View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5792-Insertion-3 (Length: 649)

Name: NF5792-Insertion-3
Description: NF5792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5792-Insertion-3
NF5792-Insertion-3
[»] scaffold0003 (1 HSPs)
scaffold0003 (138-649)||(291834-292349)
[»] chr4 (49 HSPs)
chr4 (140-649)||(45961509-45961998)
chr4 (48-109)||(45962173-45962233)
chr4 (9-49)||(11394946-11394986)
chr4 (9-49)||(11404673-11404713)
chr4 (9-49)||(20639659-20639699)
chr4 (9-49)||(35532086-35532126)
chr4 (9-49)||(38755909-38755949)
chr4 (9-49)||(40553938-40553978)
chr4 (9-49)||(44363131-44363171)
chr4 (9-49)||(6430627-6430667)
chr4 (9-49)||(23501883-23501923)
chr4 (9-49)||(30352581-30352621)
chr4 (9-49)||(32484327-32484367)
chr4 (9-49)||(33836488-33836528)
chr4 (10-49)||(8473621-8473660)
chr4 (17-54)||(20225178-20225215)
chr4 (8-49)||(35567263-35567304)
chr4 (9-49)||(5648352-5648392)
chr4 (9-49)||(11054149-11054189)
chr4 (17-49)||(16408602-16408634)
chr4 (9-49)||(20225076-20225116)
chr4 (9-49)||(25388270-25388310)
chr4 (17-49)||(25629151-25629183)
chr4 (9-49)||(30639473-30639513)
chr4 (9-49)||(30690177-30690217)
chr4 (9-49)||(36816385-36816425)
chr4 (9-49)||(38786703-38786743)
chr4 (9-49)||(40915922-40915962)
chr4 (9-49)||(44718661-44718701)
chr4 (9-49)||(54175159-54175199)
chr4 (17-49)||(56323002-56323034)
chr4 (13-48)||(17315336-17315371)
chr4 (9-48)||(29207900-29207939)
chr4 (8-49)||(7909281-7909323)
chr4 (19-49)||(13256400-13256430)
chr4 (17-47)||(21647068-21647098)
chr4 (9-39)||(54730346-54730376)
chr4 (8-37)||(20908649-20908678)
chr4 (8-45)||(21489181-21489218)
chr4 (9-38)||(37038135-37038164)
chr4 (9-46)||(39077800-39077837)
chr4 (13-49)||(12666858-12666894)
chr4 (9-49)||(14983928-14983968)
chr4 (9-49)||(16911658-16911698)
chr4 (17-49)||(19028013-19028045)
chr4 (13-49)||(19425923-19425959)
chr4 (9-49)||(50555657-50555697)
chr4 (9-49)||(51865039-51865079)
chr4 (13-49)||(55766467-55766503)
[»] chr3 (41 HSPs)
chr3 (8-49)||(40390356-40390397)
chr3 (9-49)||(516528-516568)
chr3 (9-49)||(4495677-4495717)
chr3 (9-49)||(10484617-10484657)
chr3 (9-49)||(13628791-13628831)
chr3 (9-49)||(40272813-40272853)
chr3 (9-49)||(47624215-47624255)
chr3 (9-49)||(54032572-54032612)
chr3 (9-49)||(54484807-54484847)
chr3 (8-49)||(14266373-14266414)
chr3 (13-49)||(5173720-5173756)
chr3 (9-49)||(52926220-52926260)
chr3 (11-49)||(23871484-23871522)
chr3 (11-49)||(24851302-24851340)
chr3 (11-49)||(25517171-25517209)
chr3 (9-49)||(1217204-1217244)
chr3 (9-49)||(10795424-10795464)
chr3 (17-49)||(13730603-13730635)
chr3 (13-49)||(22609885-22609921)
chr3 (13-49)||(26869826-26869862)
chr3 (9-49)||(29366721-29366761)
chr3 (9-49)||(30452911-30452951)
chr3 (9-49)||(31592963-31593003)
chr3 (17-49)||(39203638-39203670)
chr3 (9-49)||(43956473-43956513)
chr3 (9-49)||(45786215-45786255)
chr3 (17-48)||(353351-353382)
chr3 (9-40)||(45948848-45948879)
chr3 (9-55)||(31831302-31831348)
chr3 (13-46)||(7943110-7943143)
chr3 (9-49)||(46421035-46421076)
chr3 (20-49)||(49013474-49013503)
chr3 (12-49)||(53996566-53996603)
chr3 (8-40)||(829452-829484)
chr3 (9-49)||(6242286-6242326)
chr3 (9-48)||(8247688-8247728)
chr3 (9-49)||(12914036-12914076)
chr3 (17-49)||(14987083-14987115)
chr3 (9-49)||(15797336-15797376)
chr3 (9-49)||(22122918-22122958)
chr3 (9-49)||(34771365-34771405)
[»] scaffold0057 (2 HSPs)
scaffold0057 (9-49)||(46925-46965)
scaffold0057 (8-49)||(24773-24814)
[»] chr8 (38 HSPs)
chr8 (9-49)||(12625984-12626024)
chr8 (9-49)||(27468093-27468133)
chr8 (9-49)||(35261773-35261813)
chr8 (9-49)||(39460995-39461035)
chr8 (9-46)||(18164764-18164801)
chr8 (8-49)||(27508003-27508044)
chr8 (13-49)||(10857927-10857963)
chr8 (9-49)||(28817627-28817667)
chr8 (9-45)||(29521690-29521726)
chr8 (9-49)||(44530243-44530283)
chr8 (6-49)||(31457263-31457306)
chr8 (8-49)||(17823669-17823710)
chr8 (8-49)||(33867045-33867086)
chr8 (17-49)||(6760926-6760958)
chr8 (9-49)||(13160795-13160835)
chr8 (9-49)||(16013550-16013590)
chr8 (17-49)||(20870027-20870059)
chr8 (9-49)||(26102611-26102651)
chr8 (9-49)||(28407497-28407537)
chr8 (9-49)||(30454098-30454138)
chr8 (9-49)||(30962772-30962812)
chr8 (9-49)||(36720890-36720930)
chr8 (13-49)||(45071362-45071398)
chr8 (9-44)||(20284075-20284110)
chr8 (9-44)||(21070703-21070738)
chr8 (18-49)||(23000229-23000260)
chr8 (7-49)||(40604907-40604949)
chr8 (8-49)||(25250617-25250658)
chr8 (16-49)||(35107312-35107345)
chr8 (17-49)||(7136528-7136560)
chr8 (9-41)||(8483947-8483979)
chr8 (9-49)||(8897765-8897805)
chr8 (9-49)||(12670251-12670291)
chr8 (17-49)||(16225123-16225155)
chr8 (9-49)||(23286338-23286378)
chr8 (17-49)||(26954237-26954269)
chr8 (13-49)||(36486567-36486603)
chr8 (9-37)||(44781517-44781545)
[»] chr7 (33 HSPs)
chr7 (9-49)||(36602541-36602581)
chr7 (8-49)||(18747580-18747621)
chr7 (9-49)||(7879732-7879772)
chr7 (9-49)||(45018924-45018964)
chr7 (10-49)||(2541020-2541059)
chr7 (16-50)||(29907519-29907553)
chr7 (12-49)||(38262197-38262234)
chr7 (9-49)||(11617589-11617629)
chr7 (9-49)||(21172010-21172050)
chr7 (9-49)||(27889317-27889357)
chr7 (9-49)||(32758353-32758393)
chr7 (9-49)||(34626209-34626249)
chr7 (9-49)||(40463970-40464010)
chr7 (9-49)||(42391101-42391141)
chr7 (17-49)||(42805628-42805660)
chr7 (9-49)||(48735123-48735163)
chr7 (9-48)||(18512455-18512494)
chr7 (9-48)||(35334818-35334857)
chr7 (9-39)||(25434114-25434144)
chr7 (9-47)||(42495865-42495903)
chr7 (12-49)||(43557571-43557609)
chr7 (19-49)||(44171638-44171668)
chr7 (9-50)||(3469175-3469216)
chr7 (8-41)||(21566529-21566562)
chr7 (8-49)||(23231650-23231691)
chr7 (9-49)||(10693074-10693114)
chr7 (9-49)||(19426891-19426931)
chr7 (9-49)||(22698968-22699008)
chr7 (17-49)||(31591110-31591142)
chr7 (13-49)||(35787270-35787306)
chr7 (8-40)||(36267827-36267859)
chr7 (9-49)||(42798763-42798803)
chr7 (17-49)||(47716563-47716595)
[»] chr6 (20 HSPs)
chr6 (9-49)||(29355856-29355896)
chr6 (9-49)||(6808489-6808529)
chr6 (9-49)||(12886007-12886047)
chr6 (9-49)||(13267819-13267859)
chr6 (9-49)||(12221915-12221956)
chr6 (13-46)||(30786378-30786411)
chr6 (9-49)||(383761-383801)
