View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5790_low_16 (Length: 258)

Name: NF5790_low_16
Description: NF5790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5790_low_16
NF5790_low_16
[»] chr7 (74 HSPs)
chr7 (19-257)||(18825843-18826091)
chr7 (24-233)||(16078892-16079113)
chr7 (19-223)||(3920412-3920628)
chr7 (23-234)||(27850318-27850541)
chr7 (19-229)||(5376959-5377181)
chr7 (24-233)||(12980255-12980477)
chr7 (35-223)||(26004477-26004675)
chr7 (19-155)||(46127266-46127399)
chr7 (19-233)||(24753049-24753263)
chr7 (28-223)||(26622834-26623041)
chr7 (24-233)||(2630567-2630788)
chr7 (19-208)||(24425255-24425455)
chr7 (19-155)||(23328483-23328620)
chr7 (19-140)||(37579136-37579257)
chr7 (19-137)||(38139894-38140013)
chr7 (19-233)||(7779881-7780108)
chr7 (19-233)||(45885758-45885985)
chr7 (24-233)||(37182153-37182374)
chr7 (19-233)||(45379979-45380207)
chr7 (19-229)||(18125225-18125448)
chr7 (19-233)||(21702532-21702759)
chr7 (24-220)||(17885343-17885552)
chr7 (19-224)||(25782909-25783126)
chr7 (18-230)||(30650503-30650728)
chr7 (19-233)||(16866042-16866269)
chr7 (24-217)||(44734366-44734572)
chr7 (19-233)||(41741443-41741669)
chr7 (151-233)||(10072484-10072566)
chr7 (19-233)||(39316868-39317095)
chr7 (19-233)||(39456008-39456233)
chr7 (28-233)||(25905510-25905728)
chr7 (19-233)||(35074342-35074570)
chr7 (24-154)||(44985984-44986113)
chr7 (24-220)||(41103531-41103743)
chr7 (84-229)||(3226943-3227100)
chr7 (19-203)||(44794051-44794247)
chr7 (19-137)||(37196099-37196218)
chr7 (16-110)||(5916194-5916288)
chr7 (24-137)||(25980018-25980132)
chr7 (45-129)||(17851753-17851838)
chr7 (49-137)||(44658550-44658639)
chr7 (178-230)||(10995830-10995882)
chr7 (93-233)||(38152835-38152987)
chr7 (151-233)||(22973406-22973488)
chr7 (179-233)||(42908034-42908088)
chr7 (167-233)||(43507479-43507545)
chr7 (19-84)||(26004675-26004740)
chr7 (153-233)||(30839127-30839207)
chr7 (178-229)||(33841123-33841174)
chr7 (19-113)||(43507306-43507401)
chr7 (153-220)||(45708871-45708938)
chr7 (163-233)||(3157113-3157183)
chr7 (151-233)||(18683992-18684074)
chr7 (163-233)||(38139785-38139855)
chr7 (164-233)||(27063169-27063238)
chr7 (181-226)||(42005952-42005997)
chr7 (177-233)||(27896468-27896524)
chr7 (19-129)||(45708971-45709082)
chr7 (27-84)||(3227698-3227755)
chr7 (163-220)||(25979923-25979980)
chr7 (151-223)||(23475266-23475338)
chr7 (163-226)||(16811759-16811822)
chr7 (163-233)||(17851884-17851952)
chr7 (59-122)||(37103266-37103329)
chr7 (151-230)||(44845131-44845210)
chr7 (60-137)||(16811644-16811722)
chr7 (153-223)||(28309512-28309582)
chr7 (177-223)||(31426052-31426098)
chr7 (151-229)||(32546210-32546288)
chr7 (159-233)||(40335633-40335707)
chr7 (153-233)||(27063354-27063434)
chr7 (177-233)||(37218049-37218105)
chr7 (19-71)||(38152775-38152827)
chr7 (163-231)||(46127179-46127246)
[»] chr1 (56 HSPs)
chr1 (19-233)||(35936822-35937036)
chr1 (19-256)||(50426633-50426875)
chr1 (19-233)||(29871278-29871504)
chr1 (19-233)||(34673275-34673501)
chr1 (24-233)||(44615468-44615690)
chr1 (24-233)||(44792879-44793101)
chr1 (19-233)||(24710727-24710943)
chr1 (19-233)||(42707830-42708050)
chr1 (19-233)||(9982883-9983109)
chr1 (19-230)||(5180914-5181132)
chr1 (24-128)||(44632246-44632350)
chr1 (28-230)||(24236757-24236972)
chr1 (19-233)||(39616172-39616388)
chr1 (24-230)||(12494885-12495103)
chr1 (19-223)||(16433170-16433380)
chr1 (24-233)||(17134821-17135043)
chr1 (24-233)||(45866178-45866400)
chr1 (24-220)||(18354086-18354295)
chr1 (19-233)||(36187213-36187440)
chr1 (24-155)||(49741090-49741221)
chr1 (19-233)||(19572505-19572731)
chr1 (19-154)||(40087547-40087683)
chr1 (24-154)||(17092043-17092174)
chr1 (19-257)||(29936285-29936534)
chr1 (19-217)||(34060034-34060239)
chr1 (19-137)||(42439771-42439890)
chr1 (19-218)||(3627993-3628207)
chr1 (27-233)||(16408823-16409038)
chr1 (19-232)||(28297802-28298029)
chr1 (19-233)||(49250766-49250993)
chr1 (19-137)||(23966741-23966860)
chr1 (151-233)||(23490764-23490846)
chr1 (19-233)||(51421727-51421954)
chr1 (179-233)||(33293524-33293578)
chr1 (59-150)||(2514677-2514769)
chr1 (169-233)||(13798270-13798334)
chr1 (24-109)||(13020562-13020648)
chr1 (151-233)||(16237297-16237379)
chr1 (177-233)||(10778560-10778616)
chr1 (19-129)||(20774501-20774612)
chr1 (52-123)||(38733894-38733965)
chr1 (179-233)||(23968621-23968675)
chr1 (151-233)||(34611087-34611169)
chr1 (151-228)||(34085249-34085326)
chr1 (19-129)||(34610942-34611053)
chr1 (151-226)||(48125683-48125758)
chr1 (151-209)||(42439687-42439745)
chr1 (191-231)||(2514811-2514851)
chr1 (90-154)||(13390354-13390418)
chr1 (177-233)||(19003659-19003715)
chr1 (178-218)||(44632149-44632189)
chr1 (167-233)||(17091952-17092018)
chr1 (151-233)||(35069882-35069964)
chr1 (163-228)||(36617386-36617452)
chr1 (59-124)||(36616796-36616861)
chr1 (177-233)||(12718765-12718821)
[»] scaffold0036 (1 HSPs)
scaffold0036 (24-257)||(33267-33510)
[»] chr3 (57 HSPs)
chr3 (24-233)||(4557298-4557519)
chr3 (19-233)||(42758243-42758469)
chr3 (19-230)||(53631773-53631996)
chr3 (24-233)||(4016037-4016258)
chr3 (19-233)||(34119527-34119751)
chr3 (19-234)||(41937005-41937221)
chr3 (24-229)||(54317018-54317235)
chr3 (19-233)||(49579932-49580159)
chr3 (27-233)||(48390810-48391028)
chr3 (24-155)||(30682695-30682826)
chr3 (19-233)||(22535834-22536061)
chr3 (19-124)||(31126909-31127014)
chr3 (24-233)||(34025827-34026049)
chr3 (24-154)||(20086882-20087013)
chr3 (25-151)||(830884-831010)
chr3 (19-233)||(52572477-52572704)
chr3 (19-233)||(52198022-52198250)
chr3 (19-229)||(44172494-44172717)
chr3 (19-229)||(44179194-44179417)
chr3 (19-233)||(44252615-44252842)
chr3 (24-233)||(19111609-19111829)
chr3 (45-233)||(44639168-44639369)
chr3 (19-257)||(44953412-44953655)
chr3 (19-233)||(39728539-39728766)
chr3 (28-137)||(17146251-17146361)
chr3 (27-233)||(29842184-29842402)
chr3 (19-217)||(43582446-43582656)
chr3 (19-125)||(48306649-48306756)
chr3 (28-137)||(10823794-10823904)
chr3 (24-137)||(23580701-23580814)
chr3 (47-233)||(39655266-39655465)
chr3 (19-223)||(49025549-49025765)
chr3 (18-233)||(44106786-44107013)
chr3 (19-233)||(7469771-7469998)
chr3 (59-233)||(23154058-23154243)
chr3 (151-220)||(23546948-23547017)
chr3 (163-233)||(29284361-29284431)
chr3 (175-229)||(30616278-30616332)
chr3 (24-113)||(34154291-34154381)
chr3 (19-154)||(6738478-6738614)
chr3 (182-257)||(10371250-10371323)
chr3 (169-233)||(42243418-42243482)
chr3 (97-229)||(23910249-23910385)
chr3 (177-233)||(10043275-10043331)
chr3 (151-233)||(23580840-23580922)
chr3 (151-233)||(30904809-30904890)
chr3 (151-217)||(34154427-34154493)
chr3 (152-217)||(48305650-48305715)
chr3 (24-124)||(14208275-14208374)
chr3 (47-113)||(23547097-23547164)
chr3 (47-129)||(29284232-29284315)
chr3 (165-207)||(3385875-3385917)
chr3 (191-233)||(6738398-6738440)
chr3 (178-223)||(1337080-1337125)
chr3 (170-206)||(831040-831076)
chr3 (189-229)||(26207318-26207358)
chr3 (169-233)||(38347597-38347661)
[»] chr8 (50 HSPs)
chr8 (19-233)||(20399460-20399687)
chr8 (19-233)||(27932281-27932508)
chr8 (24-229)||(43113623-43113840)
chr8 (24-233)||(1012491-1012713)
chr8 (19-233)||(4230723-4230939)
chr8 (24-223)||(17469129-17469340)
chr8 (24-120)||(35215378-35215474)
chr8 (18-217)||(24870033-24870244)
chr8 (24-155)||(34139321-34139453)
chr8 (126-233)||(35215524-35215630)
chr8 (24-217)||(45235938-45236144)
chr8 (24-257)||(1063380-1063624)
chr8 (19-152)||(36132003-36132135)
chr8 (19-233)||(17220585-17220807)
chr8 (24-152)||(24568813-24568940)
chr8 (19-233)||(32302928-32303156)
chr8 (19-233)||(29108815-29109042)
chr8 (19-155)||(2075917-2076054)
chr8 (31-223)||(14186205-14186405)
chr8 (164-233)||(37960955-37961024)
chr8 (30-113)||(29089589-29089672)
chr8 (28-233)||(24927826-24928044)
chr8 (30-137)||(34776945-34777053)
chr8 (153-233)||(39445569-39445649)
chr8 (151-234)||(8545341-8545424)
chr8 (19-121)||(39445685-39445787)
chr8 (177-223)||(9642354-9642400)
chr8 (172-233)||(5858645-5858706)
chr8 (169-233)||(14155563-14155627)
chr8 (28-155)||(28977197-28977325)
chr8 (19-151)||(34021347-34021477)
chr8 (163-217)||(40248380-40248434)
chr8 (19-84)||(40248502-40248567)
chr8 (163-233)||(6388509-6388579)
chr8 (151-229)||(30481418-30481496)
chr8 (184-233)||(14687445-14687494)
chr8 (168-233)||(29089811-29089876)
chr8 (151-195)||(2075871-2075915)
chr8 (179-227)||(30904087-30904134)
chr8 (159-222)||(10297479-10297542)
chr8 (177-232)||(15068582-15068637)
chr8 (163-222)||(32392390-32392449)
chr8 (151-209)||(5700369-5700427)
chr8 (191-229)||(12468216-12468254)
chr8 (179-233)||(15173873-15173927)
chr8 (163-220)||(11255015-11255071)
chr8 (153-222)||(17084111-17084180)
chr8 (151-220)||(34777079-34777148)
chr8 (177-233)||(27056548-27056604)
chr8 (151-223)||(28345504-28345576)
[»] chr4 (73 HSPs)
chr4 (24-233)||(26564711-26564932)
chr4 (24-230)||(1724307-1724525)
chr4 (19-155)||(19534330-19534466)
chr4 (19-229)||(37107286-37107507)
chr4 (19-155)||(37348998-37349134)
chr4 (24-233)||(6482029-6482251)
chr4 (24-139)||(425703-425818)
chr4 (19-226)||(12825462-12825681)
chr4 (24-155)||(7985205-7985337)
chr4 (19-219)||(32596192-32596404)
chr4 (24-149)||(39188395-39188519)
chr4 (19-233)||(31752330-31752557)
chr4 (19-217)||(47550363-47550574)
chr4 (24-155)||(9230164-9230293)
chr4 (24-155)||(13770539-13770670)
chr4 (45-209)||(47239403-47239580)
chr4 (19-233)||(6382266-6382494)
chr4 (19-233)||(7608844-7609071)
chr4 (24-137)||(42774640-42774754)
chr4 (24-129)||(28695252-28695357)
chr4 (16-113)||(29755456-29755553)
chr4 (19-220)||(48459355-48459569)
chr4 (19-220)||(5902621-5902835)
chr4 (25-233)||(39375160-39375379)
chr4 (153-233)||(11028094-11028174)
chr4 (19-154)||(39046827-39046962)
chr4 (18-233)||(44317407-44317636)
chr4 (19-209)||(32585362-32585566)
chr4 (19-233)||(43893102-43893328)
chr4 (18-233)||(11122863-11123091)
chr4 (19-233)||(31918552-31918780)
chr4 (24-230)||(42299670-42299886)
chr4 (151-233)||(55826617-55826699)
chr4 (28-233)||(21423744-21423962)
chr4 (177-229)||(43309528-43309580)
chr4 (25-107)||(15987372-15987455)
chr4 (151-233)||(4741210-4741292)
chr4 (151-233)||(15987256-15987338)
chr4 (151-233)||(25941157-25941239)
chr4 (152-229)||(19883054-19883131)
chr4 (24-129)||(4766422-4766529)
chr4 (28-123)||(11027955-11028051)
chr4 (191-231)||(12505537-12505577)
chr4 (50-155)||(13015335-13015446)
chr4 (151-223)||(29527831-29527903)
chr4 (163-231)||(41914992-41915060)
chr4 (185-228)||(4737901-4737944)
chr4 (51-122)||(24637078-24637149)
chr4 (151-233)||(10302103-10302185)
chr4 (151-233)||(14605919-14606001)
chr4 (163-233)||(33615323-33615393)
chr4 (191-233)||(37349171-37349213)
chr4 (163-229)||(39046983-39047049)
chr4 (151-229)||(47103757-47103835)
chr4 (161-222)||(36306814-36306875)
chr4 (175-207)||(3737819-3737851)
chr4 (50-129)||(55826734-55826814)
chr4 (178-233)||(7985119-7985174)
chr4 (163-226)||(16575143-16575206)
chr4 (178-233)||(45065295-45065350)
chr4 (153-195)||(19534476-19534518)
chr4 (151-233)||(21956808-21956890)
chr4 (191-233)||(37246904-37246946)
chr4 (188-233)||(1724263-1724308)
chr4 (179-232)||(1866544-1866597)
chr4 (160-233)||(39086185-39086258)
chr4 (179-223)||(11173020-11173064)
chr4 (177-217)||(15733536-15733576)
chr4 (179-219)||(19548945-19548985)
chr4 (45-121)||(29035684-29035759)
chr4 (45-121)||(29047817-29047892)
chr4 (163-223)||(31782644-31782704)
chr4 (165-233)||(36919156-36919224)
[»] chr6 (44 HSPs)
chr6 (35-233)||(12678087-12678297)
chr6 (19-155)||(14032425-14032561)
chr6 (19-223)||(14505955-14506171)
chr6 (19-223)||(24602859-24603075)
chr6 (28-257)||(24225575-24225815)
chr6 (18-233)||(5863376-5863604)
chr6 (19-233)||(2367194-2367421)
chr6 (19-233)||(10142511-10142738)
chr6 (24-133)||(7393992-7394101)
chr6 (19-112)||(14410959-14411052)
chr6 (28-233)||(27534561-27534779)
chr6 (19-233)||(32853712-32853939)
chr6 (24-129)||(30816131-30816236)
chr6 (18-233)||(12141252-12141480)
chr6 (151-229)||(32532553-32532631)
chr6 (45-230)||(27738666-27738864)
chr6 (47-139)||(11762342-11762434)
chr6 (24-253)||(12309452-12309685)
chr6 (24-114)||(14245121-14245211)
chr6 (151-233)||(28079689-28079771)
chr6 (24-129)||(14254832-14254937)
chr6 (153-230)||(20349079-20349156)
chr6 (151-223)||(14410858-14410930)
chr6 (19-137)||(10188174-10188293)
chr6 (19-233)||(3483916-3484143)
chr6 (169-233)||(30986284-30986348)
chr6 (163-233)||(9442455-9442525)
chr6 (163-229)||(18908918-18908984)
chr6 (163-233)||(256485-256555)
chr6 (163-233)||(15498349-15498419)
chr6 (180-233)||(10188073-10188126)
chr6 (163-220)||(32053113-32053170)
chr6 (163-230)||(13769097-13769164)
chr6 (52-122)||(29200024-29200094)
chr6 (177-230)||(20610978-20611031)
chr6 (19-84)||(32532432-32532497)
chr6 (153-233)||(9458678-9458758)
chr6 (166-218)||(11762473-11762525)
chr6 (151-223)||(29199888-29199960)
chr6 (151-223)||(32959873-32959945)
chr6 (179-230)||(32054220-32054271)
chr6 (163-208)||(34178347-34178392)
chr6 (178-222)||(9402628-9402672)
chr6 (163-223)||(14034527-14034587)
[»] chr2 (47 HSPs)
chr2 (19-223)||(6027892-6028109)
chr2 (19-233)||(37106568-37106788)
chr2 (24-233)||(31942178-31942400)
chr2 (19-257)||(13705332-13705581)
chr2 (19-230)||(14540655-14540874)
chr2 (19-233)||(19104830-19105060)
chr2 (24-233)||(12193820-12194042)
chr2 (19-232)||(37999352-37999578)
chr2 (24-233)||(7314641-7314863)
chr2 (24-204)||(16226759-16226941)
chr2 (19-233)||(13830605-13830831)
chr2 (19-233)||(8915931-8916157)
chr2 (24-228)||(45256697-45256914)
chr2 (18-233)||(10208423-10208651)
chr2 (19-137)||(10920514-10920633)
chr2 (26-233)||(44746102-44746322)
chr2 (19-233)||(24414125-24414352)
chr2 (151-233)||(37472752-37472834)
chr2 (19-217)||(45115427-45115638)
chr2 (19-233)||(30846814-30847042)
chr2 (19-113)||(37472854-37472949)
chr2 (19-137)||(42798090-42798209)
chr2 (28-137)||(18106191-18106301)
chr2 (19-229)||(9632255-9632478)
chr2 (178-232)||(15546785-15546839)
chr2 (151-233)||(35248378-35248460)
chr2 (28-129)||(36128216-36128318)
chr2 (143-233)||(37309737-37309826)
chr2 (177-232)||(22900834-22900889)
chr2 (24-70)||(37319816-37319862)
chr2 (151-233)||(24051617-24051699)
chr2 (177-230)||(10212446-10212499)
chr2 (164-233)||(36128099-36128168)
chr2 (185-233)||(12341648-12341696)
chr2 (163-223)||(25210403-25210463)
chr2 (151-203)||(42798011-42798063)
chr2 (154-233)||(35510436-35510515)
chr2 (178-233)||(40734577-40734632)
chr2 (163-233)||(26755766-26755836)
chr2 (163-233)||(33175255-33175325)
chr2 (151-233)||(38342512-38342594)
chr2 (163-233)||(43371579-43371649)
chr2 (151-231)||(3547180-3547260)
chr2 (61-101)||(17598816-17598856)
chr2 (59-122)||(26755639-26755703)
chr2 (185-229)||(34214654-34214698)
chr2 (147-223)||(35409170-35409246)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-155)||(197410-197552)
[»] chr5 (67 HSPs)
chr5 (19-155)||(3573093-3573229)
chr5 (24-233)||(18206891-18207113)
chr5 (19-146)||(2985016-2985143)
chr5 (24-155)||(27088436-27088566)
chr5 (24-202)||(35194014-35194204)
chr5 (19-233)||(20973490-20973706)
chr5 (19-155)||(30115352-30115488)
chr5 (19-233)||(4582987-4583214)
chr5 (24-223)||(12447255-12447466)
chr5 (19-233)||(30996465-30996691)
chr5 (24-153)||(33862270-33862398)
chr5 (24-223)||(38006473-38006684)
chr5 (24-152)||(42717719-42717847)
chr5 (19-151)||(2412814-2412946)
chr5 (19-233)||(4920694-4920921)
chr5 (19-209)||(35311691-35311893)
chr5 (19-233)||(40517674-40517901)
chr5 (19-233)||(42987473-42987700)
chr5 (19-137)||(3564830-3564948)
chr5 (24-233)||(17853287-17853507)
chr5 (19-154)||(1218625-1218759)
chr5 (19-233)||(6155914-6156139)
chr5 (19-155)||(22694985-22695122)
chr5 (24-154)||(28045528-28045660)
chr5 (19-137)||(29246053-29246172)
chr5 (19-233)||(5908682-5908909)
chr5 (24-233)||(15890080-15890301)
chr5 (19-154)||(13402088-13402223)
chr5 (19-233)||(12834568-12834796)
chr5 (151-233)||(28569015-28569097)
chr5 (19-139)||(8453474-8453592)
chr5 (63-233)||(12866545-12866729)
chr5 (151-230)||(38972935-38973014)
chr5 (163-233)||(33727995-33728065)
chr5 (30-137)||(6092620-6092728)
chr5 (73-132)||(33420437-33420496)
chr5 (186-233)||(39422394-39422441)
chr5 (180-233)||(10127116-10127169)
chr5 (151-227)||(6810171-6810247)
chr5 (151-223)||(27900405-27900477)
chr5 (151-222)||(10822531-10822602)
chr5 (151-226)||(12712558-12712633)
chr5 (151-226)||(12773822-12773897)
chr5 (24-137)||(6369569-6369683)
chr5 (151-233)||(23044985-23045067)
chr5 (24-137)||(27302837-27302948)
chr5 (163-233)||(29245945-29246015)
chr5 (191-233)||(43523801-43523843)
chr5 (181-226)||(3573246-3573291)
chr5 (178-223)||(12457557-12457602)
chr5 (185-233)||(27088365-27088413)
chr5 (164-223)||(2985173-2985232)
chr5 (164-223)||(8453378-8453436)
chr5 (47-122)||(20634055-20634130)
chr5 (47-122)||(20650169-20650244)
chr5 (159-230)||(28045676-28045747)
chr5 (179-233)||(2681257-2681311)
chr5 (163-233)||(13401998-13402068)
chr5 (191-233)||(18116511-18116553)
chr5 (154-216)||(27302746-27302808)
chr5 (52-122)||(34259140-34259210)
chr5 (177-227)||(40187657-40187707)
chr5 (90-151)||(15564576-15564637)
chr5 (153-229)||(29664986-29665060)
chr5 (163-216)||(34259280-34259333)
chr5 (38-87)||(41006502-41006551)
chr5 (193-229)||(35584171-35584207)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-220)||(90463-90679)
[»] scaffold0294 (1 HSPs)
scaffold0294 (19-233)||(14644-14870)
[»] scaffold0027 (1 HSPs)
scaffold0027 (24-155)||(6280-6411)
[»] scaffold0135 (1 HSPs)
scaffold0135 (24-155)||(36030-36159)
[»] scaffold0189 (2 HSPs)
scaffold0189 (24-129)||(4130-4236)
scaffold0189 (170-219)||(4290-4339)
[»] scaffold0097 (1 HSPs)
scaffold0097 (24-155)||(33457-33592)
[»] scaffold0014 (2 HSPs)
scaffold0014 (24-93)||(14290-14359)
scaffold0014 (179-233)||(14177-14230)
[»] scaffold0184 (1 HSPs)
scaffold0184 (151-233)||(2982-3064)
[»] scaffold0157 (1 HSPs)
scaffold0157 (191-231)||(14900-14940)
[»] scaffold0005 (1 HSPs)
scaffold0005 (151-233)||(211377-211459)
[»] scaffold0015 (1 HSPs)
scaffold0015 (47-122)||(56036-56111)
[»] scaffold0009 (1 HSPs)
scaffold0009 (180-223)||(107394-107437)
[»] scaffold1118 (1 HSPs)
scaffold1118 (191-233)||(661-703)
[»] scaffold0244 (1 HSPs)
scaffold0244 (151-229)||(4579-4656)
[»] scaffold0059 (1 HSPs)
scaffold0059 (163-229)||(70120-70186)
[»] scaffold0519 (1 HSPs)
scaffold0519 (163-220)||(10322-10378)
[»] scaffold0795 (1 HSPs)
scaffold0795 (181-217)||(267-303)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 8e-73; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 19 - 257
Target Start/End: Complemental strand, 18826091 - 18825843
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||||||||||||||||||  |||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||    
T  18826091 ctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagtttttataacacgacaattatcaaacaaaataacatggcat 18825992  T
Q  119 atcaacgtaaaataattttctgtattcggg------------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||||||||||||||||||||||| |||            ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  18825991 atcaacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaa 18825892  T
Q  207 tcgaggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    ||| ||||||||||||| || ||||  | ||||||||||||||||||||||    
T  18825891 tcggggaaaacccaaacccacaccc--tcacccaaacccagtcaaaacggg 18825843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 16078892 - 16079113
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16078892 tttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagtttttataacacgacaattatcaaacaaaataacatggcatatcaa 16078991  T
Q  124 cgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    |||||| |||||||||||||||  ||||            |||| | ||| || |||||||||| |||||||||||||||||||||||||||| ||||      
T  16078992 cgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcgga 16079091  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    ||||||||||||| ||||||||    
T  16079092 gaaaacccaaacttatacccaa 16079113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 3920412 - 3920628
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||    
T  3920412 ctcattttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagtttttataacatggcaattatcaaacaaaataacatggcat 3920511  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| ||||||||||||||  |||||||||            ||||||| ||| |||||||||||||  |||| |||||||||||| |||||||||||    
T  3920512 atcaacataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaa 3920611  T
Q  207 tcgaggaaaacccaaac 223  Q
    ||| |||||||||||||    
T  3920612 tcggggaaaacccaaac 3920628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 27850541 - 27850318
Alignment:
Q  23 atttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||| |||||||||||| |||||||    
T  27850541 atttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttataacacgacaattatcaaacaaaataacatgacatatca 27850442  T
Q  123 acgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
     |||||| |||||||||  ||||||||||            |||||| | | |||||||||| || |||||||||||||||||||||||||||||||||     
T  27850441 tcgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcgg 27850342  T
Q  211 ggaaaacccaaactcatacccaat 234  Q
    |||||||||| || || |||||||    
T  27850341 ggaaaacccatacccaaacccaat 27850318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 5376959 - 5377181
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||| ||||||||||||||||| | ||||||||||||  | ||||||||||||||||||||||||||| |||||| |||||  ||    
T  5376959 ctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagtttttataacacgacaattatcaaacaaaattacatgatat 5377058  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||| |||||||||            ||||||| ||| ||||||||||||| | |||||||||||||||| |||||||||||    
T  5377059 atcaacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaa 5377158  T
Q  207 tcgaggaaaacccaaactcatac 229  Q
    ||| |||||||||||||||||||    
T  5377159 tcggggaaaacccaaactcatac 5377181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 12980255 - 12980477
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  12980255 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacgaaaattatcaaacaaaataacatggcatatcaa 12980354  T
Q  124 cgtaaaata-attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    | |||||||  |||| || ||| |||||            ||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||||     
T  12980355 cataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcgg 12980454  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||| |||| |||||||||    
T  12980455 ggaaaaccaaaacccatacccaa 12980477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 26004675 - 26004477
Alignment:
Q  35 ttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataat 134  Q
    ||||||||||||||||||| | | ||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||| |||| ||||    
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatagtttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagtaat 26004576  T
Q  135 tttctgtattcggg----------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||| |||||||          | ||||||| ||| |||| ||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||    
T  26004575 tttctgcattcggggcgagttggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaaac 26004477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 46127399 - 46127266
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||| ||||| |||||||||||| |||    
T  46127399 ctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttattataacacgacaatgatcaaacaaaataacatgacat 46127300  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    ||||   ||||||||||||||| ||| ||||||||||    
T  46127299 atca---taaaataattttctgcatttgggacgggtt 46127266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 24753049 - 24753263
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  24753049 ctcactttcacatttgttagacaaaataatttagttgat-ctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 24753147  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgaggta--ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaa 215  Q
    ||||||| |||||||||||| |  ||| |||||||||| | ||||  ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  24753148 tatcaacataaaataattttttacatttgggacgggtttg-ggtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcg-ggaaa 24753245  T
Q  216 acccaaactcatacccaa 233  Q
    ||||| || |||| ||||    
T  24753246 acccatacccatatccaa 24753263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 26622834 - 26623041
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgta 127  Q
    ||||||||| |||| ||||||||| ||| | ||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||    
T  26622834 acatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacata 26622933  T
Q  128 aaataattttctgtattc------------gggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaa 215  Q
    |||||||||| || ||||            || | ||||||| ||| ||||| ||||||| | |||||| |||||||||||||||||||||||  |||||    
T  26622934 aaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaa 26623033  T
Q  216 acccaaac 223  Q
    ||||||||    
T  26623034 acccaaac 26623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 2630788 - 2630567
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||| |||||||||||||||||||| |  |||||||||||| | |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  2630788 tttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagtttttataatacggcaattatcaaacaaaataacatggcatatcaa 2630689  T
Q  124 cgtaaaata-attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    | |||| ||  |||| || |||||||||            ||||||| ||| |||| |||||||| ||| ||||||||||||||| |||||| ||||||     
T  2630688 cataaagtagtttttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcgg 2630590  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| |||||||||    
T  2630589 ggaaaacccaaacccatacccaa 2630567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 24425255 - 24425455
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||| |||||||| ||||  ||||||||||||| | ||||||||||||||||| ||||||||| || |||||||||||||    
T  24425255 ctcactttaacatttgttagaccggttgatttatttgtc-ctttaaatatcaatggtagtttttataacacgataattatcaaacagaataacatggcat 24425353  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| || | ||||||| || ||| || ||||||            ||  ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  24425354 atcaacatatagtaattttatgcatttggaacgggtttggaaatggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaa 24425453  T
Q  207 tc 208  Q
    ||    
T  24425454 tc 24425455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 23328483 - 23328620
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||| ||||| |||||||||||||||||||| || ||||||||||||| |||| |||||||| ||||||||||||||| |||||||||| | |||    
T  23328483 ctcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataatttttatagcacgacaattatcaaacaaaataacaagacat 23328582  T
Q  119 atcaacgt-aaaataattttctgtattcgggacgggtt 155  Q
     ||||| | |||||||||||||  ||||||||||||||    
T  23328583 gtcaacataaaaataattttctccattcgggacgggtt 23328620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 37579136 - 37579257
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||  |||||||||||||| |  |||||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||    
T  37579136 ctcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttataacatgacaattatcaaacaaaataacatggcat 37579235  T
Q  119 atcaacgtaaaataattttctg 140  Q
    | |||| |||| ||||||||||    
T  37579236 agcaacataaagtaattttctg 37579257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 38140013 - 38139894
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||| ||    
T  38140013 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgaca 38139914  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||  ||||||||||||    
T  38139913 tatcaatataaaataatttt 38139894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 7779881 - 7780108
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  7779881 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 7779980  T
Q  118 tatcaacgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||| ||| |  ||| ||||||            |||||| ||| ||||||||||||| | ||| ||||||||||||||||||||||     
T  7779981 tatcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgag 7780080  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  7780081 atcggggaaaacccatacccatacccaa 7780108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 45885985 - 45885758
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||| ||||| | ||||||||||||| |||||||||||| |||| | |||||||||| |||||||||||  ||    
T  45885985 ctcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataaca 45885886  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||||            ||||| ||| |||||||||||||| |||||||||||||||||||||||||||     
T  45885885 tatcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgag 45885786  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||||| || || |||||||||    
T  45885785 atcggggaaaactcatacccatacccaa 45885758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 37182153 - 37182374
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  37182153 tttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 37182252  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || ||| |||||||| |  ||| |||||            ||||||| | |  |||||||||||| || |||||||||||||||||||||||||| |||     
T  37182253 acataagataattttttacatttgggacgggtatgggtatgggttcg-gatgagtacctatatacccgctacccgtcccatacccgtgttttgaattcgg 37182351  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
     ||||||||| ||||||||||||    
T  37182352 agaaaacccatactcatacccaa 37182374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 45379979 - 45380207
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||| ||    
T  45379979 ctcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 45380078  T
Q  118 tatcaacgtaaaataa-ttttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    | ||||| |||| ||| |||| |  ||| |||||            ||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  45380079 tgtcaacataaagtaatttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttga 45380178  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| | |||||||| || |||| ||||    
T  45380179 aatcgggaaaaacccatacccatatccaa 45380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 18125448 - 18125225
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| ||||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  18125448 ctcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 18125349  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| |||||||            ||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  18125348 tatcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 18125249  T
Q  206 atcgaggaaaacccaaactcatac 229  Q
    |||| | |||||||| ||||||||    
T  18125248 atcgggaaaaacccatactcatac 18125225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 21702532 - 21702759
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | |||||||||| || | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  21702532 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 21702631  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  21702632 tatcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 21702731  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| ||||||||||||    
T  21702732 atcggggaaaacccatactcatacccaa 21702759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 17885343 - 17885552
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttata-acacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||| ||||  || ||||||||||| | ||||||||||||| | ||||||||||  ||| |||||||||||| |||||||||||| |||||||    
T  17885343 tttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatcaaacaaaataacatgacatatca 17885442  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||||            ||||||| ||| || |||||||||| ||||||||||||||||||| |||||| ||||||     
T  17885443 acataaagtaattttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcgg 17885542  T
Q  211 ggaaaaccca 220  Q
    ||||||||||    
T  17885543 ggaaaaccca 17885552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 25783126 - 25782909
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||| ||| ||||||||||||||||| | ||||||||||  | |||||||||||||||||  |||||||||| |||||||| |||  ||    
T  25783126 ctcactttaatatttattataccgattgatttagttgctcctttaaatattgatgatagtttttataacactgcaattatcaaacaaaataatatgagat 25783027  T
Q  119 atcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    || ||| |||| |||||||||| |||||||||||            ||||| ||| ||||||||||||| | ||| ||||| ||||||||||||||  ||    
T  25783026 attaacataaagtaattttctgcattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataa 25782927  T
Q  207 tcgaggaaaacccaaact 224  Q
    |||  |||||||||||||    
T  25782926 tcggagaaaacccaaact 25782909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 30650503 - 30650728
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| | |||||||||| |||||||||||  |    
T  30650503 actcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataac 30650602  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||||||| |||| ||||||| |  ||| |||||            ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30650603 atatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 30650702  T
Q  205 aatcgaggaaaacccaaactcatacc 230  Q
     || | ||||||| || || ||||||    
T  30650703 gattggggaaaactcatacccatacc 30650728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 16866042 - 16866269
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  |||||||||||| |||||||||||| |||| | |||||||||| |||||||||||  ||    
T  16866042 ctcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataaca 16866141  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| ||||||||||            || ||| ||||||||||||| |||||| |||||||||||||||||||||     
T  16866142 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgag 16866241  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||| ||||    
T  16866242 atcggggaaaacccatacccataaccaa 16866269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 44734572 - 44734366
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||| |||||||||||  | ||||||| ||| | ||| ||||||||| |||||||||||| |||| ||||||||||||  ||||||||||| |||||||    
T  44734572 tttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtttttattaacatgacaattatcaaataaaataacatgacatatca 44734473  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||||            ||||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  44734472 acataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcga 44734373  T
Q  211 ggaaaac 217  Q
    | |||||    
T  44734372 gaaaaac 44734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 41741669 - 41741443
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | | ||||||||||| | |||||||||| |||| || ||||||||| |||||||||||| ||    
T  41741669 ctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacatgaca 41741570  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcga-----------ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||   |||| ||||||| |  ||| |||||||||  ||           ||| |||||||| |||| ||||| ||||| ||||||||||||||||||    
T  41741569 tatcagtataaagtaattttttacatttgggacgggtatgaatatgggttcgggtgggtacctacatacccgttatccgtctcatacccgtgttttgaaa 41741470  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    ||| |||||||||| ||||||||||||    
T  41741469 tcggggaaaacccatactcatacccaa 41741443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 10072484 - 10072566
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||    
T  10072484 gggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaa 10072566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 39316868 - 39317095
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| | | | ||| ||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  39316868 ctcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 39316967  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| | |||||            ||||  | | | ||| ||||||| || ||||||||||||||||||||||||||    
T  39316968 tatcaacataaaataattttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaa 39317067  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||| || ||||||| ||||    
T  39317068 atcgaggaaaactcatactcatatccaa 39317095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 39456233 - 39456008
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataac-acgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | |||  |||||||| | || ||||||| || | | |||||||||| |||||||||||| ||    
T  39456233 ctcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattaccatggcaattatcaaacaaaataacatgaca 39456134  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt-----------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    ||||||| |||| ||||||| |  ||| |||||||||           ||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  39456133 tatcaacataaagtaatttt-tacatttgggacgggtatgagtatggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaa 39456035  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    ||| |||||||||| |  |||||||||    
T  39456034 tcggggaaaacccatatccatacccaa 39456008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 25905510 - 25905728
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  25905510 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 25905609  T
Q  127 aaaataattttctgtattcgggac-------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgagga 213  Q
