View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5790_low_21 (Length: 208)
Name: NF5790_low_21
Description: NF5790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5790_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37273861 - 37273677
Alignment:
| Q |
1 |
tacgtacaatgttatgttagattttatgtgagagtaatctaagacaatcccaaacaggggggacttaactcattaaaacttgggatccaatagataactc |
100 |
Q |
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| T |
37273861 |
tacgtacaatgttatgttagattttatgtgagagtaatctaagacaatcccaaacaggggggacttaactcattaaaacttgggatccaatagataactc |
37273762 |
T |
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| Q |
101 |
aattagagagaaaatttgaaagatgatgcttgtggtacgggaactcaactaagcactctctctttctctttttgtcattcccatgac |
187 |
Q |
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| T |
37273761 |
aattagagagaaaatttgaaagatgatgcttgtggtacgggaactcaactaagcact--ctctttctctttttgtcattcccatgac |
37273677 |
T |
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