattgaaaagtgaaatgattcagttattttga 42881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 44534608 - 44534654
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  44534608 aattaatattgtattgaaaagtgaaatgactcagttattttgagaca 44534654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 314556 - 314468
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| || |||| ||||||||||| ||||  ||| | |||||||| |||||||| |  ||||||||||||||||| |||||||    
T  314556 tataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgcattcttctttatcataaatgcaaagtagaatata 314468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 5212079 - 5212119
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  5212079 aattaatattgtattgaaaagtgaaataactcagttatttt 5212119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 471
Target Start/End: Complemental strand, 13222197 - 13222086
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||| |||| || |||||||||||| ||| ||||  ||| | ||||||||||| ||||| |  |||||||||||||||||  ||||   |||| |||||    
T  13222197 tataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgtattcttctttatcataaatgcaaagtaaaata---tattgaattg 13222101  T
Q  457 gaagttgtgaaagta 471  Q
    ||||| |||||||||    
T  13222100 gaagtggtgaaagta 13222086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 18181335 - 18181375
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  18181335 aattaatattgtattgaaaagtgaaatgggtcagttatttt 18181375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 32556333 - 32556228
Alignment:
Q  323 ccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccacta 422  Q
    |||||| ||| ||||||||||||||| | || | ||||| |||| ||  |||||||||||||||||||   ||||| || ||||||||||||| |||  |    
T  32556333 ccatttgttcatttcacacatattaagaaaagtgtataagtgaaaga--gagaaaaatggttttaagtatccttgtcaagtattggtgcattcaccatca 32556236  T
Q  423 tcataaat 430  Q
    ||||||||    
T  32556235 tcataaat 32556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 39095760 - 39095672
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | ||| ||||||  ||| ||||| ||| |  || ||||| | ||||||||| |||||||||||||||||||||||||    
T  39095760 tataaatgaagtagagaaaaaaatcatttgaagtgttctcgagaagtattgatacattctccattatcataaatgcaaagtggaatata 39095672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 44194638 - 44194598
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  44194638 aattaatattgtattgaaaagtgaaatgattcagttatttt 44194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 10069540 - 10069651
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||  ||||| | || ||||||| |||| || ||| ||||||| ||||||||  | |||| || |||| |||||||  ||| |||||||||||||    
T  10069540 tttcacactcattaagaaaaatatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttaccattatcataaatgca 10069639  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  10069640 aagtcgaatata 10069651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 28572197 - 28572150
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||    
T  28572197 aattaatattgtattgaaaagtgaaatgactcagttattttgggacac 28572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 391
Target Start/End: Complemental strand, 40965204 - 40965109
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtg 391  Q
    |||||||||||||||| |||| || | |||   | || |||||||| |||||| | || | ||||||||||||| |||||||||| ||||||||||    
T  40965204 tactccctccgtcccggattaactaagccaaaatctcatttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtg 40965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 811416 - 811358
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaa 429  Q
    ||||||| |||||||| | || ||||||||||||||||||||||  ||| |||||||||    
T  811416 agagaaacatggttttgaatgttcttgttaactattggtgcatttaccaatatcataaa 811358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 41436065 - 41436023
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttga 529  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  41436065 aattaatattgtattgaaaagtgaaatgactcagttattttga 41436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 6972537 - 6972606
Alignment:
Q  376 aaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| ||||  ||| | ||||||| ||||||||| |  ||||||||||||||||| |||||||    
T  6972537 aaaatggttttgagtgcccttatcaactatttgtgcattcttctttatcataaatgcaaagtagaatata 6972606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Complemental strand, 12872986 - 12872945
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  12872986 aattaatattgaattgaaaagtgaaatatgtcagttattttg 12872945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 456
Target Start/End: Original strand, 45464131 - 45464291
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||| ||||||||| |||||  |||  |||||  || ||||||||||||||| | || | ||||| |||| || ||| ||||||| |||||| || ||    
T  45464131 atactctctccgtcccaaattaagtgagtcatttgctcatttcacacatattaagaaaaatgtataagtgaatgagagaaaaaaatgattttaaatgctc 45464230  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||||| | || |||||||   || |||||| |||||||| | ||| ||| ||||||||||    
T  45464231 ttgttaagtgtttgtgcattaatcattatcattaatgcaaaatagaagata-tattaaattg 45464291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 3123629 - 3123585
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgaga 531  Q
    |||||||||||||||| ||||||||||   |||||||||||||||    
T  3123629 aattaatattgtattggaaagtgaaatgactcagttattttgaga 3123585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 7650096 - 7650136
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  7650096 aattaatattgtatttaaaagtgaaatgattcagttatttt 7650136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 8385062 - 8385022
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  8385062 aattaatattgtattgaaaagtgaaataagtcaattatttt 8385022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 515
Target Start/End: Original strand, 17154377 - 17154405
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatag 515  Q
    |||||||||||||||||||||||||||||    
T  17154377 aattaatattgtattgaaaagtgaaatag 17154405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 19009831 - 19009791
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||| | ||| |||||||    
T  19009831 aattaatattgtattgaaaagtgaaattgatcaattatttt 19009791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 28526950 - 28526910
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||| ||||||||||||||||  ||||||||||||    
T  28526950 aattaatattatattgaaaagtgaaatgattcagttatttt 28526910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 296 - 471
Target Start/End: Original strand, 8692735 - 8692908
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccatttt-ttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | || |||||||||||||||  |||||||||||||||||||| ||    
T  8692735 tactccctccgtcccgaattagctgagccatttttttcttttcacacatattaagacaaatatataaatgaaggagggagaaaaatggttttaagtgttc 8692834  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||||| ||||||||||||||||||||||||||||||||| || ||||   |||||||||||||||||||||||||    
T  8692835 ttgttaagtattggtgcattctccactatcataaatgcaaaatgaaata---tattaaattggaagttgtgaaagta 8692908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 42575556 - 42575732
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| | || | |||||||||| || ||||||||||||||||||||| |||    
T  42575556 tactccctccgtcccgaattagctgagccattttttcatttcacacatattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgctct 42575655  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || ||| |||||||| ||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  42575656 tggtaagtattggtgtattctccactatcataaatgcaaagtggaata---tattgaattggaagttgtgaaagtagtat 42575732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 298 - 475
Target Start/End: Original strand, 35646009 - 35646183
Alignment:
Q  298 ctccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttg 397  Q
    |||||| |||| | ||||||||||  ||||||||||||||||||||||||| | || |||||||||||| || ||||||||||| |||||||||||||||    
T  35646009 ctcccttcgtctccaattagctgagtcattttttcttttcacacatattaagacaaatatataaatgaatgagagagaaaaatgattttaagtgatcttg 35646108  T
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||| |||||||||||||||||||||||||||||||||||||||||   |||| |||| |||||||||||||||||||    
T  35646109 ttaagtattggtgcattctccactatcataaatgcaaagtggaata---tattgaattagaagttgtgaaagtagtat 35646183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 8369618 - 8369790
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||||| | || | ||||    ||||| |||||||||| ||||||| || |||    
T  8369618 tactccctccgtcccgaattagctgaaccattttttcatttcacatgtattaagacaaatgtata----aaggagagagaaaaattgttttaaatgctct 8369713  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||   |||| ||||| ||||||||||||||||||    
T  8369714 tgttaagtattggtgcattctccactatcataaatgcaaagtggaata---tattgaattgaaagttgtgaaagtagtat 8369790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 22582792 - 22582965
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||| ||||| |||||||||| ||||||||| |||  ||||||||||| | || ||||||||||||  | ||||||||||| ||||||||| |||    
T  22582792 tactccctcagtcccaaattagctgagccatttttttttt--acacatattaagacaaatatataaatgaataagagagaaaaatgattttaagtgctct 22582889  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| || || |||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||||    
T  22582890 tgttaagtaatgatgcattctccactatcataaatgcaaagtggaaa----tattgaattggaagttgtgaaagtagtat 22582965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 313 - 475
Target Start/End: Complemental strand, 39008305 - 39008143
Alignment:
Q  313 attagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgca 412  Q
    ||||||||| |||||||||| ||| ||||||||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||    
T  39008305 attagctgagccattttttcattttacacatattaaaacaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggttca 39008206  T
Q  413 ttctcc----actatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||    ||||||||||||| |||||| ||||   |||| ||||||||||| ||||||||||||    
T  39008205 ttctccactaactatcataaatgtaaagtgaaata---tattgaattggaagtt-tgaaagtagtat 39008143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 3725377 - 3725227
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||  || ||||  ||| |||| || || ||||||||||||||| | || | |||||| |||||| ||||||||||||||||||||| |     
T  3725377 atactccctccgtttcggattaattgagccatattctcatttcacacatattaagaaaaatgtataaaggaaggagagagaaaaatggttttaagtgcta 3725278  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  3725277 ttgttaagtattggtgcattctccactatcataaatgcatagtggaatata 3725227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 11099433 - 11099544
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||| || |||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||| ||    
T  11099433 tttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataaataca 11099532  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  11099533 aagtggaatata 11099544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 33988350 - 33988241
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||||||||| | || | ||||||||||||| | ||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||||| |||    
T  33988350 tcacacatattaagacaaatgtataaatgaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtgtattctccactatcataaatgtaaa 33988251  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  33988250 gtggaatata 33988241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 7613855 - 7613748
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| | || | ||||||| |||||||||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||| |||||    
T  7613855 acacatattaagaaaaatgtataaattaaggaaagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaatgtaaagt 7613756  T
Q  438 ggaatata 445  Q
    | ||||||    
T  7613755 gaaatata 7613748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 16283543 - 16283654
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||  |||||||| || | ||||||||||||| ||| |||||||||||||| |||| ||||||  ||||||||||||||| |||||||||||||||    
T  16283543 tttcacatgtattaaaaaaaatgtataaatgaaggagagaaaaaaatggttttaaatgattttgttatgtattggtgcattctcaactatcataaatgca 16283642  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  16283643 aagtggaatata 16283654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 35334484 - 35334593
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||| ||||||| | || ||||||||||||||| |||||||||| |||||||||| |||| |||| |||| ||  ||||||||||||||||||||||||    
T  35334484 tcacagatattaagacaaatatataaatgaaggagagagaaaaatagttttaagtgctcttattaagtatttgtctattctccactatcataaatgcaaa 35334583  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  35334584 gtggaatata 35334593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 858487 - 858376
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||| ||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||    
T  858487 tttcacacatattaagaaaaatgtataaataaaggagagaaaaaaatggttttaagttatcttgttaaatattggtacattctccattatcataaatgca 858388  T
Q  434 aagtggaatata 445  Q
    || || ||||||    
T  858387 aaatgaaatata 858376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 17242912 - 17243021
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||||||||| | || | |||||||||| || |||||||||||||||| |||  ||||||||| |||||||  |||||| |||||||||||||||||    
T  17242912 tcacacatattaagacaaatgtataaatgaatgagagagaaaaatggtttttagtactcttgttaagtattggtctattctctactatcataaatgcaaa 17243011  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  17243012 gtggaatata 17243021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 42211520 - 42211374
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||| ||||| ||||| | ||  |||||  || ||||||||||||||||| || | ||||||||||||   |||||||||||||||||||| ||    
T  42211520 atactccctctgtcccaaattaaccgagtcatttgctcatttcacacatattaaaaaaaatgtataaatgaaggtgggagaaaaatggttttaagtgctc 42211421  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||    || ||| ||||||||||||||||||||||| ||||||    
T  42211420 ttgttaagta----tgtattttccactatcataaatgcaaagtgaaatata 42211374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 25814492 - 25814405
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||| |||||||||| ||||||||||  |||||||| ||||||| |||| |||||||||||||||| |||||| ||||||    
T  25814492 ataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtacattatccactatcataaatgtaaagtgaaatata 25814405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 437
Target Start/End: Original strand, 36469050 - 36469153
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||||| | | ||||||| || |||||| | ||||||  |||||||||||||||||||||||||||||||    
T  36469050 tttcacacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtattggtgcattctccactatcataaatgca 36469149  T
Q  434 aagt 437  Q
    ||||    
T  36469150 aagt 36469153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 39183583 - 39183694
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||  | ||| ||||||| ||||||||| | | ||||| ||||| || ||||||||||||||||||||||    
T  39183583 tttcacacatattaagaaaaatgtataaatgaaaaagagataaaaatgattttaagtgctttcgttaagtattgatgaattctccactatcataaatgca 39183682  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  39183683 aagtggaatata 39183694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 13135934 - 13135794
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||| ||||||||| ||||| | ||  ||||| ||| |||||||| |||||| | |||| ||||||||||||| |||||||  |||||||||||| |     
T  13135934 atactcactccgtcccaaattaacagagtcatttgttcatttcacacgtattaagaaaactgtataaatgaaggagagagaaa--tggttttaagtgttt 13135837  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||        |||||||||||||||||||||||||||||||||||||||    
T  13135836 ttgt--------ggtgcattctccactatcataaatgcaaagtggaatata 13135794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 6610962 - 6610878
Alignment:
Q  361 aatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| |||||||||||  |||||||| | || |||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  6610962 aatgaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcattctccactatcataaatgtaaagtgaaatata 6610878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 290 - 472
Target Start/End: Original strand, 39060334 - 39060513
Alignment:
Q  290 acaagatactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaag 389  Q
    |||| ||||||||||||| || | |||  ||||||||||  || |||||||| |||||| | || ||||| | ||||||| |||||||||||||||| ||    
T  39060334 acaatatactccctccgttccaatttaattgaaccatttgctcatttcacacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgag 39060433  T
Q  390 tgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtag 472  Q
    ||   ||||||| ||||||| |||||| |  ||||||||||||||||| || ||   ||||  ||||||||| ||||||||||    
T  39060434 tgcatttgttaagtattggtccattcttctttatcataaatgcaaagtagacta---tattgtattggaagtggtgaaagtag 39060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 33012545 - 33012395
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||||||||||| |||| ||||  |||||  || ||||| ||||||||| ||  ||  ||||||||||| | ||| ||||||||||||||||| |    
T  33012545 atactccctccgtcccggattaactgagtcatttgctcatttcatacatattaataaggacg-tataaatgaagaagagataaaaatggttttaagtgct 33012447  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| |||| |||||||| ||||| | | |||| ||||||||||||||    
T  33012446 cttgttaagtatttgtgcattcaccactcttagaaattcaaagtggaatata 33012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 24231125 - 24231051
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| |||||| || ||||||||| ||||| |||||||||||||| |||||||| |||||||||||||    
T  24231125 agagaaaaatgattttaactgttcttgttaagtattgatgcattctccactaccataaatggaaagtggaatata 24231051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 36446644 - 36446746
Alignment:
Q  335 ttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaa 434  Q
    |||||||||||||| | || | ||||||||||||| | | ||||||| || |||||| | ||||||  |||| |||||||||||||||||||||||||||    
T  36446644 ttcacacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatttgtgcattctccactatcataaatgcaa 36446743  T
Q  435 agt 437  Q
    |||    
T  36446744 agt 36446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 5357735 - 5357884
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||| | |||  ||||||||||  || || ||||| |||||| | || ||||| | ||||||| |||||||||||||||| ||||   |    
T  5357735 tactccctccgtcccaatttaattgaaccatttgctcattacacacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtctt 5357834  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||||| |||||| |  ||||||||||| ||||| |||||||    
T  5357835 tgttaagtattggttcattcttctttatcataaatgtaaagtagaatata 5357884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 334 - 431
Target Start/End: Complemental strand, 32539814 - 32539717
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    ||||||||||||||| |||| |  ||||| |||||| ||| ||| ||||||||||||| | || |||  |||||||||||||||||||||||||||||    
T  32539814 tttcacacatattaagataaatgaataaacgaaggagagacaaagatggttttaagtgcttttattatgtattggtgcattctccactatcataaatg 32539717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 5147451 - 5147563
Alignment:
Q  334 tttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    |||||||| |||||| || || ||||||| |||| |||||||||||||| |||| ||||  ||| | ||||||||||||||||| |  ||||||||||||    
T  5147451 tttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtccttatcaactattggtgcattcttctttatcataaatgc 5147550  T
Q  433 aaagtggaatata 445  Q
    ||||| |||||||    
T  5147551 aaagtagaatata 5147563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 441
Target Start/End: Original strand, 4576366 - 4576472
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||  |||||||||||  |||||||||| |||||| || |||||||||| || ||| |||||||||||||    
T  4576366 tttcacacatattaagaaaaatgtataaatgaaaaaaagagaaaaacagttttaagtgttcttgtcaagtattggtgca-tcaccattatcataaatgca 4576464  T
Q  434 aagtggaa 441  Q
    || |||||    
T  4576465 aaatggaa 4576472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 15254917 - 15254806
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||| |||||| ||||||||| ||||||||| | ||||||  |||| ||||||||||| ||||||| ||||||    
T  15254917 tttcacacgtattaagaaaaatgtataaatggaggaaaaagaaaaatgattttaagtgtttttgttatgtattagtgcattctccgctatcattaatgca 15254818  T
Q  434 aagtggaatata 445  Q
    || | |||||||    
T  15254817 aattagaatata 15254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 35585572 - 35585683
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||  ||||| ||||||||| |||||| |  ||||||||| ||||| |||||| ||||||||||||||  ||    
T  35585572 tttcacacatattaagaaaaatgtataaatgggggaaaaagaaaaatgattttaaatattcttgttaagtattgatgcattatccactatcataaagaca 35585671  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  35585672 aagtgaaatata 35585683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 427
Target Start/End: Complemental strand, 15814794 - 15814701
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcata 427  Q
    ||||||| ||||||||| || | ||||||||||||| ||||||||||  ||||||| | ||||||||| |||| ||| ||| ||||||||||||    
T  15814794 tttcacatatattaaaaaaaatgtataaatgaaggagagagaaaaattattttaagcgctcttgttaagtatttgtgtattttccactatcata 15814701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 6735377 - 6735424
Alignment:
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6735377 ttaagtatttgtgcattctccactatcataaatgcaaagtggaatata 6735424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 7311173 - 7311247
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||||| |||| | || |||| |||||||  ||| ||||||||||||||||| |||||||    
T  7311173 agagaaaaatggttttaagtgctcttatcaagtatttgtgcatttaccattatcataaatgcaaagtagaatata 7311247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 41184812 - 41184730
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattct 416  Q
    |||||||| |||||| | || | ||||||||||||| | |||||||| ||||||||||  |||||||| ||||||||||||||    
T  41184812 tttcacacgtattaagaaaaatgtataaatgaaggagaaagaaaaatagttttaagtgcacttgttaagtattggtgcattct 41184730  T

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Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 441
Target Start/End: Complemental strand, 4475393 - 4475291
Alignment:
Q  337 cacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaag 436  Q
    |||||||||||| | || | ||||| |||| ||||||||||||| |||   ||||  ||||| || ||||||||||||| ||| ||||||||||||||||    
T  4475393 cacacatattaagaaaagtgtataagtgaaagaaagagaaaaattgttg--agtgtccttgtcaagtattggtgcattcaccattatcataaatgcaaag 4475296  T
Q  437 tggaa 441  Q
    |||||    
T  4475295 tggaa 4475291  T

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Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 15898320 - 15898232
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| || |||||||||||  ||||||||  ||| |||||||||| |||||||| |  ||||||||||||||||| |||||||    
T  15898320 tataagtgaaagagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatata 15898232  T

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Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 470
Target Start/End: Original strand, 16926085 - 16926180
Alignment:
Q  372 gagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    ||||||||||||||| ||||   | ||||| |||||||||||||| |  ||||||||||| ||||| |||||   |||| |||||||||||||||||||    
T  16926085 gagaaaaatggttttgagtgccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaata---tattgaattggaagttgtgaaagt 16926180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 20190021 - 20189933
Alignment:
Q  358 ataaatgaaggaaagagaaaaa-tggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||| ||| ||||| | ||||||||||   ||||||| || || ||||||||||| ||||||||||| |||||||||||||    
T  20190021 ataaatgaaggagagataaaaaatagttttaagtgcatttgttaagtactgatgcattctccattatcataaatgtaaagtggaatata 20189933  T

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Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 443
Target Start/End: Original strand, 30437656 - 30437804
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||| ||||||| | |||  |||||||||| ||| |||||||| |||||| | || ||||| || |||| | | |||||||| ||||| |||| |     
T  30437656 atactcccaccgtcccaatttaattgaaccatttattcatttcacacttattaagaaaaatatattaacgaagaagacagaaaaatagttttgagtgttt 30437755  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    ||||||| ||||||| |||| | |  ||||||||||| ||||| |||||    
T  30437756 ttgttaattattggtccattattctttatcataaatgtaaagtagaata 30437804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 38979017 - 38978918
Alignment:
Q  373 agaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtag 472  Q
    |||||||||||||| ||||  ||| |||||||||||| |||||  |  ||||||||||||||||| |||||   ||||||||||  |||||||| |||||    
T  38979017 agaaaaatggttttgagtgcccttattaactattggtacattcctctttatcataaatgcaaagtagaata---tattaaattgagagttgtgatagtag 38978921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 471
Target Start/End: Original strand, 6629316 - 6629483
Alignment:
Q  299 tccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttg 397  Q
    ||||||||||||   ||| |||| || ||||||||||||||||||||||| || || | |||||||||| || ||   ||||| ||||| |||| |||||    
T  6629316 tccctccgtcccattttatctgagcctttttttcttttcacacatattaagaaaaagtgtataaatgaaagagag---aaaatagttttgagtg-tcttg 6629411  T
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    | || ||||||||||||||    ||| ||||||||||||||||| ||| ||||||||||| |||  ||||||||    
T  6629412 tcaagtattggtgcattcttttttattataaatgcaaagtggaa-ata-tattaaattgggagtgatgaaagta 6629483  T

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Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 4412510 - 4412436
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    ||||||||||||| ||||||||||| | ||||||   |||||||| ||||| ||||||||| ||||| |||||||    
T  4412510 tataaatgaaggagagagaaaaatgatattaagtctacttgttaagtattgatgcattctctactattataaatg 4412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 15814649 - 15814603
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  15814649 aattaatattgtattgaaaagtgaaatgactcagttattttgagaca 15814603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 35988824 - 35988675
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||| |||  |||  |||||| ||||||| ||||||| ||||||| || || | ||||| ||||  | |||||||||| |||||||||| |     
T  35988824 tactccctccgttccgttttaaatgaacctttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtg-tg 35988726  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| || |||||||||||||     ||||||||||||||||| |||||||    
T  35988725 ttgtcaagtattggtgcattcattcttatcataaatgcaaagttgaatata 35988675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 25814350 - 25814310
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  25814350 aattaatattgtattgaaaagtgaaatgattcagttatttt 25814310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 39060534 - 39060582
Alignment:
Q  487 aattaatattgtatt-gaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  39060534 aattaatattgtatttgaaaagtgaaatagctcagttattttgaaacac 39060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 8369819 - 8369866
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||| |||||| | |||||||||||| |||||    
T  8369819 aattaatattgtattgaaaaatgaaatggctcagttattttgggacac 8369866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 42575760 - 42575807
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||||||||||| | || ||||||||| |||||    
T  42575760 aattaatattgtattgaaaagtgaaatggctcggttattttgggacac 42575807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 527
Target Start/End: Complemental strand, 3725175 - 3725133
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||||   |||||||||||    
T  3725175 aaaattaatattgtattgaaaagtgaaatgactcagttatttt 3725133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 4044598 - 4044644
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||  |||| |||||||| ||||    
T  4044598 aattaatattgtattgaaaagtgaaatgattcaattattttgggaca 4044644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 475
Target Start/End: Complemental strand, 25108688 - 25108587
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||| ||||| ||||   ||||||| ||||| |||||||| |  ||||||||||| |||||  ||||   |||| |||||||||| ||||||||    
T  25108688 agagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataata---tattgaattggaagtggtgaaagt 25108592  T
Q  471 agtat 475  Q
    |||||    
T  25108591 agtat 25108587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 25111141 - 25111242
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||| ||||| ||||   |||| || ||||| |||||||| |  ||||||||||| ||||| |||||   |||| |||||||||| ||||||||    
T  25111141 agagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaata---tattgaattggaagtggtgaaagt 25111237  T
Q  471 agtat 475  Q
    |||||    
T  25111238 agtat 25111242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 475
Target Start/End: Complemental strand, 25167780 - 25167679
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||| ||||| ||||   ||||||| ||||| |||||||| |  ||||||||||| |||||  ||||   |||| |||||||||| ||||||||    
T  25167780 agagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataata---tattgaattggaagtggtgaaagt 25167684  T
Q  471 agtat 475  Q
    |||||    
T  25167683 agtat 25167679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 25170232 - 25170333
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||| ||||| ||||   |||| || ||||| |||||||| |  ||||||||||| ||||| |||||   |||| |||||||||| ||||||||    
T  25170232 agagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaata---tattgaattggaagtggtgaaagt 25170328  T
Q  471 agtat 475  Q
    |||||    
T  25170329 agtat 25170333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 31090419 - 31090345
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| |||| ||||  ||| | ||||||||||||||||| |  ||||||||| ||||||| |||||||    
T  31090419 agagaaaaatgattttgagtgcccttatcaactattggtgcattcttctttatcataaacgcaaagtagaatata 31090345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 35667000 - 35666926
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| |||||||||| | || |||| ||||||||||||  ||| ||| |||||| |||||| |||||||    
T  35667000 agagaaaaatagttttaagtgcttttcttaagtattggtgcatttaccattattataaatacaaagtagaatata 35666926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 436
Target Start/End: Original strand, 41594803 - 41594904
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||| ||||||||| | || ||||||| |||| || ||||||||||  |||||| || | |||| || ||||||| ||||| ||| |||||||||||||    
T  41594803 tttcatacatattaagaaaaatatataagtgaatgagagagaaaaataattttaaatgtttttgtcaagtattggt-cattcaccattatcataaatgca 41594901  T
Q  434 aag 436  Q
    |||    
T  41594902 aag 41594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Complemental strand, 7613693 - 7613652
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||    
T  7613693 aattaatattgtattaaaaagtgaaatggtttagttattttg 7613652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 435
Target Start/End: Original strand, 13422314 - 13422414
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||  |||||||| | |||||||||| |||||||| | | ||||  |||| ||||||||| |||||||||| |||||    
T  13422314 tttcacacatattaagaaaaatgtattgatgaaggagaaagaaaaatgg-tttaagtgctttcgttatgtatttgtgcattcttcactatcatacatgca 13422412  T
Q  434 aa 435  Q
    ||    
T  13422413 aa 13422414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 4195047 - 4194975
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    |||||||||||||||| ||||  ||| | |||||||| |||||||| |  ||||||||||| ||||| |||||    
T  4195047 agagaaaaatggttttgagtgcccttatgaactattgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 7276369 - 7276329
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||| |||||  |||||||||||    
T  7276369 aattaatattgtattgaaaagtaaaataactcagttatttt 7276329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 13422473 - 13422513
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  13422473 aattaatattgtattgaaaagtgaaatgaatcagttatttt 13422513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 42819016 - 42818944
Alignment:
Q  373 agaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||| ||||  ||| ||||  ||||||||||||| |  ||||||||||| ||||| |||||||    
T  42819016 agaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatcataaatgtaaagtagaatata 42818944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 1e-55; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 7425794 - 7425971
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| |||||| | || | |||||||||| || ||||||||||||||||||||| |||    
T  7425794 tactccctccgtcccgaattagctgagccattttttcatttcacacgtattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgttct 7425893  T
Q  396 tg-ttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  7425894 tgtttaagtattggtgcattctccactatcataaatgcaaagtggaata---tattgaattggaagttgtgaaagtagtat 7425971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 38181790 - 38181967
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||| |||| |  | |||||||||||| || ||||||||||||||||||||| ||    
T  38181790 atactccctcagtcccgagttagctgagccattttttcttttcacacatgttaagactaatatataaatgaaagagagagaaaaatggttttaagtgttc 38181889  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||| ||| |||||||||||| |||||||||||||||||||| | |||||   |||| ||||||||||||||||||||||||    
T  38181890 ttggtaagtattggtgcattttccactatcataaatgcaaaatagaata---tattgaattggaagttgtgaaagtagtat 38181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 475
Target Start/End: Complemental strand, 11616751 - 11616575
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||| |||| |||| ||||||  || ||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||| |||    
T  11616751 tactccctccgtcccggattaactgagccatttgctcatttcacacatattaaaaaaa-tgtataaatgaaggagagagaaaaatggttttaagtgctct 11616653  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||  ||| |||||| ||| |||||||| ||||    
T  11616652 tgttaagtattggtgcattctccactatcatatatgcaaagtggaatata--attgaattgggagtggtgaaagttgtat 11616575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 301 - 425
Target Start/End: Original strand, 5083394 - 5083518
Alignment:
Q  301 cctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtta 400  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||| ||||||||| |||||| |||||||||| ||||||||    
T  5083394 cctccgtcccgaattagctgaaccattttttcttttcacatatattaaaacaaatgtataaataaaggaaagataaaaatagttttaagtgctcttgtta 5083493  T
Q  401 actattggtgcattctccactatca 425  Q
    | ||||||||||| ||||| |||||    
T  5083494 agtattggtgcatactccattatca 5083518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 44604395 - 44604543
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||| |||| |||||||||||  ||   ||||||||||||| | || | ||||||||||||| ||||||||||| ||||||||| |||    
T  44604395 tactccctccgtcccggattaactgaaccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttct 44604494  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||||||    
T  44604495 tgttaagtattggtttattctccactatcataaa-gcaaagtggaatata 44604543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 324 - 445
Target Start/End: Original strand, 37490563 - 37490684
Alignment:
Q  324 cattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactat 423  Q
    ||||| ||| |||||||||| |||| | || | ||||||||||||| ||||||||||| ||||||||| | || |||| |||||||||||||||||||||    
T  37490563 catttattcatttcacacatgttaagaaaaatgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactat 37490662  T
Q  424 cataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||||||    
T  37490663 cataaatgcaaagtggaatata 37490684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 336 - 475
Target Start/End: Original strand, 40038066 - 40038204
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||| ||||||| |||| | ||||||||||||||||||||||||  |||||| |||||||||||| |||| ||| ||||| ||||||||||||| ||||    
T  40038066 tcacatatattaagataaatgtataaatgaaggaaagagaaaaataattttaaatgatcttgttaagtatt-gtgtattcttcactatcataaatacaaa 40038164  T
Q  436 gtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||  |||||||||||||||| |||||  ||||||||||||    
T  40038165 gtaaaatatactattaaatttgaagtgatgaaagtagtat 40038204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 33584749 - 33584604
Alignment:
Q  298 ctccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttg 397  Q
    |||||||||||||| |||| |||| ||||||  ||   ||||||||||||| | |  | ||||||||||||| ||||||||||||||||||||| | |||    
T  33584749 ctccctccgtcccggattaactgagccatttactcaaatcacacatattaagaca--tgtataaatgaaggagagagaaaaatggttttaagtgctattg 33584652  T
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| |||||||| |||||||| ||||||||||||||| |||||||||    
T  33584651 ttaagtattggtgtattctccagtatcataaatgcaaaatggaatata 33584604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 23058970 - 23058860
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || |||||||||||| || |||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  23058970 tttcacacgtattaagaaaaatatataaatgaaagagagagaaaaatagttttaagtgttcttgttag-tattggtgcattctccactatcataaatgca 23058872  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  23058871 aagtgaaatata 23058860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 47454156 - 47454045
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || ||||||||||||||| |||| ||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||| |    
T  47454156 tttcacacgtattaagaaaaatatataaatgaaggagagagtaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaatgta 47454057  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  47454056 aagtgaaatata 47454045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 29257738 - 29257588
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||| ||||||| |||| | || ||||||  ||   ||||||||||||| | || | ||||||||||| | ||| ||||||||||||||||| ||    
T  29257738 atactcccttcgtcccggattaaccgagccatttgctcaaatcacacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctc 29257639  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  29257638 ttgttaattattggtctattttccactatcataaatgcaaagtggaatata 29257588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 2846637 - 2846742
Alignment:
Q  340 acatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtgg 439  Q
    ||||||||| | || | |||||||||| || |||||||||| |||||||||| ||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  2846637 acatattaagacaaatgtataaatgaacgagagagaaaaatagttttaagtgctcttgttaagtattggtctattctccactatcataaattcaaagtgg 2846736  T
Q  440 aatata 445  Q
    ||||||    
T  2846737 aatata 2846742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 2842030 - 2842118
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||||||||||||| ||||||| | |||| || ||||| |||||||||||||||||||||||||||||| ||||||    
T  2842030 tataaatgaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattctccactatcataaatgcaaagtgaaatata 2842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 5724663 - 5724773
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||| |||||||||| ||||||||||  |||||||| |||| |||||||||||||||||||||||| |    
T  5724663 tttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgc-cttgttaagtattagtgcattctccactatcataaatgta 5724761  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  5724762 aagtgaaatata 5724773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 29434536 - 29434646
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | | ||||||||| | |||||||||| |||||||||| | ||||||| |||||||| |||||||||| |||||||||||    
T  29434536 tttcacacatattaagaaaattttttaaatgaag-agagagaaaaatagttttaagtgcttttgttaagtattggtggattctccactttcataaatgca 29434634  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  29434635 aagtggaatata 29434646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 18235321 - 18235231
Alignment:
Q  355 tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||| ||| ||||||  |||||| ||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  18235321 tatataaatgaaggagagaaaaaaataattttaaatgcacttgttaagtattggtgcattctccactatcataaatgtaaagtggaatata 18235231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 36117791 - 36117702
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccacta-tcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  36117791 tataaataaaggaaagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactattcataaatgtaaagtggaatata 36117702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 30463145 - 30463057
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || |||||||||| ||||||||||  |||||||| |||||||||||||||||| |||||||||| ||| |||||||||    
T  30463145 tataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccacaatcataaatgtaaaatggaatata 30463057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 475
Target Start/End: Original strand, 33774022 - 33774136
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||| |||| || |||||||||| ||||| |||| ||||||||| ||||| || |||||||||||||||| ||||||||||||||||||   | |||||    
T  33774022 tataagtgaaagagagagaaaaatagttttgagtg-tcttgttaagtattgatgtattctccactatcatagatgcaaagtggaatatac---tgaattg 33774117  T
Q  457 gaagttgtgaaagtagtat 475  Q
     ||||||||||||||||||    
T  33774118 taagttgtgaaagtagtat 33774136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 27234664 - 27234554
Alignment:
Q  324 cattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactat 423  Q
    ||||| ||| ||||||||||||||| | || | |||||||||| || |||||||| || ||||||||| | ||||||| ||||| |||||||||||||||    
T  27234664 catttgttcatttcacacatattaagaaaaatgtataaatgaatgacagagaaaattg-ttttaagtgtttttgttaagtattgatgcattctccactat 27234566  T
Q  424 cataaatgcaaa 435  Q
    ||||||||||||    
T  27234565 cataaatgcaaa 27234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 34064405 - 34064256
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatatt-aaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||| |||||  ||| |||| || ||||||||||||||||||||| |||| || | ||||||||||  | |||||||||| ||||| |||| ||    
T  34064405 tactccctccctcccgttttatctgagcctttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtg-tc 34064307  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||||||||||||    ||||||||||| ||||| |||||||    
T  34064306 ttgttaagtattggtgcattctttcttatcataaatgtaaagtagaatata 34064256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 49100419 - 49100568
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||||||||| |||| | |     || |||||||| |||||| | || | |||||||||| || |||||||||| |||| |||||  |    
T  49100419 atactccctccgtcccgaattaactgagctaaaagctcatttcacacgtattaagaaaaatgtataaatgaaagacagagaaaaatagttt-aagtgcac 49100517  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  |||||||||||||||||||| |||||||||||||    
T  49100518 ttgttaagtattggtttattctccactatcataaatgtaaagtggaatata 49100568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 475
Target Start/End: Complemental strand, 32776136 - 32775997
Alignment:
Q  334 tttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||||||||| || || | ||||| ||||||| |||||||||||||||| ||||   ||||||| |||||||||||||| |  |||||||||||     
T  32776136 tttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatcataaatgt 32776037  T
Q  433 aaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||| |||||   |||| |||||| ||| |||||||||||||    
T  32776036 aaagtagaata---tattgaattgggagtggtgaaagtagtat 32775997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 46095376 - 46095486
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||| ||||||||| | || | ||||||| ||||| | | |||||||||||| |||| ||||||||| |||| |||||||||| |||||||||||||||    
T  46095376 tttcatacatattaagaaaaatgtataaataaaggagaaa-aaaaatggttttgagtgctcttgttaaatatttgtgcattctctactatcataaatgca 46095474  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  46095475 aagtgaaatata 46095486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 17266142 - 17266068
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||| ||||| | || |||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  17266142 agagaaaaatggtttaaagtgtttttattaagtattggtgcattcttcactatcataaatgcaaagtgaaatata 17266068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 445
Target Start/End: Complemental strand, 23704043 - 23703957
Alignment:
Q  359 taaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| |||||||||| |||||||| |  |||||||| ||||| ||||||||||||||||||||||| ||| || ||||||    
T  23704043 taaatgaaggagagagaaaaatagttttaagcgcacttgttaattattgctgcattctccactatcataaatgtaaaatgaaatata 23703957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 26938508 - 26938561
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa 348  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  26938508 atactccctccgtcccgaattagttgaaccattttttcatttcacacatattaa 26938561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 21387495 - 21387546
Alignment:
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  21387495 cttgttaagtattggtgcattctccactatcataaatgtaaagtggaatata 21387546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 34963724 - 34963877
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||||||||| |||| | |     || ||||| || |||||| | || | |||||||||  ||  ||||||||| ||||||||||| |    
T  34963724 atactccctccgtcccgaattaactgagcaaaaaactcatttcatacgtattaagaaaaatgtataaatgatagagggagaaaaatagttttaagtgaac 34963823  T
Q  395 ttgttaactattggtgcattctc---cactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||||||||||   |||||||||||||| |||||| ||||||    
T  34963824 ttgttaaatattggtgcattctctttcactatcataaatgtaaagtgaaatata 34963877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 48981808 - 48981697
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| |||| | ||||||||||| | | |||||||| ||||||| ||  |||||||  |||||||  ||| |||||||||||||||| |    
T  48981808 tttcacacgtattaagataaatgtataaatgaagaagaaagaaaaatagttttaaatgcacttgttatgtattggtatattatccactatcataaatgta 48981709  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  48981708 aagtggaatata 48981697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 1643330 - 1643431
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    ||||||||||  ||| ||||| | || |||| |||||||||||||| ||  ||||||||||||||||||||||   |||||||||| |||||| ||||||    
T  1643330 agagaaaaataatttaaagtgcttttattaagtattggtgcattcttcataatcataaatgcaaagtggaata---tattaaattgaaagttgggaaagt 1643426  T
Q  471 agtat 475  Q
    |||||    
T  1643427 agtat 1643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 445
Target Start/End: Original strand, 31581423 - 31581509
Alignment:
Q  359 taaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| ||| |||||| |||||||||    ||||||| ||||||||||||||||| ||||||||||| ||| |||||||||    