chr6 (9-49)||(1347056-1347096)
chr6 (9-49)||(1354758-1354798)
chr6 (9-49)||(9161218-9161258)
chr6 (9-49)||(10734906-10734946)
chr6 (17-49)||(12892111-12892143)
chr6 (9-49)||(23930128-23930168)
chr6 (9-49)||(25557817-25557857)
chr6 (9-49)||(26097252-26097292)
chr6 (18-49)||(17432451-17432482)
chr6 (21-49)||(2166411-2166439)
chr6 (21-49)||(2178044-2178072)
chr6 (13-49)||(3116130-3116166)
chr6 (17-49)||(25997751-25997783)
[»] chr5 (32 HSPs)
chr5 (9-49)||(16957408-16957448)
chr5 (9-49)||(38879677-38879717)
chr5 (9-49)||(24448984-24449024)
chr5 (9-49)||(25622554-25622594)
chr5 (13-49)||(29184062-29184098)
chr5 (9-49)||(32354221-32354261)
chr5 (9-46)||(39801610-39801647)
chr5 (9-49)||(12006329-12006369)
chr5 (9-41)||(13774959-13774991)
chr5 (9-49)||(16028625-16028665)
chr5 (13-49)||(16880648-16880684)
chr5 (9-49)||(18099955-18099995)
chr5 (9-45)||(18684367-18684403)
chr5 (9-49)||(32703516-32703556)
chr5 (17-49)||(41014420-41014452)
chr5 (9-49)||(43334299-43334338)
chr5 (8-38)||(7097772-7097802)
chr5 (9-47)||(21784335-21784373)
chr5 (16-46)||(30006426-30006456)
chr5 (12-49)||(5873323-5873360)
chr5 (17-49)||(4619105-4619137)
chr5 (9-49)||(8169985-8170025)
chr5 (12-48)||(11462922-11462958)
chr5 (9-49)||(12575661-12575701)
chr5 (17-49)||(13801768-13801800)
chr5 (9-49)||(19093907-19093947)
chr5 (9-49)||(19438760-19438800)
chr5 (9-49)||(30877565-30877605)
chr5 (9-49)||(34154815-34154855)
chr5 (17-49)||(35710413-35710445)
chr5 (9-49)||(42924831-42924871)
chr5 (9-41)||(43574700-43574732)
[»] chr2 (36 HSPs)
chr2 (9-49)||(9671273-9671313)
chr2 (9-49)||(10543794-10543834)
chr2 (9-49)||(10546257-10546297)
chr2 (9-49)||(14530414-14530454)
chr2 (9-49)||(22371206-22371246)
chr2 (11-49)||(36871587-36871625)
chr2 (9-46)||(124918-124955)
chr2 (8-49)||(25249739-25249780)
chr2 (9-49)||(8455317-8455357)
chr2 (9-49)||(11514529-11514569)
chr2 (9-49)||(14444822-14444862)
chr2 (9-49)||(39914307-39914347)
chr2 (9-49)||(40579750-40579790)
chr2 (9-49)||(40762235-40762275)
chr2 (15-49)||(25632609-25632643)
chr2 (8-49)||(17668095-17668136)
chr2 (9-46)||(24859992-24860029)
chr2 (9-49)||(8575989-8576029)
chr2 (9-49)||(14544160-14544200)
chr2 (9-49)||(21779262-21779302)
chr2 (9-45)||(23488577-23488613)
chr2 (9-49)||(25079718-25079758)
chr2 (9-49)||(34080195-34080235)
chr2 (9-49)||(34766349-34766389)
chr2 (9-49)||(40416872-40416912)
chr2 (9-49)||(44643617-44643657)
chr2 (6-49)||(27573711-27573754)
chr2 (9-48)||(41409956-41409995)
chr2 (8-49)||(26684621-26684662)
chr2 (17-49)||(3633709-3633741)
chr2 (17-49)||(5841132-5841164)
chr2 (9-49)||(17896354-17896394)
chr2 (9-49)||(23052966-23053006)
chr2 (17-49)||(23397866-23397898)
chr2 (9-49)||(24200624-24200664)
chr2 (6-42)||(31523322-31523358)
[»] chr1 (42 HSPs)
chr1 (9-49)||(4349755-4349795)
chr1 (10-49)||(10668345-10668384)
chr1 (9-47)||(45402213-45402251)
chr1 (9-49)||(1517312-1517352)
chr1 (9-49)||(9939581-9939621)
chr1 (9-49)||(27474397-27474437)
chr1 (9-49)||(35005242-35005282)
chr1 (9-49)||(46247954-46247994)
chr1 (9-49)||(50606520-50606560)
chr1 (9-47)||(46991921-46991959)
chr1 (9-49)||(18944762-18944803)
chr1 (8-49)||(50760241-50760282)
chr1 (10-46)||(6925218-6925254)
chr1 (9-49)||(14617155-14617195)
chr1 (9-49)||(18741958-18741998)
chr1 (9-49)||(19414554-19414594)
chr1 (17-49)||(20004091-20004123)
chr1 (9-49)||(20999851-20999891)
chr1 (9-49)||(34725099-34725139)
chr1 (9-49)||(38478283-38478323)
chr1 (9-49)||(42304208-42304248)
chr1 (6-46)||(45812541-45812581)
chr1 (9-48)||(22325010-22325049)
chr1 (9-47)||(10378738-10378776)
chr1 (9-38)||(19701688-19701717)
chr1 (8-49)||(25554743-25554784)
chr1 (11-48)||(34679217-34679254)
chr1 (9-46)||(35019346-35019383)
chr1 (6-47)||(39214961-39215002)
chr1 (9-45)||(4587568-4587604)
chr1 (9-49)||(8197160-8197200)
chr1 (9-45)||(23768325-23768361)
chr1 (9-49)||(23796582-23796622)
chr1 (9-49)||(24564451-24564491)
chr1 (13-49)||(27201770-27201806)
chr1 (17-49)||(30395727-30395759)
chr1 (9-41)||(30555232-30555264)
chr1 (9-49)||(31272382-31272422)
chr1 (9-49)||(31382215-31382255)
chr1 (9-37)||(33594144-33594172)
chr1 (9-49)||(35253188-35253228)
chr1 (9-49)||(43768256-43768296)
[»] scaffold0258 (1 HSPs)
scaffold0258 (9-49)||(13025-13065)
[»] scaffold0018 (1 HSPs)
scaffold0018 (11-49)||(72868-72906)
[»] scaffold0049 (1 HSPs)
scaffold0049 (12-49)||(59076-59113)
[»] scaffold0311 (1 HSPs)
scaffold0311 (9-45)||(10904-10940)
[»] scaffold0168 (1 HSPs)
scaffold0168 (9-49)||(30671-30711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-49)||(48635-48675)
[»] scaffold1176 (1 HSPs)
scaffold1176 (9-46)||(1591-1628)
[»] scaffold0954 (1 HSPs)
scaffold0954 (8-49)||(3637-3678)
[»] scaffold0223 (1 HSPs)
scaffold0223 (9-49)||(11223-11263)
[»] scaffold0180 (1 HSPs)
scaffold0180 (9-49)||(24134-24174)


Alignment Details
Target: scaffold0003 (Bit Score: 339; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 138 - 649
Target Start/End: Original strand, 291834 - 292349
Alignment:
Q  138 ttaggatttagttg-ctattttgctagaaaattgtgctgccctatgagtttaagtgtacagacacacac------ttctacctaatctatattggaatgc 230  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||    
T  291834 ttaggatttagttgtctattttgccagaaaattgtgctgccctatgagtttaagtgtacatacacacacacacacttctacctaatctatattggaatgc 291933  T
Q  231 aannnnnnncccttttgatgaaagtgcaccaaggggtgtagctttattgaaggttagtannnnnnncttgttgcgtgtttcctgctacactgcatgttga 330  Q
    ||       |||| ||||||||||||||||||||| |||||||||||||||||||| |        |||| ||||| |||||||||||||||||||||||    
T  291934 aatttttttccctcttgatgaaagtgcaccaagggttgtagctttattgaaggttatt----ttttcttgctgcgtatttcctgctacactgcatgttga 292029  T
Q  331 ttggtctaagtacagattcagccatttagttagactggaaatttattctgaaattattttgttatcatatgcttgaa-gattcttgaagttcggcactgg 429  Q
    | ||||| |||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  292030 tcggtctgagtatagattcagccattaagttagattggaaatttattctgtaattattttgttatcatatgcttaaatgattcttgaagttcggcactgg 292129  T
Q  430 gagaccagaagttcaaccctgaatttagtttgcttcaagtcttttgactgaacgtatcagttagttttgaaaatgtaaagcattgtgtgttgaaccaaag 529  Q