    ||||||||||| |  ||| |||||             | ||||| ||| ||||||||| ||| |||||||||||||||||| ||||||||| || | |||    
T  25905610 aaaataattttttacatttgggacgatgtttgggtatgagttcggggt-ggtacctatgtacccgttacccgtcccatacctgtgttttgagattgggga 25905708  T
Q  214 aaacccaaactcatacccaa 233  Q
    ||||||| || |||||||||    
T  25905709 aaacccatacccatacccaa 25905728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 35074342 - 35074570
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  35074342 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 35074441  T
Q  118 tatcaacgtaaaataattttctgt-attcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| |||| || |||| |   ||| ||||||||||            || | | ||||||||||||| |||||||||||||||||||||||||| |    
T  35074442 tatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaa 35074541  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     |||| |||||||||| || |||||||||    
T  35074542 gatcggggaaaacccatacccatacccaa 35074570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 44986113 - 44985984
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  |||||||    
T  44986113 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacat-acatatca 44986015  T
Q  123 acgtaaaataattttctgtattcgggacgggt 154  Q
    || | |||||||||| |  ||| |||||||||    
T  44986014 acat-aaataattttttacatttgggacgggt 44985984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 41103531 - 41103743
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatca---aagatagtttttat-aacacgacaattatcaagcaaaataacatggcata 119  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||   | | || ||| ||| |||| |||||||||||| |||||||||| |  |||    
T  41103531 tttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaaaataacaagagata 41103630  T
Q  120 tcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaat 207  Q
    ||||| |||||||||||| |  |||  |||||||||            || ||| ||||| ||||||| ||||| |||||||||||||||||||||||||    
T  41103631 tcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaat 41103730  T
Q  208 cgaggaaaaccca 220  Q
    || ||||||||||    
T  41103731 cggggaaaaccca 41103743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 3227100 - 3226943
Alignment:
Q  84 taacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctat 171  Q
    ||||| |||||||||||| |||||||||||| ||||||||| |||||||||||| |  ||| |||| |            |||||| ||| |||||||||    
T  3227100 taacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtgggtacctat 3227001  T
Q  172 atactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    || |  |||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  3227000 attcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatac 3226943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 44794247 - 44794051
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  ||||| |||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  44794247 ctcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaattatcaaacaaaataacataaca 44794148  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttg 203  Q
    ||||||| |||||||||||| |  ||| |||||            ||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||    
T  44794147 tatcaacataaaataattttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgttttg 44794051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 37196218 - 37196099
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| |  |||| ||||||| | ||||||||| ||||| |||| ||||||| |||||||||||  ||    
T  37196218 ctcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgacagttatcaaacaaaataacataaca 37196119  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  37196118 tatcaacataaagtaatttt 37196099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 5916288 - 5916194
Alignment:
Q  16 atactcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataa 110  Q
    ||||||| |||||||||||||||||||||||||| | ||  | ||||||||||||| | ||||||| |||||||  |||||||||| ||||||||    
T  5916288 atactcagtttaacatttgttagaccgattgattgatttactcctttaaatatcaatggtagttttgataacacagcaattatcaaacaaaataa 5916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 25980132 - 25980018
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||| ||  | ||||||||||||| |  ||||||||| |||| || ||||||||| |||||||||||| ||| |||    
T  25980132 tttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaaaataacatgacatttca 25980033  T
Q  123 acgtaaaataatttt 137  Q
    || ||||||||||||    
T  25980032 acataaaataatttt 25980018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 17851753 - 17851838
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgtaaa 129  Q
    ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||||||||| ||||    
T  17851753 tgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaa 17851838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 44658639 - 44658550
Alignment:
Q  49 ttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataatttt 137  Q
    ||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  44658639 ttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaatattttt 44658550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 10995882 - 10995830
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  10995882 gttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactcatacc 10995830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 38152835 - 38152987
Alignment:
Q  93 aattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgtt 180  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||| |  ||| ||||||||||            || ||| ||||||||||||  ||||    
T  38152835 aattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgtt 38152934  T
Q  181 acccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    | |||| |||||||| ||||||||||||| |||||||||| || |||||||||    
T  38152935 atccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaa 38152987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 22973406 - 22973488
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| |||||  |||| | | ||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||||    
T  22973406 gggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaa 22973488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 42908088 - 42908034
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  42908088 ttacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaa 42908034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 43507479 - 43507545
Alignment:
Q  167 cctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  43507479 cctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaa 43507545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 26004740 - 26004675
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat 84  Q
    |||| |||||||||||||||||||||||||||||| | | ||||||||||||| | ||||||||||    
T  26004740 ctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttat 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 30839207 - 30839127
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||| ||| ||||| | |||||| |||||||||||||| ||||||||||  ||||||| |||||||||||||||    
T  30839207 gttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaa 30839127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 33841123 - 33841174
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  33841123 gttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatac 33841174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 43507306 - 43507401
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacat 113  Q
    |||| ||||| ||||||||||| || ||||||||||| |  |||||||||||| | ||||||||| ||| | |||||||||||| |||||||||||    
T  43507306 ctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatgacaattatcaaacaaaataacat 43507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 45708938 - 45708871
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    ||||| ||| ||||||||||||| |||||||||||| ||||||||||||||| ||||  |||||||||    
T  45708938 gttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcggagaaaaccca 45708871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 3157113 - 3157183
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | ||||| ||||||||||||| | ||||||||||| |||||||| |||| |||||||||    
T  3157113 ggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaa 3157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 18683992 - 18684074
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | ||| ||||| |  |||||||||||| ||||||| ||||||||||| ||||||||| ||| |||||||||    
T  18683992 gggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaa 18684074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 38139855 - 38139785
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||| | |||||||||| || |||| ||||    
T  38139855 ggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaa 38139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 27063169 - 27063238
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||| | ||||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||||    
T  27063169 gtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaa 27063238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 42005952 - 42005997
Alignment:
Q  181 acccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  42005952 acccgtcccatacacgtgttttgaaattgaggaaaacccaaactca 42005997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 27896524 - 27896468
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||| |||||||||    
T  27896524 cgttacccgtcccatacccatgttttgaaataagggaaaacccaaacccatacccaa 27896468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 45709082 - 45708971
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | || |||||| ||| | |||||||||||| |||||||| ||  ||    
T  45709082 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtaatttttattaatatgacaattatcaaacaaaataatataaca 45708983  T
Q  118 tatcaacgtaaa 129  Q
    ||||||| ||||    
T  45708982 tatcaacataaa 45708971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 3227755 - 3227698
Alignment:
Q  27 aacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat 84  Q
    |||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||||    
T  3227755 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttat 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 25979980 - 25979923
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    ||||| ||||||  ||||||||||| |||||| |||||||||||||| ||||||||||    
T  25979980 ggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaaaccca 25979923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 23475338 - 23475266
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||||| || ||||| ||||| | | |||||| ||||| |||||||||||||||||| | |||||||||||    
T  23475338 gggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaac 23475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 16811759 - 16811822
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    |||| |||||||| | ||| ||||| |||||||||||||||| |||| |||||| |||||||||    
T  16811759 ggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaatccaaactca 16811822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 17851884 - 17851952
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||  ||||||||||||||||||||||  || | |||| |||||||||| || |||||||||    
T  17851884 ggtacctatatatccgttacccgtcccatacccgtg--ttaagatcggggaaaacccatacccatacccaa 17851952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 37103329 - 37103266
Alignment:
Q  59 ctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||| |||||| || |||| ||||| || |||||||||||| | ||||||||||||||||||    
T  37103329 ctttaattatcaatgaaagttattatatcatgacaattatcaaaccaaataacatggcatatca 37103266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 44845210 - 44845131
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||||||| ||| ||||  ||||| ||| ||| ||||||| ||||||| || |||||||| ||||||||||||| ||||||    
T  44845210 gggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaacccatacc 44845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 16811644 - 16811722
Alignment:
Q  60 tttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataatttt 137  Q
    |||||||||||| | |||||||||| |||| | |||||||||| |||||||||||   |||||||| |||| |||||||    
T  16811644 tttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaatttt 16811722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 28309512 - 28309582
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||| ||||| ||| ||||| | ||||||||||||| ||||||| ||||||||||  ||| |||||||||    
T  28309512 gttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcagggagaacccaaac 28309582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 31426052 - 31426098
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||||| ||||||||| |||| |||||| |||||||||||||    
T  31426052 cgttacccgtctcatacccgtatttttaaatcggggaaaacccaaac 31426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 32546210 - 32546288
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||| ||| ||||| ||||| | |||||||||| || ||||||| ||||||||||| | |||| |||||| |||||    
T  32546210 gggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaatccaaacccatac 32546288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 40335707 - 40335633
Alignment:
Q  159 ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||| ||||| ||||||||||||| |||| || | |||||||||| | ||||||| ||||||||| ||||    
T  40335707 ggtagttacatatatcctcgttacccgtcacatatccatattttgaaatcaaagaaaacctaaactcatatccaa 40335633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 27063354 - 27063434
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||| ||||| ||||| | ||||||||||||| ||||||| || | |||||| |||||||| | || |||||||||    
T  27063354 gttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccgagacccatacccaa 27063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 37218049 - 37218105
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| |||| |||||||||||| |   ||||| |||||||||||||||    
T  37218049 cgttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaa 37218105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 38152775 - 38152827
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaa 71  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||| |||||||    
T  38152775 ctcactttaacatttgttagacggaatgatttagttgatcctttagatatcaa 38152827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 46127246 - 46127179
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    |||||||||| ||  |||| |||||||||||||||| ||| |||||| ||||| ||||||| |||||||    
T  46127246 ggtacctatacacctgttatccgtcccatacccgtgattttaaatcg-ggaaaccccaaacccataccc 46127179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 35937036 - 35936822
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||| ||||||||||||| | ||||||||||||| | |||||||| |||||||  ||||||||| |||||||||||| |||    
T  35937036 ctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttgtaacacggaaattatcaaacaaaataacatgacat 35936937  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacc 218  Q
    |||||| |||| |||||||||  ||||  |||||||| | ||| ||||||||||||| ||||| ||||||||||| |||| |||||||||| ||||||||    
T  35936936 atcaacataaagtaattttctacattcatgacgggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacc 35936837  T
Q  219 caaactcatacccaa 233  Q
    |||||||||||||||    
T  35936836 caaactcatacccaa 35936822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 50426875 - 50426633
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||| |||| || ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||| ||    
T  50426875 ctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgaca 50426776  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    ||||||| |||| ||| ||| |  ||| |||||      ||||||| ||| ||||||||||||| ||||| ||||| ||||||||||||||||||||  |    
T  50426775 tatcaacataaagtaaatttttacatttgggacgggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagg 50426676  T
Q  212 gaaaacccaaactcatacccaataacccaaacccagtcaaaacgg 256  Q
    |||| |||| || || |||||  ||||||||||||||||||||||    
T  50426675 gaaagcccatacccaaaccca--aacccaaacccagtcaaaacgg 50426633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 29871504 - 29871278
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| ||||||||||||||||||| |||||| | ||||||||||||| | |||||||||||||| |  ||||||||| |||||||||||| |||    
T  29871504 ctcattttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagtttttataacatgggaattatcaaacaaaataacatgacat 29871405  T
Q  119 atcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| ||||||||||||||  |||||||||||            ||||  ||| |||||||||||||  |||||| ||||||||||| ||||||||||    
T  29871404 atcaacataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaa 29871305  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    |||  ||||||||||||||||||||||    
T  29871304 tcggagaaaacccaaactcatacccaa 29871278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 34673501 - 34673275
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||    
T  34673501 ctcattttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcat 34673402  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| || ||||||   ||||| ||            ||||||| ||| ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  34673401 atcaacataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaa 34673302  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    | | | ||||||||||| |||||||||    
T  34673301 ttgggaaaaacccaaacccatacccaa 34673275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 44615690 - 44615468
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44615690 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaaataacatggcatatcaa 44615591  T
Q  124 cgtaaaata-attttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
      |||| ||  |||| || ||| |||||||            ||| | ||| |||||||||||||  ||||||||||||||||||||||||| |||||      
T  44615590 gataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcag 44615491  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||||||||||||||||    
T  44615490 ggaaaacccaaactcatacccaa 44615468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 44792879 - 44793101
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44792879 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaaataacatggcatatcaa 44792978  T
Q  124 cgtaaaata-attttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
      |||| ||  |||| || ||| |||||||            ||| | ||| |||||||||||||  ||||||||||||||||||||||||| |||||      
T  44792979 gataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcag 44793078  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||||||||||||||||    
T  44793079 ggaaaacccaaactcatacccaa 44793101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 24710727 - 24710943
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||        
T  24710727 ctcattttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatg 24710826  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgagg-taggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaa 216  Q
    ||||||| |||| ||||||| |  ||| |||||||||| |||  | ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  24710827 tatcaacataaagtaattttttacatttgggacgggtttgagtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaa 24710926  T
Q  217 cccaaactcatacccaa 233  Q
    |||| ||||||| ||||    
T  24710927 cccatactcatatccaa 24710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 42708050 - 42707830
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||| |||||||| || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  42708050 ctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 42707951  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    ||||||| |||||||||||| |  ||| |||||      ||||||| |||  |||| ||||| | |||||||||||||||||||||||||||||||||      
T  42707950 tatcaacataaaataattttttacatttgggacgggtatgggttcg-ggtgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcgga 42707852  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    |||||| || ||||||||||||    
T  42707851 gaaaactcatactcatacccaa 42707830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 9983109 - 9982883
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||| ||||||||| | |||| |||||||| | ||||||| |||||| || ||||||||| ||||||||||||  ||    
T  9983109 ctcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagttttgataacatgagaattatcaaacaaaataacatgatat 9983010  T
Q  119 atcaacgtaaaataattttctgtattcggg------------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    || ||| |||| |||||||||| |||||||            | ||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  9983009 attaacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaa 9982910  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    | | ||||||  |||||||||||||||    
T  9982909 ttggggaaaattcaaactcatacccaa 9982883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 5180914 - 5181132
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||| |||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  5180914 ctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 5181013  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    ||||||| |||||||||||| |  ||| || ||      ||||| | ||| ||| ||||||||| ||||||||||||||||||||| ||||||||||| |    
T  5181014 tatcaacataaaataattttttacatttggaacgggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggg 5181113  T
Q  212 gaaaacccaaactcatacc 230  Q
    ||||||||| || ||||||    
T  5181114 gaaaacccatacccatacc 5181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 44632350 - 44632246
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  44632350 tttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagtttttataacacgacaattgtcaaacaaaataatatggcatatcaa 44632251  T
Q  124 cgtaa 128  Q
    |||||    
T  44632250 cgtaa 44632246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 230
Target Start/End: Complemental strand, 24236972 - 24236757
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  24236972 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 24236873  T
Q  127 aaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||||||||||| |  ||| |||||            ||||||| ||| ||||||||||||| |||| ||||| ||||||||||||||||| |||| ||||    
T  24236872 aaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaa 24236773  T
Q  215 aacccaaactcatacc 230  Q
    |||||| || ||||||    
T  24236772 aacccatacccatacc 24236757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 39616172 - 39616388
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||| |||||||| || |||||||  || |  |||||||||||| | || ||||||| |||| || ||||| ||| |||||||||||| ||    
T  39616172 ctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatgataattagcaaacaaaataacatgaca 39616271  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgaggta--ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaa 215  Q
    ||||||| |||||||||||| |  ||| |||||||||  | ||||  ||| |||||||||| ||||||||||| |||||||||||||||||| | |||||    
T  39616272 tatcaacataaaataattttttacatttgggacgggtatg-ggtatgggtgcctatatacttgttacccgtcctatacccgtgttttgaaataggggaaa 39616370  T
Q  216 acccaaactcatacccaa 233  Q
    ||||| ||||||||||||    
T  39616371 acccatactcatacccaa 39616388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 12494885 - 12495103
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||||  | |||||||||||||||| ||||||| || |||||||||||| ||| ||||    
T  12494885 tttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagtttttataacacgccaattataaaacaaaataacatgtcatgtcaa 12494984  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | || | || ||||||  ||| |||||            ||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||| |    
T  12494985 catatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcggg 12495084  T
Q  212 gaaaacccaaactcatacc 230  Q
     |||||| |||| ||||||    
T  12495085 aaaaaccaaaacccatacc 12495103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 16433380 - 16433170
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||||||||| ||||||||||||| | ||||||||||||| | ||||||||||||    ||||||||||| |||||||||||| |||    
T  16433380 ctcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttataa---tacaattatcaaacaaaataacatgacat 16433284  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggttcgaggta----------ggtacctatatactcgttacccgtcccatacccgtgttttgaaatc 208  Q
    |||||| |||| |||||||||| ||| |||  ||||| | ||||          ||||||||||||  ||||||||||||||||||||||||||||||||    
T  16433283 atcaacataaagtaattttctgcatttggggtgggtttg-ggtatgggttcgggggtacctatatatccgttacccgtcccatacccgtgttttgaaatc 16433185  T
Q  209 gaggaaaacccaaac 223  Q
    |  |||||| |||||    
T  16433184 ggagaaaactcaaac 16433170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 17134821 - 17135043
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  17134821 tttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 17134920  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||  |||||            ||||||| ||  ||||||||||||| ||||||||||| |||||||||||||||||||||     
T  17134921 acataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcgg 17135020  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||| || || ||||||    
T  17135021 ggaaaacccatacccacacccaa 17135043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 45866400 - 45866178
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| || ||||||||| |||||||||||| |||||||    
T  45866400 tttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacatgacatatca 45866301  T
Q  123 acgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||| ||            ||| | ||| ||||||||||||||| ||||| ||| |||||||||||||||||||||     
T  45866300 acataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcgg 45866201  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||| || |||||||||    
T  45866200 ggaaaacccatacccatacccaa 45866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 18354295 - 18354086
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||| ||||| || ||||||||||| |  |||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  18354295 tttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 18354196  T
Q  123 acgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||||||||||| |  ||| ||||||            |||||| ||| || || ||||||| ||||||||||||||||||| |||||||||||||     
T  18354195 acataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcgg 18354096  T
Q  211 ggaaaaccca 220  Q
    ||||||||||    
T  18354095 ggaaaaccca 18354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 36187440 - 36187213
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  |||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  36187440 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 36187341  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||| ||| |  ||| |||||||||| | |            || ||||||||||||| ||||||||||||||||||||||||||||     
T  36187340 tatcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 36187241  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  36187240 atcggggaaaacccatacccatacccaa 36187213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 49741221 - 49741090
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||| ||||||| ||||||||| | |||||||||||||   |||||||||||||||  |||||||||| |||||||||||  ||||| ||    
T  49741221 tttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataacataacatattaa 49741122  T
Q  124 cgtaaaataattttctgtattcgggacgggtt 155  Q
    | |||| || ||||||| ||||||||||||||    
T  49741121 cataaagtagttttctgcattcgggacgggtt 49741090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 19572731 - 19572505
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | ||| || |||||| | |||||||||| |||| | |||||||||| |||||||||||| ||    
T  19572731 ctcactttaacatttgttagacgtaatgatttaattgatccttcaa-tatcaatggtagtttttattaacatggcaattatcaaacaaaataacatgaca 19572633  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||||||            ||| ||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  19572632 tatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaa 19572533  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| | |||||||| || |||||||||    
T  19572532 atcgggaaaaacccatacccatacccaa 19572505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 40087683 - 40087547
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| ||||||||||||  |    
T  40087683 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgata 40087584  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt 154  Q
    ||||||| |||| ||||||| |  ||| |||||||||    
T  40087583 tatcaacataaagtaattttttacatttgggacgggt 40087547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 17092174 - 17092043
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||| |||||  || ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  17092174 tttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacatatca 17092075  T
Q  123 acgtaaaataattttctgtattcgggacgggt 154  Q
    || |||| ||||||| |  ||| |||||||||    
T  17092074 acataaagtaattttttacatttgggacgggt 17092043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 29936285 - 29936534
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| ||||||||| ||  ||||||||||  ||    
T  29936285 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacattaca 29936384  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||| ||||||     
T  29936385 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgag 29936484  T
Q  206 atcgaggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    |||| |||||||||| || ||||| ||   ||||||||  ||||||||||||    
T  29936485 atcggggaaaacccatacccatactca--tacccaaacttagtcaaaacggg 29936534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 34060239 - 34060034
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | | ||||||| ||||| |||||||||||| |||||||||||  ||    
T  34060239 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatgacaattatcaaacaaaataacat-aca 34060141  T
Q  118 tatcaacgtaaaataa-ttttctgtattcgggac------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    ||||||| |||| ||| |||| |  | | |||||      |||||||  || |||||||||||||  |||| ||||| ||||||||||||||||||||||    
T  34060140 tatcaacataaagtaatttttttacaattgggacgggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaatcga 34060041  T
Q  211 ggaaaac 217  Q
    |||||||    
T  34060040 ggaaaac 34060034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 42439890 - 42439771
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||    
T  42439890 ctcactttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 42439791  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  42439790 tatcaacataaagtaatttt 42439771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 3628207 - 3627993
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||| | | |||||||| || | |||||||||| |||| || ||||||||| |||||||||||| ||    
T  3628207 ctcactttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaaaataacatgaca 3628108  T
Q  118 tatcaacgtaaaataattttctgta--ttcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttg 203  Q
    ||||||| |||| ||||||| | ||  || |||||            ||||||| ||| |||||||| |||| |||||||||||||||||||||||||||    
T  3628107 tatcaacataaagtaattttttttacatttgggactggaatgagtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttg 3628008  T
Q  204 aaatcgaggaaaacc 218  Q
    |||||| ||||||||    
T  3628007 aaatcggggaaaacc 3627993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 16408823 - 16409038
Alignment:
Q  27 aacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacg 125  Q
    |||||||||||||| || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||||    |     
T  16408823 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacata----ca 16408918  T
Q  126 taaaataattttctgtatt-----cggg-------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgagga 213  Q
    |||| ||||||| |  |||     ||||       | ||||||| ||| |||||||||||||  |||||||||||||||||||||||||||||| | |||    
T  16408919 taaagtaattttttacatttggagcgggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattgggga 16409018  T
Q  214 aaacccaaactcatacccaa 233  Q
    ||||||| || |||||||||    
T  16409019 aaacccatacccatacccaa 16409038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 28297802 - 28298029
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  28297802 ctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 28297901  T
Q  118 tatcaacgtaaaata-attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| |||||||  |||| |  ||| |||||            ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  28297902 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 28298001  T
Q  205 aatcgaggaaaacccaaactcataccca 232  Q
     |||| ||||||| || || ||||||||    
T  28298002 gatcggggaaaactcatacccataccca 28298029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 49250993 - 49250766
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| |  |||||||||||| |||||||||||| |||| |||||||||||| ||||||| |||  ||    
T  49250993 ctcactttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaaaatagcataaca 49250894  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||||            |||||| | ||||||||||| | ||||||||||||||||||||||||||     
T  49250893 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgag 49250794  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||||| || || |||||||||    
T  49250793 atcggggaaaactcatacccatacccaa 49250766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 23966741 - 23966860
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||  || ||||||||||| | |||||||||||||   |||||||||| |||| |||||||||||| |||||||||||  ||    
T  23966741 ctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagtagtttttataaacatgacaattatcaaacaaaataacataaca 23966840  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  23966841 tatcaacataaagtaatttt 23966860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 23490846 - 23490764
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||| || |||||||||    
T  23490846 gggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaa 23490764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 51421727 - 51421954
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||| ||| | |||||||||| |||| | |||||||||| |||||||||||  ||    
T  51421727 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaataacataaca 51421826  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| || | ||||||| |  ||| ||||||||||            || ||| ||||| |||||||  |||||||||||||||||||||||||||     
T  51421827 tatcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgag 51421926  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| | |||||||| || |||||||||    
T  51421927 atcgggaaaaacccatacccatacccaa 51421954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 33293578 - 33293524
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  33293578 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaa 33293524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 2514677 - 2514769
Alignment:
Q  59 ctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat-atcaacgtaaaataattttctgtattcgggac 150  Q
    ||||||||||||| | |||||||||| ||||| |||||||||| |||||||||||| |||  ||||| |||||||||||| || |||||||||    
T  2514677 ctttaaatatcaatggtagtttttattacacggcaattatcaaacaaaataacatgacatgttcaacataaaataattttatgcattcgggac 2514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 13798270 - 13798334
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||    
T  13798270 tatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaa 13798334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 13020562 - 13020648
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaata 109  Q
    ||||| ||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||    
T  13020562 tttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 16237379 - 16237297
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| |||  |||| ||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||    
T  16237379 gggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaattcatatccaa 16237297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 10778616 - 10778560
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  10778616 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaa 10778560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 20774501 - 20774612
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | |||||||||||||  | ||||||||| |||| |||||||||||| |||||||||||  ||    
T  20774501 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgacaattatcaaacaaaataacataaca 20774600  T
Q  118 tatcaacgtaaa 129  Q
    ||||||| ||||    
T  20774601 tatcaacataaa 20774612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 38733894 - 38733965
Alignment:
Q  52 gttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||| ||||||||||||||| || | ||||||||||| |||||||||||| | ||||||||| |||||||||    
T  38733894 gttgcttctttaaatatcaatgacaatttttataacatgacaattatcaaaccaaataacatagcatatcaa 38733965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 23968621 - 23968675
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaa 23968675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 34611087 - 34611169
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| |||  |||||||||||| ||||||  |||||||||||||||||||| |||| | |||||||| || |||||||||    
T  34611087 gggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaa 34611169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 34085249 - 34085326