T  31581423 taaatgaaggagagataaaaatagttttaagtacatttgttaagtattggtgcattctccaatatcataaatgtaaaatggaatata 31581509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 45890775 - 45890888
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||| |||||| ||||   |||| ||| |||||||| |||||| | || | |||||| |||||| |||||||||||||||||| || | |    
T  45890775 tactccctccgtcctgaattaactgagttatttgttcatttcacacgtattaagaaaaatgtataaaagaaggagagagaaaaatggttttaaatgcttt 45890874  T
Q  396 tgttaactattggt 409  Q
    |||||| |||||||    
T  45890875 tgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 34001816 - 34001925
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||| ||||||||| | || |||| |||| || ||||||||||| |||||||||||| ||||||||| ||||| ||   | |||| |||||||||||||    
T  34001816 tttcagacatattaagaaaa-tatacaaataaatgaaagagaaaa-tggttttaagtgctcttgttaagtattgatgtggtatccattatcataaatgca 34001913  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  34001914 aagtggaatata 34001925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 8150111 - 8150000
Alignment:
Q  334 tttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||||||||| || || | ||||| |||| || ||||||||||||||||||||| | |||| || |||| ||||||| |||| |||||||||  |    
T  8150111 tttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtg-ttttgtcaaatatttgtgcattttccattatcataaaatc 8150013  T
Q  433 aaagtggaatata 445  Q
    ||||| |||||||    
T  8150012 aaagtagaatata 8150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 37157157 - 37157117
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  37157157 aattaatattgtattgaaaagtgaaatagctcagttatttt 37157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 2849407 - 2849296
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||| || |||||||||| |||||  |||   |||| || |||||||||||||| |  ||||||||||| |    
T  2849407 tttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaatgta 2849308  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  2849307 aagtagaatata 2849296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 7426000 - 7426047
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||    
T  7426000 aattaatattgtattgaaaagtgaaatggctcagttattttgggacac 7426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 11616547 - 11616500
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||    
T  11616547 aattaatattgtattgaaaagtgaaatggctcagttattttgggacac 11616500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 441
Target Start/End: Original strand, 28923232 - 28923291
Alignment:
Q  382 gttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    |||||||||||| |||| || ||||||||||||| ||| ||| |||||||||||||||||    
T  28923232 gttttaagtgattttgtcaagtattggtgcattcaccattattataaatgcaaagtggaa 28923291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 475
Target Start/End: Complemental strand, 38589858 - 38589748
Alignment:
Q  362 atgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagt 461  Q
    ||||| || |||||||||||||||| | ||  ||| | ||||||||||||||||| |  ||||||||||| ||||| |||||   |||| |||||| |||    
T  38589858 atgaaagagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaata---tattgaattgggagt 38589762  T
Q  462 tgtgaaagtagtat 475  Q
     |||||||||||||    
T  38589761 ggtgaaagtagtat 38589748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 475
Target Start/End: Original strand, 45218113 - 45218251
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||| ||||| | || | |||||| ||| || |||||||||| ||||| ||||   || | || |||||||||||||| |  ||||||||||| |    
T  45218113 tttcacacaaattaagaaaagtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgta 45218212  T
Q  434 aagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||| |||||   |||| |||||| |||||||||||||||||    
T  45218213 aagtagaata---tattgaattgggagttgtgaaagtagtat 45218251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 445
Target Start/End: Original strand, 23186167 - 23186209
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  23186167 tattggtgcattctccactatcataaatacaaagtagaatata 23186209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 40803605 - 40803678
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    ||||||||||||| ||||||||||  ||||| |||  |||||||| ||||||||  |||||||||||||||||||    
T  40803605 tataaatgaaggagagagaaaaataatttta-gtgtacttgttaaatattggtgttttctccactatcataaatg 40803678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 334 - 475
Target Start/End: Complemental strand, 37264464 - 37264327
Alignment:
Q  334 tttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||||||||| || || ||||||| |||| ||  ||||||||||||||| ||||  ||||| || ||||| ||||||   |  ||||||||||||    
T  37264464 tttcacacatattaagaaaaagtatataagtgaaaga--gagaaaaatggttttgagtgcccttgtcaagtattgatgcattgctctttatcataaatgc 37264367  T
Q  433 aaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||| |||||   |||| |||||| ||| |||||||||||||    
T  37264366 aaagtagaata---tattgaattgggagtggtgaaagtagtat 37264327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 29997023 - 29997087
Alignment:
Q  373 agaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||||||| | ||  |||||||| |||||||||||||| |  |||||||||||||||||    
T  29997023 agaaaaatggttttgaatgtccttgttaattattggtgcattcttctttatcataaatgcaaagt 29997087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 32971996 - 32972084
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| || |||||||||||||||| ||||  ||| | |||||||||||||||||    | ||||||||||||||| |||||||    
T  32971996 tataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtcataaatgcaaagtagaatata 32972084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 475
Target Start/End: Original strand, 46288461 - 46288524
Alignment:
Q  409 tgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||||| |||||||| ||||||||||||||||   |||| ||||| ||||| ||||||||||||    
T  46288461 tgcattctcgactatcattaatgcaaagtggaata---tattgaattgaaagttatgaaagtagtat 46288524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 47238346 - 47238266
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||| |||| || |||||||||||||||| ||||  ||| | ||| ||||||||||||| |  |||||||||||||||||    
T  47238346 tataagtgaaagagagagaaaaatggttttgagtgcccttatcaacaattggtgcattcttctttatcataaatgcaaagt 47238266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 375
Target Start/End: Original strand, 1643235 - 1643314
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagaga 375  Q
    ||||||||||||||||||||| | || ||||||  || ||||||||||||||| | || | |||||||||| || |||||    
T  1643235 tactccctccgtcccgaattaaccgagccatttcctcatttcacacatattaagaaaaatgtataaatgaaagagagaga 1643314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 43780216 - 43780141
Alignment:
Q  360 aaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||| |||| |||||||  |||||||||  ||||||| | ||||||||||||| ||| ||| |||||||||||    
T  43780216 aaatgaaagaaatagaaaaagagttttaagtactcttgtttaatattggtgcattcaccattattataaatgcaaa 43780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 45890957 - 45891004
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||| ||||||||||||||||||||| | |||||||||||| |||||    
T  45890957 aattattattgtattgaaaagtgaaattgctcagttattttgtgacac 45891004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 48981365 - 48981318
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||    
T  48981365 aattaatattgtattgaaaagtgaaatgactcagttattttgggacac 48981318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 7456600 - 7456650
Alignment:
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||| || |||||||||||||||||||  |||||||||||||    
T  7456600 ttgttaagtattgatgtattctccactatcataaatataaagtggaatata 7456650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 9658952 - 9658887
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||||||||| |||| |||||| ||||||||||||||| |||  ||| ||||||| |||||    
T  9658952 agagaaaaatggttttgagtg-tcttgtgaactattggtgcattttcccttatgataaatgtaaagt 9658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 12308365 - 12308319
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||| ||||||   |||||||||||||||||    
T  12308365 aattaatattgtattgaaaattgaaatgactcagttattttgagaca 12308319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 437
Target Start/End: Complemental strand, 19688082 - 19688008
Alignment:
Q  363 tgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||| | ||||||||| ||||||||| |||||| || ||||| || |||  ||| |||||||||||||||||    
T  19688082 tgaaggagatagaaaaatgtttttaagtgttcttgtcaagtattgatgaatttaccattatcataaatgcaaagt 19688008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 28923348 - 28923394
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||| |||||||  ||||||||||| |||||    
T  28923348 aattaatattgtattgaaaaatgaaataagtcagttattttaagaca 28923394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 40590841 - 40590891
Alignment:
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||||||| ||| ||||||||||| |||||| |||||||    
T  40590841 ttgttaagtattggtgcattttccgctatcataaatacaaagtagaatata 40590891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 46288552 - 46288598
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||    
T  46288552 aattaatattatattgaaaagtgaaatggctcagttattttgggaca 46288598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 533
Target Start/End: Original strand, 5724829 - 5724874
Alignment:
Q  488 attaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||| | ||| |||||||| ||||    
T  5724829 attaatattgtattgaaaagtgaaatggctcacttattttgggaca 5724874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 33774162 - 33774203
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  33774162 aattaatattgtattgaaaagtgaaatgactcagttattttg 33774203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 31581564 - 31581604
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  31581564 aattaatattgtattgaaaagtgaaatgactcagttatttt 31581604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 37491027 - 37491067
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||| |||||  |||||||||||    
T  37491027 aattaatattgtattgaaaagtaaaataactcagttatttt 37491067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 39498660 - 39498620
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  39498660 aattaatattgcattgaaaagagaaataggtcagttatttt 39498620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 533
Target Start/End: Original strand, 45480172 - 45480220
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    ||||||||||||| |||||||| | |||||| |||||||||| ||||||    
T  45480172 aaaattaatattgcattgaaaaataaaatagatcagttatttcgagaca 45480220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 303 - 475
Target Start/End: Original strand, 43639440 - 43639609
Alignment:
Q  303 tccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaac 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||||| | |||||||     
T  43639440 tccgtcccgaattatctgaaccattttttcttttcacacatattaagacaaatatataaatgaaggagagagaaaaatggttttaagtgctgttgttaag 43639539  T
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||| |||||| ||||||||||||||||||||||| ||||   |||| ||||||||||||||||||||||||    
T  43639540 tattgatgcattttccactatcataaatgcaaagtgaaata---tattgaattggaagttgtgaaagtagtat 43639609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 21296420 - 21296596
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || | ||||||||||||| |||| |||||| |||||| || |||    
T  21296420 tactccctccgtcccgaattagctgaaccattttttcttttcacacatactaagacaaatgtataaatgaaggagagaggaaaatgattttaaatgctct 21296519  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| |||||||||||| | |||||||||||||||||||| |||||   |||| ||||||||||||||||||||||||    
T  21296520 tgttaagtattggtgcatttttcactatcataaatgcaaagtagaata---tattgaattggaagttgtgaaagtagtat 21296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 54122140 - 54122317
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||||||||||||| | || | ||||||||||||| |||||||||| ||||||| || |     
T  54122140 atactccctctgtcctgaattagctgagccattttttcatttcacacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgttt 54122239  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||   |||| ||||||||||||||||||||||||    
T  54122240 ttgttaagtattggtgcattctccactatcataaatgcaaagtgaaata---tattgaattggaagttgtgaaagtagtat 54122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 39866508 - 39866617
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  39866508 tttcacacatattaagaaaaatgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtattctccactatcataaatgca 39866607  T
Q  434 aagtggaata 443  Q
    ||||| ||||    
T  39866608 aagtgaaata 39866617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 9017953 - 9017842
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||||| || | |||||||||| || |||||||||| |||||||||| | ||||||| ||||||||||||||||||||| |||||||||    
T  9017953 tttcacacatattaaaaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattataaatgca 9017854  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  9017853 aagtgaaatata 9017842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 5245603 - 5245453
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||  |||| |||| ||||||  ||   ||| ||||||||| | || | |||| |||||||| |||||||||| |||||||||| ||    
T  5245603 atactccctccgtcccagattaactgagccatttgctcaaatcatacatattaagacaaatgtatacatgaaggagagagaaaaatagttttaagtgctc 5245504  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||| |||||||| |||||||||| ||||||||||||||    
T  5245503 ttgttaagtattggtgtattctccaatatcataaatacaaagtggaatata 5245453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 334 - 443
Target Start/End: Complemental strand, 2868726 - 2868617
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||||| ||||||||||||||||||||  | ||||||  ||||| ||||||||||||| |||||||||||    
T  2868726 tttcacacatattaagaaaaatgtataaatgaaggagagagaaaaatggttttaagttcttttgttatgtattgctgcattctccactgtcataaatgca 2868627  T
Q  434 aagtggaata 443  Q
    ||||||||||    
T  2868626 aagtggaata 2868617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 17776911 - 17777060
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||| ||||||||||  |||| ||||  |||||  || |||||||| |||||||| || | |||||||||| || ||||||||||||||||| ||| | |    
T  17776911 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgcttt 17777010  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    | |||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  17777011 ttttaagtatttgtgcattctccactaccataaatgcaaagtggaatata 17777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 19078212 - 19078361
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||| ||||||||||  |||| ||||  |||||  || |||||||| |||||||| || | |||||||||| || ||||||||||||||||| ||| | |    
T  19078212 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgcttt 19078311  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    | |||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  19078312 ttttaagtatttgtgcattctccactaccataaatgcaaagtggaatata 19078361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 26134660 - 26134769
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||||||||| | || | ||||||||||||| |||||||||| |||||||||| ||||||||| |||| ||  ||||||||||||||||||||||||    
T  26134660 tcacacatattaagacaaatgtataaatgaaggagagagaaaaattgttttaagtgctcttgttaagtattagtctattctccactatcataaatgcaaa 26134759  T
Q  436 gtggaatata 445  Q
    ||| ||||||    
T  26134760 gtgaaatata 26134769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 33994786 - 33994698
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||||||||||  |||||||||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33994786 tataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgcattctccactatcataaatgtaaagtggaatata 33994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 10855146 - 10855035
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| |||| | ||||||||||||| |||||||||| |||||||||| | || |||  |||||||||||| |||||| |||||||||||    
T  10855146 tttcacacgtattaagataaatgtataaatgaaggagagagaaaaatagttttaagtgtttttattatgtattggtgcattatccactctcataaatgca 10855047  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  10855046 aagtggaatata 10855035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 36097571 - 36097721
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||||||| ||| |||| ||||  |||||  || ||||| ||||||||| || |||  ||||||||||||| ||||||||||||||||||||  |    
T  36097571 atactccctccgttccggattaactgagtcatttgctcatttcatacatattaagaagaacg-tataaatgaaggagagagaaaaatggttttaagtact 36097669  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||| ||||||||||||||| | | |||||||||||||||||||    
T  36097670 cttgttaagtatcggtgcattctccactgttagaaatgcaaagtggaatata 36097721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 15280795 - 15280646
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||| |||| ||||  |||||  ||   ||||||||||||| |||| | ||||||||||||| ||| ||||||| |||||||||  |    
T  15280795 atactccctccgtcccggattaactgagtcatttgctcaaatcacacatattaagataaatgtataaatgaaggagagataaaaatgattttaagtgcac 15280696  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| | ||| |||||||||||||||||||| |||||||||||||    
T  15280695 ttgttcacta-tcgtgtattctccactatcataaatggaaagtggaatata 15280646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 39364953 - 39365071
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaa-tggttttaagtgat 393  Q
    ||||||||||||||||||||||||||| ||| ||  || ||||||||||||||| | || | ||||||| ||||| ||||||||| |||||||||||| |    
T  39364953 atactccctccgtcccgaattagctgagccacttgctcatttcacacatattaagaaaaatgtataaataaaggagagagaaaaagtggttttaagtgct 39365052  T
Q  394 cttgttaactattggtgca 412  Q
    |||||||| ||||||||||    
T  39365053 cttgttaagtattggtgca 39365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 435
Target Start/End: Original strand, 11251082 - 11251183
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||| ||||||| | || | |||||||||| || ||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11251082 tttcacatatattaagaaaaatgtataaatgaatgagagaaaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgca 11251181  T
Q  434 aa 435  Q
    ||    
T  11251182 aa 11251183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 32827259 - 32827370
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||| ||| |||||| ||||||||||  |||||||  ||||||||||||||||||||||||||||| |    
T  32827259 tttcacacgtattaagaaaaatgtataaatgaaggagagaaaaaaatagttttaagtgcacttgttacgtattggtgcattctccactatcataaatgta 32827358  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  32827359 aagtgaaatata 32827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 357 - 438
Target Start/End: Original strand, 1772084 - 1772165
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtg 438  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||  |||||||||||||||||| ||||||||    
T  1772084 tataaataaaggagagagaaaaatggttttaagtgttcttgttaagtattggtatattctccactatcataaaagcaaagtg 1772165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 14756073 - 14756180
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| | || | ||||| | ||||| ||||||||||  ||||||||| ||||||||| || |||| |||||||||||||||||||||||||||    
T  14756073 acacatattaagaaaaatgtataattaaaggagagagaaaaataattttaagtgctcttgttaagtactggtacattctccactatcataaatgcaaagt 14756172  T
Q  438 ggaatata 445  Q
     |||||||    
T  14756173 agaatata 14756180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 53876352 - 53876502
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||  ||||| ||||  ||||| ||  ||||| | ||||||| | || | |||||||||||||  || ||||||| ||||||||| |     
T  53876352 atactccctccgtcctcaattaactgagtcatttgtttatttcatagatattaagaaaaatgtataaatgaaggagtgaaaaaaatgattttaagtgctt 53876451  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||| ||||||| |||||||||||||||| |||||| ||||||    
T  53876452 ttgttaaatatttgtgcattttccactatcataaatgtaaagtgaaatata 53876502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 54458303 - 54458375
Alignment:
Q  373 agaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||||||||    
T  54458303 agaaaaatgattttaagtgattttgttaagtatgggtgcattctccattatcataaatgtaaagtggaatata 54458375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 54845494 - 54845582
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| |||||||||| |||||||||| | |||||||  || | ||||||||| | |||||||||||||||||||||||||    
T  54845494 tataaatgaaggagagagaaaaatagttttaagtgtttttgttaaggatcgatgcattctctagtatcataaatgcaaagtggaatata 54845582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 26143064 - 26142950
Alignment:
Q  323 ccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaa--gtgatcttgttaactattggtgcattctccac 420  Q
    ||||||| || ||||||||||||||| | || | ||||||| ||||| |||||||| ||||||||   ||  |||| |||| ||||||||||||||||||    
T  26143064 ccattttctcatttcacacatattaagacaaatgtataaataaaggagagagaaaattggttttataggttctctttttaagtattggtgcattctccac 26142965  T
Q  421 tatcataaatgcaaa 435  Q
    |||||||||||||||    
T  26142964 tatcataaatgcaaa 26142950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 32023078 - 32023167
Alignment:
Q  357 tataaatgaaggaaagagaaaaatg-gttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| | ||||||||  |||||||||  | ||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  32023078 tataaatgaaggagatagaaaaataagttttaagtacttttgttaagtattggtgcattctccactattataaatgcaaagttgaatata 32023167  T

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Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 475
Target Start/End: Complemental strand, 54494034 - 54493922
Alignment:
Q  360 aaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaa 459  Q
    |||||||| | ||||||| || ||||||||||  |||||||| |||||| | |||||||||||||||||||| |||||| ||||   |||||||||||||    
T  54494034 aaatgaagaagagagaaatatagttttaagtgcacttgttaagtattggcgtattctccactatcataaatgtaaagtgaaata---tattaaattggaa 54493938  T
Q  460 gttgtgaaagtagtat 475  Q
     |  ||||||||||||    
T  54493937 atgatgaaagtagtat 54493922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 9218305 - 9218186
Alignment:
Q  326 ttttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatc 424  Q
    ||||||||||||||||||||||| || || | ||||| |||| || |||||||||| ||||| |||| ||| ||||| ||||||||||||||    ||||    
T  9218305 ttttttcttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tctcgttaagtattggtgcattctttcttatc 9218207  T
Q  425 ataaatgcaaagtggaatata 445  Q
    ||||||||||||| |||||||    
T  9218206 ataaatgcaaagtagaatata 9218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 52325306 - 52325218
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||| | ||||||| |||||| |||| | ||||||  |||||||||||||| | ||||||||||||||||||||||||||    
T  52325306 tataaataaaggagatagaaaaagggtttttagtgttattgttatgtattggtgcattctacgctatcataaatgcaaagtggaatata 52325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 45392237 - 45392131
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||| |||||||| || ||||||||| ||||| | ||| |||| |||||||||||  |||||||||||||||||||| || |||||| |||||| |||||    
T  45392237 acacgtattaaaaaaa-tatataaataaaggagaaagagaaatagttttaagtgaatttgttaactattggtgcattatctactatcgtaaatgtaaagt 45392139  T
Q  438 ggaatata 445  Q
    | ||||||    
T  45392138 gaaatata 45392131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 22202283 - 22202368
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaat 380  Q