    || |||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  292130 gaaaccagaagttcaaccctgaatttagtttgccttgagtcttttgactgaacgtatcggttagttttgaaaatgtaaagcattgtgcgttgaaccaaag 292229  T
Q  530 atagggttcaatttgactgaatagtgtgggctgtttgaattatgaatttactgatgaactgtctagctgtaaaagttctgattattattttgtcgatacc 629  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  292230 atagggttcaatttgactgaatagtgtgagctgtttgaattatgaatttaccgatgaactgtctagctgtaaaagttctgattattattttgtcgatacc 292329  T
Q  630 atcaaaatcggtacaaatcc 649  Q
    ||| ||||||||||||||||    
T  292330 atccaaatcggtacaaatcc 292349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 287; Significance: 1e-160; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 140 - 649
Target Start/End: Complemental strand, 45961998 - 45961509
Alignment:
Q  140 aggatttagttg-ctattttgctagaaaattgtgctgccctatgagtttaagtgtacagacacacacttctacctaatctatattggaatgcaannnnnn 238  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||          
T  45961998 aggatttagttgtctattttgccagaaaattgtgctgccgtatgaatttaagtgtacagacacacactgctacctaagctatattggaatgcaatttttt 45961899  T
Q  239 ncccttttgatgaaagtgcaccaaggggtgtagctttattgaaggttagtannnnnnncttgttgcgtgtttcctgctacactgcatgttgattggtcta 338  Q
     |||| ||||||||| || |||||||| |||||||||||||||||||||||       |||||||| | |||||| ||||||||||||||||| |||||     
T  45961898 tccctcttgatgaaattgtaccaagggttgtagctttattgaaggttagtatttttt-cttgttgcatatttccttctacactgcatgttgatcggtctg 45961800  T
Q  339 agtacagattcagccatttagttagactggaaatttattctgaaattattttgttatcatatgcttgaagattcttgaagttcggcactgggagaccaga 438  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| ||                    |||||||||||||||||||||||| || |||    
T  45961799 agtacacattcagccatttagttagattggaaatttattctgaaataat--------------------gattcttgaagttcggcactgggaaactaga 45961720  T
Q  439 agttcaaccctgaatttagtttgcttcaagtcttttgactgaacgtatcagttagttttgaaaatgtaaagcattgtgtgttgaaccaaagatagggttc 538  Q
    |||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||    
T  45961719 agttcagcgctgaatttagttttcttcgagtcttttgactgaacgtatcagttagttttgaaaatgtatagcattgtgcgttgaaccaaagataggggtc 45961620  T
Q  539 aatttgactgaatagtgtgggctgtttgaattatgaatttactgatgaactgtctagctgtaaaagttctgattattattttgtcgataccatcaaaatc 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45961619 aatttgactgaatagtgtgggctgtttgaattatgaatttactgatgaactgtctagctgtaaaagttctgattattattttgtcgataccatcaaaatc 45961520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 45962233 - 45962173
Alignment:
Q  48 ttcatgtgagcgttgcagagttatggtaagtaaccattgatttcaaatgtataatacttgga 109  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  45962233 ttcatgtgagcgttgcagagttatggtaagtgaccattcatttc-aatgtataatacttgga 45962173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11394946 - 11394986
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11394946 accctgcgtatgcgggagctttagtgcaccgggttgccctt 11394986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11404673 - 11404713
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11404673 accctgcgtatgcgggagctttagtgcaccgggttgccctt 11404713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 20639699 - 20639659
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20639699 accctgcgtatgcgggagctttagtgcaccgggttgccctt 20639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35532086 - 35532126
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35532086 accctgcgtatgcgggagctttagtgcaccgggttgccctt 35532126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 38755949 - 38755909
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38755949 accctgcgtatgcgggagctttagtgcaccgggttgccctt 38755909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40553978 - 40553938
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40553978 accctgcgtatgcgggagctttagtgcaccgggttgccctt 40553938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 44363171 - 44363131
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44363171 accctgcgtatgcgggagctttagtgcaccgggttgccctt 44363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 6430667 - 6430627
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  6430667 accctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 23501883 - 23501923
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  23501883 accctgcatatgcgggagctttagtgcaccgggttgccctt 23501923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30352621 - 30352581
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  30352621 accctgcgtatgcgggagctttagtgcaccgtgttgccctt 30352581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32484327 - 32484367
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  32484327 accctgcatatgcgggagctttagtgcaccgggttgccctt 32484367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 33836528 - 33836488
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  33836528 accctgcgtatgcgggagctttagtgcaacgggttgccctt 33836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 8473660 - 8473621
Alignment:
Q  10 ccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8473660 ccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 20225178 - 20225215
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgcccttcatgt 54  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20225178 tatgcgggagctttagtgcaccgggttgccctttatgt 20225215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 35567263 - 35567304
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  35567263 aaccctgcgtctgcgggagctttagtgcaccgggctgccctt 35567304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 5648352 - 5648392
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  5648352 accctgcgtatgcgggagcttcagtgcactgggttgccctt 5648392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 11054189 - 11054149
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  11054189 accctgcatatgcgggagctctagtgcaccgggttgccctt 11054149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 16408634 - 16408602
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  16408634 tatgcgggagctttagtgcaccgggttgccctt 16408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 20225076 - 20225116
