View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5791-Insertion-3 (Length: 215)
Name: NF5791-Insertion-3
Description: NF5791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5791-Insertion-3 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 39992938 - 39993120
Alignment:
| Q |
8 |
cattcaatttttcagaaagagaagcttttatgtgaaaacaatggatttggttttgaacttctaaattcaaacggccactcctttcaaattcgaagctatc |
107 |
Q |
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| T |
39992938 |
cattcaatttttcagaaagagaagcttttatgtgaaaacaatggatttggttttgaacttctaaattcaaacggccactcctttcaaattcgaagctatc |
39993037 |
T |
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| Q |
108 |
tttctctctcatttctataaagggcttttgctgtttttgacccttgtgtttacatgaattaccaatactgccactccactctc |
190 |
Q |
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| T |
39993038 |
tttctctctcatttctataaagggcttttgctgtttttgacctctgtgtttacatgaattaccaatactgccactccactctc |
39993120 |
T |
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