    |||||| ||| |||| |||||| ||||  ||||||||  ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  22202283 atactcgctctgtccagaattaactgagtcattttttaatttcacacatattaagataaatgtataaatgaaggaaagagaaaaat 22202368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 49408693 - 49408589
Alignment:
Q  302 ctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtta 400  Q
    |||||||| | ||||  ||||||||||  || ||||| ||||||||| ||||| | |||||||||||||||||||||||| |||||||||| ||||||||    
T  49408693 ctccgtcctggattaattgaaccatttgctcatttcatacatattaagaataatt-tataaatgaaggaaagagaaaaatagttttaagtgttcttgtta 49408595  T
Q  401 actatt 406  Q
    | ||||    
T  49408594 agtatt 49408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 438
Target Start/End: Original strand, 55415417 - 55415498
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtg 438  Q
    ||||||| || || |||||||||||||||||| || | ||||||| ||||||||||||||  |||||||||||| |||||||    
T  55415417 tataaataaatgagagagaaaaatggttttaactgtttttgttaagtattggtgcattctttactatcataaatacaaagtg 55415498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 22202403 - 22202455
Alignment:
Q  393 tcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  22202403 tcttgttaagtattggtgcattatccactatcataaatgcaaagttgaatata 22202455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 46785896 - 46786047
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||| ||||| | |||| ||||  |||||  || ||||||| ||||||| | || | ||| | | ||||| ||| |||||| ||||||| ||||||    
T  46785896 tactcccttcgtcctggattaactgagtcatttactcatttcacatatattaagaaaaatgtattagtaaaggagagaaaaaaatagttttaaatgatct 46785995  T
Q  396 tgttaact--attggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| |  ||||||  ||||||||||||||||||||||||||| ||||||    
T  46785996 tgttaagtgtattggtatattctccactatcataaatgcaaagtgaaatata 46786047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 48744412 - 48744300
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaagga-aagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    |||||||| |||||| | || | ||||||||||| | || | |||||| ||||||||||   ||||||| ||||| |||||||||||||||||||||||     
T  48744412 tttcacacgtattaagaaaagtgtataaatgaagaagaaaaaaaaaatagttttaagtgcatttgttaagtattgatgcattctccactatcataaatgt 48744313  T
Q  433 aaagtggaatata 445  Q
    |||||| ||||||    
T  48744312 aaagtgaaatata 48744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 54783092 - 54783004
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || |||||||||| ||||||||||  ||| |||| |||||||||||| | | |||||||||||| |||||| ||||||    
T  54783092 tataaatgaatgagagagaaaaatagttttaagtgcacttcttaagtattggtgcattatgcgctatcataaatgtaaagtgaaatata 54783004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 8706275 - 8706191
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | ||||| ||||| ||||||||| ||||||||| ||||| |||||||| ||    ||||||||||||||||||||||    
T  8706275 tataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattcttca----cataaatgcaaagtggaatata 8706191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 9058162 - 9058078
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | ||||| ||||| ||||||||| ||||||||| ||||| |||||||| ||    ||||||||||||||||||||||    
T  9058162 tataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattcttca----cataaatgcaaagtggaatata 9058078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 475
Target Start/End: Complemental strand, 26832183 - 26832085
Alignment:
Q  374 gaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagt 473  Q
    ||||||| |||||| ||| |||| |||| ||||| |||||||||||| | ||||||||||||||| ||||   ||||||||||| |||  ||||||||||    
T  26832183 gaaaaatagttttacgtgctcttattaagtattgatgcattctccaccaccataaatgcaaagtgaaata---tattaaattggtagtgatgaaagtagt 26832087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 1772233 - 1772279
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  1772233 aattaatattgtattgaaaaatgaaatggttcagttattttgagaca 1772279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 15082117 - 15082043
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||||||||||| |||  |||| ||||||||||||||||| ||||||||| ||||| || ||||||    
T  15082117 agagaaatatggttttaagtgctctctttaaatattggtgcattctccattatcataaaagcaaaatgaaatata 15082043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 334 - 428
Target Start/End: Complemental strand, 41031727 - 41031633
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataa 428  Q
    |||||||| |||||||| || | ||| || |||| | | |||||||| ||||||||||  |||||||| |||||||||||| |||||||||||||    
T  41031727 tttcacacgtattaaaaaaaatgtatgaaagaagaagaaagaaaaatagttttaagtgcacttgttaagtattggtgcattttccactatcataa 41031633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 11529125 - 11529177
Alignment:
Q  393 tcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  11529125 tcttgttaagtattgatacattctccaatatcataaatgcaaagtggaatata 11529177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 39329697 - 39329816
Alignment:
Q  326 ttttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatc 424  Q
    ||||||||||||||||||||||| || || | ||||| |||| || | ||| |||| ||||| | || ||||||||| ||||||||||||||    ||||    
T  39329697 ttttttcttttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatg-tcttgttaagtattggtgcattctttcttatc 39329795  T
Q  425 ataaatgcaaagtggaatata 445  Q
    ||||||||||||| |||||||    
T  39329796 ataaatgcaaagtagaatata 39329816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 44218989 - 44219099
Alignment:
Q  334 tttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||||||||| || || | ||||| | || ||||||||||||||||||| |||| |||||| || | ||||||||||| ||| |||||||||| |    
T  44218989 tttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtg-tcttgt-aagtgttggtgcattccccattatcataaatac 44219086  T
Q  433 aaagtggaatata 445  Q
    ||||| |||||||    
T  44219087 aaagtagaatata 44219099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 11528993 - 11529101
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagag---aaaaatggttttaagtga 392  Q
    ||||| |||||||||  |||| | || ||||||  || ||||||||||||||| | || |||||||||||| |||||||   |||||||||||||| ||     
T  11528993 tactctctccgtcccagattaaccgagccatttgctcatttcacacatattaagaaaaatatataaatgaaagaaagagaaaaaaaatggttttaaatgc 11529092  T
Q  393 tcttgttaa 401  Q
    |||||||||    
T  11529093 tcttgttaa 11529101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 51636880 - 51636960
Alignment:
Q  363 tgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    ||||||| ||||||||||||||||||||  |||||  || ||||||||||||  ||| |||||| ||| |||||||||||||    
T  51636880 tgaaggagagagaaaaatggttttaagttgtcttgccaagtattggtgcatttaccattatcat-aattcaaagtggaatat 51636960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 2868560 - 2868520
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  2868560 aattaatattgtattgaaaagtgaaatggatcagttatttt 2868520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 445
Target Start/End: Complemental strand, 12744898 - 12744855
Alignment:
Q  402 ctattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||||||||||| | |||||||||||||| ||||    
T  12744898 ctattggtgcattctccactattagaaatgcaaagtggattata 12744855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 21296624 - 21296671
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   |||||||||| |||||||    
T  21296624 aattaatattgtattgaaaagtgaaatgactcagttatttcgagacac 21296671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 39365138 - 39365185
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||| |||||| | |||||||||||| |||||    
T  39365138 aattaatattgtattgaaaattgaaatggctcagttattttgggacac 39365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 46786102 - 46786149
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  46786102 aattaatattatattaaaaagtgaaatagctcagttattttgaaacac 46786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 369 - 475
Target Start/End: Complemental strand, 1923204 - 1923104
Alignment:
Q  369 aaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaa 468  Q
    |||||||||||||||||   |||  ||| | |||| |||||||||||| |  ||||||||||||||||| |||||   |||| |||||| ||| ||||||    
T  1923204 aaagagaaaaatggttt---gtgcccttatcaactgttggtgcattcttctttatcataaatgcaaagtagaata---tattgaattgggagtggtgaaa 1923111  T
Q  469 gtagtat 475  Q
    |||||||    
T  1923110 gtagtat 1923104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 50736250 - 50736196
Alignment:
Q  332 cttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggtttt 386  Q
    ||||||||||||||||||| || | |||||||||| |||| |||||||| |||||    
T  50736250 cttttcacacatattaaaaaaattgtataaatgaaagaaaaagaaaaatagtttt 50736196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 50776605 - 50776659
Alignment:
Q  332 cttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggtttt 386  Q
    ||||||||||||||||||| || | |||||||||| |||| |||||||| |||||    
T  50776605 cttttcacacatattaaaaaaattgtataaatgaaagaaaaagaaaaatagtttt 50776659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 36097775 - 36097824
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||| ||||||||||||||| | |||| ||||||| |||||    
T  36097775 aaaattaatattgcattgaaaagtgaaatggctcagatattttgggacac 36097824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 435
Target Start/End: Original strand, 42547054 - 42547162
Alignment:
Q  327 tttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatca 425  Q
    |||||||||||||||||||||| || || | ||||| | || || ||| |||||| ||||| | || ||||||||| ||||||||||||||    |||||    
T  42547054 tttttcttttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatg-tcttgttaagtattggtgcattctttcttatca 42547152  T
Q  426 taaatgcaaa 435  Q
    ||||||||||    
T  42547153 taaatgcaaa 42547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 43640686 - 43640727
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  43640686 aattaatattgtattgaaaagtgaaatgactcagttattttg 43640727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 53754029 - 53754130
Alignment:
Q  344 attaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    ||||||| || | ||||||||||  | ||||||||||| |||| ||||   ||| ||| |||||||||||||| |  ||||||||||| ||||| |||||    
T  53754029 attaaaaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaata 53754128  T
Q  444 ta 445  Q
    ||    
T  53754129 ta 53754130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 401
Target Start/End: Complemental strand, 12745151 - 12745048
Alignment:
Q  297 actccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatctt 396  Q
    ||||||||| ||||| |||| ||||  | |||  || ||||||||||||||| | || | | ||||||||||| ||| ||||||| ||||||||| ||||    
T  12745151 actccctccatcccggattaactgagtcttttgctcatttcacacatattaagaaaaatgt-taaatgaaggagagataaaaatgcttttaagtgctctt 12745053  T
Q  397 gttaa 401  Q
    |||||    
T  12745052 gttaa 12745048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 27153023 - 27152907
Alignment:
Q  324 cattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactat 423  Q
    ||||| ||| ||| ||| ||||||| | || |||||||||| || | | ||||||||  |||||| || | || |||| |||| ||||||||||||| ||    
T  27153023 catttgttcattttacatatattaagaaaaatatataaatgtagaagatagaaaaatatttttaaatgcttttattaaatatttgtgcattctccaccat 27152924  T
Q  424 cataaatgcaaagtgga 440  Q
    || | ||||||||||||    
T  27152923 caaatatgcaaagtgga 27152907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 39144736 - 39144684
Alignment:
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatact 447  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| |||||||||    
T  39144736 ttgttaagtattggtgcattctcctttatcatagatgtaaagtagaatatact 39144684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 295 - 474
Target Start/End: Original strand, 33190825 - 33191001
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||| | || | ||||||||||| | ||||||||||| ||||||||| ||    
T  33190825 atacttcctccgtcccaaattagctgagccattttttcttttcacacatattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgttc 33190924  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagta 474  Q
    ||||||| ||||  ||||||||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||    
T  33190925 ttgttaagtattaatgcattctccactatcataaatgcatagtggaata---tattgaattggaagttgtgaaagtagta 33191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 294 - 471
Target Start/End: Original strand, 32241339 - 32241513
Alignment:
Q  294 gatactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    |||||||| ||| || |||||||| |||  ||||||||||||||||||||||||| | || | ||||||||||||| ||| ||||||| ||||||||| |    
T  32241339 gatactccatccatcacgaattagttgagtcattttttcttttcacacatattaagacaaatgtataaatgaaggagagataaaaatgattttaagtgtt 32241438  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||||||   || | ||||||||||||||||||||    
T  32241439 cttgttaagtattgatgcattcttcactatcataaatgcaaagtggaata---taatgaattggaagttgtgaaagta 32241513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 5392239 - 5392090
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||| |||| |||| ||||||  || |||||||| |||||| | || | ||||||||||||| ||||||||||||||||||||| | |    
T  5392239 tactccctccgtcccggattaactgagccatttgctcatttcacacctattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgcttt 5392140  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||||    
T  5392139 tgtcaagtattggtgcattctccactatcataaatgcaaagtggaatata 5392090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 355 - 459
Target Start/End: Original strand, 29730872 - 29730975
Alignment:
Q  355 tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaat 454  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| |||    
T  29730872 tatataaatgaaggagagagaaaagtggttttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaagtagaatata-tattgaat 29730970  T
Q  455 tggaa 459  Q
    |||||    
T  29730971 tggaa 29730975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 44790377 - 44790488
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||| |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||||||| |    
T  44790377 tttcacacgtattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaatgta 44790476  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  44790477 aagtggaatata 44790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 33925012 - 33925118
Alignment:
Q  290 acaagatactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaag 389  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | || | ||||||||||||| |||||| | ||||||||||    
T  33925012 acaaaatactccctccatcccgaattagctgagccattttttcttttcacacatattaagacaaatgtataaatgaaggagagagaatagtggttttaag 33925111  T
Q  390 tgatctt 396  Q
    |||||||    
T  33925112 tgatctt 33925118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 45425614 - 45425526
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  45425614 tataaatgaaggagagagacaaatggttttaagtgctcttgttaagtattgatgcattttccactatcataaatgcaaagtggaatata 45425526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 39171694 - 39171584
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||  | ||||||| ||||| |||||| || |||||||||||||||    
T  39171694 tttcacacctattaaaaaaa-tatataaatgaaggagagagaaaaatggttttaagtacttttgttaagtattgatgcattatctactatcataaatgca 39171596  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  39171595 aagtggaatata 39171584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 444
Target Start/End: Complemental strand, 9014834 - 9014745
Alignment:
Q  355 tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    ||||||||||||| | ||||||||||| ||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  9014834 tatataaatgaagaagagagaaaaatgattttaagtgcttttgttaagtattgatgcattctccactatcataaatgcaaagtggaatat 9014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 28802917 - 28802808
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    |||||| |||||| | || | |||||||||| || ||||||||||||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||||    
T  28802917 tcacacgtattaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatctattctccactatcataaatgcaaa 28802818  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  28802817 gtggaatata 28802808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 5962428 - 5962539
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||||||||||   || | ||||||||||||| | |||||||  |||||||||| | ||||||| ||||||||||||||||||||| |||||||||    
T  5962428 tttcacacatattaaggaaaatgtataaatgaaggagatagaaaaaacgttttaagtgcttttgttaagtattggtgcattctccactattataaatgca 5962527  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  5962528 aagtggaatata 5962539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 31410563 - 31410674
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || |  |||||||||||| |||||||||  |||||||||| | ||||||| |||||||||||| | ||||||||||||||||    
T  31410563 tttcacacatattaagaaaaattaataaatgaaggagagagaaaaacagttttaagtgtttttgttaaatattggtgcattatacactatcataaatgca 31410662  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  31410663 aagtggaatata 31410674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 303 - 471
Target Start/End: Original strand, 37219685 - 37219853
Alignment:
Q  303 tccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaag---tgatcttgtt 399  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||||| | || | ||||||||||||| ||||||| ||| |||||||   || | |||||    
T  37219685 tccgtcccaaattagctgagtcattttttcatttcacacatattaagacaaatgtataaatgaaggagagagaaatatgattttaagtgttgttgttgtt 37219784  T
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    || ||| ||||||||||||  ||||||||||  |||||| ||||   |||||||||| ||||||||||||||    
T  37219785 aagtatgggtgcattctcccttatcataaatataaagtgaaata---tattaaattgaaagttgtgaaagta 37219853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 42412338 - 42412449
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||| |||| || |||||||||| |||||||||| |||||| |  ||||||||||||||||| |||||||||||||    
T  42412338 tttcacacatattaagaaaaatgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattctccattatcataaatgca 42412437  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  42412438 aagtggaatata 42412449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 445
Target Start/End: Original strand, 13084928 - 13085014
Alignment:
Q  359 taaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| ||| |||||| |||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  13084928 taaatgaaggagagacaaaaatagttttaagtgttcttgttaattattggtgcattctctacaatcataaatgcaaagtggaatata 13085014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 42558540 - 42558647
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||||||||| | || | |||||||||||||  |||| |||||||||||| || ||||||||| |||||||  ||||||||||||||||||||||||    
T  42558540 tcacacatattaagacaaatgtataaatgaagga--gagataaatggttttaattgttcttgttaagtattggtttattctccactatcataaatgcaaa 42558637  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  42558638 gtggaatata 42558647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 12957926 - 12958047
Alignment:
Q  325 attttttcttttcacacatattaaaataac-tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactat 423  Q
    |||| ||| ||||||||||||||||| ||  | ||||||||  ||||| ||||||||||||||||||| |||| ||| ||||| |||||||||| |||||    
T  12957926 atttgttcatttcacacatattaaaaaaaaatgtataaatgttggaaatagaaaaatggttttaagtgctcttattatctattagtgcattctcaactat 12958025  T
Q  424 cataaatgcaaagtggaatata 445  Q
    ||||||| ||||||||||||||    
T  12958026 cataaatacaaagtggaatata 12958047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 139174 - 139063
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||| || ||| ||||||| |||||| |  ||||||||| |||||||||||| ||| ||||||||||||||    
T  139174 tttcacacatattaagaaaaatgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcattttccgctatcataaatgca 139075  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  139074 aagtggaatata 139063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 7258322 - 7258433
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||| | |||||| || ||||||||||||   || |||||||||||||    
T  7258322 tttcacacttattaaaaaaaatatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcatttatcattatcataaatgca 7258421  T
Q  434 aagtggaatata 445  Q
    || | |||||||    
T  7258422 aactagaatata 7258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 364 - 475
Target Start/End: Complemental strand, 31132852 - 31132744
Alignment:
Q  364 gaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttg 463  Q
    |||||| ||||||||||| ||||||||| ||||||||| |||||||  |||||||| ||||||||||||||| |||||||   || | ||||| ||||||    
T  31132852 gaaggatagagaaaaatgattttaagtgctcttgttaagtattggtatattctccagtatcataaatgcaaaatggaata---taatcaattgaaagttg 31132756  T
Q  464 tgaaagtagtat 475  Q
    ||||||||||||    
T  31132755 tgaaagtagtat 31132744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 7042945 - 7042793
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaa-gagaaaaatggttttaagtgat 393  Q
    |||||||||||||||| |||||  |||  ||||| ||| |||||||||||| || | || | ||||||||||  ||| ||||||||||  |||||||| |    
T  7042945 atactccctccgtcccaaattaaatgagtcatttattcatttcacacatatcaagaaaaatgtataaatgaaaaaaaagagaaaaatgaatttaagtgct 7042846  T
Q  394 cttgtt-aactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| || ||||||||||||||| | ||||||||||| |||||||||||||    
T  7042845 cttgtttaagtattggtgcattctctattatcataaatgtaaagtggaatata 7042793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 22324933 - 22325021
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||||||||||  |||||||||  |||||||| |||| ||||||| |||||||||||||||| |||||||||||||    
T  22324933 tataaatgaaggagagagaaaaataattttaagtgtacttgttaaatattagtgcattttccactatcataaatgtaaagtggaatata 22325021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 38252392 - 38252504
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaa-tggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    |||||||| |||||| | || | ||||||||||||| ||||||||| | ||||||||||  |||||||| |||| |||||||||||||| |||||||||     
T  38252392 tttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcacttgttaagtattagtgcattctccactgtcataaatgt 38252491  T
Q  433 aaagtggaatata 445  Q
    |||||||||||||    
T  38252492 aaagtggaatata 38252504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 12653839 - 12653728
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||| | |||||||||| ||||||||||   ||||||| |||||||||||| |||||||| ||||||| |    
T  12653839 tttcacacgtattaagaaaaatgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtgcattatccactattataaatgta 12653740  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  12653739 aagtggaatata 12653728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 21587464 - 21587318
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||| ||||||| |||| ||||  |||||  || ||||| ||||||||| || |||  ||||||||||||| ||||||    ||||||||||| |    
T  21587464 atactcccttcgtcccggattaactgagtcatttgatcatttcatacatattaagaagaacg-tataaatgaaggagagagaa----ggttttaagtgct 21587370  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||||||||||||||| | | |||||||||||||||||||    
T  21587369 cttgttaagtattggtgcattctccactgttagaaatgcaaagtggaatata 21587318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 2195655 - 2195509
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||  ||| |||| |   |||||||||||||||||||||| || || | ||||| |||| || |||||||||| ||||| |||| ||    