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  20225076 accctgcatatgcgggagctctagtgcaccgggttgccctt 20225116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 25388270 - 25388310
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  25388270 accctgcgtatgcatgagctttagtgcaccgggttgccctt 25388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 25629151 - 25629183
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  25629151 tatgcgggagctttagtgcaccgggttgccctt 25629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 30639473 - 30639513
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  30639473 accctgcatatgcgggagctttagtgcactgggttgccctt 30639513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30690217 - 30690177
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  30690217 accctgcgtatgcgggagctttagtgcaccaggctgccctt 30690177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 36816425 - 36816385
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  36816425 accctgtgtatgcgggagctttagtgtaccgggttgccctt 36816385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 38786703 - 38786743
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  38786703 accctgcatatgcgggagctctagtgcaccgggttgccctt 38786743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 40915922 - 40915962
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  40915922 accctgcgtatgcgggagcttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 44718661 - 44718701
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  44718661 accctgcgtatgcgggagctttagcacaccgggttgccctt 44718701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 54175159 - 54175199
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  54175159 accctgcatatgcgggagctttagtgcaccgggctgccctt 54175199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 56323002 - 56323034
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  56323002 tatgcgggagctttagtgcaccgggttgccctt 56323034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 17315371 - 17315336
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17315371 tgcgtatgcgggagctttagtgcactgggttgccct 17315336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 29207939 - 29207900
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  29207939 accctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 7909323 - 7909281
Alignment:
Q  8 aaccctgcgtatgcggg-agctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  7909323 aaccctgcgtatgcggggagctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 13256430 - 13256400
Alignment:
Q  19 tgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||    
T  13256430 tgcgggagctttagtgcaccgggttgccctt 13256400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 21647068 - 21647098
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccc 47  Q
    |||||||||||||||||||||||||||||||    
T  21647068 tatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 54730346 - 54730376
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccg 39  Q
    |||||||||||||||||||||||||||||||    
T  54730346 accctgcgtatgcgggagctttagtgcaccg 54730376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 20908678 - 20908649
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcac 37  Q
    ||||||||||||||||||||||||||||||    
T  20908678 aaccctgcgtatgcgggagctttagtgcac 20908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 21489181 - 21489218
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  21489181 aaccctgcgtatgcgggagctttcgtgcactgggttgc 21489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 37038164 - 37038135
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcacc 38  Q
    ||||||||||||||||||||||||||||||    
T  37038164 accctgcgtatgcgggagctttagtgcacc 37038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 39077837 - 39077800
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  39077837 accctgcatatgcgggagctctagtgcaccgggttgcc 39077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 12666894 - 12666858
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  12666894 tgcgtatgcaggagctttagtacaccgggttgccctt 12666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14983928 - 14983968
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  14983928 accctgcgtatgcgggagctttagtgtaccatgttgccctt 14983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16911658 - 16911698
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||    
T  16911658 accctgcgtacgcgggagctttagtttaccgggttgccctt 16911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 19028013 - 19028045
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||| |||||||    
T  19028013 tatgcgggagctttagtgcaccgggctgccctt 19028045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 19425923 - 19425959
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  19425923 tgcgtatgcgggagctttagtacaccggattgccctt 19425959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 50555697 - 50555657
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||| |||||||||||||| |||||||    
T  50555697 accctgcgtatgcaggagttttagtgcaccgggctgccctt 50555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 51865079 - 51865039
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||| ||||||||  |||||||    
T  51865079 accctgcgtatgcgggagctttattgcaccggactgccctt 51865039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 55766503 - 55766467
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||| |||||||||||||||||| |||||||    
T  55766503 tgcgtatgcgagagctttagtgcaccgggatgccctt 55766467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 40390356 - 40390397
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40390356 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 40390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 516528 - 516568
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  516528 accctgcgtatgcgggagctttagtgcaccgggttgccctt 516568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 4495717 - 4495677