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcata 228  Q
    ||||||| ||| ||||| ||||  | |||||||| |||||||| ||||||||||||||| | ||||||||||||||||    
T  34085249 gggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcata 34085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 34610942 - 34611053
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| |  |||||||||||| | ||||||||| ||||| |||||||||||| |||||||| ||  ||    
T  34610942 ctcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataaca 34611041  T
Q  118 tatcaacgtaaa 129  Q
    ||||||| ||||    
T  34611042 tatcaacataaa 34611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 48125758 - 48125683
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    ||||||| ||| | ||||||||| ||||||||||||||| |||||||||||| |||||  | |||| |||||||||    
T  48125758 gggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatccaaactca 48125683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 42439745 - 42439687
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcg 209  Q
    ||||||| ||| ||||||||||||| |||||| |||||||||||| |||||||| ||||    
T  42439745 gggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttgagatcg 42439687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 2514811 - 2514851
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccc 2514851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 13390354 - 13390418
Alignment:
Q  90 gacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcgggacgggt 154  Q
    |||||||||||| |||||||||||| ||||||||| |||| ||||||| |  ||| |||||||||    
T  13390354 gacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggt 13390418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 19003715 - 19003659
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||||||||||||| ||||| ||||| ||||||||| ||| |||||||||    
T  19003715 cgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaa 19003659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 44632189 - 44632149
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacc 218  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  44632189 gttacccgtcccatacccgtgttttgaaatcggagaaaacc 44632149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 17092018 - 17091952
Alignment:
Q  167 cctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||| |||||| ||||||||||| ||||| | |||||| ||||||| || ||||||| ||||    
T  17092018 cctatatacccgttacgcgtcccatacctgtgttataaaatcggggaaaactcatactcatatccaa 17091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 35069964 - 35069882
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| |  ||||||||||   ||||||| || |||||||| ||||||| |||||||||||||||    
T  35069964 gggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcatacccaa 35069882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 36617386 - 36617452
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgtttt-gaaatcgaggaaaacccaaactcata 228  Q
    ||||||||||| |||||||  |||||| ||||| |||||| ||||||| ||||||| ||||||||||    
T  36617386 ggtacctatattctcgttattcgtcccgtacccatgtttttgaaatcgtggaaaactcaaactcata 36617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 36616796 - 36616861
Alignment:
Q  59 ctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaac 124  Q
    ||||||||||||| || | ||||||||||  |||||||||||| | |||||||||| |||| ||||    
T  36616796 ctttaaatatcaacgacaatttttataacttgacaattatcaaaccaaataacatgacataacaac 36616861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 12718821 - 12718765
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | ||| ||| || |||||||| |||||| ||||||||||||||||    
T  12718821 cgttacccgtctcgtacacgtattatgaaatcggggaaaatccaaactcatacccaa 12718765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 33267 - 33510
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||   ||||||||||||||| ||||||| ||| |||||||||||||||| ||||    
T  33267 tttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagtttttataacacaacaattaccaaacaaaataacatggcatgtcaa 33366  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| || ||||||| |||||||||            ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||| |    
T  33367 cataaagtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggg 33466  T
Q  212 gaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    |||||||||||| ||||||||  |||||||||||  ||||||||||    
T  33467 gaaaacccaaacccataccca--aacccaaacccgatcaaaacggg 33510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 4557519 - 4557298
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||   |||||||||||||||  |||||||||| |||||||||||| ||||||||    
T  4557519 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataacatgacatatcaa 4557420  T
Q  124 cgtaaaataattttctgtattcggg------------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| |||||||||| |||||||            | ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| || |    
T  4557419 cataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggg 4557320  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    |||||||||||| |||||||||    
T  4557319 gaaaacccaaacccatacccaa 4557298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 42758243 - 42758469
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||| |||||||| ||| | ||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||    
T  42758243 ctcattttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttataacatggcaattatcaaacaaaataacatggcat 42758342  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||   ||||||||            ||||||| |||   |||||||||||  ||||||||||||||||| |||||||||||    
T  42758343 atcaacataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaa 42758442  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    ||| || ||||||||||||||||||||    
T  42758443 tcgggggaaacccaaactcatacccaa 42758469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 53631773 - 53631996
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||| |||||||||||||||| |||||||||| | ||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||    
T  53631773 ctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcat 53631872  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||  |||||||||            ||||||| ||| ||||||||||||| ||||||||||| ||||| |||||||| |||    
T  53631873 atcaacataaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaa 53631972  T
Q  207 tcgaggaaaacccaaactcatacc 230  Q
    |   ||||||| ||||| ||||||    
T  53631973 tttgggaaaactcaaacccatacc 53631996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 4016258 - 4016037
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| |   |||||||||||||||  |||||||||| |||||||||||| ||||||||    
T  4016258 tttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagtttttataacacatcaattatcaaacaaaataacatgacatatcaa 4016159  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||  || ||||||| |||||||||            |||||||  || ||||||||||||| ||||| ||||||||||||| ||||||||||||| |    
T  4016158 cataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggg 4016059  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    |||||||||||| |||||||||    
T  4016058 gaaaacccaaacccatacccaa 4016037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 34119527 - 34119751
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||| |  ||| |||||||| | ||||||||||||||||||||||||||| |||||||  |||||||    
T  34119527 ctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagtttttataacacgacaattatcaaacaaaata--atggcat 34119624  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    ||||||  ||| || ||||||| ||| |||||            ||||||| ||| |||||||||||||  |||| ||||| |||||||||||||| |||    
T  34119625 atcaacacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaa 34119724  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    ||| | ||||| |||||||||||||||    
T  34119725 tcgggaaaaactcaaactcatacccaa 34119751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 41937221 - 41937005
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||||||||||||||||||  ||| |||||||| | |||| |||||||||||||||||||||| |||||||| ||| |||    
T  41937221 ctcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtctttataacacgacaattatcaaacaaaataatatgacat 41937122  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggttcgaggta--ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaa 216  Q
     |||||  ||| || ||||||| ||| | |||| ||| | ||||   ||| |||||||| ||||| ||||| ||||| |||||||| |||||| ||||||    
T  41937121 gtcaacacaaagtagttttctgcatttgagacgagtttg-ggtatgagtatctatatacccgttatccgtctcatactcgtgttttaaaatcggggaaaa 41937023  T
Q  217 cccaaactcatacccaat 234  Q
    |||| ||||| |||||||    
T  41937022 cccatactcaaacccaat 41937005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 54317018 - 54317235
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||   |||||||||||| | |||||||||||||   |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  54317018 tttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 54317117  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| |||||||||   || |||||            ||||||| ||| ||||||||||||| |||||||||||| ||||  |||||||||||||| |    
T  54317118 cataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggg 54317217  T
Q  212 gaaaacccaaactcatac 229  Q
    |||||| ||||| |||||    
T  54317218 gaaaactcaaacacatac 54317235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 49579932 - 49580159
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||| ||||| |||||||||||  ||    
T  49579932 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatcatcaaacaaaataacataaca 49580031  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||  |||| ||||||| |  ||| |||||||||            ||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  49580032 tatcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgag 49580131  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  49580132 atcggggaaaacccatacccatacccaa 49580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 233
Target Start/End: Complemental strand, 48391028 - 48390810
Alignment:
Q  27 aacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||| || ||||||||||| |  |||||||||||| | |||||||| ||||| |||||||||||| |||||||||||| ||||||||| |    
T  48391028 aacatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataacatgacatatcaacat 48390929  T
Q  127 aaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||| ||||||| |   ||||||||            ||||||  | | ||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  48390928 aaagtaattttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaa 48390829  T
Q  215 aacccaaactcatacccaa 233  Q
    |||||| || |||||||||    
T  48390828 aacccatacccatacccaa 48390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 30682695 - 30682826
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||| ||| ||||||| ||| | ||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  30682695 tttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtttttataacatgaccattatcaaacaaaataacatgacatatcaa 30682794  T
Q  124 cgtaaaataattttctgtattcgggacgggtt 155  Q
    | |||| |||||||||  |||| |||||||||    
T  30682795 cataaagtaattttctacattcaggacgggtt 30682826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 22536061 - 22535834
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  22536061 ctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 22535962  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  |||  ||||            ||||||| ||| ||| ||| ||||| |||||||||||||||| ||||||||||||    
T  22535961 tatcaacataaaataattttttacatttaggacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaa 22535862  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    || | ||||||| || || |||||||||    
T  22535861 attggggaaaactcatacccatacccaa 22535834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 31127014 - 31126909
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||| |||||||||||||| | |||| |||||||| | |||||||||||| |||||||||||||| ||||||||||||||||    
T  31127014 ctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataatacgacaattatcaaacaaaataacatggcat 31126915  T
Q  119 atcaac 124  Q
    ||||||    
T  31126914 atcaac 31126909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 34025827 - 34026049
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||| ||||  || ||||||||||| | ||||||||||||| | || ||||||| |||| |||||||||||| |||||||||||| |||||||    
T  34025827 tttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataacatgacatatca 34025926  T
Q  123 acgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||||||||||| |  ||| |||||||            ||||| ||| |  ||||||||||||||||||||||||||||| ||||||||||||||     
T  34025927 acataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcgg 34026026  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||| || |||| ||||    
T  34026027 ggaaaacccatacccatatccaa 34026049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 20086882 - 20087013
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||  || ||||||||||| | ||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  20086882 tttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaagcaaaataacatgacatatca 20086981  T
Q  123 acgtaaaataattttctgtattcgggacgggt 154  Q
    || |||||||||||| |  ||| |||||||||    
T  20086982 acataaaataattttttacatttgggacgggt 20087013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 830884 - 831010
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaac 124  Q
    ||||||||| ||||||| ||||||||||||  | ||| ||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||||| |||    
T  830884 ttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagtttttataagacggcaattatcaaacaaaataacatagcatattaac 830983  T
Q  125 gtaaaataattttctgtattcgggacg 151  Q
     |||| |||||||||| ||||||||||    
T  830984 ataaagtaattttctgcattcgggacg 831010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 52572477 - 52572704
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  52572477 ctcactttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 52572576  T
Q  118 tatcaacgtaaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||| ||| |||| ||||||| |  ||| ||||||||            |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||     
T  52572577 tattaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgag 52572676  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||| || || |||||||||    
T  52572677 atcgaggaaaactcatacccatacccaa 52572704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 52198022 - 52198250
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaat-aacatggc 116  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||| ||||| ||    
T  52198022 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataaacatagc 52198121  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||||||||| ||||||| |  ||| || ||            ||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||    
T  52198122 atatcaacgtaaagtaattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttga 52198221  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     |||| | |||||||| || |||||||||    
T  52198222 gatcgggaaaaacccatacccatacccaa 52198250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 44172494 - 44172717
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||  | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  44172494 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataaca 44172593  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||     
T  44172594 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 44172693  T
Q  206 atcgaggaaaacccaaactcatac 229  Q
    |||| |||||||||| || |||||    
T  44172694 atcggggaaaacccatacccatac 44172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 44179194 - 44179417
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||  | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  44179194 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataaca 44179293  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||     
T  44179294 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 44179393  T
Q  206 atcgaggaaaacccaaactcatac 229  Q
    |||| |||||||||| || |||||    
T  44179394 atcggggaaaacccatacccatac 44179417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 44252615 - 44252842
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||  ||    
T  44252615 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 44252714  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| | |||| |||||            ||||||| ||| |||||||||||||  ||||| |||||||||||||||||| ||     
T  44252715 tatcaacataaagtagttttttatatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgag 44252814  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  44252815 atcggggaaaacccatacccatacccaa 44252842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 19111609 - 19111829
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||| ||| ||||||||||||  | ||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||| ||||| ||    
T  19111609 tttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagtttttataacacgaaaattatcaaacaaaataacatgacatat-aa 19111707  T
Q  124 cgtaaaataattttctgtattcgggacgggttcg------------aggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| |||||||||  |||  | ||||||| |             ||| ||||| ||||||| ||||| || |||| ||||||||||||||||||| |    
T  19111708 cataaagtaattttctacattttgtacgggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcggg 19111807  T
Q  212 gaaaacccaaactcatacccaa 233  Q
     ||||| |||||||||||||||    
T  19111808 aaaaactcaaactcatacccaa 19111829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 233
Target Start/End: Original strand, 44639168 - 44639369
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtat 143  Q
    ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |||||||||||| |  ||    
T  44639168 tgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacat 44639267  T
Q  144 tcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    | || ||            ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||   |||||||||| || |||||||    
T  44639268 ttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccataccc 44639367  T
Q  232 aa 233  Q
    ||    
T  44639368 aa 44639369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 257
Target Start/End: Complemental strand, 44953655 - 44953412
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  44953655 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 44953556  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| |||||||||| |||            ||  |||||||||||| ||||||||||||||||||||||||||||     
T  44953555 tatcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgag 44953456  T
Q  206 atcgaggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    |||| ||||||||      ||||||||  |||||||||||||||||||||||    
T  44953455 atcggggaaaacc------cataccca--aacccaaacccagtcaaaacggg 44953412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 39728539 - 39728766
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  |||||||||||| |||||||||||| ||||  ||||||||||| |||||||||||  ||    
T  39728539 ctcactttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaaaataacattaca 39728638  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| ||||||||||            || ||| ||||| ||||||| |||||||| |||||||||||| ||||||     
T  39728639 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgag 39728738  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| | ||||||||||||    
T  39728739 atcgaggaaaacctatactcatacccaa 39728766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 17146361 - 17146251
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||||||||| |    
T  17146361 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 17146262  T
Q  127 aaaataatttt 137  Q
    ||| |||||||    
T  17146261 aaagtaatttt 17146251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 29842184 - 29842402
Alignment:
Q  27 aacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacg 125  Q
    ||||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||| || ||||||     
T  29842184 aacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacaaatcaaca 29842283  T
Q  126 taaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgagga 213  Q
    |||| ||||||| |  ||| | |||            ||||||| ||| ||||||||||| | ||||||| |||||||||||||||||| |||||| |||    
T  29842284 taaagtaattttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatcg-gga 29842382  T
Q  214 aaacccaaactcatacccaa 233  Q
    ||||||| ||  ||||||||    
T  29842383 aaacccatacctatacccaa 29842402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 43582446 - 43582656
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||| | | ||||||||||| | ||||||||| | ||| || ||||||||| |||||||||||| ||    
T  43582446 ctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgataattatcaaacaaaataacatgaca 43582545  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcga-----------ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    ||||||  |||| ||||||| |  ||| |||||||||  ||           ||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  43582546 tatcaatataaagtaattttttacatttgggacgggtatgaatatgggttcgggtgggtacctacatacacgttacccgtctcatacccgtgttttgaaa 43582645  T
Q  207 tcgaggaaaac 217  Q
    ||| |||||||    
T  43582646 tcggggaaaac 43582656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 48306756 - 48306649
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||| ||||||||||| || ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||||| ||    
T  48306756 ctcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgacaattatcaaacaaattaacatgaca 48306657  T
Q  118 tatcaacg 125  Q
     |||||||    
T  48306656 aatcaacg 48306649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 10823904 - 10823794
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  10823904 acatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 10823805  T
Q  127 aaaataatttt 137  Q
    ||| |||||||    
T  10823804 aaagtaatttt 10823794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 23580701 - 23580814
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||||||| || || ||||||||||| | |||||||||||||   ||||||||| ||||| |||||||||||| |||||||||||  |||||||    
T  23580701 tttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaaaataacat-acatatca 23580799  T
Q  123 acgtaaaataatttt 137  Q
    || ||||||||||||    
T  23580800 acataaaataatttt 23580814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 233
Target Start/End: Complemental strand, 39655465 - 39655266
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattc 145  Q
    ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |||| || |||| |  |||     
T  39655465 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacattt 39655366  T
Q  146 gggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    | |||||||| | |            || |||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  39655365 gagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaa 39655266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 49025549 - 49025765
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||| ||||||  | ||||||||||| | ||||||||||||| | |||||||||| ||||  ||||||||||| |||||||||||  ||    
T  49025549 ctcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaattatcaaacaaaataacataaca 49025648  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgaggtagg------------tacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    |||||||  ||| ||||||| |  ||| |||||||||| | |||| |            |||||||||||  |||||||||||||||||||||||||||     
T  49025649 tatcaacacaaagtaattttttacatttgggacgggtttg-ggtatgggttcggatgtgtacctatatacctgttacccgtcccatacccgtgttttgag 49025747  T
Q  206 atcgaggaaaacccaaac 223  Q
    |||| |||||||||||||    
T  49025748 atcggggaaaacccaaac 49025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 44107013 - 44106786
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||| ||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  |    
T  44107013 actcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataac 44106914  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||| ||| |||| ||||||| |  ||| |||||            ||||||| ||||| ||||||||||  |||||| ||||||||||||||||||| |    
T  44106913 atattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaa 44106814  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     || | |||||| ||| ||||||||||||    
T  44106813 gattggggaaaa-ccatactcatacccaa 44106786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 7469998 - 7469771
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | ||||||||| ||| | |||||||||||| |||||||||||  ||    
T  7469998 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataaca 7469899  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    |||| || |||| || | || |  ||| |||||            ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  7469898 tatccacataaagtagtgttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 7469799  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||  |||||||||| || |||||||||    
T  7469798 atcagggaaaacccatacccatacccaa 7469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 23154243 - 23154058
Alignment:
Q  59 ctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcggg--------- 148  Q
    ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |||| ||||||| |  ||| |||             
T  23154243 ctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggataggtatg 23154145  T
Q  149 ---acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
       | |||||||  || |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| || |||||||||    
T  23154144 agtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaacccatacccatacccaa 23154058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 23547017 - 23546948
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||    
T  23547017 gggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 23546948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 29284361 - 29284431
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||| | |||||||| || |||||||||    
T  29284361 ggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaa 29284431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 30616332 - 30616278
Alignment:
Q  175 ctcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  30616332 ctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatac 30616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 34154291 - 34154381
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacat 113  Q
    ||||| |||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||    
T  34154291 tttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacat 34154381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 6738614 - 6738478
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||| ||||||||  | ||||||| ||| | |||  |||||||| | |||||||||| |||| | |||||||||| |||||||||||| ||    
T  6738614 ctcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacatgaca 6738515  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt 154  Q
    ||||||| |||| ||||||| |  ||| |||||||||    
T  6738514 tatcaacataaagtaattttttacatttgggacgggt 6738478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 10371323 - 10371250
Alignment:
Q  182 cccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    |||| |||||||||||||||||| || | |||||| ||| |||||||||||  |||||||||||||||||||||||    
T  10371323 cccgccccatacccgtgttttgagattggggaaaatccatactcataccca--aacccaaacccagtcaaaacggg 10371250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 42243418 - 42243482
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||||||| || ||||||||||| ||||||||| | |||||||||||||||||||||    
T  42243418 tatatcctcgttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaa 42243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 23910385 - 23910249
Alignment:
Q  97 atcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcgggacggg-ttcgaggtaggtacc--tatatactcg-ttacccgtcccata 192  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||  |||||||||||| || |  || || | |  ||||||| || | |||| || ||||    
T  23910385 atcaaacaaaataacatgacatatcaacataaagtaattttctacattcgggacgggtttaggtgtggggatctatatatacccgataacccatctcata 23910286  T
Q  193 cccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
     |||||||||||||||||||||||| |||||||||||    
T  23910285 tccgtgttttgaaatcgaggaaaactcaaactcatac 23910249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 10043331 - 10043275
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||| |||||||||| |  ||||||||||||| |||||||||    
T  10043331 cgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaa 10043275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 23580840 - 23580922
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||  || ||||||||||||| ||||||||||  ||||| ||||||||||||| | ||||||| || || |||||||||    
T  23580840 gggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcatacccatacccaa 23580922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 30904890 - 30904809
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||| | ||| ||||||||| ||||||||||||||||||    |||| ||||||||||||||||    
T  30904890 gggttcggggtgggtacctatatccccgt-acccgtcccgtacccgtgttttgaaatcagaaaaaagccaaactcatacccaa 30904809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 34154427 - 34154493
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaac 217  Q
    ||||||| ||| ||||||||||| || |||||||||  ||||||| ||||||||||||| |||||||    
T  34154427 gggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaac 34154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 48305715 - 48305650
Alignment:
Q  152 ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaac 217  Q
    |||||| ||| ||||||||||||| || ||| ||| |||||||||||||||||||| | |||||||    
T  48305715 ggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaac 48305650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 14208275 - 14208374
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||  | ||| || |||||| |||| | ||||||||||||| || | ||||||||||| |||||||||||| | ||||||||| | |||||||    
T  14208275 tttaacatttccttgactgaatgattttgttgctcctttaaatatcaatgaca-tttttataacatgacaattatcaaaccaaataacatagtatatcaa 14208373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 23547164 - 23547097
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacat 113  Q
    ||||||||| | |||||||||| || | |||||||||| |||| |||||||||||| |||||||||||    
T  23547164 atttagttgatcctttaaatataaatgctagtttttattaacatgacaattatcaaacaaaataacat 23547097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 29284232 - 29284315
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaa 129  Q
    ||||||||| |  ||||||||| || | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| ||||    
T  29284232 atttagttgatcttttaaatattaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaa 29284315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 3385917 - 3385875
Alignment:
Q  165 tacctatatactcgttacccgtcccatacccgtgttttgaaat 207  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||    
T  3385917 tacctatatcctcgttacctgtcccgtacccgtgttttgaaat 3385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 6738440 - 6738398
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||| |||||||||| || |||||||||    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaa 6738398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 1337080 - 1337125
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||||||||||||| | |||||||||||||  ||||||||||||    
T  1337080 gttacccgtcccatacacttgttttgaaatcggtgaaaacccaaac 1337125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 831040 - 831076
Alignment:
Q  170 atatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  831040 atatactcgttatccgtctcatacccgtgttttgaaa 831076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 26207318 - 26207358
Alignment:
Q  189 catacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||||||||||||||||| | |||| ||||||||||||    
T  26207318 catacccgtgttttgaaatcgggaaaaatccaaactcatac 26207358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 38347597 - 38347661
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||||||| || ||||| | ||||||||||||||| ||||| |||||| ||| ||||    
T  38347597 tatattctcgttacccatctcatactcatgttttgaaatcgagaaaaacgcaaacttatatccaa 38347661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 20399460 - 20399687
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattat-caagcaaaataacatggca 117  Q
    |||| ||||||||||||||||||||||||||| |||| | ||||||||||||| | ||||||||||||||||||||||||  ||  |||||||||||| |    
T  20399460 ctcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagtttttataacacgacaattatataaaaaaaataacatggta 20399559  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| || |||||||||            ||||||| ||| |||| |||||||| |||||||||||||||||||||||||||||    
T  20399560 tatcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaa 20399659  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    ||||  |||||||||||| |||||||||    
T  20399660 atcggagaaaacccaaacccatacccaa 20399687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 27932281 - 27932508
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| ||    
T  27932281 ctcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgaca 27932380  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            ||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  27932381 tatcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaa 27932480  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  27932481 atcggggaaaacccatacccatacccaa 27932508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 43113840 - 43113623
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||  ||||||||    
T  43113840 tttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttataacacgacaattatctaacaaaataacataacatatcaa 43113741  T
Q  124 cgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | | || || ||||||| ||||| |||||            ||||| ||| |||||||||||||  |||||||||||||| ||||||||||||||||| |    
T  43113740 catgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcggg 43113641  T
Q  212 gaaaacccaaactcatac 229  Q
     ||||||||| |||||||    
T  43113640 aaaaacccaatctcatac 43113623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 1012491 - 1012713
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| | || ||||||||||||  |||||||||| |||||||||||||||||||||    
T  1012491 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtactttttataacacagcaattatcaaacaaaataacatggcatatcaa 1012590  T
Q  124 cgtaaaata--attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcg 209  Q
    | |||| ||   |||| || |||||||||            ||||||| ||| ||||||||||||| | ||||||||||||||| | |||||| ||||||    
T  1012591 cataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcg 1012689  T
Q  210 aggaaaacccaaactcatacccaa 233  Q
     |||||||||||||||||||||||    
T  1012690 gggaaaacccaaactcatacccaa 1012713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 4230939 - 4230723
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||        
T  4230939 ctcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatg 4230840  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggttcgaggta--ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaa 215  Q
    ||||||| |||| ||||||| |  ||| |||||||||| | ||||  ||||||||||||| |||||| ||||||||||| ||||||||| |||| |||||    
T  4230839 tatcaacataaagtaattttttacatttgggacgggtttg-ggtatgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaa 4230741  T
Q  216 acccaaactcatacccaa 233  Q
    ||||| || |||||||||    
T  4230740 acccatacccatacccaa 4230723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 17469129 - 17469340
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||| |||| ||||||| ||||||||||||  | ||||||||||||| | ||| |||||||||| | |||||||||| |||||||||||||||||||||    
T  17469129 tttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagcttttataacaaggcaattatcaaacaaaataacatggcatatcaa 17469228  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| || ||||||| | | |||||            ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  17469229 cataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggg 17469328  T
Q  212 gaaaacccaaac 223  Q
    ||||||||||||    
T  17469329 gaaaacccaaac 17469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 35215378 - 35215474
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatat 120  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  35215378 tttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagtttttataacacgacaattatcaaacaaaataacatggcatat 35215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 24870244 - 24870033
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggca 117  Q
    ||||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | |||||||  ||||| |||||||||||| |||| ||||||| ||    
T  24870244 actcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagttttattaacatgacaattatcaaacaaattaacatgaca 24870145  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||||||            ||| ||| ||||||||||||| ||||||||||| |||||||||||||| ||    
T  24870144 tatcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaa 24870045  T
Q  206 atcgaggaaaac 217  Q
    |||| |||||||    
T  24870044 atcggggaaaac 24870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 34139321 - 34139453