T  2195655 tactccctccgtcccgttttatctgagc---tttttcttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tc 2195560  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||||||||||||    ||||||||||||||||| |||||||    
T  2195559 ttgttaagtattggtgcattctttcttatcataaatgcaaagtagaatata 2195509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 2349503 - 2349391
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaa-tggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    |||||||  |||||||| || | ||||||||||||| ||||||||| | ||||||||||   ||||||| |||| ||||||||||||||||||||||||     
T  2349503 tttcacatgtattaaaaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcatttgttaagtatttgtgcattctccactatcataaatgt 2349404  T
Q  433 aaagtggaatata 445  Q
    ||| |||||||||    
T  2349403 aaattggaatata 2349391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 32967255 - 32967343
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | |||||||||| ||||||||||  ||| |||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  32967255 tataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtccattctccactatcataaatttaaagtggaatata 32967343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 34133256 - 34133168
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||| ||||||||||  |||||||||  |||||||| |||||| |||||||||||||||||||||| ||| || ||||||    
T  34133256 tataaataaaggagagagaaaaataattttaagtgcacttgttaagtattggcgcattctccactatcataaatgtaaaatgaaatata 34133168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 29615950 - 29615839
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||| ||||||||||  |||||| ||  |||||||| |||||||| | | |||||| ||||||||| |    
T  29615950 tttcacacgtattaagaaaaatgtataaatgaaggagagagaaaaataattttaaatgcacttgttaagtattggtgtactttccactgtcataaatgta 29615851  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  29615850 aagtggaatata 29615839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 138679 - 138765
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||  |||||||||||| ||||||||| | ||||||  |||||||| ||| ||  ||||||||||||||||||||||||||    
T  138679 tataaatgaag--aagagaaaaatgattttaagtgtttttgttatgtattggtggattttcttctatcataaatgcaaagtggaatata 138765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 445
Target Start/End: Complemental strand, 3384698 - 3384575
Alignment:
Q  324 cattttttcttttcacacatattaaaataactatataaatgaag--gaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccact 421  Q
    ||||| ||| ||| ||||||||||| | || | |||||||||||  || ||||||||||||| |||| |  ||||||||  |||||||  ||||| ||||    
T  3384698 catttgttcattttacacatattaagaaaaatgtataaatgaagaagagagagaaaaatggtattaaatactcttgttatgtattggtatattcttcact 3384599  T
Q  422 atcataaatgcaaagtggaatata 445  Q
    |||||||||||||||| |||||||    
T  3384598 atcataaatgcaaagttgaatata 3384575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 475
Target Start/End: Complemental strand, 14690089 - 14689974
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||| |||| || |||||||||||||||| ||||  ||| | |||||||||||||||||    ||||||||||||||||| |||||   |||| |||||    
T  14690089 tataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattggtgcattcttttttatcataaatgcaaagtagaata---tattgaattg 14689993  T
Q  457 gaagttgtgaaagtagtat 475  Q
    | ||| |||||||||||||    
T  14689992 ggagtggtgaaagtagtat 14689974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 26677226 - 26677114
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatg-gttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||||||||| | || | ||||| |||| || ||||||||||  ||||||||||   |||| || ||||||||||||| ||| ||||||||||||    
T  26677226 tttcacacatattaagaaaaatgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaatgc 26677127  T
Q  433 aaagtggaatata 445  Q
    ||||| |||||||    
T  26677126 aaagtagaatata 26677114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15559114 - 15559196
Alignment:
Q  363 tgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||| ||||||| ||||||||| |||||| || |||||||| |||  ||| ||||||||||||||||| |||||||    
T  15559114 tgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgcaaagtagaatata 15559196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 27973641 - 27973750
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||| | |||||||  |||||||||||||||||||| |||||| || ||||| | ||||  ||| |||||||||||||    
T  27973641 tttcacacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattatcataaatgca 27973740  T
Q  434 aagtggaata 443  Q
    |||| |||||    
T  27973741 aagtagaata 27973750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 28030910 - 28031019
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||| | |||||||  |||||||||||||||||||| |||||| || ||||| | ||||  ||| |||||||||||||    
T  28030910 tttcacacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattatcataaatgca 28031009  T
Q  434 aagtggaata 443  Q
    |||| |||||    
T  28031010 aagtagaata 28031019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 447
Target Start/End: Complemental strand, 2119831 - 2119755
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatact 447  Q
    ||||||||||  ||||||||| || |||||  ||||||| |||||| || ||||||||||| |||||||||||||||    
T  2119831 agagaaaaataattttaagtgttcctgttatatattggtacattcttcattatcataaatgtaaagtggaatatact 2119755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 4274277 - 4274365
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | ||||||||||  ||||||||| | | ||||| ||| |||  ||||||| ||||||||||||||||||| ||||||    
T  4274277 tataaatgaagaagagagaaaaataattttaagtgctttcgttaaatatcggtctattctcccctatcataaatgcaaagtgaaatata 4274365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 2119702 - 2119655
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  2119702 aattaatattgtattgaaatgtgaaatagctcagttattttgggacac 2119655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 5392034 - 5391987
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5392034 aattaatattgtattgaaaagtgaaatgactcagttattttgagacac 5391987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 44615368 - 44615431
Alignment:
Q  382 gttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| ||||| | ||||||| |||||||| |||||||||||| ||||||||||||| |||||||    
T  44615368 gtttgaagtgtttttgttaagtattggtgaattctccactattataaatgcaaagtagaatata 44615431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 28791499 - 28791322
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||   ||| |||| ||| |||| | ||||||||| ||||| | || | ||||||  || || |||||||||| ||||| ||||       
T  28791499 atactccctccgtcccagtttaactgagccagttttccatttcacacagattaagaaaagtgtataaagtaaagagagagaaaaatagttttgagtgcct 28791400  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || | || |||||||||||||| |  ||||||||||| ||| | |||||||   || |||||| |||||||||||||||||    
T  28791399 ttttcaagtattggtgcattcttctttatcataaatgtaaactagaatata---ttgaattgggagttgtgaaagtagtat 28791322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 332 - 445
Target Start/End: Original strand, 40077703 - 40077816
Alignment:
Q  332 cttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    |||||||| |||||||| | || | |||||||||| || ||| ||||||| |||| ||||   |||| || |||||||||||||| |  |||||||||||    
T  40077703 cttttcactcatattaagaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatg 40077802  T
Q  432 caaagtggaatata 445  Q
     ||||| |||||||    
T  40077803 taaagtagaatata 40077816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 33743905 - 33743817
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || |||||||||||| ||| ||||  ||| | ||||||| ||||||||| |  |||||||||| |||||| |||||||    
T  33743905 tataaatgaaagagagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaatacaaagtagaatata 33743817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 443
Target Start/End: Complemental strand, 886741 - 886652
Alignment:
Q  357 tataaatgaaggaaagagaaa---aatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    ||||||||||||| ||||| |   |||||||||||  | ||||||||| |||| |||||||||||||| | ||||||||| |||| ||||    
T  886741 tataaatgaaggagagagagagagaatggttttaaacgttcttgttaagtatttgtgcattctccactgttataaatgcagagtgaaata 886652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 38252559 - 38252606
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  38252559 aattaatattgtatcaaaaagtgaaatggttcagttattttgggacac 38252606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 437
Target Start/End: Original strand, 9734159 - 9734225
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||||| ||| |||  |||| | ||||||||||||||||| |  |||||||||||||||||    
T  9734159 agagaaaaatggatttgagtattcttatcaactattggtgcattcttctttatcataaatgcaaagt 9734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 10728919 - 10728988
Alignment:
Q  375 aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||| |||| ||||||||| |||| |||||||||    |||||||||||||||||||||||||    
T  10728919 aaaaatagttttgagtg-tcttgttaagtatttgtgcattctttcttatcataaatgcaaagtggaatata 10728988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 14748698 - 14748772
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||| ||| |||| |||| | ||||||| ||||||||| |  ||||||||||||||||| |||||||    
T  14748698 agagaaatatgggtttgagtgctcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatata 14748772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 440
Target Start/End: Original strand, 26570107 - 26570213
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||| ||||||||| ||||  |||||| ||||  | ||||| ||||  |||| |||||| |||| || ||||| |||||||  || |||||||||||||    
T  26570107 tttcatacatattaagataaaaatataagtgaataagagagagaaataattttgagtgattttgtcaagtattgatgcattcgtcattatcataaatgca 26570206  T
Q  434 aagtgga 440  Q
    |||||||    
T  26570207 aagtgga 26570213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 29567189 - 29567144
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||    
T  29567189 aattaatactgtattgaaaagtgaaataggt-agttattttgagaca 29567144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 527
Target Start/End: Complemental strand, 33826223 - 33826181
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||||  ||| |||||||    
T  33826223 aaaattaatattgtattgaaaagtgaaataagtcaattatttt 33826181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 38908812 - 38908766
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||| |||||||||||||||||||||||| ||| || ||||||||||    
T  38908812 aattgatattgtattgaaaagtgaaatagatcaatttttttgagaca 38908766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 444
Target Start/End: Complemental strand, 39416501 - 39416352
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||  || ||||| |||  ||||| ||| |||||||| |||||| | || |||||||| |||  | ||| ||| ||| ||||||||| |     
T  39416501 atactccctccgtttcggattaggtgagtcatttgttcatttcacacgtattaagaaaaatatataaa-gaaaaagagataaagatgattttaagtgttt 39416403  T
Q  395 ttgttaac-tattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    ||| |||  |||| |||||||||| | ||||||||||||||| ||||||||    
T  39416402 ttgataaagtatttgtgcattctctaatatcataaatgcaaattggaatat 39416352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 27868318 - 27868391
Alignment:
Q  372 gagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||||| ||| |||||| || ||||| | ||||   || ||||||||||||||||| |||||||    
T  27868318 gagaaaaatggttttacgtgttcttgtcaagtattgatccatttatcattatcataaatgcaaagtagaatata 27868391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Complemental strand, 29615784 - 29615743
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    |||||||||||||||||||||| ||||  |||||||||||||    
T  29615784 aattaatattgtattgaaaagtaaaatgattcagttattttg 29615743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 33191030 - 33191071
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  33191030 aattaatattgtattgaaaagtgaaatgactcagttattttg 33191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 37459436 - 37459364
Alignment:
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||||| || ||||| |  ||||||||||||||||| |||||   ||||||||||| ||| |||||||||||||    
T  37459436 aactattgatgtattcttctttatcataaatgcaaagttgaata---tattaaattgggagtggtgaaagtagtat 37459364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 4480448 - 4480531
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    |||||||||| || ||||||||||  |||||| |  | ||||||  ||||||||||||||||| |||||||||  ||||||||||    
T  4480448 tataaatgaaagagagagaaaaata-ttttaaatacttttgttatgtattggtgcattctccagtatcataaacacaaagtggaa 4480531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 441
Target Start/End: Original strand, 5423122 - 5423226
Alignment:
Q  337 cacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaag 436  Q
    |||||||||||| |||| |  |||| |||| || ||||||||||| |||| ||||  ||||| ||  ||||||| |||  ||| |||||||||| |||||    
T  5423122 cacacatattaagataaatgcataagtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaag 5423221  T
Q  437 tggaa 441  Q
    |||||    
T  5423222 tggaa 5423226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 22490472 - 22490432
Alignment:
Q  405 ttggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||| ||||||||||||| ||||||||||||||    
T  22490472 ttggtggattcttcactatcataaatacaaagtggaatata 22490432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 26570280 - 26570320
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  26570280 aattaatattgtattgaaaagtgaaatgaatcagttatttt 26570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 29638453 - 29638401
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggtttt 386  Q
    ||||||||| ||||| | || | |||||||||| |||||||||||||||||||    
T  29638453 tttcacacagattaagaaaagtgtataaatgaaagaaagagaaaaatggtttt 29638401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 29730989 - 29731029
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  29730989 aattaatattgtattgaaaagtgaaatgactcagttatttt 29731029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 32241545 - 32241585
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  32241545 aattaatattgtattgaaaagtgaaataactcatttatttt 32241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 33925130 - 33925177
Alignment:
Q  425 ataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||||||||||||||||   |||| ||||| ||||||||||||||||||    
T  33925130 ataaatgcaaagtggaata---tattgaattgaaagttgtgaaagtagtat 33925177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 45420917 - 45420997
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||| |||| || |||||||||||| ||| ||||  ||||| |||| |||| ||||||| |  |||||||||||||||||    
T  45420917 tataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcataaatgcaaagt 45420997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 296 - 471
Target Start/End: Original strand, 18849676 - 18849848
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||||||||||| | |||||||||  ||||||||||||||| | || | ||||||||||||| | ||||| ||||||||||||| |||    
T  18849676 tactccctccgtcccgaattagctaagccatttttttatttcacacatattaagacaaatgtataaatgaaggagaaagaaatatggttttaagtgctct 18849775  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||   |||| ||||||||||||||||||||    
T  18849776 tgttaagtattggtgcattctccactatcataaatgcaaagtgaaata---tattgaattggaagttgtgaaagta 18849848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 4360342 - 4360474
Alignment:
Q  313 attagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgca 412  Q
    |||| |||| |||||| ||| ||||||||||||||| | ||   |||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||    
T  4360342 attaactgagccatttgttcatttcacacatattaagaaaaaagtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgca 4360441  T
Q  413 ttctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| ||||||||||||||||||||||    
T  4360442 ttctccactagcataaatgcaaagtggaatata 4360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 471
Target Start/End: Original strand, 16493215 - 16493385
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| | ||||||| || || ||| ||||||||||||||||| | |    
T  16493215 tactccctccttcccgaattagctgagccattttttcatttcacacatattaagataaatgtataaataaaagagagaaaaaaatggttttaagtgtttt 16493314  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    || ||| |||| ||||||||||  ||||||| ||||||||||||||||   |||| ||||||||||| ||||||||    
T  16493315 tg-taagtatttgtgcattctcagctatcat-aatgcaaagtggaata---tattgaattggaagttatgaaagta 16493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 42024118 - 42024294
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||| |||| |||| ||||||  ||   ||||||||||||| | || | ||||||||||||| |||||||||||||||||| |  |||    
T  42024118 tactccctccgtcccggattaactgagccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaactactct 42024217  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||||   |||| ||||||||||  ||||||||||||    
T  42024218 tgttaagtattggtctattctccactattataaatgcaaagtggaata---tattgaattggaagtgatgaaagtagtat 42024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 22872303 - 22872454
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc- 394  Q
    ||||||||||||||| |||||  ||| ||||||  || ||||||||||||||| | || | ||||| ||||| | ||||||||||||||||||||| ||     
T  22872303 tactccctccgtcccaaattaagtgagccatttgctcatttcacacatattaagaaaaatgtataagtgaagaagagagaaaaatggttttaagtgctcg 22872402  T
Q  395 -ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
     |||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  22872403 tttgtcaagtattggtgcattctccattatcataaatgcaaagtggaatata 22872454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 283393 - 283543
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||||||||||| |||| ||||  |||||| || ||||| ||||||||| ||| ||  ||||||||||||| |||||||||| |||||||||| |    
T  283393 atactccctccgtcccggattaactgagtcattttctcatttcatacatattaataatgacg-tataaatgaaggagagagaaaaattgttttaagtgct 283491  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| |||| |||||||||||||||| | |||| ||||||||||||||    
T  283492 cttgttaagtatttgtgcattctccactattagaaattcaaagtggaatata 283543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 31862977 - 31862830
Alignment:
Q  298 ctccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttg 397  Q
    |||||||||| || |||||| ||| | |||||||| ||||||||||||||||| || | ||| |||||||||  ||||||||||||||||| |  |||||    
T  31862977 ctccctccgttccaaattagttgagctattttttcatttcacacatattaaaacaaatgtatcaatgaaggatggagaaaaatggttttaatttctcttg 31862878  T
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| ||||| |||| ||| |||||||||| |||||||||||||||||    
T  31862877 ttaagtattgatgcactcttcactatcatagatgcaaagtggaatata 31862830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 434
Target Start/End: Complemental strand, 8295220 - 8295081
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||| ||||| |||| |||| ||||||  || ||||||||| ||||| | || | |||||||||| || |||||||||| |||||||||  ||    
T  8295220 atactccctccatcccggattaactgagccatttgctcatttcacacaaattaagaaaaatgtataaatgaaagagagagaaaaattgttttaagtcctc 8295121  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaa 434  Q
    ||| ||| ||||||||||||||||||||||||||||||||    
T  8295120 ttgataagtattggtgcattctccactatcataaatgcaa 8295081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 17237195 - 17237084
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || ||||||||||||||| |||||||||| |||||||||||| ||||||| |||| ||| |||||  |||||||||||||||    
T  17237195 tttcacacctattaagaaaaatatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattctttactatcataaatgca 17237096  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  17237095 aagtggaatata 17237084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 41710060 - 41710210
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||| ||||||| |||| | || ||||||  ||   ||||||||||||| | || | ||||||||||| | ||| ||||||||||||||||| ||    
T  41710060 atactcccttcgtcccggattaaccgagccatttgctcaaatcacacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctc 41710159  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  41710160 ttgttaattattggtctattttccactatcataaatgcaaagtggaatata 41710210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 49306737 - 49306628
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    |||||||| |||| | || | |||||||||| || ||||||||||||||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
T  49306737 tcacacattttaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaa 49306638  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  49306637 gtggaatata 49306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 445
Target Start/End: Complemental strand, 33047677 - 33047533
Alignment:
Q  301 cctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtta 400  Q
    |||||||||||||||| |||| |||||   || |||||||| |||||| | || | ||||||  ||| | ||||||||||||||||||||| | ||||||    
T  33047677 cctccgtcccgaattaactgagccattagctcatttcacacctattaagaaaaatgtataaacaaagaagagagaaaaatggttttaagtgcttttgtta 33047578  T
Q  401 actattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    | |||||||  ||||||||||||||||||| ||||||||||||||    
T  33047577 agtattggtagattctccactatcataaatacaaagtggaatata 33047533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 296 - 444
Target Start/End: Complemental strand, 41436671 - 41436523
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||  | || |||| ||| |||  ||||||||||||||||| | || | ||||| |||  || ||| ||||||||||||||||| | |    
T  41436671 tactccctccgtccctgaataactgagccagtttggcttttcacacatattaagaaaagtgtataagtgagagagagaaaaaaatggttttaagtgcttt 41436572  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    |||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  41436571 tgttatgtattggtgcattctccactatcataaatgcaaagtagaatat 41436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 43421467 - 43421318
Alignment:
Q  312 aattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgc 411  Q
    ||||||||||  ||||||||||||||||||||||||| |||| | ||||||||||| | |||||| |||| |||||       |||| || ||||||| |    
T  43421467 aattagctgagtcattttttcttttcacacatattaagataaatgtataaatgaagaagagagaacaatgatttta-------ttgtcaaatattggtac 43421375  T
Q  412 attctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||||||||||||||||||| || ||||   |||| ||||||||||||||||||||    
T  43421374 attctccactatcataaatgcaaaatgaaata---tattgaattggaagttgtgaaagta 43421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 444
Target Start/End: Complemental strand, 26185373 - 26185224
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||| |||||||  ||| | ||||  ||   |||||||||| || | || | ||||||||||||| |||||||||||||||||| |  ||    
T  26185373 atactccctccgtctcgaattaattgatctatttgctcaaatcacacatatcaagacaaatgtataaatgaaggagagagaaaaatggttttaaatactc 26185274  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    ||||||| |||||||  ||||||||||||||||||||||| |||||||||    
T  26185273 ttgttaagtattggtctattctccactatcataaatgcaacgtggaatat 26185224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 49812358 - 49812270
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| ||| |||||| ||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||    
T  49812358 tataaatgaaggagagaaaaaaatagttttaagtgcacttgttaagtattggtgcattatccactatcataaatgtaaagtggaatata 49812270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 54729462 - 54729550