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4495717 accctgcgtatgcgggagctttagtgcaccgggttgccctt 4495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 10484657 - 10484617
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10484657 accctgcgtatgcgggagctttagtgcaccgggttgccctt 10484617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 13628831 - 13628791
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13628831 accctgcgtatgcgggagctttagtgcaccgggttgccctt 13628791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40272853 - 40272813
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40272853 accctgcgtatgcgggagctttagtgcaccgggttgccctt 40272813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 47624215 - 47624255
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47624215 accctgcgtatgcgggagctttagtgcaccgggttgccctt 47624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 54032612 - 54032572
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  54032612 accctgcgtatgcgggagctttagtgcaccgggttgccctt 54032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 54484807 - 54484847
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  54484807 accctgcgtatgcgggagctttagtgcaccgggttgccctt 54484847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 14266414 - 14266373
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  14266414 aaccctgcgtatgcgggagctttagtgcactgggttgccctt 14266373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 5173756 - 5173720
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||    
T  5173756 tgcgtatgcgggagctttagtgcaccgggttgccctt 5173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 52926260 - 52926220
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  52926260 accctgcgtatgcgggagctttagcgcaccgggttgccctt 52926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 23871484 - 23871522
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23871484 cctgcgtatgcgggaactttagtgcaccgggttgccctt 23871522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 24851340 - 24851302
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24851340 cctgcatatgcgggagctttagtgcaccgggttgccctt 24851302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 25517209 - 25517171
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25517209 cctgcgtatgctggagctttagtgcaccgggttgccctt 25517171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 1217204 - 1217244
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  1217204 accctgcatatgcgggagctctagtgcaccgggttgccctt 1217244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 10795464 - 10795424
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  10795464 accctgcgtatgcgggagcttcagtgcaccaggttgccctt 10795424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13730635 - 13730603
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  13730635 tatgcgggagctttagtgcaccgggttgccctt 13730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 22609885 - 22609921
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22609885 tgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 26869826 - 26869862
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||| ||||||||||||||||||    
T  26869826 tgcgtatgcgggagctttggtgcaccgggttgccctt 26869862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 29366761 - 29366721
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  29366761 accctgcgtatgtgggagctttagtgcactgggttgccctt 29366721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 30452911 - 30452951
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  30452911 accctgcatatgcgggagctctagtgcaccgggttgccctt 30452951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 31592963 - 31593003
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  31592963 accctgcatatgcgggagctctagtgcaccgggttgccctt 31593003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 39203638 - 39203670
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  39203638 tatgcgggagctttagtgcaccgggttgccctt 39203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 43956513 - 43956473
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  43956513 acccagcgtatgcgggagctttagtgcaccgggctgccctt 43956473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 45786255 - 45786215
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  45786255 accctgcgaatgctggagctttagtgcaccgggttgccctt 45786215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 353382 - 353351
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||||||||||||||||||||||||||||    
T  353382 tatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 45948879 - 45948848
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgg 40  Q
    ||||||||||||||||||||||||||||||||    
T  45948879 accctgcgtatgcgggagctttagtgcaccgg 45948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31831302 - 31831348
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcccttcatgtg 55  Q
    ||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  31831302 accctgcatatgcgggtgctctagtgcaccgggttgccctttatgtg 31831348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 7943110 - 7943143
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||||||||||||||||||||||| ||||||||    
T  7943110 tgcgtatgcgggagctttagtgcactgggttgcc 7943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 46421076 - 46421035
Alignment:
Q  9 accctgcgtatgcgggagcttt-agtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  46421076 accctgcgtatgcgggagctttaagtgcaccggtttgccctt 46421035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 49013503 - 49013474
Alignment:
Q  20 gcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||    
T  49013503 gcgggagctttagtgcaccgggttgccctt 49013474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 53996603 - 53996566
Alignment:
Q  12 ctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  53996603 ctgcgtatgtgggagctttagtgcaccgggctgccctt 53996566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 829484 - 829452
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgg 40  Q
    |||||||||||||| ||||||||||||||||||    
T  829484 aaccctgcgtatgcaggagctttagtgcaccgg 829452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 6242326 - 6242286