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||  ||  | ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||  ||||||    
T  34139321 tttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataacatggtctatcaa 34139420  T
Q  124 cgtaaaataa-ttttctgtattcgggacgggtt 155  Q
    | |||| ||| |||| || ||||||||||||||    
T  34139421 cataaagtaatttttttgcattcgggacgggtt 34139453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 35215524 - 35215630
Alignment:
Q  126 taaaataattttctgtattcgggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactc 225  Q
    |||| |||||||||| |||||||||| ||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||    
T  35215524 taaagtaattttctgcattcgggacgagtttggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcg-ggaaaacccaaaatc 35215622  T
Q  226 atacccaa 233  Q
    ||||||||    
T  35215623 atacccaa 35215630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 45235938 - 45236144
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| || ||||||||| |||||||||||  |||||||    
T  45235938 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacataacatatca 45236037  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||||            ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||      
T  45236038 acataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcag 45236137  T
Q  211 ggaaaac 217  Q
    |||||||    
T  45236138 ggaaaac 45236144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 1063380 - 1063624
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| |  |||||||||||| | || ||||||| |||| |||||||||||| |||||||||| | |||||||    
T  1063380 tttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatgacaattatcaaacaaaataacaagacatatca 1063479  T
Q  123 acgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  | | |||| ||            ||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||||     
T  1063480 acataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgg 1063579  T
Q  211 ggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    | |||||||| || ||||||||   ||||| ||||||||||||||||    
T  1063580 gaaaaacccatacccataccca--cacccacacccagtcaaaacggg 1063624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 36132135 - 36132003
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||| |||||||| ||||| ||| |||||||||| | || | || ||||||||||||| |||||||||| |||||||||||| |||    
T  36132135 ctcattttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaatttttataacacggcaattatcaaacaaaataacatgacat 36132036  T
Q  119 atcaacgtaaaataattttctgtattcgggacgg 152  Q
    || ||| |||||||| |||||| |||||||||||    
T  36132035 at-aacataaaataactttctgcattcgggacgg 36132003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 17220585 - 17220807
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | ||| ||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  17220585 ctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 17220684  T
Q  118 tatcaacgtaaaataattttctgtattcgggac-------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    ||||||| |||| |||| || |  ||| |||||       ||||||| ||| ||||||||||||  | | | || ||||||||||||||||||||||||     
T  17220685 tatcaacataaagtaatcttttacatttgggacgggtatggggttcggggtgggtacctatataaccatcatccatcccatacccgtgttttgaaatcgg 17220784  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||| ||| || |||||||||    
T  17220785 ggaaaatccatacccatacccaa 17220807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 24568813 - 24568940
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||   |||||||||||||||  |||||||||| ||||||||| || ||||||||    
T  24568813 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaaataac-tgacatatcaa 24568911  T
Q  124 cgtaaaataattttctgtattcgggacgg 152  Q
    | |||| || ||||||  |||||||||||    
T  24568912 cataaagtagttttctccattcgggacgg 24568940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 32302928 - 32303156
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  32302928 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 32303027  T
Q  118 tatcaacgtaaaataattttctgt-attcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| ||||||| |||| |   ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  32303028 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 32303127  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     |||| |||||||||| || |||||||||    
T  32303128 gatcggggaaaacccatacccatacccaa 32303156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 29109042 - 29108815
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||| ||| | ||| ||||||||| | |||||||||| |||| |||||||||||| |||||||| ||| ||    
T  29109042 ctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatatgaca 29108943  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| ||||| ||||||| ||||||||||||||||||| |||||| ||    
T  29108942 tatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaa 29108843  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| | |||||||| || |||||||||    
T  29108842 atcgggaaaaacccatacccatacccaa 29108815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 2076054 - 2075917
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  2076054 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 2075955  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    ||||||| |||| ||||||| |  ||| ||||||||||    
T  2075954 tatcaacataaagtaattttttacatttgggacgggtt 2075917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 14186205 - 14186405
Alignment:
Q  31 tttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgtaaaa 130  Q
    ||||||||||| ||||||||||||  | ||||||||||||| | ||||||    ||||||||  ||||||| |||||||||||||||||| ||| ||||     
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagttt----aacacgactgttatcaaacaaaataacatggcatattaacataaat 14186300  T
Q  131 taattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacc 218  Q
    |||||||||  |||| ||||            ||||||  |||  |||||||||||  |||||||| |||||||||||||||||||||||||| |||||     
T  14186301 taattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaact 14186400  T
Q  219 caaac 223  Q
    |||||    
T  14186401 caaac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 37961024 - 37960955
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37961024 gtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaa 37960955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 29089589 - 29089672
Alignment:
Q  30 atttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacat 113  Q
    |||||||||||| ||| ||||||||| | ||||||||||||| ||||||||| ||||||| | ||||||||| |||||||||||    
T  29089589 atttgttagacccattaatttagttgctcctttaaatatcaatgatagttttaataacacaataattatcaaacaaaataacat 29089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 24927826 - 24928044
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| || | |||||||||||| |||||||||||  |||||| || |    
T  24927826 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacatatccacat 24927925  T
Q  127 aaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||| || |||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||| ||||||||||||| || |||  ||||    
T  24927926 aaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaa 24928025  T
Q  215 aacccaaactcatacccaa 233  Q
    |||||| || |||||||||    
T  24928026 aacccatacccatacccaa 24928044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 34776945 - 34777053
Alignment:
Q  30 atttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaa 128  Q
    |||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| ||||   |||||||||| |||||||||||  ||||||||| |||    
T  34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
Q  129 aataatttt 137  Q
    |||||||||    
T  34777045 aataatttt 34777053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 39445649 - 39445569
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||| |||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| || |||||||||    
T  39445649 gttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaa 39445569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 8545424 - 8545341
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaat 234  Q
    ||||||| ||| |||| |||||| | |||||| ||| ||||||||||||||||||||||  ||||||||||||| |||||||||    
T  8545424 gggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaacccaaacttatacccaat 8545341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 39445787 - 39445685
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||| ||| | | ||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  39445787 ctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 39445689  T
Q  118 tatc 121  Q
    ||||    
T  39445688 tatc 39445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 9642400 - 9642354
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9642400 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 5858706 - 5858645
Alignment:
Q  172 atactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||||||||||||||||||| |||||| | ||||||||||| |||||||||    
T  5858706 atacccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaa 5858645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 14155563 - 14155627
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||||||| ||  |||||||||||||||||||| | |||||||||||||||||||||    
T  14155563 tatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaa 14155627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 28977325 - 28977197
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| |  |||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  28977325 acatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 28977226  T
Q  127 aaaataattttctgtattcgggacgggtt 155  Q
    ||| || |||| |  ||| ||||||||||    
T  28977225 aaagtagttttttacatttgggacgggtt 28977197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 34021347 - 34021477
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||   |||||||| |||| | |||||||||||||   |||||||||||  | |||||||||||| |||||||||||  |||    
T  34021347 ctcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagtttttatataatgacaattatcaaacaaaataacat-acat 34021445  T
Q  119 atcaacgtaaaataattttctgtattcgggacg 151  Q
    |||||| | |||| |||||||| |||| |||||    
T  34021446 atcaacat-aaatgattttctgcattcaggacg 34021477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 40248434 - 40248380
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaac 217  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||    
T  40248434 ggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaac 40248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40248567 - 40248502
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat 84  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||||    
T  40248567 ctcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagtttttat 40248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 6388579 - 6388509
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | |||||||||||   |||||||||||| |||||| |||| |||||||| |||||||||    
T  6388579 ggtacctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccatacccaa 6388509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 30481496 - 30481418
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||| ||| ||||||||||| ||| |||| |||| ||||| ||| ||||||||||  | |||||||||||||||||    
T  30481496 gggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaactcatac 30481418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 14687445 - 14687494
Alignment:
Q  184 cgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||    
T  14687445 cgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaa 14687494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 29089811 - 29089876
Alignment:
Q  168 ctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| | ||| ||||| ||||||||||| |||||||||| ||| ||| ||||||||||||||    
T  29089811 ctatatacccattatccgtctcatacccgtgtcttgaaatcgaagaatacctaaactcatacccaa 29089876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 2075871 - 2075915
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccataccc 195  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||    
T  2075871 gggttcggggtgggtacctatatacccgttacccgtcccataccc 2075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 30904087 - 30904134
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcat 227  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  30904087 ttacccgtctcgtacccgtgttttgaaatcgagg-aaacccaaactcat 30904134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 10297479 - 10297542
Alignment:
Q  159 ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    ||||||||| ||||| | ||||||| ||||| | ||||| ||||||||||| ||||||||||||    
T  10297479 ggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaa 10297542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 15068637 - 15068582
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccca 232  Q
    ||||||| ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||    
T  15068637 cgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccataccca 15068582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 32392449 - 32392390
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    ||||| ||||| ||| ||| | ||||||||| ||||||||||||||||| ||||||||||    
T  32392449 ggtacatatattctcattatctgtcccatactcgtgttttgaaatcgagaaaaacccaaa 32392390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 5700369 - 5700427
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcg 209  Q
    ||||||||||| |||| |||||| | ||||||| ||| |||||| ||||||||||||||    
T  5700369 gggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcg 5700427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 12468254 - 12468216
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  12468254 tacccgtgtttcgaaatcgaggaaaacccaaattcatac 12468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 15173927 - 15173873
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| ||||||| ||||||||||| | ||||| ||||| |||||||||    
T  15173927 ttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaa 15173873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 11255071 - 11255015
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    |||||||||||||  |||| ||||||||||||||||||| |||| || ||||||||||    
T  11255071 ggtacctatatacctgttatccgtcccatacccgtgtttggaaagcg-ggaaaaccca 11255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 17084180 - 17084111
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    ||||| ||| |||| |||||| | ||||||||||| | |||||||||||| ||||||  |||||||||||    
T  17084180 gttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcggagaaaacccaaa 17084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 34777079 - 34777148
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    ||||||| ||| |||||||| ||||  ||||| ||| ||||||||||||||||| |||| | ||||||||    
T  34777079 gggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgggaaaaaccca 34777148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 27056604 - 27056548
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||||||||| ||  |||||||||| | ||||||||||| |||| ||||    
T  27056604 cgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaa 27056548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 28345504 - 28345576
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||| ||| ||| ||||||| |||||||||| |||  ||||||||||||| ||||| | |||| ||||||    
T  28345504 gggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatccaaac 28345576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 26564711 - 26564932
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||| |||||||||||||||||| || ||||||| |||| ||||||| ||||||||    
T  26564711 tttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagtttttataacacggcagttatcaaacaaactaacatgacatatcaa 26564810  T
Q  124 cgtaaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| || ||||||| ||| ||||||||            |||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||| |    
T  26564811 cataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggg 26564910  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    |||| | |||||||||||||||    
T  26564911 gaaagctcaaactcatacccaa 26564932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 230
Target Start/End: Complemental strand, 1724525 - 1724307
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||   |||||||||||||||  |||||||| | |||||||||||| ||||||||    
T  1724525 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatctaacaaaataacatgacatatcaa 1724426  T
Q  124 cgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| || ||||||| ||||||||||            |||||| ||| ||||||||||||  ||||||||||||||||||| ||||||||||||| |    
T  1724425 cataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggg 1724326  T
Q  212 gaaaacccaaactcatacc 230  Q
    |||||||||||| ||||||    
T  1724325 gaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 19534330 - 19534466
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||| |||    
T  19534330 ctcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagtttttataacacgacaattatcaaacaaaataacatgacat 19534429  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||| ||||||||||||||  ||||| ||||||||    
T  19534430 atcaacataaaataattttctacattcgtgacgggtt 19534466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 37107286 - 37107507
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||||| | |||||||||| |||||||||||| |||    
T  37107286 ctcattttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttataacatggcaattatcaaacaaaataacatgacat 37107385  T
Q  119 atcaacgtaaaataattttctgtattcggga-------cgg-----gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||| ||||||||        ||      |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  37107386 atcaacataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaa 37107485  T
Q  207 tcgaggaaaacccaaactcatac 229  Q
    | | |||||||||||||||||||    
T  37107486 ttg-ggaaaacccaaactcatac 37107507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 37348998 - 37349134
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||||||||||||| ||||||||| | ||||||||||||| | ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  37348998 ctcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagtttttataacgcgagaattatcaaacaaaataacatggcat 37349097  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  37349098 atcaacataaaataattttctgcattcgggacgggtt 37349134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 6482251 - 6482029
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6482251 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagtttttataacacgacaattatcaaacaaaataacatggcatatcaa 6482152  T
Q  124 cgtaaaata-attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
      |||| ||  |||| || ||| |||||            ||||||| ||| ||||| ||||||| | |||| ||||||||||||||||||| |||| |     
T  6482151 tataaattagtttttttgcatttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattgg 6482052  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| |||||||||    
T  6482051 ggaaaacccaaacccatacccaa 6482029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 425703 - 425818
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  425703 tttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagtttttataacatgacaattatcaaacaaaataacatggcatatcaa 425802  T
Q  124 cgtaaaataattttct 139  Q
    | |||| |||||||||    
T  425803 cataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 12825681 - 12825462
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||| ||||||| ||||||||||||| | |||||||||||||   ||||||||||||||||| ||||||||| ||||||||||||  ||    
T  12825681 ctcactttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagtttttataacacgataattatcaaacaaaataacatgatat 12825582  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||| | |||||||             |||||  ||| ||||| ||||||  ||||||||||||||||||||||||||||||    
T  12825581 atcaacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaa 12825482  T
Q  207 tcgaggaaaacccaaactca 226  Q
    ||| ||||||||||||||||    
T  12825481 tcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 7985337 - 7985205
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttt-ataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||||||||||| ||||||||||||| |  |||||||||||| | |||||||| ||||||||||||||||||| |||||||||||| | |||||    
T  7985337 tttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacgacaattatcaaacaaaataacatgacttatca 7985238  T
Q  123 acgtaaaataattttctgtattcgggacgggtt 155  Q
    || ||||||| ||||||| ||||||||||||||    
T  7985237 acataaaatacttttctgcattcgggacgggtt 7985205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 32596404 - 32596192
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||||||||  | ||||||||||||| ||| |||||| || | |||||||||||||| |||||||||||| | |||| |||||| ||    
T  32596404 ctcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagtttttataacatgacaattatcaaaccaaatgacatggtat 32596305  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| ||||||||||||||  ||||| |||            | ||| ||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  32596304 atcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaa 32596205  T
Q  207 tcgaggaaaaccc 219  Q
    ||| |||||||||    
T  32596204 tcggggaaaaccc 32596192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 39188395 - 39188519
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| || | |||||||| |||||||||| ||||||| |||||||||||| ||||||||    
T  39188395 tttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt-taacacgacagttatcaaacaaaataacatgacatatcaa 39188493  T
Q  124 cgtaaaataattttctgtattcggga 149  Q
    | ||||| |||||| || ||||||||    
T  39188494 cataaaacaattttatgcattcggga 39188519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 31752330 - 31752557
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||| ||||| || ||||||||||| |  |||||||||||  | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  31752330 ctcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgttagtttttattaacatgacaattatcaaacaaaataacatgaca 31752429  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| || ||||||||||||||||| |||| |||||||||||||||||    
T  31752430 tatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaa 31752529  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||| ||||    
T  31752530 atcggggaaaacccatacccatatccaa 31752557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 47550574 - 47550363
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  47550574 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 47550475  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            ||||||| ||| |||||||||||||  |||||||||||||||||||||||||||     
T  47550474 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgag 47550375  T
Q  206 atcgaggaaaac 217  Q
    |||| |||||||    
T  47550374 atcggggaaaac 47550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 9230164 - 9230293
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgttt--ctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatc 121  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||     
T  9230164 tttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaataacatgacatatt 9230263  T
Q  122 aacgtaaaataattttctgtattcgggacgggtt 155  Q
    || |     |||||||||| ||||||||||||||    
T  9230264 aatg----gtaattttctgcattcgggacgggtt 9230293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 13770670 - 13770539
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||||| |||||||||||||||||| | ||| |||||| || | | ||||||||||||||  ||||||||| |||||||||||||| ||| ||    
T  13770670 tttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgtttttataacacggtaattatcaaacaaaataacatggcttattaa 13770571  T
Q  124 cgtaaaataattttctgtattcgggacgggtt 155  Q
    | ||||||| |||| || ||||||||||||||    
T  13770570 cataaaatagttttatgcattcgggacgggtt 13770539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 47239580 - 47239403
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtat 143  Q
    ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| ||||||||| |||||||||||| |  ||    
T  47239580 tgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 47239481  T
Q  144 tcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcg 209  Q
    | |||||            ||||||  ||| || |||||||||| |||||||||||||||||||||||||| ||||||    
T  47239480 ttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatcg 47239403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 6382494 - 6382266
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  6382494 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 6382395  T
Q  118 tatcaacgtaaaataattttctgt-attcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| ||||||| |||| |   ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  6382394 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 6382295  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     ||||  ||||||||| || |||||||||    
T  6382294 gatcggagaaaacccatacccatacccaa 6382266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 7608844 - 7609071
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| || ||||||||| |||| |||||||||||| |||||||||||  ||    
T  7608844 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgacaattatcaaacaaaataacataaca 7608943  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| || | || |||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  7608944 tatcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 7609043  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  7609044 atcggggaaaacccatacccatacccaa 7609071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 42774640 - 42774754
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||  || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| |||||||    
T  42774640 tttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 42774739  T
Q  123 acgtaaaataatttt 137  Q
    || |||| |||||||    
T  42774740 acataaagtaatttt 42774754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 28695357 - 28695252
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||| ||||| ||||||||||| | |||||||||| || |||||||||||||||  ||||||||||||  |||||||||| |||||||||    
T  28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttataacgtgacaattatcaaataaaataacattgcatatcaa 28695258  T
Q  124 cgtaaa 129  Q
    | ||||    
T  28695257 cataaa 28695252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 29755553 - 29755456
Alignment:
Q  16 atactcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacat 113  Q
    ||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||| | |||| |||||||||||  ||||||||| |||||||||||    
T  29755553 atactcattttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgtttataacacggtaattatcaaacaaaataacat 29755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 48459355 - 48459569
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||| ||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  48459355 ctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 48459454  T
Q  118 tatcaacgtaaaataattttctgtattcggg------------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||            | ||||||| ||| |||||||||||||  ||||||||| |||||||| |||||||||    
T  48459455 tatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaa 48459554  T
Q  206 atcgaggaaaaccca 220  Q
    |||| ||||||||||    
T  48459555 atcggggaaaaccca 48459569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 5902835 - 5902621
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||| ||  ||    
T  5902835 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataagataaca 5902736  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  5902735 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 5902636  T
Q  206 atcgaggaaaaccca 220  Q
    |||| ||||||||||    
T  5902635 atcggggaaaaccca 5902621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 39375160 - 39375379
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaac 124  Q
    |||||||||||| ||  |||| ||||||||||| |||||||||| |  | |||||||||||||||| |||||||||| ||||||||||||  | ||||||    
T  39375160 ttaacatttgttcgattgatttatttagttgttcctttaaatattagtggtagtttttataacacggcaattatcaaacaaaataacatg--acatcaac 39375257  T
Q  125 gtaaaataa-ttttctgtattcgggacgggttcga------------ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    ||||| ||| |||| || | | |||||||||| ||            ||| | || |||||||| |||||||||||| |||||||| ||||||||||| |    
T  39375258 gtaaagtaatttttttgcaattgggacgggtttgagtatgtgattggggtggatatctatatacccgttacccgtcctatacccgtattttgaaatcggg 39375357  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    ||||| ||||||||||| ||||    
T  39375358 gaaaagccaaactcatatccaa 39375379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 11028094 - 11028174
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  11028094 gttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaa 11028174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 39046827 - 39046962
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||  | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  39046827 ctcattttaacatttgttagacggaatgatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-aca 39046925  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt 154  Q
    ||||||| |||| ||||||| |  ||| |||||||||    
T  39046926 tatcaacataaagtaattttttacatttgggacgggt 39046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 44317407 - 44317636
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||||||||  | | ||||||||| | |||||||||||||   |||||||||| |||| |||||||||||| |||||||||||  |    
T  44317407 actcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaaaataacataac 44317506  T
Q  117 atatcaacgtaaaataattttctgt-attcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttg 203  Q
    |||||||| |||| || |||| |   ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||| |    
T  44317507 atatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcg 44317606  T
Q  204 aaatcgaggaaaacccaaactcatacccaa 233  Q
    | |||| |||||||||| || |||||||||    
T  44317607 agatcggggaaaacccatacccatacccaa 44317636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 32585362 - 32585566
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaaga-tagttttta-taacacgacaattatcaagcaaaataacatggc 116  Q
    |||| ||||||| ||||||||| || ||||||||||| | ||||||||||||| || ||||||||| ||||| |||||||||||| |||||||||| | |    
T  32585362 ctcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattatcaaacaaaataacaagac 32585461  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||| ||| |||| ||| ||| |  ||| |||||            ||||||  ||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  32585462 atataaacataaagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttga 32585561  T
Q  205 aatcg 209  Q
    |||||    
T  32585562 aatcg 32585566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 43893102 - 43893328
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  43893102 ctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 43893201  T
Q  118 tatcaacgtaaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||            |||| ||| | ||||||||||| ||||||||||||||||||||||||| ||     
T  43893202 tatcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgag 43893301  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| || ||||||| || |||||||||    
T  43893302 atcg-gggaaacccatacccatacccaa 43893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 11123091 - 11122863
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | || ||||||| |||| ||||||||| || ||||||||||   |    
T  11123091 actcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgacaattataaaacaaaataacaaaac 11122992  T
Q  117 atatcaacgtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||||||| |||| || |||| |  ||| |||||||||| |||            || ||||||||||||| ||||||||||||||||||||||||| ||    
T  11122991 atatcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 11122892  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     ||||  ||||||||| || |||||||||    
T  11122891 gatcggagaaaacccatacccatacccaa 11122863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 31918780 - 31918552
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  31918780 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 31918681  T
Q  118 tatcaacgtaaaata-attttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| |||| ||  |||| |  ||| |||||            ||||||| ||| |||| |||||||| | |||| |||||||||||||||||| ||    
T  31918680 tatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcga 31918581  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     |||| |||||||||| ||||||||||||    
T  31918580 gatcggggaaaacccatactcatacccaa 31918552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 42299670 - 42299886
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||  |  ||||||||||| |  ||||||||||||   |||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  42299670 tttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagtttttattaacaagacaattatcaaacaaaataacatggcatatca 42299769  T
Q  123 acgtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| || |||| | |||| |||||| ||| |||            || ||||||||||||| |||||||||| ||||| ||||||||||||||||     
T  42299770 acataaagtactttt-tatatttgggacgtgtttgagtatgggttcagggtgggtacctatatacccgttacccgt-ccata-ccgtgttttgaaatcgg 42299866  T
Q  211 ggaaaacccaaactcatacc 230  Q
    |||||| ||| || ||||||    
T  42299867 ggaaaatccatacccatacc 42299886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 55826699 - 55826617
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||| |||||| || |||| |||||||||| ||||||| ||||    
T  55826699 gggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccatactcatatccaa 55826617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 21423744 - 21423962
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||| ||  ||||||||| |    
T  21423744 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataacatatcaacat 21423843  T
Q  127 aaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||| || |||| |  ||| |||||            ||||| | ||| ||||||||||||| ||||||||||| ||||||||||||| || || | ||||    
T  21423844 aaagtagttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaa 21423943  T
Q  215 aacccaaactcatacccaa 233  Q
    |||||| || |||||||||    
T  21423944 aacccatacccatacccaa 21423962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 43309528 - 43309580
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  43309528 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatac 43309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 15987455 - 15987372
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaa 107  Q
    |||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||    
T  15987455 ttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 4741292 - 4741210
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| |  |||| ||||||||||||| |||||| |||||||||||||| |||||||||| ||||    
T  4741292 gggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaa 4741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 15987338 - 15987256
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| |||| |||||||| |||||||| ||||||||||||||||| |||||  ||||||| || || |||||||||    
T  15987338 gggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaa 15987256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 25941157 - 25941239
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||| | | ||||||| ||||| ||||||||||||||||||| | ||||||||||| ||| |||||    
T  25941157 gggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaa 25941239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 19883131 - 19883054
Alignment:
Q  152 ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    |||||| ||| | ||||||||| | |||||||| |||| || ||||||||| |||||| |||||||||||||||||||    
T  19883131 ggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactcatac 19883054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 4766529 - 4766422
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttt--ataacacgacaattatcaagcaaaataacatggcatatc 121  Q
    ||||||||||||||||   | ||||||||||  | ||||||||||||| ||||||||||   ||||| ||||||||||||  ||||||||||  ||||||    
T  4766529 tttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattatcaaataaaataacataacatatc 4766430  T
Q  122 aacgtaaa 129  Q
    ||| ||||    
T  4766429 aacataaa 4766422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 11027955 - 11028051
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||  | ||||||||||| | |||||||||| ||   |||||||||| |||| |||||||||||| |||||||||||  ||||||||    
T  11027955 acatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgacaattatcaaacaaaataacataacatatcaa 11028051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 12505577 - 12505537
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  12505577 tacccgtgttttgaaatcggggaaaacccaaactcataccc 12505537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 13015446 - 13015335
Alignment:
Q  50 tagttgtttctttaaatatcaaagatagtttttataacacgacaat------tatcaagcaaaataacatggcatatcaacgtaaaataattttctgtat 143  Q
    |||||| | ||||||||||||| | |||||||||||||| || |||      |||||| |||||||||||| ||||||||| |||||||||||| |  ||    
T  13015446 tagttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 13015347  T
Q  144 tcgggacgggtt 155  Q
    ||| ||||||||    
T  13015346 tcgagacgggtt 13015335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 29527831 - 29527903