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || |||||||||| |||||||||| | ||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  54729462 tataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataaatgcaaagtggaatata 54729550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 28974458 - 28974347
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||| |  ||| |||| |||||||||||| | ||||||| ||||||||||||||||| |||||||||||||    
T  28974458 tttcacacatattaagacaaatgtataaatgaaagggagataaaagtggttttaagtgttgttgttaagtattggtgcattctccattatcataaatgca 28974359  T
Q  434 aagtggaatata 445  Q
    ||| ||||||||    
T  28974358 aaggggaatata 28974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 39979932 - 39979821
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||| | | |||||||| ||||||||||  |||||||| ||| ||||||||||||||||||||||||| |    
T  39979932 tttcacacgtattaagaaaaatgtataaatgaagtagaaagaaaaatagttttaagtgcacttgttaagtatcggtgcattctccactatcataaatgta 39979833  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  39979832 aagtggaatata 39979821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 41203889 - 41203778
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||| | |||||||||||||| |||| ||||||||| ||||| |||||||| ||||| ||||||| ||    
T  41203889 tttcacacgtattaagaaaaatgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactaccataaataca 41203790  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  41203789 aagtggaatata 41203778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 39976310 - 39976456
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||| ||||||| |||| ||||  ||||| ||| ||||| ||||||||| || |||  ||||||||||||| ||||||    ||||||||||| |    
T  39976310 atactcccttcgtcccggattaactgagtcatttgttcatttcatacatattaagaagaacg-tataaatgaaggagagagaa----ggttttaagtgct 39976404  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||||||||||||||| | | |||||||||||||||||||    
T  39976405 cttgttaagtattggtgcattctccactgttagaaatgcaaagtggaatata 39976456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 9093747 - 9093828
Alignment:
Q  364 gaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| |||||||||| ||||||||||  |||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  9093747 gaaggagagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactatcataaatgtaaagtggaatata 9093828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 42185713 - 42185862
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||| ||| ||||||| |||| ||||||||||| |||   ||| ||||||||| | || | ||||||||||||| | ||||||||| ||||||||| |||    
T  42185713 tacttccttcgtcccggattaactgaaccatttgttcaaatcatacatattaagacaaatgtataaatgaaggagatagaaaaatgattttaagtgctct 42185812  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| |||||||  ||| ||||||||||||||| ||| ||| ||||||    
T  42185813 tgttaagtattggtctattatccactatcataaatacaaggtgaaatata 42185862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 27977259 - 27977188
Alignment:
Q  374 gaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  27977259 gaaaaatgattttaagtgtttttgttaagtattggtgcattctccactattataaatgcaaagtggaatata 27977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 49448988 - 49448890
Alignment:
Q  339 cacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||| | || | ||||| ||||||| ||||||||||||||||||||| |||||| || |||| |||||||||| | |||||||||||||||||    
T  49448988 cacatattaagaaaaatgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatcataaatgcaaagt 49448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 435
Target Start/End: Complemental strand, 4357754 - 4357618
Alignment:
Q  299 tccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgt 398  Q
    |||||| ||||||||||| ||||  ||||   || ||||| | ||||||| | || ||||||||||||||| ||||||| ||| ||||||||| | ||||    
T  4357754 tccctctgtcccgaattaactgagtcattgactcatttcatatatattaagaaaaatatataaatgaaggagagagaaagatgattttaagtgtttttgt 4357655  T
Q  399 taactattggtgcattctccactatcataaatgcaaa 435  Q
    ||| |||||||| ||||| ||||||||||||| ||||    
T  4357654 taagtattggtggattcttcactatcataaatacaaa 4357618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 42544324 - 42544250
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| ||||| ||||||||| ||||||||| |||| ||  ||||||||||||||||||||||||||||||||||    
T  42544324 agagagaaatgattttaagtgctcttgttaagtattagtctattctccactatcataaatgcaaagtggaatata 42544250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 38977121 - 38977032
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgca-ttctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| | |||||||||| ||||||||||  ||| |||| |||||||||| |||||| |||||||||||| |||||||||||||    
T  38977121 tataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtgcatttctcccctatcataaatgtaaagtggaatata 38977032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 50328068 - 50328137
Alignment:
Q  376 aaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||  ||||| || ||||||||||||| |||||||||||||||||||||| ||||||    
T  50328068 aaaatggttttaagtgtacttgtcaagtattggtgcattcaccactatcataaatgcaaagtgaaatata 50328137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 30568792 - 30568700
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattc----tccactatcataaatgcaaagtggaatata 445  Q
    |||||| |||||||||||||||||||||||||||| | ||||||| |||| ||||||||    ||  ||||||||||||||||||| ||||||    
T  30568792 tataaaggaaggaaagagaaaaatggttttaagtgttattgttaagtattagtgcattcattctctgctatcataaatgcaaagtgaaatata 30568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 437
Target Start/End: Complemental strand, 34021189 - 34021086
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||| | | || | ||||||| ||||| ||||||||||  |||| |||| |||||||   ||||||||||||||| |||||||||||||||    
T  34021189 tttcacacatattgagacaaatgtataaataaaggagagagaaaaataattttcagtgttcttgttcggtattggtgcattctctactatcataaatgca 34021090  T
Q  434 aagt 437  Q
    ||||    
T  34021089 aagt 34021086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 35909528 - 35909639
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||||| |||||| ||||||  |||||||||   ||||||| |||||||||||| |||||||| ||||||| |    
T  35909528 tttcacacgtattaagaaaaatgtataaatgaatgaaagataaaaataattttaagtgtatttgttaagtattggtgcattttccactattataaatgta 35909627  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  35909628 aagtgaaatata 35909639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 43334978 - 43335089
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||||||||| | || ||||||||  ||||||||| |||||| || |||| |||||||||||| |||  |||||| |    
T  43334978 tttcacacatattaagaaaaatgtataaatgaatgtaatagaaaaataattttaagtgttcttgtcaaatattagtgcattctccattattttaaatgga 43335077  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  43335078 aagtggaatata 43335089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 1796224 - 1796286
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactat 357  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  1796224 atactctctccgttccgaattagctgagccattttttcttttcacacatattaagacaactat 1796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 1825201 - 1825314
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattgg--tgcattctccactatcataaatg 431  Q
    ||||||||||||||| | || | ||||||| ||||| | |||||||| ||||||||||  |||||||| |||| |  ||||||||| ||| |||||||||    
T  1825201 tttcacacatattaagaaaaatgtataaataaaggagatagaaaaatagttttaagtgcacttgttaagtattagtatgcattctcaactttcataaatg 1825300  T
Q  432 caaagtggaatata 445  Q
     |||||||||||||    
T  1825301 taaagtggaatata 1825314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 3686161 - 3686052
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagag--aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    |||||||||||   || ||||||||||||||| | ||  |||||  |||||||||  | ||||||| ||||||||||||||||||||| |||||||||||    
T  3686161 acacatattaaggaaaatatataaatgaaggagataggaaaaaaaagttttaagtacttttgttaagtattggtgcattctccactattataaatgcaaa 3686062  T
Q  436 gtggaatata 445  Q
    || |||||||    
T  3686061 gttgaatata 3686052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 8065644 - 8065574
Alignment:
Q  375 aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||||||||  |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  8065644 aaaaatagttttaagtgcacttgttaagtattggtgcattctctactatcataaatgtaaagtggtatata 8065574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 6506091 - 6506176
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    |||||||||||| | |||||| ||||||||| |  | ||||||| |||| |||||||||| ||||||||||||||||| |||||||    
T  6506091 ataaatgaaggagaaagaaaattggttttaaatatttttgttaaatatttgtgcattctctactatcataaatgcaaaatggaata 6506176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 38160130 - 38160218
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||| |||||||||| ||||||||||   |||| || ||||| ||||||||||| |||||||||| ||||||| ||||||    
T  38160130 tataaataaaggagagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatcataaatacaaagtgaaatata 38160218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 39258225 - 39258338
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaa---ctattggtgcattctccactatcataaat 430  Q
    ||||||||||||||||| || | ||||| |||| || |||||||| || ||||||||| |||||||||   ||||| |||||||||  ||||||||||||    
T  39258225 tttcacacatattaaaaaaaatgtataagtgaatgagagagaaaa-tgattttaagtgctcttgttaagcactattcgtgcattctttactatcataaat 39258323  T
Q  431 gcaaagtggaatata 445  Q
    | ||| |||||||||    
T  39258324 gtaaaatggaatata 39258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 37309826 - 37309747
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||| || || |||||||||||  ||||| || ||||||||| ||||| ||||||||| |||||||||||||||||||    
T  37309826 ataaataaatgagagagaaaaatgactttaattgttcttgttaagtattgatgcattctctactatcataaatgcaaagt 37309747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 475
Target Start/End: Original strand, 1796282 - 1796335
Alignment:
Q  419 actatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  1796282 actatcataaatgcaaagtggaata---tattgaattggaagttgtgaaagtagtat 1796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 4727651 - 4727562
Alignment:
Q  355 tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||||| ||||||||||| ||| || || ||||||||| ||||| |||||| |||| ||||||||||||||| | |||||||    
T  4727651 tatataattgaaggagagagaaaaatgatttaaa-tgttcttgttaaatattgatgcattttccattatcataaatgcaaattagaatata 4727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 18509956 - 18509882
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||  ||||||||  ||||||||| |||||||||||| || |||| ||||||| ||||||||||||||    
T  18509956 agagaaaaatatttttaagtattcttgttaagtattggtgcattatctactaacataaatacaaagtggaatata 18509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 48740603 - 48740561
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  48740603 tattggtgcattctccactatcataaatgtaaagtggaatata 48740561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 447
Target Start/End: Complemental strand, 21241017 - 21240932
Alignment:
Q  363 tgaaggaaagagaaaaa-tggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatact 447  Q
    ||||||| ||||||||| | |||||||||| |||||| || |||||||  |||| ||| |||||||||||||||||| ||||||||    
T  21241017 tgaaggagagagaaaaaatagttttaagtgctcttgtcaagtattggtcaattcaccattatcataaatgcaaagtgaaatatact 21240932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 475
Target Start/End: Complemental strand, 25149644 - 25149465
Alignment:
Q  294 gatactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||||||||||| | ||| ||||   | ||||  |||||||||| ||||| | || | |||||   || || |||||||||| ||||| ||||      
T  25149644 gatactccctccgtcccaatttaactgagttaattttctttttcacacagattaagaaaagtgtataacgaaaagagagagaaaaatagttttgagtgcc 25149545  T
Q  394 cttgttaactattggtgcattc-tccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
     || |||| ||||||||||||| ||   ||||||||||| |||||||||||||   || ||||||||||||||||||||||||    
T  25149544 ttttttaagtattggtgcattcctcttttatcataaatgtaaagtggaatata---ttgaattggaagttgtgaaagtagtat 25149465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 38320040 - 38319952
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| || |||||||||||| ||| ||||  ||| | ||||||||||||||||| |  ||||||||||||||||| |||||||    
T  38320040 tataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatata 38319952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 45290184 - 45290085
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| | || | ||||||| ||||| || ||||||| |||||||||| | || | || |||||||| ||||||||||||| ||||||||||||    
T  45290184 acacatattaagaaaaatgtataaataaaggagagggaaaaatagttttaagtgctattct-aagtattggtgtattctccactatcgtaaatgcaaagt 45290086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 44633347 - 44633171
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||   ||| |||| ||| |||| | ||||||||| ||||| |||| | ||||||  || ||||||||||||| ||||| ||||       
T  44633347 atactccctccgtcccagtttaactgagccaattttccatttcacacagattaagataagtgtataaagaaaagaaagagaaaaatagttttgagtgtct 44633248  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||| || |||||||||||||| |  ||| ||||||| ||||| ||    | |||| ||||| |||| |||||||||||||    
T  44633247 ttgtcaagtattggtgcattcttctttatgataaatgtaaagtaga----aatattgaattgaaagtggtgaaagtagtat 44633171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 534
Target Start/End: Complemental strand, 45290019 - 45289976
Alignment:
Q  491 aatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  45290019 aatattgtactgaaaagtgaaataattcagttattttgagacac 45289976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 26799208 - 26799282
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| | |||||||| |||| |||| ||||| || ||| |||||||||||||||||||| | |||||||    
T  26799208 agagaaaaatagatttaagtgttctttttaagtattgatgtattttccactatcataaatgcaaaatagaatata 26799282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 436
Target Start/End: Complemental strand, 28330986 - 28330844
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    ||||||||||||||||   ||| |||| |||||   || |||||||| |||||| || || | ||||| |||| || |||||||||||| ||| ||||      
T  28330986 atactccctccgtcccattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcc 28330887  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaag 436  Q
    ||| | ||||||||||||||||| |  ||||||||||||||||    
T  28330886 cttatcaactattggtgcattcttctttatcataaatgcaaag 28330844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 443
Target Start/End: Original strand, 40881182 - 40881256
Alignment:
Q  369 aaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaata 443  Q
    |||||||||||| ||||||| |    ||||||| ||||| || |||||||||||||||||||| |||||||||||    
T  40881182 aaagagaaaaatagttttaattacatttgttaaatattgatgtattctccactatcataaatgtaaagtggaata 40881256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 51527501 - 51527459
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  51527501 tattggtgcattctccactatcataaatgtaaagtgaaatata 51527459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 41371249 - 41371314
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaa 401  Q
    ||||||||||||| | || |||||||||||||||  || |||||| |||||||||| |||||||||    
T  41371249 tcacacatattaagacaaatatataaatgaaggagtgaaaaaaatagttttaagtgctcttgttaa 41371314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 9778881 - 9778945
Alignment:
Q  326 ttttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagt 390  Q
    ||||||| |||||||| |||||| | || ||||| | |||||||||||||||||| |||||||||    
T  9778881 ttttttcatttcacacttattaagaaaagtatattagtgaaggaaagagaaaaattgttttaagt 9778945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 14009612 - 14009700
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| |||||||| |||||||  |   | ||||||| ||||| || |||||||||||| ||||||||||| || ||||||    
T  14009612 tataaatgaaggagagagaaaagtggttttgtgaacttttgttaagtattgatgtattctccactattataaatgcaaaatgaaatata 14009700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 43335144 - 43335184
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  43335144 aattaatattgtattgaaaagtgaaataaatcagttatttt 43335184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 54729604 - 54729648
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgaga 531  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||    
T  54729604 aattaatattgtattggaaagtgaaatgattcagttattttgaga 54729648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 2906815 - 2906736
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcat 413  Q
    ||||||||||||||||| |  | |||||||||| || || ||||||||||||||| || | | ||||| |||||||||||    
T  2906815 tttcacacatattaaaaaatatgtataaatgaatgagagtgaaaaatggttttaaatgttttcgttaagtattggtgcat 2906736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 33047484 - 33047437
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||    
T  33047484 aattaatattgtattgaaaagtgaaatgactcagttattttgggacac 33047437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 435
Target Start/End: Original strand, 10309234 - 10309311
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||| || |||||||||||||  ||||||||| |||| |||| |||||||| ||||| |  |||||||||||||||    
T  10309234 tataaattaaagaaagagaaaaataattttaagtg-tcttcttaaatattggtgtattctgcggtatcataaatgcaaa 10309311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 13529976 - 13529911
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||||||||| |||| |||||| ||||||||||||||| |||  ||| ||||||| |||||    
T  13529976 agagaaaaatggttttgagtg-tcttgtgaactattggtgcattttcccttatgataaatgtaaagt 13529911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 36047092 - 36047166
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||| | | |||| |||| | ||||||| ||||||||| |  ||||||||||||||||| |||||||    
T  36047092 agagaaaaatgggtatgagtgctcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatata 36047166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 44020786 - 44020824
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  44020786 tattggtgcattatccactatcataaatgtaaagtggaa 44020824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 48740506 - 48740460
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||| ||||||||||||||   |||||||||||||||||    
T  48740506 aattaatattgttttgaaaagtgaaatgactcagttattttgagaca 48740460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 49812215 - 49812169
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||   |||||||||||| ||||    
T  49812215 aattaatattgtattgaaaagtgaaatgactcagttattttgggaca 49812169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 527
Target Start/End: Original strand, 51572346 - 51572388
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||||  ||| |||||||    
T  51572346 aaaattaatattgtattgaaaagtgaaataagtcaattatttt 51572388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 52677015 - 52677089
Alignment:
Q  363 tgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||| |||||||||||||| ||||||||| ||||| ||| ||||| ||||||   || ||||||||||| |||||    
T  52677015 tgaatgaaagagaaaaatgattttaagtgctcttgataagtattgatgcatttatcattatcataaatgtaaagt 52677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 468
Target Start/End: Complemental strand, 8759908 - 8759800
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    |||||||||| || |||||||||||| ||| |||   ||| | |||||||| |||||| | |  ||||||||||||||||| |||||   |||| |||||    
T  8759908 tataaatgaaagagagagaaaaatgggtttcagttcacttatcaactattgatgcatttttctttatcataaatgcaaagtagaata---tattgaattg 8759812  T
Q  457 gaagttgtgaaa 468  Q
    | ||||||||||    
T  8759811 ggagttgtgaaa 8759800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 20964309 - 20964381
Alignment:
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||||||||||||| |  |||| |||||||||||| |||||||   |  |||||||||| |||||||||||||    
T  20964309 aactattggtgcattcttctttatcgtaaatgcaaagtagaatata---tcgaattggaagtggtgaaagtagtat 20964381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 529
Target Start/End: Complemental strand, 28974292 - 28974251
Alignment:
Q  488 attaatattgtattgaaaagtgaaatagttcagttattttga 529  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  28974292 attaatattgtattgaaaagtgaaatgactcagttattttga 28974251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 533
Target Start/End: Complemental strand, 29644340 - 29644295
Alignment:
Q  488 attaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    ||||||||||||||||||||||||||   |||||||||||| ||||    
T  29644340 attaatattgtattgaaaagtgaaatgtctcagttattttgggaca 29644295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 42132899 - 42132831
Alignment:
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||| |||||||| |  ||||||||||||||||| |||||   |||| |||||||||| |||||||||    
T  42132899 aactattgatgcattcttctttatcataaatgcaaagtagaata---tattgaattggaagtggtgaaagta 42132831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 42670338 - 42670423
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctcca 419  Q
    |||||||| |||||| | || | ||||||| || || |||||||||| || |||||||  ||| |||| |||||||||||||||||    
T  42670338 tttcacacgtattaagaaaaatgtataaataaatgagagagaaaaatagtcttaagtgcacttcttaagtattggtgcattctcca 42670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 431
Target Start/End: Original strand, 47787802 - 47787899
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    |||||||| |||||| | || | ||||||||||| | ||| |||||| |||||||| |  |||||||| || || ||||| || ||||||||||||||    
T  47787802 tttcacacgtattaagaaaaatgtataaatgaagaagagataaaaatagttttaagggcacttgttaagtactgatgcatccttcactatcataaatg 47787899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 515
Target Start/End: Original strand, 18873073 - 18873101
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatag 515  Q
    |||||||||||||||||||||||||||||    
T  18873073 aattaatattgtattgaaaagtgaaatag 18873101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 19688302 - 19688262
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||| |||||||||||||||||||||||| ||| |||||||    
T  19688302 aattgatattgtattgaaaagtgaaataggtcatttatttt 19688262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 515
Target Start/End: Original strand, 20964415 - 20964443
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatag 515  Q
    |||||||||||||||||||||||||||||    
T  20964415 aattaatattgtattgaaaagtgaaatag 20964443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 29136767 - 29136851
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    ||||| |||| || |||||||||||||||||||   | |||| || ||  ||||||||| ||  |||||||||||||||||||||    
T  29136767 tataagtgaatgagagagaaaaatggttttaagcatttttgtcaagtacgggtgcattcacctttatcataaatgcaaagtggaa 29136851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 515
Target Start/End: Complemental strand, 32323650 - 32323622
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatag 515  Q
    |||||||||||||||||||||||||||||    
T  32323650 aattaatattgtattgaaaagtgaaatag 32323622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 39979766 - 39979726
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  39979766 aattaatattgtattgaaaagtgaaataactcaattatttt 39979726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 513
Target Start/End: Complemental strand, 40293541 - 40293513
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaat 513  Q
    |||||||||||||||||||||||||||||    
T  40293541 aaaattaatattgtattgaaaagtgaaat 40293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 41436467 - 41436427