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||| |||||| ||||||||||||||||||||    
T  6242326 accctgcatatgcaggagctctagtgcaccgggttgccctt 6242286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 8247728 - 8247688
Alignment:
Q  9 accctgcgtatgcgggagcttt-agtgcaccgggttgccct 48  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  8247728 accctgcgtatgcgggagctttaagtgcactgggttgccct 8247688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12914076 - 12914036
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||| | |||||||||||||||||    
T  12914076 accctgcatatgcgggagcttcaatgcaccgggttgccctt 12914036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 14987083 - 14987115
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||| |||||    
T  14987083 tatgcgggagctttagtgcaccgggtttccctt 14987115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 15797336 - 15797376
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||| ||||||| ||||||||||||||||||||    
T  15797336 accctgcatatgtgggagctctagtgcaccgggttgccctt 15797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 22122958 - 22122918
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||| ||||| ||||||||||||||||||||    
T  22122958 accctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 34771405 - 34771365
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  34771405 accctgcatatgcgggagctctagtgcaccgggctgccctt 34771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 46925 - 46965
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46925 accctgcgtatgcgggagctttagtgcaccgggttgccctt 46965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 24814 - 24773
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  24814 aaccctgcgtatgcgggagctttagtgcagccggttgccctt 24773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 12625984 - 12626024
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12625984 accctgcgtatgcgggagctttagtgcaccgggttgccctt 12626024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 27468133 - 27468093
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27468133 accctgcgtatgcgggagctttagtgcaccgggttgccctt 27468093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35261773 - 35261813
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35261773 accctgcgtatgcgggagctttagtgcaccgggttgccctt 35261813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 39461035 - 39460995
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39461035 accctgcgtatgcgggagctttagtgcaccgggttgccctt 39460995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 18164801 - 18164764
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18164801 accctgcgtatgcgggagctttagtgcaccgggttgcc 18164764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 27508003 - 27508044
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  27508003 aaccctgcgtatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 10857927 - 10857963
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||    
T  10857927 tgcgtatgcgggagctttagtgcaccgggttgccctt 10857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 28817667 - 28817627
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  28817667 accctgcgtatgcgggagctttagtgcatcgggttgccctt 28817627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 29521726 - 29521690
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    |||||||||||||||||||||||||||||||||||||    
T  29521726 accctgcgtatgcgggagctttagtgcaccgggttgc 29521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 44530243 - 44530283
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  44530243 accctgcgtatgcgggagctttagtgcaccgggttgacctt 44530283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 31457263 - 31457306
Alignment:
Q  6 caaaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  31457263 caaaccctgcgtatgcgggagctctagtgcaccggattgccctt 31457306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17823669 - 17823710
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  17823669 aaccctgcatatgcaggagctttagtgcaccgggttgccctt 17823710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 33867045 - 33867086
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  33867045 aaccctgcgtatgcagaagctttagtgcaccgggttgccctt 33867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 6760926 - 6760958
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  6760926 tatgcgggagctttagtgcaccgggttgccctt 6760958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 13160795 - 13160835
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  13160795 accctgcgtatgcgggagcttcagtgcgccgggttgccctt 13160835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16013550 - 16013590
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  16013550 accctgcctatgcgggagctttagtgcaccgggttgtcctt 16013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 20870027 - 20870059
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  20870027 tatgcgggagctttagtgcaccgggttgccctt 20870059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 26102611 - 26102651
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  26102611 accctgcttatgcgggagctctagtgcaccgggttgccctt 26102651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 28407497 - 28407537
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  28407497 accctacgtatgcgggagctttactgcaccgggttgccctt 28407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30454138 - 30454098
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  30454138 accctgcatatgcgggagctctagtgcaccgggttgccctt 30454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30962812 - 30962772
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  30962812 accctgcgtatgcgggagatttagtgaaccgggttgccctt 30962772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 36720890 - 36720930
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  36720890 accctgcgtatgcggaagctttagtgcacccggttgccctt 36720930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 45071362 - 45071398