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||| ||| ||||| ||||| | ||||||||||| | ||||||| ||||||||||| |||||||||||||    
T  29527831 gggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaac 29527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 41915060 - 41914992
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    ||||| ||||| | |||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||    
T  41915060 ggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactcataccc 41914992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 4737944 - 4737901
Alignment:
Q  185 gtcccatacccgtgttttgaaatcgaggaaaacccaaactcata 228  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  4737944 gtcccatacccatgttttaaaatcgaggaaaacccaaactcata 4737901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 24637078 - 24637149
Alignment:
Q  51 agttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||| |||||||| |||||| || |||| ||||| || |||||||||||| | ||||||||||||||||||    
T  24637078 agttgcttctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatca 24637149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 10302103 - 10302185
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||  | ||||||||||| |||||||||  |||||||||| |||||||| |||| |||||||||    
T  10302103 gggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaa 10302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 14606001 - 14605919
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| |  |||||||||| | ||||||| |||||||||||  |||||||||||| |||||||||    
T  14606001 gggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaa 14605919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 33615393 - 33615323
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | |||||||||||||||||| || || | ||||||||||||||  |||| |||||||||    
T  33615393 ggtacctatatccccgttacccgtcccatacctgttttattaaatcgaggaaaacttaaacccatacccaa 33615323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 37349171 - 37349213
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaa 37349213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 39046983 - 39047049
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||||||||| ||||||  ||||||||||||||||| ||||| | |||||||||| || |||||    
T  39046983 ggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccatacccatac 39047049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 47103757 - 47103835
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||| ||| ||||| ||||| | ||||||||| ||| ||||||| ||||||||| | ||||||||||||| |||||    
T  47103757 gggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatac 47103835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 36306814 - 36306875
Alignment:
Q  161 taggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    ||||||||||||| | ||||| ||||| |||||||||||||||||||||  ||||| |||||    
T  36306814 taggtacctatatccccgttaaccgtctcatacccgtgttttgaaatcggagaaaatccaaa 36306875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 3737819 - 3737851
Alignment:
Q  175 ctcgttacccgtcccatacccgtgttttgaaat 207  Q
    |||||||||||||||||||||||||||||||||    
T  3737819 ctcgttacccgtcccatacccgtgttttgaaat 3737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 55826814 - 55826734
Alignment:
Q  50 tagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaa 129  Q
    |||||| | ||||||||||||| | |||||||||| |||  |||||||||||| |||||||||||  ||||||||| ||||    
T  55826814 tagttgatcctttaaatatcaatggtagtttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaa 55826734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 7985174 - 7985119
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||||||||||| |||||||||||||  ||||| ||||||| ||||||||    
T  7985174 gttatccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaa 7985119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 16575143 - 16575206
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    ||||| ||||| ||||||| || |||| |||||| ||||| ||||||||||| |||||||||||    
T  16575143 ggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaatacccaaactca 16575206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 45065295 - 45065350
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||| ||||||| |||||||||||||||||||| ||||  ||||||||    
T  45065295 gttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaa 45065350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 19534476 - 19534518
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccataccc 195  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  19534476 gttcgaggtgggtacctatatacctgttacccgtcccataccc 19534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 21956890 - 21956808
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| || |||||||| | |||||| | | || |||||||||||| ||||||   |||||||||||||||||||||    
T  21956890 gggttcggggtgggcacctatatccccgttactcattccgtacccgtgttttaaaatcggaaaaaacccaaactcatacccaa 21956808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 37246904 - 37246946
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||| ||||||||||||| |||||| |||||||||    
T  37246904 tacccgtgttttaaaatcgaggaaaatccaaacacatacccaa 37246946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 1724308 - 1724263
Alignment:
Q  188 ccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| ||||||||||||| | ||||||||||| |||||||||    
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaa 1724263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 1866597 - 1866544
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccca 232  Q
    ||||||||| | ||||||| ||||||||||| | |||||||| |||||||||||    
T  1866597 ttacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcataccca 1866544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 39086185 - 39086258
Alignment:
Q  160 gtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||||| | |||||||||| ||  |||| |||| ||||||||  |||||| |||||||||| ||||    
T  39086185 gtaggtacctatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaactcatatccaa 39086258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 11173020 - 11173064
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  11173020 ttacctgtcccgtacccgtattttgaaatcggggaaaacccaaac 11173064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 15733576 - 15733536
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaac 217  Q
    ||||||||||| | ||||||| |||||||||||||||||||    
T  15733576 cgttacccgtctcgtacccgtattttgaaatcgaggaaaac 15733536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 19548985 - 19548945
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaaccc 219  Q
    ||||||||||| |||| |||||||||||||| |||||||||    
T  19548985 ttacccgtcccgtacctgtgttttgaaatcggggaaaaccc 19548945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 29035759 - 29035684
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatc 121  Q
    |||||| ||||||| ||||||||| || || |  |||||||||| |||||||||||| | |||||| ||||||||||    
T  29035759 tgatttggttgttt-tttaaatattaatgacacattttataacatgacaattatcaaactaaataatatggcatatc 29035684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 29047892 - 29047817
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatc 121  Q
    |||||| ||||||| ||||||||| || || |  |||||||||| |||||||||||| | |||||| ||||||||||    
T  29047892 tgatttggttgttt-tttaaatattaatgacacattttataacatgacaattatcaaactaaataatatggcatatc 29047817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 31782644 - 31782704
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||| ||||| | ||||||| || || ||||||| ||||||||||| |||||||||||||    
T  31782644 ggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaac 31782704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 36919156 - 36919224
Alignment:
Q  165 tacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||| | |||||| ||||| |||| | |||||| || ||| ||||||| |||||||||||||||    
T  36919156 tacctatatccacgttactcgtcctatacacatgttttaaagtcggggaaaactcaaactcatacccaa 36919224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 12678297 - 12678087
Alignment:
Q  35 ttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataat 134  Q
    ||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||    
T  12678297 ttagaccgattgatttagttgctcctttaaatatcaatgataatttttataacacgacaattatcaaacaaaataacatgacatatcaatataaaataat 12678198  T
Q  135 tttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    |||||  ||||||||||            |||||  ||| ||||||||||||| | |||||||||||||||| |||| ||||||||| ||||||| ||||    
T  12678197 tttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaa 12678098  T
Q  223 ctcatacccaa 233  Q
    |||||||||||    
T  12678097 ctcatacccaa 12678087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 14032425 - 14032561
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||    
T  14032425 ctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaacaaaataacatgacat 14032524  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||| |||| ||||||| || ||| ||||||||||    
T  14032525 atcaacataaagtaattttatgcatttgggacgggtt 14032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 14505955 - 14506171
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||| |||||||||||||| | |||| |||||||| | ||||||||||||||||||||||||||| ||||||||| || |||    
T  14505955 ctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataacacgacaattatcaaacaaaataacgtgacat 14506054  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    ||||||  ||| || ||||||| ||| |||||            ||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  14506055 atcaacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaa 14506154  T
Q  207 tcgaggaaaacccaaac 223  Q
    ||| |||||||||||||    
T  14506155 tcggggaaaacccaaac 14506171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 24603075 - 24602859
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||     
T  24603075 ctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagtttttataacacgtcaattatcaaacaaaataacatggcac 24602976  T
Q  119 atcaacgtaaaataattttctgtattc------------gggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||  ||||            || | ||||||| ||| |||| ||||||||  |||||||||| ||||||| ||||||||||    
T  24602975 atcaacataaagtaattttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaa 24602876  T
Q  207 tcgaggaaaacccaaac 223  Q
    ||  |||||||||||||    
T  24602875 tctgggaaaacccaaac 24602859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 24225575 - 24225815
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  24225575 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 24225674  T
Q  127 aaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||||||||||| |  ||| ||||||||||            || ||| ||||||||||||| |||||||||||||||| ||||||||||| |||| ||||    
T  24225675 aaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaa 24225774  T
Q  215 aacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    || ||| || ||||||||  |||||||||||| ||||||||||    
T  24225775 aatccatacccataccca--aacccaaacccaatcaaaacggg 24225815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 5863604 - 5863376
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||| ||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| || ||||||||| |||||||||||  |    
T  5863604 actcactttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacataac 5863505  T
Q  117 atatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||||||| ||||||| |||| |  ||| ||||||||||            |||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  5863504 atatcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttga 5863405  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| |||||||||| || |||||||||    
T  5863404 aatcggggaaaacccatacccatacccaa 5863376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 2367194 - 2367421
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||  | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  2367194 ctcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 2367293  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    |||| || |||| ||||||| |  ||| ||||||||||            || ||| ||||| ||||||| ||||||||||||||||||||||||||||     
T  2367294 tatccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 2367393  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  2367394 atcggggaaaacccatacccatacccaa 2367421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 10142738 - 10142511
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  10142738 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 10142639  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            | ||||| ||| ||||||||||||| ||||||| ||||||||||||| ||||||     
T  10142638 tatcaacataaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgag 10142539  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  10142538 atcggggaaaacccatacccatacccaa 10142511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 7394101 - 7393992
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||  ||||||||| |||||||| |||  ||| |||    
T  7394101 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 7394002  T
Q  124 cgtaaaataa 133  Q
    | ||||||||    
T  7394001 cataaaataa 7393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 14411052 - 14410959
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataaca 112  Q
    |||| |||||||||||||||||||||||||||||||  | ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  14411052 ctcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggtttttataacacgacaattatcaaacaaaataaca 14410959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 27534561 - 27534779
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||||||||| |    
T  27534561 acatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 27534660  T
Q  127 aaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaa 214  Q
    ||| || |||| |  ||| ||||||||            |||| ||| ||||||||||||| ||||||||||||||||||||||||| || |||| ||||    
T  27534661 aaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaa 27534760  T
Q  215 aacccaaactcatacccaa 233  Q
    ||| || || |||||||||    
T  27534761 aactcatacccatacccaa 27534779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 32853712 - 32853939
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  |||||||||||| | |||||||||| |||| | |||||||||| |||||||||||  ||    
T  32853712 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataaca 32853811  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| ||||||||||            || ||| ||||||||||||| ||||||||||||||||||||||||||||     
T  32853812 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 32853911  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||| ||||    
T  32853912 atcggggaaaacccatacccataaccaa 32853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 30816131 - 30816236
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||||||||||||||||||||| || | |||||||| |||| | |||||||||||||||| |||||||| | |||||||||||  ||||||||    
T  30816131 tttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagtttttataacacggcaattatccaacaaaataacatcacatatcaa 30816230  T
Q  124 cgtaaa 129  Q
    | ||||    
T  30816231 cataaa 30816236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 12141252 - 12141480
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||| | |||||||||||| |||||||||||  |    
T  12141252 actcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataacataac 12141351  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
     ||||||| |||||||||||| |  ||| |||||            ||||||| ||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  12141352 gtatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttga 12141451  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     || | |||||||||| || | |||||||    
T  12141452 gattggggaaaacccatacccgtacccaa 12141480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 32532553 - 32532631
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  32532553 gggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatac 32532631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 230
Target Start/End: Original strand, 27738666 - 27738864
Alignment:
Q  45 tgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtat 143  Q
    ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||  |||||||||||  ||||||||| |||| ||||||| |  ||    
T  27738666 tgatttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacat 27738765  T
Q  144 tcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    | |||||            ||||||| ||| ||||| ||||||   |||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  27738766 ttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacc 27738864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 11762342 - 11762434
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgtaaaataattttct 139  Q
    ||||||||| | || |||||||||| | ||||||||||||||||||||||||  | |||||||||||||||||||||| |||| |||||||||    
T  11762342 atttagttgctcctataaatatcaatggtagtttttataacacgacaattatataacaaaataacatggcatatcaacataaagtaattttct 11762434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 12309452 - 12309685
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||  | ||||||| |||   ||||||||||||| ||||||      || | |||||||||||| |||||||||||| ||||||||    
T  12309452 tttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatagt------aatatgacaattatcaaacaaaataacatgacatatcaa 12309545  T
Q  124 cgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| ||||||| |  ||| ||||||||||            || ||| ||||| |||||||  ||||||||| |||||||||||||||||||||  |    
T  12309546 cataaagtaattttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagg 12309645  T
Q  212 gaaaacccaaactcatacccaataacccaaacccagtcaaaa 253  Q
    ||| ||||| || ||||||||  |||||||||||||||||||    
T  12309646 gaatacccatacccataccca--aacccaaacccagtcaaaa 12309685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 14245121 - 14245211
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatg 114  Q
    |||||||||| ||||||||| ||||||||| | | |||||||||| || | |||||||||||||||||||||| |||| ||||||||||||    
T  14245121 tttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagtttttataacacgacaattttcaaacaaaataacatg 14245211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 28079771 - 28079689
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||| | ||||||||||||| ||||| ||||||||||||| ||||||||||||| |||||||||    
T  28079771 gggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaa 28079689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 14254832 - 14254937
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||| ||||||||| ||||||| | | | ||||||||||||| |||||||||||||||||  ||| | |||| |||||||||||| ||||||||    
T  14254832 tttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagtttttataacacatcaaatttcaaacaaaataacatgacatatcaa 14254931  T
Q  124 cgtaaa 129  Q
    | ||||    
T  14254932 cataaa 14254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 20349079 - 20349156
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  20349079 gttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcatacc 20349156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 14410930 - 14410858
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||    
T  14410930 gggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 10188293 - 10188174
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||| | |||||||||||   |    
T  10188293 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcgaacaaaataacataata 10188194  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| ||||||||||||    
T  10188193 tatcaacataaaataatttt 10188174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 3484143 - 3483916
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | ||||||||| ||| | ||||||||| || |||||||||||  ||    
T  3484143 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatgaaacaaaataacataaca 3484044  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    |||| || |||| || |||| |  ||| |||||            ||||||| ||| ||||||||||||| |||||||| |||||||||||||||| ||     
T  3484043 tatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgag 3483944  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  3483943 atcggggaaaacccatacacatacccaa 3483916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 30986284 - 30986348
Alignment:
Q  169 tatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  30986284 tatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaa 30986348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 9442455 - 9442525
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||| || |||||||||    
T  9442455 ggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaa 9442525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 18908918 - 18908984
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||| ||||| || ||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  18908918 ggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactcatac 18908984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 256555 - 256485
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||| | | ||||||||| | ||||| ||||||||||||| ||||||| |||||||||||||||    
T  256555 ggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaa 256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 15498349 - 15498419
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| | ||||| ||| ||||||||||||||||||||| |||||||||| |  |||||||||    
T  15498349 ggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccatatccatacccaa 15498419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 10188126 - 10188073
Alignment:
Q  180 tacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  10188126 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaa 10188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 32053113 - 32053170
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||| ||||||||||    
T  32053113 ggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaaccca 32053170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 13769097 - 13769164
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    |||||||||||   ||||||||||||||||||| ||||||||| ||| |||||||| |||| ||||||    
T  13769097 ggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacc 13769164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 29200094 - 29200024
Alignment:
Q  52 gttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||| |||||| |||||| || |||| ||||| || |||||||||||| | ||||||||||||||||||    
T  29200094 gttgttcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatca 29200024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 20611031 - 20610978
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||||||    
T  20611031 cgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccatacc 20610978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 32532432 - 32532497
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat 84  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||  | ||||||||||    
T  32532432 ctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttat 32532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 9458678 - 9458758
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||| ||||| ||||| | ||||| | ||||| ||||||| ||||||||| | ||||| | |||||||||||||||    
T  9458678 gttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaa 9458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 11762473 - 11762525
Alignment:
Q  166 acctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacc 218  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||| | ||||||    
T  11762473 acctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacc 11762525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 29199960 - 29199888
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||| ||||| ||| ||||| |  |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  29199960 gggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaac 29199888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 32959873 - 32959945
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||| ||| | ||||||||| | |||||||||| || |||||||||||||||||   |||||||||||||    
T  32959873 gggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaac 32959945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 32054271 - 32054220
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    |||| |||| ||||||| |||||||||||| || ||||||||||||||||||    
T  32054271 ttactcgtctcatacccatgttttgaaatcaagaaaaacccaaactcatacc 32054220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 34178392 - 34178347
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatc 208  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||    
T  34178392 ggtacctatatccttgttacccgtctcgtacccgtgttttgaaatc 34178347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 9402628 - 9402672
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    |||||||||||  ||||| ||||||||||||| ||||||||||||    
T  9402628 gttacccgtcctgtacccatgttttgaaatcggggaaaacccaaa 9402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 14034527 - 14034587
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||||||| ||||||||||| |||||  |||| || |||||| ||||||| |||||    
T  14034527 ggtacctatatacccgttacccgtctcatacttgtgtcttaaaatcggggaaaactcaaac 14034587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 6028109 - 6027892
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttt-ataacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||     
T  6028109 ctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgacaattatcaaacaaaataacatggct 6028010  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| ||||||| ||||||| |||| ||||            ||||||| ||| |||||||||||||  |||||||||| ||||||| |||||| ||    
T  6028009 tatcaacataaaatacttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaa 6027910  T
Q  206 atcgaggaaaacccaaac 223  Q
    |||| |||||||||||||    
T  6027909 atcggggaaaacccaaac 6027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 37106568 - 37106788
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||   |    
T  37106568 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatat-a 37106666  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    ||||||| |||| ||||||| |  ||| |||||||||      |||  || ||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  37106667 tatcaacataaagtaattttttacatttgggacgggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggg 37106766  T
Q  212 gaaaacccaaactcatacccaa 233  Q
    ||||||||| || |||||||||    
T  37106767 gaaaacccatacccatacccaa 37106788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 31942400 - 31942178
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||     
T  31942400 tttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataacatggcatatcag 31942301  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtg-ttttgaaatcga 210  Q
    | |||| || ||||||| ||| | |||            ||||| | ||| ||||| |||||||  |||||||||| |||||||||| ||||||||||||    
T  31942300 cataaagtagttttctgcatttgtgacaggtttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcga 31942201  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    ||| ||||||||| |||| ||||    
T  31942200 ggataacccaaacccatatccaa 31942178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 257
Target Start/End: Complemental strand, 13705581 - 13705332
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||| || || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  13705581 ctcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 13705482  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| |||||||    ||| |||||            ||||||| ||| ||||||||||||| ||||||| ||| |||||||||||||||||    
T  13705481 tatcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaa 13705382  T
Q  206 atcgaggaaaacccaaactcatacccaataacccaaacccagtcaaaacggg 257  Q
    |||| ||||||| || || ||||||||   |||||||||| |||||||||||    
T  13705381 atcggggaaaactcatacccataccca--tacccaaaccctgtcaaaacggg 13705332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 14540655 - 14540874
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||| |||||||||||||| | |||||||||||     ||||||||||||||||||||||||||| |||||||||||| |||    
T  14540655 ctcactttaacatttgttagactgattgatttagttgctcctttaaatatcg----tagtttttataacacgacaattatcaaacaaaataacatgacat 14540750  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| |||| |||||||||   |||||||||| || |||            || ||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  14540751 atcaacataaagtaattttctacgttcgggacggatttgagtatggattccgagtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaa 14540850  T
Q  207 tcgaggaaaacccaaactcatacc 230  Q
    ||| ||||||| | || |||||||    
T  14540851 tcggggaaaactccaattcatacc 14540874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 19105060 - 19104830
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||||||| |||||||||| |  |||||||||| |   |||||||||||||||| ||||||| || |||||||||||| ||     
T  19105060 ctcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagtttttataacacggcaattattaaacaaaataacatgacac 19104961  T
Q  119 atcaacgtaaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccata----cccgtgtttt 202  Q
     ||||| |||| |||||||||| ||||||||||||            |||||||| | ||||||||||| |||||| | |||||||    |||||||||     
T  19104960 gtcaacataaagtaattttctgcattcgggacgggtttgagtatggattcgaggtggatacctatatacccgttacacatcccatacaggcccgtgtttg 19104861  T
Q  203 gaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| |||||||||||||||||||||||    
T  19104860 gaaatcggggaaaacccaaactcatacccaa 19104830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 12194042 - 12193820
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || |||| |||||| | ||||||||||||| | ||||||||| ||||| || ||||||||| |||||||||||| |||||||    
T  12194042 tttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacatgacatatca 12193943  T
Q  123 acgtaaaataattttctgtattcgggacggg------------ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| ||||||||            |||||||| |||| |||||||| | |||||||||||||||||||||| ||||||||     
T  12193942 acataaagtaattttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgg 12193843  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    | ||||| || ||||||||||||    
T  12193842 gaaaaacacatactcatacccaa 12193820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 37999352 - 37999578
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| ||||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  37999352 ctcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 37999451  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||||            ||||| ||| ||||| ||||||| ||||||||||| ||||||||||||||||     
T  37999452 tatcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgag 37999551  T
Q  206 atcgaggaaaacccaaactcataccca 232  Q
    |||| |||||||||| || ||||||||    
T  37999552 atcggggaaaacccatacccataccca 37999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 7314863 - 7314641
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||| ||||| || ||||||||||| | ||||||||||||| ||||||||||| ||||| || | ||||||| |||||||||||| |||||||    
T  7314863 tttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgatatttatcaaacaaaataacatgacatatca 7314764  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||||||||||| |  ||| |||||            ||||||| ||| || |||||||||| ||||||||||||||||| ||| |||| ||||||     
T  7314763 acataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcgg 7314664  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||| || |||| ||||    
T  7314663 ggaaaacccatacccatatccaa 7314641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 16226941 - 16226759
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||| ||||||| ||||||||||||| |  |||||||||||| | |||||||||||||||||||||||||||  ||||||||||| || |||||    
T  16226941 tttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagtttttataacacgacaattatcaaataaaataacatgacaaatcaa 16226842  T
Q  124 cgtaaaataattttctgtattcgggacgggttcgaggta----ggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    | | || | | |||||| |||| | ||||||| | ||||     |||||||||||| ||||||||||||||||||| ||||||||    
T  16226841 catgaagt-agtttctgcattccgaacgggtttg-ggtatgagagtacctatatacccgttacccgtcccatacccttgttttga 16226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 13830605 - 13830831
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| | ||| |||||||||||| |||||||||||  ||    
T  13830605 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgacaattatcaaacaaaataacataaca 13830704  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||     
T  13830705 tatcaacataaagtaattttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgtta-ccgtcccatacccgtgttttgag 13830803  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||| || |||||||||    
T  13830804 atcgaggaaaacccatacccatacccaa 13830831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 8916157 - 8915931
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  8916157 ctcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 8916058  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            ||||||| ||| |||||||||||||  |||||||||||||||||||||||||||     
T  8916057 tatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgag 8915958  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||||||| || |||| ||||    
T  8915957 atcga-gaaaacccatacccatatccaa 8915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 228
Target Start/End: Original strand, 45256697 - 45256914
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||| | || |||||| ||||| |||||||||||| |||||||||| | |||||||    
T  45256697 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataacaagacatatca 45256796  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    |  |||| ||||||| |  ||| |||||            ||||||| ||| ||||| ||||||| | ||| ||||| |||||||||||||||||||||     
T  45256797 aaataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcgg 45256896  T
Q  211 ggaaaacccaaactcata 228  Q
    ||||||| || |||||||    
T  45256897 ggaaaactcatactcata 45256914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 10208651 - 10208423
Alignment:
Q  18 actcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggc 116  Q
    ||||| ||| |||||||| ||||  | ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  |    
T  10208651 actcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataac 10208552  T
Q  117 atatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||| ||| |||| ||||||| |  ||| |||||            ||||||| ||||||||||||||||  | |||||||||||||||||||||||| |    
T  10208551 atattaacataaagtaattttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaa 10208452  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     || | |||||||||| || |||||||||    
T  10208451 gattggggaaaacccatacccatacccaa 10208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 10920514 - 10920633
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||    
T  10920514 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 10920613  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  10920614 tatcaacataaagtaatttt 10920633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 44746322 - 44746102
Alignment:
Q  26 taacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataa-cacgacaattatcaagcaaaataacatggcatatcaac 124  Q
    ||||||||||||||| || | ||||| ||| | ||||||||||||| |||||||||||||| ||  ||||| |||||  ||||||||||||||||||||     
T  44746322 taacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataaccattacaatgatcaaataaaataacatggcatatcaag 44746223  T
Q  125 gtaaaataattttctgtattcgggacgggttcgag------------gtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgagg 212  Q
     |||| | |||||||  ||| |||||||||| |||            || ||||| ||||||| | ||||||||||||||  ||||||||||||||| ||    
T  44746222 ataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcgggg 44746123  T
Q  213 aaaacccaaactcatacccaa 233  Q
    ||||||||||  |||||||||    
T  44746122 aaaacccaaatccatacccaa 44746102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 24414352 - 24414125
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| |  |||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  24414352 ctcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 24414253  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||||            || ||| |||||||||||||  |||||||||||||||||||||||||||     
T  24414252 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgag 24414153  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||| | || |||||||||    
T  24414152 atcggggaaaaccgatacccatacccaa 24414125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 37472834 - 37472752
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| || |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  37472834 gggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaa 37472752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 45115427 - 45115638
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||| ||||||  | ||||||| ||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  45115427 ctcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 45115526  T
Q  118 tatcaacgtaaaataattttctgtattcggg------------acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||  ||||||| |  ||| |||            | ||||||| | | |||||||||||||  |||||||||| |||||||||||||||||    
T  45115527 tatcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaa 45115626  T