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||||||||||||||| | || ||||||||    
T  41436467 aattaatattgtattgaaaagtgaaattggtcggttatttt 41436427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 49448825 - 49448785
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||| |||||||||||||||| | |||||||||||    
T  49448825 aattaatattatattgaaaagtgaaatggatcagttatttt 49448785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 50714691 - 50714623
Alignment:
Q  377 aaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| |||||||||| |||||| || || | |||||||| ||| ||||||||||  |||||||||||||    
T  50714691 aaatagttttaagtgctcttgtcaagtagtagtgcattcaccattatcataaattgaaagtggaatata 50714623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 471
Target Start/End: Complemental strand, 31265971 - 31265797
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttctt--ttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    |||||||||||||||||||||||||  | ||||||| ||  |||||||||||||| | || | ||||||||||||| |||||||||| |||||||||| |    
T  31265971 tactccctccgtcccgaattagctgggctatttttttttatttcacacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgct 31265872  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||   |||| ||||||||||||||||||||    
T  31265871 cttgttaagtattggtgcattctccactatcataaatgtaaagtggaata---tattgaattggaagttgtgaaagta 31265797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 471
Target Start/End: Original strand, 3604517 - 3604689
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||  | |||||||||  |||||||| | ||||||||||||||| | || | ||||||| || || ||||||||||||||||||||  ||    
T  3604517 atactccctccgtttcaaattagctgcgccattttt-catttcacacatattaagacaaatgtataaataaaagagagagaaaaatggttttaagttctc 3604615  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||||| ||||||||||||||||| |||  ||||||||||||||||||   |||| ||||||||||||||||||||    
T  3604616 ttgttaagtattggtgcattctccattattgtaaatgcaaagtggaata---tattgaattggaagttgtgaaagta 3604689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 298 - 467
Target Start/End: Complemental strand, 4238607 - 4238443
Alignment:
Q  298 ctccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttg 397  Q
    |||||||||||| |||||||||||  ||||||||| |||||||||||| || |||| | |||||||||| ||  |||||| || |||||||||| |||||    
T  4238607 ctccctccgtcctgaattagctgagtcattttttcatttcacacatatcaagataaatgtataaatgaaaga--gagaaatatagttttaagtgctcttg 4238510  T
Q  398 ttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaa 467  Q
    |||| |||||||||||||| |||||||||||||| |||||| |||   ||||| ||||| ||||||||||    
T  4238509 ttaagtattggtgcattcttcactatcataaatgtaaagtgaaat---ctattgaattgaaagttgtgaa 4238443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 475
Target Start/End: Complemental strand, 15081575 - 15081437
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||  |||||||||| ||||||||||  |||||||| |||| |||||||||||||||||||||| | |    
T  15081575 tttcacacgtattaagaaaaatgtataaatgaaggtgagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactatcataaacgta 15081476  T
Q  434 aagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||||||   |||| |||||||| || ||||||||||||    
T  15081475 aagtggaata---tattgaattggaaattatgaaagtagtat 15081437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 14306220 - 14306300
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtg 438  Q
    |||||||||||| | ||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  14306220 ataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtg 14306300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 14312627 - 14312707
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtg 438  Q
    |||||||||||| | ||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  14312627 ataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtg 14312707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 9755102 - 9755213
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || ||||||||||||| | |||||||||| |||||||||   | |||||| ||||||| ||||||||||||||||||||| |    
T  9755102 tttcacacgtattaagaaaaatatataaatgaagaagagagaaaaatagttttaagttcacgtgttaagtattggtacattctccactatcataaatgta 9755201  T
Q  434 aagtggaatata 445  Q
     ||| |||||||    
T  9755202 gagtagaatata 9755213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 33921386 - 33921562
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||||||||   ||| |||| ||||||  || |||| ||| |||||| | || ||||| | ||||||| |||||||||||||||| ||||   |    
T  33921386 tactccctccgtcccattttaactgagccatttgctcatttcgcacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtgtt 33921485  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| ||||||| |||||| |  ||||||||||| ||||| |||||   |||| |||||| |||||| ||||||||||    
T  33921486 tgttaagtattggtccattcttctttatcataaatgtaaagtagaata---tattgaattgggagttgtaaaagtagtat 33921562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 9354432 - 9354536
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||||||||| ||||   ||||||| ||||||| |||||| |  ||||||||||| | ||| |||||||||||| |||| | ||||||||||||    
T  9354432 agagaaaaatggttttgagtgtctttgttaaatattggtccattcttctttatcataaatgtagagtagaatatactattgaattaggagttgtgaaagt 9354531  T
Q  471 agtat 475  Q
    |||||    
T  9354532 agtat 9354536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 30063927 - 30064015
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| | |||||||  |||||||||| | || |||| |||| ||| |||||||||||| |||||||||||||||||||||    
T  30063927 tataaatgaaggagaaagaaaaaaagttttaagtgcttttattaagtatttgtgtattctccactattataaatgcaaagtggaatata 30064015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 7301072 - 7301146
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| ||||||||||   ||||||| |||| |||||||||||| ||||||||||| |||||||||||||    
T  7301072 agagaaaaatagttttaagtgtgtttgttaagtatttgtgcattctccattatcataaatgtaaagtggaatata 7301146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 34915805 - 34915879
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| ||||| ||||||||| |   ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  34915805 agagagaaatgattttaagtgtttacgttaagtattggtgcattctccattatcataaatgcaaagtggaatata 34915879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 117193 - 117120
Alignment:
Q  372 gagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||   |||||||||  ||||||||||||||||  ||||||||| ||||||||||||||    
T  117193 gagaaaaatggttttaaggactcttgttaaaaattggtgcattctccatgatcataaatacaaagtggaatata 117120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 15081409 - 15081362
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15081409 aattaatattgtattgaaaagtgaaattgttcagttattttgggacac 15081362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 15371856 - 15371956
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||||||||| |||| |||| | ||||||| ||||||||| |  ||||||||||||||||| |||||   |||| |||||| ||| ||||||||    
T  15371856 agagaaaaatggttttgagtg-tcttatcaactattagtgcattcttctttatcataaatgcaaagtagaata---tattgaattgggagtggtgaaagt 15371951  T
Q  471 agtat 475  Q
    |||||    
T  15371952 agtat 15371956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 533
Target Start/End: Complemental strand, 7359228 - 7359183
Alignment:
Q  488 attaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  7359228 attaatattgtattgaaaagtgaaatggttcagttattttgggaca 7359183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 33109525 - 33109414
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||| ||||| || |||||||||| ||||||| ||  |||||||| |||| ||||||||||||||||| | |||| |    
T  33109525 tttcacacgtattaagaaaaatgtatagatgaatgagagagaaaaatagttttaaatgcacttgttaaatatttgtgcattctccactatcgttaatgta 33109426  T
Q  434 aagtggaatata 445  Q
    || || ||||||    
T  33109425 aaatgaaatata 33109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 430
Target Start/End: Complemental strand, 4611397 - 4611325
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaat 430  Q
    ||||||||||||| |||||||| || ||||||||| | ||||||| |||||||||||| |||| || |||||||    
T  4611397 tataaatgaaggatagagaaaa-tgattttaagtgcttttgttaagtattggtgcattttccattagcataaat 4611325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 444
Target Start/End: Original strand, 8569596 - 8569702
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || | ||||| |||| || | ||||||||| ||||||||| | ||||    |||||||| |||| |||||||||||||||||    
T  8569596 tttcacacgtattaaaaaaa-tgtataagtgaatgagaaagaaaaatgattttaagtgtttttgtg---tattggtgtattcaccactatcataaatgca 8569691  T
Q  434 aagtggaatat 444  Q
    ||||| |||||    
T  8569692 aagtgaaatat 8569702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 15321204 - 15321291
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||| || |||||||| ||||||| |||| |||| | |||||||||||| |||| |  ||||||||||||||||| |||||||    
T  15321204 tataactgaaagagagagaaaattggttttcagtg-tcttataaactattggtgcgttcttctttatcataaatgcaaagtagaatata 15321291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 118032 - 117974
Alignment:
Q  319 tgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaa 378  Q
    |||| ||||| ||| ||||||||||||||||| || |||||||||||| |||||||||||    
T  118032 tgaatcatttgttcatttcacacatattaaaaaaa-tatataaatgaatgaaagagaaaa 117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 532
Target Start/End: Original strand, 34915921 - 34915968
Alignment:
Q  485 aaaattaatattgtattgaaaagtgaaatagttcagttattttgagac 532  Q
    |||||||||||| ||||||||||||||||   ||||||||||||||||    
T  34915921 aaaattaatattttattgaaaagtgaaatgactcagttattttgagac 34915968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 471
Target Start/End: Complemental strand, 4552996 - 4552927
Alignment:
Q  399 taactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||||||||||||| |  ||||||||||||||| | |||||   ||||||||||| ||| |||||||||    
T  4552996 taactattggtgcattcttctttatcataaatgcaaattagaata---tattaaattgggagtggtgaaagta 4552927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 15355689 - 15355616
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||| |||| |||| | ||||||||||||||||| |  |||||||||| |||||| |||||||    
T  15355689 agagaaaattggttttgagtg-tcttatcaactattggtgcattcttctttatcataaatccaaagtagaatata 15355616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 532
Target Start/End: Complemental strand, 31265766 - 31265721
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagac 532  Q
    |||||||||||||||||||||||||||   | ||||||||||||||    
T  31265766 aattaatattgtattgaaaagtgaaatgactaagttattttgagac 31265721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 3604721 - 3604761
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  3604721 aattaatattgtattgaaaagtgaaatgactcagttatttt 3604761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 20383825 - 20383785
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||| ||||||||||||  |||||||||||    
T  20383825 aattaatattgtattaaaaagtgaaataagtcagttatttt 20383785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 9e-44; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 296 - 471
Target Start/End: Complemental strand, 5442531 - 5442358
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccatttttt-cttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||| |||||||||| ||||||||||  |||||||| | |||||||| |||||| | || | |||||||||| || |||||||||||||||||||| |||    
T  5442531 tacttcctccgtcccaaattagctgagtcatttttttcatttcacacctattaagacaaatgtataaatgaatgagagagaaaaatggttttaagttatc 5442432  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||    
T  5442431 ttgttaagtattagtgcattctccactatcataaatgcaaagtggaata---tattgaattggaagttgtgaaagta 5442358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 46536530 - 46536381
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||||||||| ||||  |||||  || |||||||  |||||| | || | |||| |||||||||||||||||||||||||||||| |||    
T  46536530 tactccctccgtcccgaattaactgagtcatttgctcgtttcacatgtattaagaaaaatttatagatgaaggaaagagaaaaatggttttaagtgctct 46536431  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||| || ||||||||||||||||||| ||||||||||||||    
T  46536430 tgttaaatattgttgtattctccactatcataaatacaaagtggaatata 46536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 52432498 - 52432330
Alignment:
Q  300 ccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtt 399  Q
    |||| |||||| |||||||||| |||||||||||||||||||| ||||| | || | ||||||||||| | ||||||||||| ||||||||| |||||||    
T  52432498 cccttcgtcccaaattagctgagccattttttcttttcacacacattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgctcttgtt 52432399  T
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    || ||||| ||||||||  |||| |||||||| |||||| ||||   |||| ||||| ||||||||||||||    
T  52432398 aagtattgatgcattctttactaccataaatgtaaagtgaaata---tattgaattgtaagttgtgaaagta 52432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 32348409 - 32348259
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||| ||||| |||| |||| ||||||  ||   ||||||||||||| | || | ||||||||||||| ||||||||||||||||||||| ||    
T  32348409 atactccctccatcccggattaactgagccatttgctcaaatcacacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgctc 32348310  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  ||| |||||||||| |||||||||||||||||||    
T  32348309 ttgttaagtattggtctattttccactatcacaaatgcaaagtggaatata 32348259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 5040531 - 5040642
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||| | | || | |||||||||| || ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||     
T  5040531 tttcacacatatttagacaaatgtataaatgaatgagagagaaaaatggttttaggtgatcttgttaagtattgatgcattctccactatcataaatgcg 5040630  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  5040631 aagtgaaatata 5040642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 19532876 - 19532986
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || ||||||||||||||| |||||||||| ||||||||||  |||||||| ||||||| ||||||||||||||||||||| |    
T  19532876 tttcacacctattaaaaaaa-tatataaatgaaggatagagaaaaatagttttaagtgtacttgttaagtattggttcattctccactatcataaatgta 19532974  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  19532975 aagtgaaatata 19532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 45889205 - 45889315
Alignment:
Q  336 tcacacatattaaaataactatataaatgaa-ggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaa 434  Q
    ||||| ||||||| | || | |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  45889205 tcacatatattaagacaaatgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggtctattctccattatcataaatgcaa 45889304  T
Q  435 agtggaatata 445  Q
    |||||||||||    
T  45889305 agtggaatata 45889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 51749100 - 51749250
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||| ||||| ||| |||| |||| ||||||  ||   ||||| ||||||| |||| | ||||||||||||| |||||||| || ||||||||| ||    
T  51749100 atactccatccgttccggattaactgatccatttgctcaaatcacatatattaagataaatgtataaatgaaggagagagaaaactgattttaagtgttc 51749199  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||  |||||||| |||||||||||||||||||||||||    
T  51749200 ttgttaagtattggtttattctccattatcataaatgcaaagtggaatata 51749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 21304577 - 21304425
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaa--tggttttaagtga 392  Q
    |||||||||| |||||| |||| ||||  ||||| ||| ||||| ||||||||||| || | |||||| |||||| |||||||||  || ||||||||||    
T  21304577 atactccctctgtcccggattaactgagtcatttgttcatttcatacatattaaaaaaattgtataaacgaaggagagagaaaaaaatgattttaagtga 21304478  T
Q  393 tcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||  |||  |||||||||| |||||||||||||||||||| ||||||    
T  21304477 tcttgttatgtatcagtgcattctcgactatcataaatgcaaagtgaaatata 21304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 28839489 - 28839380
Alignment:
Q  336 tcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||| ||||||| | || | ||||||||||||| |||||||||| ||||||| || ||||||||| |||||||  ||||||||||||||||||||||||    
T  28839489 tcacatatattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgctcttgttaagtattggtctattctccactatcataaatgcaaa 28839390  T
Q  436 gtggaatata 445  Q
    ||||||||||    
T  28839389 gtggaatata 28839380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 334 - 438
Target Start/End: Complemental strand, 49945084 - 49944980
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||| | ||||||||||||||||||||| ||||||||| |||| ||||||||| | ||||||||||||||    
T  49945084 tttcacacatattaagaaaaatgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatcataaatgca 49944985  T
Q  434 aagtg 438  Q
    |||||    
T  49944984 aagtg 49944980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 8773434 - 8773283
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaa-tggttttaagtgat 393  Q
    ||||||||| ||||||| |||| |||| ||||||  ||  |||||||||||||| | ||   |||||||||  || ||||||||| | |||||||||| |    
T  8773434 atactcccttcgtcccggattaactgatccatttgctcaattcacacatattaagaaaaacgtataaatgatcgagagagaaaaaatagttttaagtgct 8773335  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  8773334 cttgttaagtattggtgcattctccactgtcatatatgcaaagtggaatata 8773283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 42926282 - 42926175
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| | || | |||||||||| |||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| |    
T  42926282 acacatattaagaaaaatgtataaatgaatgaaagagaaaaatgattttaagtgtttttgttaagtatcggtgcattctccactatcataaatgcaaaat 42926183  T
Q  438 ggaatata 445  Q
    | ||||||    
T  42926182 gaaatata 42926175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 3555534 - 3555622
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||| || |||||||||||||||||| | || |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  3555534 tataaatgaaggatagggaaaaatggttttaagtgctttttttaagtattggtctattctccactatcataaatgcaaagtggaatata 3555622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 46496164 - 46496059
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||||| | || |||||||||||||||  ||||||||||||||| |||| |||||||||  |||| || |||||||| |||||||||||||||||    
T  46496164 acacatattaagacaaatatataaatgaagga--gagaaaaatggttttgagtgttcttgttaaggattgatgtattctccattatcataaatgcaaagt 46496067  T
Q  438 ggaatata 445  Q
    ||||||||    
T  46496066 ggaatata 46496059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 49494119 - 49494230
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||||| || |||||||||| ||||||||||  |||||||| |||||||  |||||||||||||||||||| |    
T  49494119 tttcacacgtattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcacttgttaaatattggtcaattctccactatcataaatgta 49494218  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  49494219 aagtggaatata 49494230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 52830370 - 52830481
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||||| || | ||||||||||||| ||||||||||  |||| ||||   ||||||| |||||||||||| |||||||||||||||| |    
T  52830370 tttcacacgtattaaaaaaaatgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataaatgta 52830469  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  52830470 aagtggaatata 52830481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 445
Target Start/End: Complemental strand, 17342955 - 17342869
Alignment:
Q  359 taaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| || |||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||| ||||||| ||||||    
T  17342955 taaatgaaggagagggaaaaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatacaaagtgaaatata 17342869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 17724697 - 17724778
Alignment:
Q  361 aatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaat 442  Q
    ||||||||| |||||||||| |||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||| ||||    
T  17724697 aatgaaggagagagaaaaattgttttaagtgctcttgttaattattgatgcattctccactaccataaatgcaaagtagaat 17724778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 445
Target Start/End: Complemental strand, 8327909 - 8327758
Alignment:
Q  294 gatactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgat 393  Q
    |||||||||||||||||| |||| | ||  |||||  ||   |||||||| |||| | || | |||||||||| || ||||||||||  ||||||||| |    
T  8327909 gatactccctccgtcccggattaacggagtcatttgctcaaatcacacattttaagacaaatgtataaatgaatgagagagaaaaataattttaagtgct 8327810  T
Q  394 cttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| |||||||  ||||||| |||||||||||||||| |||||||||    
T  8327809 cttgttaagtattggtctattctcccctatcataaatgcaaaatggaatata 8327758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 32587917 - 32587806
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||||  ||||||||||  ||||||||| | ||||||| ||||| |||||| |||| |||||||||||||    
T  32587917 tttcacacatattaagaaaaatgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataaatgca 32587818  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  32587817 aagtgaaatata 32587806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 36467151 - 36467262
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||||| || |||||||||| ||||||||||  |||||||| |||||||| |||||||||||| ||||||| |    
T  36467151 tttcacacgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtggattctccactatgataaatgta 36467250  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  36467251 aagtgaaatata 36467262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 50267394 - 50267505
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | |||||||||| |  |||||||||| ||||||||||  |||||||| ||||||||||||||||| ||||||||||| |    
T  50267394 tttcacacgtattaagaaaaatgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccattatcataaatgta 50267493  T
Q  434 aagtggaatata 445  Q
    ||||| ||||||    
T  50267494 aagtgaaatata 50267505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 326 - 468
Target Start/End: Complemental strand, 36784473 - 36784335
Alignment:
Q  326 ttttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatca 425  Q
    |||||| ||||| ||||||||||  ||| ||||||||||||| | |  |||| ||| ||||| ||| ||||||||| |||| ||||||| ||||||||||    
T  36784473 tttttttttttc-cacatattaaggtaaatatataaatgaagtagaatgaaatatgattttaggtgctcttgttaagtatttgtgcattttccactatca 36784375  T
Q  426 taaatgcaaagtggaatatactattaaattggaagttgtgaaa 468  Q
    ||||||||||||| ||||   |||| |||| ||||||||||||    
T  36784374 taaatgcaaagtgaaata---tattgaatttgaagttgtgaaa 36784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 46880567 - 46880456
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | ||||||||||||| ||||||||||| |||| || | |||| |||| ||| ||||  ||||||||||||||||||| |    
T  46880567 tttcacacatattaagaaaattgtataaatgaaggagagagaaaaatgattttgagagctcttattaagtatcggtgtcttctccactatcataaatgta 46880468  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  46880467 aagttgaatata 46880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 334 - 447
Target Start/End: Complemental strand, 6787399 - 6787286
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || |||||||| ||| || |||||||||| ||||||| ||   ||||||| |||| || |||| |||||||||||||||| |    
T  6787399 tttcacacgtattaagaaaaatatataaacgaaagagagagaaaaatagttttaaatgtatttgttaaatattagtacattatccactatcataaatgta 6787300  T
Q  434 aagtggaatatact 447  Q
    ||||||||||||||    
T  6787299 aagtggaatatact 6787286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 26756105 - 26756017