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45071362 tgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 20284110 - 20284075
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttg 44  Q
    |||||||||||||||||| |||||||||||||||||    
T  20284110 accctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 21070738 - 21070703
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttg 44  Q
    |||||||||||||||||| |||||||||||||||||    
T  21070738 accctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 23000260 - 23000229
Alignment:
Q  18 atgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||    
T  23000260 atgcgggagctttagtgcaccgggttgccctt 23000229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 40604949 - 40604907
Alignment:
Q  7 aaaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||||||||||||||||  ||||||||    
T  40604949 aaaccctacgtatgcgggagctttagtgcaccgaattgccctt 40604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 25250617 - 25250658
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  25250617 aaccccgcatatgcgggagatttagtgcaccgggttgccctt 25250658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 35107345 - 35107312
Alignment:
Q  16 gtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||| |||||||||||||||||||||||||    
T  35107345 gtatgcggaagctttagtgcaccgggttgccctt 35107312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 7136560 - 7136528
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||| |||||    
T  7136560 tatgcgggagctttagtgcaccgggttaccctt 7136528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 8483979 - 8483947
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccggg 41  Q
    |||||||||||||||||||||||| ||||||||    
T  8483979 accctgcgtatgcgggagctttagggcaccggg 8483947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8897805 - 8897765
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||| |||||| ||||||||||    
T  8897805 accctgcatatgcgggagctttactgcacccggttgccctt 8897765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12670291 - 12670251
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| |||||||||||||| |||||    
T  12670291 accctgcatatgcgggagctctagtgcaccgggttaccctt 12670251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 16225123 - 16225155
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| ||||    
T  16225123 tatgcgggagctttagtgcaccgggttgtcctt 16225155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23286378 - 23286338
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  23286378 accctgcatatgcgggagctctagtgcaccgggctgccctt 23286338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 26954237 - 26954269
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||||||||    
T  26954237 tatgcgggagctttagtgcactgggttgccctt 26954269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 36486603 - 36486567
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  36486603 tgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 44781545 - 44781517
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcac 37  Q
    |||||||||||||||||||||||||||||    
T  44781545 accctgcgtatgcgggagctttagtgcac 44781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 36602541 - 36602581
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36602541 accctgcgtatgcgggagctttagtgcaccgggttgccctt 36602581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 18747580 - 18747621
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  18747580 aaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 7879732 - 7879772
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7879732 accctgcgtatgcgggagcttcagtgcaccgggttgccctt 7879772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 45018964 - 45018924
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  45018964 accctgcgtatgcgggagctttagtgcaccaggttgccctt 45018924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 2541059 - 2541020
Alignment:
Q  10 ccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  2541059 ccctgcgtatgcgggagctttagtgcaccgggtttccctt 2541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 29907519 - 29907553
Alignment:
Q  16 gtatgcgggagctttagtgcaccgggttgcccttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  29907519 gtatgcgggagctttagtgcaccgggttgcccttc 29907553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 38262234 - 38262197
Alignment:
Q  12 ctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  38262234 ctgcgtatgcgggagctttagtgcaccggattgccctt 38262197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 11617629 - 11617589
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  11617629 accctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 21172050 - 21172010
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  21172050 accctgcatatgcgggagctctagtgcaccgggttgccctt 21172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 27889357 - 27889317
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  27889357 accctgcgtatgcgggagctttggtacaccgggttgccctt 27889317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32758353 - 32758393
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  32758353 accctgcatatgcgggagctctagtgcaccgggttgccctt 32758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 34626249 - 34626209
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  34626249 accctgcgtatgcgggagctttagttcatcgggttgccctt 34626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 40463970 - 40464010
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  40463970 accctgcgtatgcgggagcttcagtgcaccgagttgccctt 40464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42391141 - 42391101
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  42391141 accctgcatatgcgggagctctagtgcaccgggttgccctt 42391101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 42805628 - 42805660
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  42805628 tatgcgggagctttagtgcaccgggttgccctt 42805660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 48735163 - 48735123