Q  206 atcgaggaaaac 217  Q
    ||||||||||||    
T  45115627 atcgaggaaaac 45115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 30846814 - 30847042
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  30846814 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 30846913  T
Q  118 tatcaacgtaaaataattttct-------------gtattcgggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    ||||||| |||| || |||| |             |  || || | ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  30846914 tatcaacataaagtagtttttttacaattgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 30847013  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
     |||| |||||||||| || |||||||||    
T  30847014 gatcggggaaaacccatacccatacccaa 30847042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 37472949 - 37472854
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacat 113  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||    
T  37472949 ctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacat 37472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 42798209 - 42798090
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  42798209 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 42798110  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  42798109 tatcaacataaagtaatttt 42798090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 18106301 - 18106191
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | ||||||| ||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||    ||||||| |    
T  18106301 acatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgtatcaacat 18106202  T
Q  127 aaaataatttt 137  Q
    |||||||||||    
T  18106201 aaaataatttt 18106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 9632255 - 9632478
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| ||||||||| ||  ||||||||||  ||    
T  9632255 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacataaca 9632354  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt------------cgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| || |||| |  ||| ||||||||||            || ||| | ||||||||||| | ||||||||||||||||||||||| ||     
T  9632355 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgag 9632454  T
Q  206 atcgaggaaaacccaaactcatac 229  Q
    |||| |||||||||| || |||||    
T  9632455 atcggggaaaacccatacccatac 9632478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 15546785 - 15546839
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccca 232  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  15546785 gttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgccca 15546839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 35248460 - 35248378
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||| ||| | | ||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||    
T  35248460 gggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaa 35248378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 36128318 - 36128216
Alignment:
Q  28 acatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatcaacgt 126  Q
    |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||||||||| |    
T  36128318 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 36128219  T
Q  127 aaa 129  Q
    |||    
T  36128218 aaa 36128216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 37309826 - 37309737
Alignment:
Q  143 ttcgggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| ||||| ||||| ||||| ||||||| | ||||||||||| ||| ||||||| ||| ||||| |||||||||||||||    
T  37309826 ttcgggacgggtttgaggtgggtacatatatcctcgttatc-gtcccatacccatgtattgaaattgagaaaaactcaaactcatacccaa 37309737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22900834 - 22900889
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccca 232  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  22900834 cgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccataccca 22900889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 37319816 - 37319862
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatca 70  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  37319816 tttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 24051699 - 24051617
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||||||||| ||||| |  |||||||||||||||| ||| |||| ||||||  |||| ||||||| |||||||||    
T  24051699 gggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaa 24051617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 10212446 - 10212499
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||||||| ||||| || |||||||| ||||||| ||||||||||||||||||||    
T  10212446 cgttacctgtcccgtaaccgtgtttggaaatcggggaaaacccaaactcatacc 10212499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 36128168 - 36128099
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||| |||||||| |||||||||||||||| || |||| ||||| | || || |||||||||    
T  36128168 gtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaa 36128099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 12341648 - 12341696
Alignment:
Q  185 gtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||| |||||||||||||| |||||||||| || |||||||||    
T  12341648 gtcccatacctgtgttttgaaatcggggaaaacccatacccatacccaa 12341696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 25210403 - 25210463
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||| ||||| |||||||||||||||||||||||||||| || ||| | |||||| ||||    
T  25210403 ggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaaacctaaac 25210463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 42798063 - 42798011
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttg 203  Q
    ||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||||    
T  42798063 gggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg 42798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 35510515 - 35510436
Alignment:
Q  154 ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| | ||||||||| ||| |||||||||   || | |||||||||||| | ||||||||||||||| |||||||    
T  35510515 ttcgaggtggatacctatatcctcattacccgtcttgtatctgtgttttgaaattggggaaaacccaaactcttacccaa 35510436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 40734632 - 40734577
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||| |||||||||||||  ||||||  ||||||||||| ||||||||||    
T  40734632 gttacccgtctcatacccgtgtttgaaaatcgctgaaaacccaaattcatacccaa 40734577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 26755766 - 26755836
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||| | |||||  ||||| |||||| | |||| ||||||| ||||||||||||||||||||||    
T  26755766 ggtacatatatccccgttaatcgtccgatacccatattttaaaatcgaagaaaacccaaactcatacccaa 26755836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 33175255 - 33175325
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| || |||||| ||| |||||||||||| ||||||  ||||||| || |||||| ||||    
T  33175255 ggtacctatatacacgctacccgacccgtacccgtgttttaaaatcggagaaaaccaaatctcatatccaa 33175325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 38342594 - 38342512
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| | ||||||||||||| || |||| |||| |||||| ||||||| ||||| |||| ||||    
T  38342594 gggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaacccatatccaa 38342512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 43371579 - 43371649
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||| ||||| | ||||||||||||| ||||||| |||| |||||| ||||||| |||||  ||||||||    
T  43371579 ggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaa 43371649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 3547180 - 3547260
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    ||||||| ||| ||||| |||||   ||||||||||||| ||||||| |||||||||||   ||||||||||  |||||||    
T  3547180 gggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaaacccaaatccataccc 3547260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 17598816 - 17598856
Alignment:
Q  61 ttaaatatcaaagatagtttttataacacgacaattatcaa 101  Q
    ||||||||||| ||| |||||||||||| ||||||||||||    
T  17598816 ttaaatatcaatgattgtttttataacatgacaattatcaa 17598856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 26755639 - 26755703
Alignment:
Q  59 ctttaaatatcaaagatagtt-tttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||| |||||| || |||| |||||| || |||||||||||| | ||||||||||||||||||    
T  26755639 ctttaactatcaatgaaagttctttatatcatgacaattatcaaaccaaataacatggcatatca 26755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 34214698 - 34214654
Alignment:
Q  185 gtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||| ||||||||||||||||| ||| ||||| |||||||||||    
T  34214698 gtcccgtacccgtgttttgaaattgagaaaaactcaaactcatac 34214654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 35409246 - 35409170
Alignment:
Q  147 ggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||| | ||| |||||||||||   |||||||  |||| |||  |||||||||||||| |||||||||||||    
T  35409246 ggacgggtttggggtgggtacctatatctacgttacctttcccgtactagtgttttgaaatcggggaaaacccaaac 35409170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 197552 - 197410
Alignment:
Q  13 aaaatactcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataaca 112  Q
    ||||| |||| ||||| |||||||||||||||||||||||||| | ||||||||||||| | |||||||||||||| |  ||||||||| ||||||||||    
T  197552 aaaatgctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagtttttataacaaggtaattatcaaacaaaataaca 197453  T
Q  113 tggcatatcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||||||||| |||| |||||||||| ||||||||||||||    
T  197452 tggcatatcaacataaagtaattttctgcattcgggacgggtt 197410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 3573093 - 3573229
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||||||||||||||||||||| | |||| |||||||| | ||||||||||||||||||||||||||| || ||||||||| |||    
T  3573093 ctcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagtttttataacacgacaattatcaaacagaataacatgacat 3573192  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||| ||||||||||||||  |||||||| |||||    
T  3573193 atcaacataaaataattttctacattcgggaggggtt 3573229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 18206891 - 18207113
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgac-aattatcaagcaaaataacatggcatatca 122  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||    |||||||||||||||| | |||||| || ||||||||||||||||||||    
T  18206891 tttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagtttttataacacggcaaattattaaacaaaataacatggcatatca 18206990  T
Q  123 acgta-aaataattttctgtattcgggacgggttcga-----------ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || || || |||||||||  |||||||||||||| ||           ||| |||||||||||||  |||||| ||||||||| || |||||||||||||    
T  18206991 acatagaagtaattttctacattcgggacgggtttgaatatgggttcgggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcga 18207090  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||| |||||    
T  18207091 ggaaaacccaaactcatgcccaa 18207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 2985016 - 2985143
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||    
T  2985016 ctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaataaaataacatgacat 2985115  T
Q  119 atcaacgtaaaataattttctgtattcg 146  Q
    |||||  |||||||||||||| ||||||    
T  2985116 atcaatataaaataattttctatattcg 2985143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 27088566 - 27088436
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||||||||    
T  27088566 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacataacaattatcaaacaaaataacat-acatatcaa 27088468  T
Q  124 cgtaaaataattttctgtattcgggacgggtt 155  Q
    | ||||||||||||||  ||||| ||||||||    
T  27088467 cataaaataattttctacattcgagacgggtt 27088436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 35194204 - 35194014
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||||||| | |||||||||||||||  |||||||||| ||||||||||| |||||| ||    
T  35194204 tttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagtttttataacacagcaattatcaaacaaaataacatagcatattaa 35194105  T
Q  124 cgtaaaataattttctgtattcgggacgggttcga------------ggtaggtacctatatactcgttacccgtcccatacccgtgtttt 202  Q
    | |||| |||||||||  |||||||||||||| ||            ||| ||||||||||||| ||||||||||||||||||||||||||    
T  35194104 cataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttt 35194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 20973706 - 20973490
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||| |||| |||||| || ||||||||||| | ||||| ||||||| | |||||||||| |||| |||||||||||| ||||||| |||| ||    
T  20973706 ctcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgacaattatcaaacaaaataccatgaca 20973607  T
Q  118 tatcaacgtaaaataattttctgtattcggg-acgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaa 216  Q
    ||||||| |||| ||||||| |  ||| ||| | ||||||| ||| ||||||||||||| |||||||| ||||||||||||||||  |||||| ||||||    
T  20973606 tatcaacataaagtaattttttacatttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaa 20973507  T
Q  217 cccaaactcatacccaa 233  Q
    |||| || |||| ||||    
T  20973506 cccatacccataaccaa 20973490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 30115352 - 30115488
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||| ||| |||||||||| | |||||||||| || | | |||||||||||||| |||||||||| ||||||||||| ||||    
T  30115352 ctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggtttttataacacggcaattatcaaacaaaataacatagcat 30115451  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    |||||| |||||||||||| || ||||||||||||||    
T  30115452 atcaacataaaataattttatgcattcgggacgggtt 30115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 4582987 - 4583214
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||| ||||| || ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||| ||    
T  4582987 ctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 4583086  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||| | ||| || |||||||||| |||||||||||||||||||||||||||||    
T  4583087 tatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaa 4583186  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||| ||||    
T  4583187 atcggggaaaacccatacccatatccaa 4583214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 12447255 - 12447466
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||| |||||||||||  || | ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  12447255 tttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaaataacatgacatattaa 12447354  T
Q  124 cgtaaaataattttctgtattcgggacg------------ggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| || |||||| |||| ||||||            |||||| ||| ||||||||||||| | ||||| |||||||||| |||||||  |||| ||    
T  12447355 cataaagtagttttctatatttgggacgggtttgggtataggttcggggtgggtacctatatacccattacctgtcccatacctgtgttttacaatcaag 12447454  T
Q  212 gaaaacccaaac 223  Q
    ||||||||||||    
T  12447455 gaaaacccaaac 12447466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 30996465 - 30996691
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||| ||||||| || ||||||| ||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||||||    
T  30996465 ctcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacatggca 30996563  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgg------------gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||||            ||||| ||| ||||||||||||| ||||||| ||||||||| |||||||| ||    
T  30996564 tatcaacttaaagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaa 30996663  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    ||||  ||||||||| ||||||||||||    
T  30996664 atcggagaaaacccatactcatacccaa 30996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 33862398 - 33862270
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||||||| || ||||||||||||| |  ||||||||||||   ||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  33862398 tttaacatttgttagccc-attgatttagttggtcatttaaatatcaatcgtagtttttacaacatgacaattatcaaacaaaataacatggcatatcaa 33862300  T
Q  124 cgtaaaataattttctgtattcgggacggg 153  Q
    | ||||||| ||||||| ||||||||||||    
T  33862299 cataaaatagttttctgcattcgggacggg 33862270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 38006684 - 38006473
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||| |||||||||| ||||||||||||| | ||||||||||||| | | |||||||||| ||||| |||||||| |||||||||||| ||||| ||    
T  38006684 tttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggtttttataatacgactattatcaaacaaaataacatgacatattaa 38006585  T
Q  124 cgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgag 211  Q
    | |||| ||||||||   |||||||||            ||||||| ||| ||||||||||||   ||||| |||||||||||||| ||||||||| | |    
T  38006584 cataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattggg 38006485  T
Q  212 gaaaacccaaac 223  Q
    ||||||||||||    
T  38006484 gaaaacccaaac 38006473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 42717847 - 42717719
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatc-aagcaaaataacatggcatatca 122  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| |||    
T  42717847 tttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagtttttataacacgacaattatcaaaacaaaatatcatggcatgtca 42717748  T
Q  123 acgtaaaataattttctgtattcgggacgg 152  Q
    || | || |||||||||| |||| ||||||    
T  42717747 acat-aagtaattttctgcattcaggacgg 42717719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 2412946 - 2412814
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||| |||||||||||||||| ||||||||| | |||||||||||||   |||||||||| |||| ||||||||||| |||||||||||| |||    
T  2412946 ctcactttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagtttttatgacacaacaattatcaaacaaaataacatgacat 2412847  T
Q  119 atcaacgtaaaataattttctgtattcgggacg 151  Q
    |||||  |||| |||||||||| || |||||||    
T  2412846 atcaatataaagtaattttctgcatacgggacg 2412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 4920694 - 4920921
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  |||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  4920694 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 4920793  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||||| ||| | ||||||||||| ||||||||||||||||||||||||||||     
T  4920794 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgag 4920893  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||| ||||    
T  4920894 atcggggaaaacccatacccataaccaa 4920921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 35311691 - 35311893
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  35311691 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacat-aca 35311789  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            |||||||  || ||||||||||||   ||||||||||||||||||||||||||||    
T  35311790 tatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaa 35311889  T
Q  206 atcg 209  Q
    ||||    
T  35311890 atcg 35311893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 40517674 - 40517901
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  40517674 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 40517773  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |   || |||||            ||||||| ||| |||| |||||||| |||||||| ||||||||||||||||||      
T  40517774 tatcaacataaaataattttttacctttgggacgggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttggg 40517873  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||||||| || |||||||||    
T  40517874 atcggggaaaacccatacccatacccaa 40517901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 42987700 - 42987473
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||  ||    
T  42987700 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 42987601  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||||||||||| |  ||| |||||            ||||||| | | ||||||||||||  |||||| |||||||||||||||||||||     
T  42987600 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgag 42987501  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| |||||| ||| || | |||||||    
T  42987500 atcggggaaaatccatacccgtacccaa 42987473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 3564948 - 3564830
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||  ||    
T  3564948 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacat-aca 3564850  T
Q  118 tatcaacgtaaaataatttt 137  Q
    ||||||| |||| |||||||    
T  3564849 tatcaacataaagtaatttt 3564830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 17853507 - 17853287
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||  |||||||    
T  17853507 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacat-acatatca 17853409  T
Q  123 acgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||||            |||||||  || |||| |||||||  |||||||||||||||||||||| ||||||||||     
T  17853408 acataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtg-tttgaaatcgg 17853310  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
    |||||||||| |  |||||||||    
T  17853309 ggaaaacccatatccatacccaa 17853287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 1218625 - 1218759
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||||||| || ||||||||||| | ||||||||||||| | |||||||| ||||| |||||||||||| |||||||||||  ||     
T  1218625 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataacat-acaa 1218723  T
Q  119 atcaacgtaaaataattttctgtattcgggacgggt 154  Q
    |||||| |||| ||||||| |  ||| |||||||||    
T  1218724 atcaacataaagtaattttttacatttgggacgggt 1218759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 6156139 - 6155914
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||| ||| | ||||||||||||| |||| |||||| || || |||||||||||| |||||||||||| ||    
T  6156139 ctcactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattaccatgacaattatcaaacaaaataacatgtca 6156040  T
Q  118 tatcaacgtaaaataatttt------------ctgtattcgggacgggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||| ||| |||| |||||||            | || || || | ||||||| ||| ||||| ||||||  | ||||| |||| ||||||||||||||||    
T  6156039 tataaacataaagtaattttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatata--ccttacctgtcctatacccgtgttttgaa 6155942  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||||||||||| |||||||||    
T  6155941 atcggggaaaacccaaacacatacccaa 6155914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 22695122 - 22694985
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | |||| |||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  22695122 ctcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacattaca 22695023  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    ||||||| |||||||||||| |  ||| ||||||||||    
T  22695022 tatcaacataaaataattttttacatttgggacgggtt 22694985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 28045528 - 28045660
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta--taacacgacaattatcaagcaaaataacatggcatatc 121  Q
    |||||||||||||||||  | ||||||||||| | ||||||||||||| |||||||||||  |||||  |||||||| || |||||||||||| ||||||    
T  28045528 tttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacataacaattataaaacaaaataacatgacatatc 28045627  T
Q  122 aacgtaaaataattttctgtattcgggacgggt 154  Q
    ||| |||| ||||||| |  ||| |||||||||    
T  28045628 aacataaagtaattttttacatttgggacgggt 28045660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 29246172 - 29246053
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||||||||||||||||| || ||||||| ||| ||| ||||||||||| | |||| ||||| ||||  ||||||||||| |||||||||||| ||    
T  29246172 ctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggtagtgtttattaacataacaattatcaaacaaaataacatgaca 29246073  T
Q  118 tatcaacgtaaaataatttt 137  Q
    || |||| ||||||||||||    
T  29246072 taccaacataaaataatttt 29246053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 5908909 - 5908682
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | ||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||  ||    
T  5908909 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 5908810  T
Q  118 tatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaa 205  Q
    ||||||| |||| ||||||| |  ||| |||||            ||||| | |||  |||| ||||||| ||||||||||||||||||||||||| ||     
T  5908809 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgag 5908710  T
Q  206 atcgaggaaaacccaaactcatacccaa 233  Q
    |||| ||||||| || || |||||||||    
T  5908709 atcggggaaaactcatacccatacccaa 5908682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 15890080 - 15890301
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||||||||||||||  | | ||||| ||| | ||| ||||||||| | ||||||| || || | ||||||||||||  ||||||||||| |||||||    
T  15890080 tttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatgacaattatcaaataaaataacatgacatatca 15890179  T
Q  123 acgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcga 210  Q
    || |||| ||||||| |  ||| |||||||||            ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  15890180 acataaagtaattttttacatttgggacgggtatgggtatgggttcg-ggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcgg 15890278  T
Q  211 ggaaaacccaaactcatacccaa 233  Q
     ||||||||| || |||| ||||    
T  15890279 agaaaacccatacacatagccaa 15890301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 13402223 - 13402088
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggca 117  Q
    |||| |||||||||||||||||  | ||||||||||| | |||||||||||||   ||||||||| ||||| |||||||||||| |||||||||||  ||    
T  13402223 ctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaaaataacat-aca 13402125  T
Q  118 tatcaacgtaaaataattttctgtattcgggacgggt 154  Q
    ||||||| |||| ||||||| |  ||| |||||||||    
T  13402124 tatcaacataaagtaattttttacatttgggacgggt 13402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 12834796 - 12834568
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatgg-c 116  Q
    |||| |||||||||||||||||  |  |||||| ||| |  || ||||||||| | |||||||||| |||| |||||||||||| ||||||||||| | |    
T  12834796 ctcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatagac 12834697  T
Q  117 atatcaacgtaaaataattttctgtattcgggacgggt------------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttga 204  Q
    |||||||| |||| ||||||| |  ||| |||||||||            ||| |||||||||||||||||  ||||||||||||||| || ||||||||    
T  12834696 atatcaacataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttga 12834597  T
Q  205 aatcgaggaaaacccaaactcatacccaa 233  Q
    ||| |  ||||||||| || |||||||||    
T  12834596 aattggagaaaacccatacccatacccaa 12834568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 28569097 - 28569015
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||||||||| | ||||||||||||| ||||||  ||||||||||| |||||| ||||||||||||||||    
T  28569097 gggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaa 28569015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 8453592 - 8453474
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| ||||||||||||| |||||| ||||||||||  | ||||||||||||| | || ||||||||||| ||||||||| || |||||||||  | |||    
T  8453592 ctcattttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaatttttataacatgacaattattaaacaaaataac--gacat 8453495  T
Q  119 atcaacgtaaaataattttct 139  Q
    || ||| |||| |||||||||    
T  8453494 attaacataaactaattttct 8453474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 233
Target Start/End: Complemental strand, 12866729 - 12866545
Alignment:
Q  63 aaatatcaaagatagtttttat-aacacgacaattatcaagcaaaataacatgg-catatcaacgtaaaataattttctgtattcgggacgggt------ 154  Q
    ||||||||| | |||||||||| |||| |||||||||||| ||||||||||| | ||||||||| |||| ||||||| |  ||| |||||||||          
T  12866729 aaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatagacatatcaacataaagtaattttttacatttgggacgggtatgggt 12866630  T
Q  155 ------tcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
          ||| ||| |||||||||||||  |||||||||||||||||| |||||||||||||  |||||| || || |||||||||    
T  12866629 atgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaa 12866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 38972935 - 38973014
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||||||| ||| ||||||||||| | |||||||  |||||||||| ||||||||||||| | ||||||||||||||||||    
T  38972935 gggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacc 38973014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 33728065 - 33727995
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| || |||| ||||    
T  33728065 ggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaa 33727995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 6092728 - 6092620
Alignment:
Q  30 atttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatcaacgtaa 128  Q
    |||||||||||  | ||||||||||| | ||||||||||||| | ||||||||| |||||   |||||||||| |||||||||||  ||||||||| |||    
T  6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
Q  129 aataatttt 137  Q
    | |||||||    
T  6092628 agtaatttt 6092620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 33420496 - 33420437
Alignment:
Q  73 gatagtttttataacacgacaattatcaagcaaaataacatggcatatcaacgtaaaata 132  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||  |||||||    
T  33420496 gatagtttttataacacgacaattatcaaataaaataacatgacatatcaatataaaata 33420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 39422394 - 39422441
Alignment:
Q  186 tcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  39422394 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaa 39422441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 10127116 - 10127169
Alignment:
Q  180 tacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||||||||||||| |||| |||||||||| || |||||||||    
T  10127116 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaa 10127169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 6810171 - 6810247
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcat 227  Q
    ||||||| |||  |||| ||||| |||||||||||| || |||||||||| | |||||| |||||||||||||||||    
T  6810171 gggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactcat 6810247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 27900477 - 27900405
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||| | ||||||||||| | | ||||||||||||||||| ||||||||||||| | ||||| |||||    
T  27900477 gggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaac 27900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 10822602 - 10822531
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaa 222  Q
    ||||||| ||| ||||| ||||  | |||||||||||| ||||||||||||||||||||  |||||||||||    
T  10822602 gggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaacccaaa 10822531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 12712633 - 12712558
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    ||||||||||| ||||| |||||   ||||| ||||||| ||||||| |||||||||||  |||||||||||||||    
T  12712633 gggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactca 12712558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 12773897 - 12773822
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    ||||||||||| ||||| |||||   ||||| ||||||| ||||||| |||||||||||  |||||||||||||||    
T  12773897 gggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaactca 12773822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 6369569 - 6369683
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||| || ||||||||||| |  |||||| ||||| | ||||||| | ||||| || ||||||||| |||||||||| | |  ||||    
T  6369569 tttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataattatcaaacaaaataacacgacgcatca 6369668  T
Q  123 acgtaaaataatttt 137  Q
    || |||| |||||||    
T  6369669 acataaagtaatttt 6369683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 23045067 - 23044985
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| |||||   |||||||| |||| ||||||| ||||||||||| |||||||| |||| |||||||||    
T  23045067 gggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaa 23044985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 27302948 - 27302837
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    ||||||||||||||||  || ||||||||||| | ||||||||||||| | ||  |  ||  ||| |||||||||||| |||||||||||| ||||| ||    
T  27302948 tttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtacgtagta--acatgacaattatcaaacaaaataacatgacatattaa 27302851  T
Q  124 cgtaaaataatttt 137  Q
    | |||| |||||||    
T  27302850 cataaagtaatttt 27302837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 29246015 - 29245945
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||||  ||||  ||||||||||||||||||||||||||  |||||| || || |||||||||    
T  29246015 ggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaa 29245945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 43523801 - 43523843
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  43523801 tacccgtattttgaaatcggggaaaacccaaactcatacccaa 43523843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 3573246 - 3573291
Alignment:
Q  181 acccgtcccatacccgtgttttgaaatcgaggaaaacccaaactca 226  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||    
T  3573246 acccatcctatacccgtgtcttgaaatcgaggaaaacccaaactca 3573291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 12457557 - 12457602
Alignment:
Q  178 gttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||    
T  12457557 gttacctgtcccatacccgtattttgaaatcgaggaaaccccaaac 12457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 27088413 - 27088365
Alignment:
Q  185 gtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||    
T  27088413 gtcccatacccgtgtcttaaaatcgaggaaaacctaaacacatacccaa 27088365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 2985173 - 2985232
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||||||||| |||||||||||||| |||| ||| |||||||||  |||||| |||||    
T  2985173 gtacctatatacccgttacccgtcccaaacccatgtcttgaaatcggagaaaactcaaac 2985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 8453436 - 8453378
Alignment:
Q  164 gtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    |||||||||||   ||||||| |||||||||||||||||||||||| ||||| |||||||    
T  8453436 gtacctatatatctgttacccatcccatacccgtgttttgaaatcg-ggaaagcccaaac 8453378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 20634055 - 20634130
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||| |||||| |||||| |||||| || |||| ||||| || |||||||||||| | |||||||||| |||||||    
T  20634055 atttggttgttcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatca 20634130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 20650169 - 20650244
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||| |||||| |||||| |||||| || |||| ||||| || |||||||||||| | |||||||||| |||||||    
T  20650169 atttggttgttcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatca 20650244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 28045676 - 28045747
Alignment:
Q  159 ggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacc 230  Q
    ||| ||||||||||||| ||||||||||||||||  ||||||||||| | | | |||||||| || ||||||    
T  28045676 ggtgggtacctatatacccgttacccgtcccatattcgtgttttgaattagggaaaaacccatacccatacc 28045747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 2681257 - 2681311
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||| |||| |||| || ||||||||||| ||||||||||||||||| |||||    
T  2681257 ttacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaa 2681311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 13402068 - 13401998
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| |||| |||||||||| ||||||||||||||  |||||| | ||||| || || |||||||||    
T  13402068 ggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaa 13401998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 18116553 - 18116511
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| |||||||||||  ||||||||||||||||||||||    
T  18116553 tacccgtattttgaaatcggagaaaacccaaactcatacccaa 18116511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 27302808 - 27302746
Alignment:
Q  154 ttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaa 216  Q
    |||| ||| |||||||||||| | |||| ||||| |||| |||||||||||||||| ||||||    
T  27302808 ttcggggtgggtacctatatatttgttatccgtctcatatccgtgttttgaaatcggggaaaa 27302746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 34259140 - 34259210
Alignment:
Q  52 gttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||||| |||||| |||||| || |||| ||||| || |||||||||||| | |||||||||| |||||||    
T  34259140 gttgttcctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatca 34259210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 40187707 - 40187657
Alignment:
Q  177 cgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcat 227  Q
    ||||||||||| |  |||||||||||||||| | |||||||||||||||||    
T  40187707 cgttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcat 40187657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 15564576 - 15564637
Alignment:
Q  90 gacaattatcaagcaaaataacatggcatatcaacgtaaaataattttctgtattcgggacg 151  Q
    ||||||| ||||  ||||||||||| |||||||| ||||| |||||||||  ||||||||||    
T  15564576 gacaattttcaaaaaaaataacatgacatatcaatgtaaagtaattttctacattcgggacg 15564637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 29664986 - 29665060
Alignment:
Q  153 gttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    |||||| || ||||||||||| | |||||||| ||   ||||||||||||||||||  ||| |||||||||||||||    
T  29664986 gttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatc--ggagaacccaaactcatac 29665060  T