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||| || |||| ||||| ||||||||||  |||||||| ||||| ||||||||||||||||||||||  |||||| ||||||    
T  26756105 tataaatgaatgagagaggaaaatagttttaagtgcacttgttaagtattgatgcattctccactatcataaatataaagtgtaatata 26756017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 27391476 - 27391388
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| ||||||| ||||||||||| ||||||||| |||| |||| ||||||| ||||  | | |||||||||||||||||||||||||    
T  27391476 tataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatttactattatcataaatgcaaagtggaatata 27391388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 48242569 - 48242657
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||  || |||||| ||||||||||  |||| ||| ||||| ||||| ||||||||||||||||| |||||||||||||    
T  48242569 tataaatgaaggagggataaaaatagttttaagtgcacttgataagtattgatgcatcctccactatcataaatgtaaagtggaatata 48242657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 51848654 - 51848761
Alignment:
Q  340 acatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactat--tggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||||| |||| | ||||||||| ||| | |||||||| |||||||||| | ||||||| |||  ||||| |||||||||||||||||||  |||||    
T  51848654 acatattaagataaatgtataaatgatggagatagaaaaatagttttaagtgctattgttaaatatattggtgtattctccactatcataaatataaagt 51848753  T
Q  438 ggaatata 445  Q
    ||||||||    
T  51848754 ggaatata 51848761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 30750059 - 30749972
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| || || |||||||||| |||||||||| | ||||||| ||||| || |||||| ||||||||||||||||||||| |||||    
T  30750059 ataaataaatgagagagaaaaatagttttaagtgcttttgttaaatattgatgtattctctactatcataaatgcaaagtggtatata 30749972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 30771510 - 30771423
Alignment:
Q  358 ataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| || || |||||||||| |||||||||| | ||||||| ||||| || |||||| ||||||||||||||||||||| |||||    
T  30771510 ataaataaatgagagagaaaaatagttttaagtgcttttgttaaatattgatgtattctctactatcataaatgcaaagtggtatata 30771423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 34814069 - 34813958
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||| | ||||||| |||||||||| |||||||||| ||||||||| |||| |||||||   || |||||||||||||    
T  34814069 tttcacacttattaagaaaaatgtattagtgaaggagagagaaaaatagttttaagtgttcttgttaagtattagtgcatttatcattatcataaatgca 34813970  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  34813969 aagtagaatata 34813958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 43895998 - 43895888
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    ||||||||||||||| | || | |||| ||||| || |||||||| | |||||| ||| | ||||||| ||||||||  |||||||||||||||||||||    
T  43895998 tttcacacatattaagaaaaatgtatagatgaaagagagagaaaa-tagttttatgtgtttttgttaagtattggtgtgttctccactatcataaatgca 43895900  T
Q  434 aagtggaatata 445  Q
    |||| |||||||    
T  43895899 aagttgaatata 43895888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 441
Target Start/End: Original strand, 13500687 - 13500792
Alignment:
Q  338 acacatattaaaataactatataaatgaaggaaaga--gaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaa 435  Q
    ||||||||||| | || | |||||||||| || |||  || ||||| ||||||||| | ||||||  |||||||||||||| ||||||||||||||||||    
T  13500687 acacatattaagaaaaatgtataaatgaatgagagaaagagaaatgattttaagtgcttttgttatgtattggtgcattcttcactatcataaatgcaaa 13500786  T
Q  436 gtggaa 441  Q
    ||||||    
T  13500787 gtggaa 13500792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 27831961 - 27831891
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    |||||||||| ||||||||||  ||||| || ||||||||||||| ||| |||||||||||||||||||||    
T  27831961 agagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaa 27831891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 28277035 - 28277105
Alignment:
Q  375 aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| ||||||||||  |||||||| ||||||||||||||||| ||||||||||| |||||| ||||||    
T  28277035 aaaaatagttttaagtgcacttgttaagtattggtgcattctccagtatcataaatgtaaagtgaaatata 28277105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 334 - 429
Target Start/End: Complemental strand, 28908241 - 28908144
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagaga--aaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaa 429  Q
    ||||||||||||||| | || | ||||||||||||| |||||  |||||| ||||||||  ||||||||| |||| ||||||||||||||||| ||||    
T  28908241 tttcacacatattaagaaaaatgtataaatgaaggagagagagaaaaatgattttaagtactcttgttaagtattagtgcattctccactatcttaaa 28908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 475
Target Start/End: Original strand, 4466072 - 4466248
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    ||||||||||||||| | |||  ||| |||||| ||| |||||||| |||||| | || ||||| | |||| || |||||||||||| ||| |||    |    
T  4466072 tactccctccgtcccaatttaattgagccatttgttcatttcacacttattaagaaaaatatattagtgaatgagagagaaaaatgggtttgagtacctt 4466171  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    |||||| ||||||| |||||| |  ||||||||||| ||||| |||||   ||||  ||||||||| |||||||||||||    
T  4466172 tgttaagtattggtccattcttctttatcataaatgtaaagtagaata---tattgtattggaagtggtgaaagtagtat 4466248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 475
Target Start/End: Original strand, 29756121 - 29756236
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||| |||| || |||||||||||| ||| ||||  ||| | ||||||||||||||||| |  ||||||||||||||||| |||||   |||| |||||    
T  29756121 tataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtagaata---tattgaattg 29756217  T
Q  457 gaagttgtgaaagtagtat 475  Q
    | ||| |||||||||||||    
T  29756218 ggagtggtgaaagtagtat 29756236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 7785227 - 7785341
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaa-agagaaaaatggttttaagtgatcttgtta--actattggtgcattctccactatcataaat 430  Q
    ||||||||||| ||| | || | ||||||||||  || |||||||||| |||||||||| | ||||||  | ||||| ||||||||||||||||||||||    
T  7785227 tttcacacatactaagaaaaatgtataaatgaaataagagagaaaaatagttttaagtgttattgttataagtattgatgcattctccactatcataaat 7785326  T
Q  431 gcaaagtggaatata 445  Q
    | |||||| ||||||    
T  7785327 gtaaagtgaaatata 7785341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 17342814 - 17342767
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17342814 aattaatattgtattgaaaagtgaaataactcagttattttgagacac 17342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 7787777 - 7787707
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaa 441  Q
    ||||| |||| |||||||||   |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  7787777 agagagaaatagttttaagtacacttgttaagtattggtgtattctccactatcataaatgtaaagtggaa 7787707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 11425786 - 11425963
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    |||||||||||||||| | |||  ||| ||||||  || ||||||   |||||| | || ||||| | ||||||| |||||||||| ||||| ||||       
T  11425786 atactccctccgtcccaatttaattgagccatttgctcatttcacgtttattaagaaaaatatattagtgaaggagagagaaaaatagttttgagtgtct 11425885  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||| ||||||| |||||| |  ||||||||||| ||||| |||||   ||||  ||||||||| |||||||||||||    
T  11425886 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaata---tattgtattggaagtagtgaaagtagtat 11425963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 445
Target Start/End: Original strand, 27932810 - 27932900
Alignment:
Q  355 tatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||| || |||||||||||  ||| ||||  ||||| ||||||||||||||||| |  ||||||||||||||||| |||||||    
T  27932810 tatataagtgaaagagagagaaaaatgcgtttgagtgtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatata 27932900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 16040198 - 16040118
Alignment:
Q  365 aaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||| |||||||||||||||||||||   ||||||| ||||||| |||||| |  ||||||||||| ||||| |||||||    
T  16040198 aaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatata 16040118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 429
Target Start/End: Complemental strand, 27698956 - 27698861
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaa 429  Q
    |||||||| |||||| | || | ||||||||||||||| | ||||||  |||||||||  | |||||| |||| |||||||||||||||| |||||    
T  27698956 tttcacacgtattaagaaaaatgtataaatgaaggaaataaaaaaataattttaagtgcacatgttaattattagtgcattctccactatgataaa 27698861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 475
Target Start/End: Original strand, 40754437 - 40754507
Alignment:
Q  402 ctattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    ||||||||||||||| |  ||||||||||||||||| |||||   ||||||||||  |||||||||||||||||    
T  40754437 ctattggtgcattcttctttatcataaatgcaaagtagaata---tattaaattgagagttgtgaaagtagtat 40754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 46536326 - 46536279
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||    
T  46536326 aattaatattgtattgaaaagtgaaatgactcagttattttgagacac 46536279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 948620 - 948654
Alignment:
Q  411 cattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||||||||||||||||||||||||||    
T  948620 cattctccactatcataaatgcaaagtggaatata 948654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 2219365 - 2219542
Alignment:
Q  295 atactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatc 394  Q
    ||||||||||||||||  ||||  |||||||||||||| ||||||||  |||||   || | |||||||||| || |||||| |||| |||| ||||       
T  2219365 atactccctccgtcccagattaattgaaccattttttcatttcacactgattaagtaaattgtataaatgaaagagagagaataatgattttgagtgtct 2219464  T
Q  395 ttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || | ||  |||| |||||||| |  ||||||||||| |||||  ||||   |||| |||||||||||||||| |||||||    
T  2219465 ttataaaagattgatgcattcttctttatcataaatgtaaagtaaaata---tattgaattggaagttgtgaacgtagtat 2219542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 2219569 - 2219615
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  2219569 aattaatattgtattgaaaagtgaaatggttcaattattttgggaca 2219615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 34877087 - 34877157
Alignment:
Q  375 aaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||| |||||||||| ||| ||||| |||| ||||||| || | ||||||||||||||||| |||||||    
T  34877087 aaaaattgttttaagtgctctggttaaatattcgtgcattttctattatcataaatgcaaagttgaatata 34877157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 10370163 - 10370244
Alignment:
Q  357 tataaatgaaggaaagagaaaaa-tggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    ||||||| ||||| ||||||||| | |||||||||| | ||||||| ||||  |||||||| ||| ||||||||||||||||    
T  10370163 tataaataaaggagagagaaaaaatagttttaagtgcttttgttaagtattaatgcattcttcaccatcataaatgcaaagt 10370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 475
Target Start/End: Original strand, 29225402 - 29225502
Alignment:
Q  372 gagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    |||||||||| |||| ||||   ||||||| ||||||||||||||    ||||||||||| ||||| |||||   |||| |||||||||| |||||||||    
T  29225402 gagaaaaatgattttgagtgcctttgttaagtattggtgcattcttttttatcataaatggaaagtagaata---tattgaattggaagtggtgaaagta 29225498  T
Q  472 gtat 475  Q
    ||||    
T  29225499 gtat 29225502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 2571522 - 2571404
Alignment:
Q  326 ttttttcttttcacacatattaa-aataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatc 424  Q
    |||||| |||||||||||||||| || || | |||||||||| || |||| ||||| ||||| |||| ||||||||| |||||||||||| |    ||||    
T  2571522 ttttttattttcacacatattaagaaaaaatgtataaatgaaagagagag-aaaatagttttgagtg-tcttgttaagtattggtgcattatttcttatc 2571425  T
Q  425 ataaatgcaaagtggaatata 445  Q
     |||||||||||| |||||||    
T  2571424 ctaaatgcaaagtagaatata 2571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 10370309 - 10370349
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  10370309 aattaatattgtattggaaagtgaaatagctcagttatttt 10370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 30903242 - 30903294
Alignment:
Q  393 tcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  30903242 tcttgttaagtatttgtgcattttccattatcataaatgcaaagtagaatata 30903294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 475
Target Start/End: Original strand, 37541092 - 37541207
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattg 456  Q
    ||||| |||| || |||||||||||||||| | ||   || | ||||||||||||||||| |  ||| ||||||| ||||| |||||   |||| |||||    
T  37541092 tataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaatgtaaagtagaata---tattgaattg 37541188  T
Q  457 gaagttgtgaaagtagtat 475  Q
    ||||| |||||||||||||    
T  37541189 gaagtggtgaaagtagtat 37541207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 8773224 - 8773177
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagacac 534  Q
    |||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  8773224 aattaatattctattgaaaaatgaaatagctcagttattttgggacac 8773177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 5442316 - 5442282
Alignment:
Q  498 tattgaaaagtgaaatagttcagttattttgagac 532  Q
    |||||||||||||||||| ||||||||||||||||    
T  5442316 tattgaaaagtgaaatagctcagttattttgagac 5442282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 475
Target Start/End: Original strand, 24131393 - 24131494
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagt 470  Q
    |||||||||||||||| | ||  ||| | |||||| |||||||||| |  |||||||||||||||||  ||||   |||| |||||| ||| ||||||||    
T  24131393 agagaaaaatggttttgaatgcccttatcaactataggtgcattcttctttatcataaatgcaaagtataata---tattgaattgggagtggtgaaagt 24131489  T
Q  471 agtat 475  Q
    |||||    
T  24131490 agtat 24131494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 26583714 - 26583668
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    ||||||||||||||||||||||||||| | ||| || ||||||||||    
T  26583714 aattaatattgtattgaaaagtgaaatgggtcaatttttttgagaca 26583668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 31798533 - 31798459
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| |||||||| ||||  ||| | ||||||||||||||| | |  ||||||||||||||||| |||||||    
T  31798533 agagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatata 31798459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 33149388 - 33149314
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||||||| ||| ||||  ||| |||| |||||||| ||||| |  ||||||||||||||||| |||||||    
T  33149388 agagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatata 33149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 36784300 - 36784258
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttga 529  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  36784300 aattaatattgtattgaaaagtgaaatgactcagttattttga 36784258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 37925239 - 37925313
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||| |||| |||| |||| | || |||||||||||| | |  ||||||||||||||||| |||||||    
T  37925239 agagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttatcataaatgcaaagtagaatata 37925313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 43895833 - 43895787
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttgagaca 533  Q
    |||||||||||||||||||||||||||   ||| |||||||||||||    
T  43895833 aattaatattgtattgaaaagtgaaatgactcatttattttgagaca 43895787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Complemental strand, 6784989 - 6784948
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    |||||||||||||||||||||||||||  |||| ||||||||    
T  6784989 aattaatattgtattgaaaagtgaaatgattcaattattttg 6784948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 14358128 - 14358169
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttg 528  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  14358128 aattaatattgtattgaaaagtgaaattgatcatttattttg 14358169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 431
Target Start/End: Original strand, 28706579 - 28706676
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatg 431  Q
    ||||||||||||||||| || | ||||||||||  | |||||||||||||||| ||||   |||| || ||||| |||||| | |  |||||||||||    
T  28706579 tttcacacatattaaaaaaaatgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaatg 28706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 38664530 - 38664442
Alignment:
Q  357 tataaatgaaggaaagagaaaaat-ggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||| ||||| |||||||||  |||||||| || | ||||||| ||  ||||||||||| ||||||||||||||||| | |||||||    
T  38664530 tataaataaaggagagagaaaaaaaggttttaa-tgtttttgttaagtaccggtgcattctctactatcataaatgcaaaattgaatata 38664442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 3160682 - 3160746
Alignment:
Q  373 agaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagt 437  Q
    |||||||||| ||| ||||  ||||| ||||||||||||||| | |  |||||||||||||||||    
T  3160682 agaaaaatgggtttgagtgcccttgtcaactattggtgcattattctttatcataaatgcaaagt 3160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 515
Target Start/End: Complemental strand, 15290476 - 15290448
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatag 515  Q
    |||||||||||||||||||||||||||||    
T  15290476 aattaatattgtattgaaaagtgaaatag 15290448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 34877211 - 34877251
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||| ||||  ||||||||||||    
T  34877211 aattaatattgtattgaaaagtaaaatgattcagttatttt 34877251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 40061962 - 40061850
Alignment:
Q  333 ttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgc 432  Q
    ||||||||| |||||||| || | |||||  |||| | ||||||||||| |||||| || |||| | || ||||| | |||| | || ||||||||||||    
T  40061962 ttttcacacttattaaaagaaatgtataagcgaagaagagagaaaaatgattttaaatgttcttatcaagtattgttacatttttcattatcataaatgc 40061863  T
Q  433 aaagtggaatata 445  Q
    ||| | |||||||    
T  40061862 aaattagaatata 40061850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 51049495 - 51049455
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    ||||||||||||||| ||||||||||||| ||| |||||||    
T  51049495 aattaatattgtattaaaaagtgaaatagctcaattatttt 51049455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 52830535 - 52830575
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttatttt 527  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  52830535 aattaatattgtattgaaaagtgaaatgactcagttatttt 52830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 301 - 475
Target Start/End: Complemental strand, 230008 - 229837
Alignment:
Q  301 cctccgtcccgaattagctgaaccatttttt-cttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgtt 399  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| |||||| | || | ||||||||||||| | ||||||||| ||||||||| |||||||    
T  230008 cctccgtcccgaagtagctgagccatttttttcttttcacacgtattaagacaaatgtataaatgaaggagatagaaaaatg-ttttaagtgctcttgtt 229910  T
Q  400 aactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagtagtat 475  Q
    || ||||||||||||||||| ||||||||||||||||||| |||   |||| ||||||||||||||||||||||||    
T  229909 aagtattggtgcattctccattatcataaatgcaaagtggtata---tattgaattggaagttgtgaaagtagtat 229837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 296 - 471
Target Start/End: Complemental strand, 230445 - 230274
Alignment:
Q  296 tactccctccgtcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatct 395  Q
    |||||||||| | || |||||||||||||| |||||| ||||||| ||||||| | || | ||||||||||| | ||||||||||||||||||||  |||    
T  230445 tactccctccattccaaattagctgaaccaatttttcatttcacatatattaagacaa-tgtataaatgaagaagagagaaaaatggttttaagtattct 230347  T
Q  396 tgttaactattggtgcattctccactatcataaatgcaaagtggaatatactattaaattggaagttgtgaaagta 471  Q
    ||||||  || ||| |||||||   ||||||||||||||| |||||||   |||| ||||||||||||||||||||    
T  230346 tgttaagcatgggtacattctctgttatcataaatgcaaaatggaata---tattgaattggaagttgtgaaagta 230274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 230243 - 230201
Alignment:
Q  487 aattaatattgtattgaaaagtgaaatagttcagttattttga 529  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  230243 aattaatattgtattgaaaagtgaaatgactcagttattttga 230201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 307 - 445
Target Start/End: Complemental strand, 99004 - 98866
Alignment:
Q  307 tcccgaattagctgaaccattttttcttttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactatt 406  Q
    ||||| |||| ||||||||||| ||| ||||||||||||||| | || | |||||||||| || ||||||||||| ||||||||| ||||| ||| ||||    
T  99004 tcccggattaactgaaccatttgttcatttcacacatattaagaaaaatgtataaatgaatgagagagaaaaatgattttaagtgctcttgataagtatt 98905  T
Q  407 ggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||| || ||||||  |||||||||||||    
T  98904 ggtgcattatccaccataataaatataaagtggaatata 98866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 9530 - 9617
Alignment:
Q  357 tataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatat 444  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||    
T  9530 tataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatgtattctccattatcataaatgcaaagtggaatat 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 445
Target Start/End: Complemental strand, 14608 - 14497
Alignment:
Q  334 tttcacacatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgca 433  Q
    |||||||| |||||| | || | ||||||||||||  ||| |||||| ||||||| ||  |||| ||| ||||| ||||||||||||| ||||||||| |    
T  14608 tttcacacgtattaagaaaaatgtataaatgaaggggagataaaaatagttttaattgcacttgctaagtattgatgcattctccactgtcataaatgta 14509  T
Q  434 aagtggaatata 445  Q
    ||||||||||||    
T  14508 aagtggaatata 14497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 445
Target Start/End: Complemental strand, 26752 - 26654
Alignment:
Q  340 acatattaaaataactatataaatgaaggaaagagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtgg 439  Q
    ||||||||| | || | ||||||||||||| |||||||||||||       | ||| ||||| |||||||  ||||||||||||||||||||||||||||    
T  26752 acatattaagacaaatgtataaatgaaggagagagaaaaatggt-------gctctggttaagtattggtctattctccactatcataaatgcaaagtgg 26660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 8970 - 8928
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  8970 tattggtgcattctccactattataaatgcaaagtggaatata 8928  T

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Target: scaffold0576 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 679 - 606
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||||||| ||||||| |||| |||| | ||||||||||||||||| |  |||||||||| |||||| |||||||    
T  679 agagaaaattggttttgagtg-tcttatcaactattggtgcattcttctttatcataaatccaaagtagaatata 606  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 26405 - 26363
Alignment:
Q  403 tattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    |||| ||||||| |||||||||||||||| |||||||||||||    
T  26405 tattagtgcattatccactatcataaatgtaaagtggaatata 26363  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 171341 - 171267
Alignment:
Q  371 agagaaaaatggttttaagtgatcttgttaactattggtgcattctccactatcataaatgcaaagtggaatata 445  Q
    ||||||||| |||||||| || |||||| || ||||||||| ||  ||| ||||||||||| ||||| |||||||    
T  171341 agagaaaaaaggttttaaatgttcttgtcaagtattggtgcgtttaccattatcataaatgtaaagtagaatata 171267  T

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