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Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 34259280 - 34259333
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaa 216  Q
    ||||| ||||| ||||||||||||||  ||||| | ||||||||||||||||||    
T  34259280 ggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaa 34259333  T

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Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 41006502 - 41006551
Alignment:
Q  38 gaccgattgatttagttgtttctttaaatatcaaagatagtttttataac 87  Q
    |||||| |||||| ||||||| ||||||||||||  ||||||||||||||    
T  41006502 gaccgaatgattttgttgtttatttaaatatcaacaatagtttttataac 41006551  T

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Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 35584171 - 35584207
Alignment:
Q  193 cccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    |||||||||||||| || |||||||||||||||||||    
T  35584171 cccgtgttttgaaaacggggaaaacccaaactcatac 35584207  T

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Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 90463 - 90679
Alignment:
Q  16 atactcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatgg 115  Q
    ||||||| ||||| |||||||||||||||||||||| ||| | ||||||||||||| | | ||||| |||||||  ||||||| || |||||||||||||    
T  90463 atactcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttgttttaataacacatcaattattaaacaaaataacatgg 90562  T
Q  116 catatcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttg 203  Q
    ||||||||| ||||||||||||||| |||| ||||            ||||||| ||  |||||| |||||| ||||| ||||| |||||||||||||||    
T  90563 catatcaacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttg 90662  T
Q  204 aaatcgaggaaaaccca 220  Q
    |||||| ||||||||||    
T  90663 aaatcggggaaaaccca 90679  T

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Target: scaffold0294 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 14644 - 14870
Alignment:
Q  19 ctcaatttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcat 118  Q
    |||| |||||||||||||| ||||||||||||||||| | ||||||||||||| | ||||||||| ||||| | ||||||||| |||||||| ||  |||    
T  14644 ctcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagtttttacaacacaataattatcaaacaaaataatatatcat 14743  T
Q  119 atcaacgtaaaataattttctgtattcgggac------------gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaa 206  Q
    |||||| | ||||||||||||  ||| |||||            | |||| |||| ||||||||||||| | ||| ||||||||| |  |||||||||||    
T  14744 atcaacattaaataattttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgttttgaaa 14843  T
Q  207 tcgaggaaaacccaaactcatacccaa 233  Q
    |||  ||||||||||||||||||||||    
T  14844 tcggagaaaacccaaactcatacccaa 14870  T

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Target: scaffold0027 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 6280 - 6411
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatcaa 123  Q
    |||||||||||||||| ||||||||||||||| | |||||||| |||| | || |||||||| |||||||| |||||| |||||||||||||||||||||    
T  6280 tttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaatttttatagcacgacaactatcaaacaaaataacatggcatatcaa 6379  T
Q  124 cgtaaaataattttctgtattcgggacgggtt 155  Q
    | |||| ||| |||||| ||| | ||||||||    
T  6380 cataaagtaactttctgcatttgagacgggtt 6411  T

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Target: scaffold0135 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 36030 - 36159
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgttt--ctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatc 121  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||     
T  36030 tttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaataacatgacatatt 36129  T
Q  122 aacgtaaaataattttctgtattcgggacgggtt 155  Q
    || |     |||||||||| ||||||||||||||    
T  36130 aatg----gtaattttctgcattcgggacgggtt 36159  T

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Target: scaffold0189 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 4130 - 4236
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagttttta-taacacgacaattatcaagcaaaataacatggcatatca 122  Q
    ||||||||||||||||  || ||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||| |||||||    
T  4130 tttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacatatca 4229  T
Q  123 acgtaaa 129  Q
    || ||||    
T  4230 acataaa 4236  T

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Target: scaffold0189; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 4290 - 4339
Alignment:
Q  170 atatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccc 219  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  4290 atatactcgttaccagtctcatacccgtgttttgaaatcgagaaaaaccc 4339  T

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Target: scaffold0097 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 33457 - 33592
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgacaattatc-aagca---aaataacatggcata 119  Q
    ||||| |||||||| ||||| ||||||| ||| ||||||||||||||| | ||||||||||||||||| ||||||| || ||   |||||||||||||||    
T  33457 tttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagtttttataacacgaaaattatcaaatcaaataaataacatggcata 33556  T
Q  120 tcaacgtaaaataattttctgtattcgggacgggtt 155  Q
    ||| | |||| || ||||||| ||| | ||||||||    
T  33557 tcatcataaagtagttttctgcatttgtgacgggtt 33592  T

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Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 14359 - 14290
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttgtttctttaaatatcaaagatagtttttataacacgaca 93  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||| ||||    
T  14359 tttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagtttttataacatgaca 14290  T

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Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 14230 - 14177
Alignment:
Q  179 ttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  14230 ttacccgttccatacccgtgtttt-aaatcggggaaaactcaaactcatacccaa 14177  T

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Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 2982 - 3064
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| |  |||| ||||||  ||||||| ||||||||||| |||||||||||||||||||||||    
T  2982 gggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaa 3064  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 14900 - 14940
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcataccc 231  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  14900 tacccgtgttttgaaatcggggaaaacccaaactcataccc 14940  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 211377 - 211459
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    ||||||| ||| ||||| ||||| |  |||||||||| | ||||||| |||||||||||  |||||||||||| |||||||||    
T  211377 gggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaa 211459  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 56111 - 56036
Alignment:
Q  47 atttagttgtttctttaaatatcaaagatagtttttataacacgacaattatcaagcaaaataacatggcatatca 122  Q
    |||| |||| |||||||  |||||| || |||||||||| || |||||||||||| | ||||||||||| ||||||    
T  56111 atttggttgcttctttacctatcaatgaaagtttttatatcaggacaattatcaaaccaaataacatggaatatca 56036  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 107437 - 107394
Alignment:
Q  180 tacccgtcccatacccgtgttttgaaatcgaggaaaacccaaac 223  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||    
T  107437 tacccgtcccatacctgtgttttgaaatcgagaaaaactcaaac 107394  T

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Target: scaffold1118 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 661 - 703
Alignment:
Q  191 tacccgtgttttgaaatcgaggaaaacccaaactcatacccaa 233  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  661 tacccgtgttttaaaatcgaggaaaattcaaactcatacccaa 703  T

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Target: scaffold0244 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 4656 - 4579
Alignment:
Q  151 gggttcgaggtaggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||||| ||| |||| |||||| |  |||||| ||||||||||||| ||||||||| | |||||| ||||||||||||    
T  4656 gggttcgtggtgggtagctatatccctgttacctgtcccatacccgtattttgaaattggggaaaa-ccaaactcatac 4579  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 70120 - 70186
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaacccaaactcatac 229  Q
    ||||| ||||| ||||||||||||||| ||||||| || |||||||  | |||| ||||||||||||    
T  70120 ggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaaatccaaactcatac 70186  T

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Target: scaffold0519 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 10322 - 10378
Alignment:
Q  163 ggtacctatatactcgttacccgtcccatacccgtgttttgaaatcgaggaaaaccca 220  Q
    |||||||||||||  |||| ||||||||||||||||||| |||| || ||||||||||    
T  10322 ggtacctatatacctgttatccgtcccatacccgtgtttggaaagcg-ggaaaaccca 10378  T

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Target: scaffold0795 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 267 - 303
Alignment:
Q  181 acccgtcccatacccgtgttttgaaatcgaggaaaac 217  Q
    |||||||||||||||||||||||| || |||||||||    
T  267 acccgtcccatacccgtgttttgagattgaggaaaac 303  T

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