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  48735163 accctgcatatgcgggagctctagtgcaccgggttgccctt 48735123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 18512494 - 18512455
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  18512494 accctgcgtatgcgggagctttggtgcactgggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 35334857 - 35334818
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  35334857 accctgcgtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 25434114 - 25434144
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccg 39  Q
    |||||||||||||||||||||||||||||||    
T  25434114 accctgcgtatgcgggagctttagtgcaccg 25434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 42495903 - 42495865
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  42495903 accctgcgtatgcgggagctttagtgcaccccgttgccc 42495865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 43557571 - 43557609
Alignment:
Q  12 ctgcgtatgcgggagcttt-agtgcaccgggttgccctt 49  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  43557571 ctgcgtatgcgggagcttttagtgcaccgggttgccctt 43557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 44171668 - 44171638
Alignment:
Q  19 tgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||    
T  44171668 tgcgggagctttagtgcaccgggttgccctt 44171638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 3469216 - 3469175
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcccttc 50  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  3469216 accctgtgtatgcgggagctttagtgcgctgggttgcccttc 3469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 21566529 - 21566562
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccggg 41  Q
    |||||||| |||||||||||||||||||||||||    
T  21566529 aaccctgcatatgcgggagctttagtgcaccggg 21566562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 23231650 - 23231691
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||| ||||||||||||||| ||| |||||    
T  23231650 aaccctgcgtatgcggcagctttagtgcaccgagtttccctt 23231691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 10693114 - 10693074
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| |||||||| |||||||||||    
T  10693114 accctgcatatgcgggagctctagtgcactgggttgccctt 10693074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 19426931 - 19426891
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||| |||||| |||||||||||||||||||    
T  19426931 accctgcatatgcgagagcttcagtgcaccgggttgccctt 19426891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 22699008 - 22698968
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||| |||||||||||||| |||||    
T  22699008 accctgtgtatgcgggagctatagtgcaccgggttaccctt 22698968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 31591142 - 31591110
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||    
T  31591142 tatgcgggagctctagtgcaccgggttgccctt 31591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 35787306 - 35787270
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||| | |||||||||||||||||    
T  35787306 tgcgtatgcgggagcttcaatgcaccgggttgccctt 35787270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 36267859 - 36267827
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgg 40  Q
    ||||||| |||||||||||||||||||||||||    
T  36267859 aaccctgtgtatgcgggagctttagtgcaccgg 36267827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 42798763 - 42798803
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||| ||||||||||||    
T  42798763 accctgcatatgcgggagctatagtgcatcgggttgccctt 42798803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 47716563 - 47716595
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||| ||||||||||||||||||    
T  47716563 tatgcgggagctttggtgcaccgggttgccctt 47716595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 29355896 - 29355856
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29355896 accctgcgtatgcgggagctttagtgcaccgggttgccctt 29355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 6808489 - 6808529
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  6808489 accctgtgtatgcgggagctttagtgcaccgggttgccctt 6808529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 12886007 - 12886047
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  12886007 accctgcgtatgtgggagctttagtgcaccgggttgccctt 12886047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 13267819 - 13267859
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13267819 accctgcgtatgcgggagcttcagtgcaccgggttgccctt 13267859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12221956 - 12221915
Alignment:
Q  9 accctgcgtatgcgggagcttt-agtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  12221956 accctgcgtatgcgggagcttttagtgcaccgggttgccctt 12221915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 30786411 - 30786378
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  30786411 tgcgtatgcgggagctttagtgcaccgggttgcc 30786378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 383801 - 383761
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  383801 accctgcgtatgcgggagcttcagtccaccgggttgccctt 383761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 1347056 - 1347096
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  1347056 accctgcatatgcgggagctctagtgcaccgggttgccctt 1347096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 1354798 - 1354758
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  1354798 accctgcatatgcgggagctctagtgcaccgggttgccctt 1354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 9161218 - 9161258
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  9161218 accctgcgtatgcggaagctttagtgcaccaggttgccctt 9161258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 10734946 - 10734906
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  10734946 accctgcgtatgcgggagctttagtccaccgggctgccctt 10734906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 12892111 - 12892143
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  12892111 tatgcgggagctttagtgcaccgggttgccctt 12892143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23930168 - 23930128
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  23930168 accctgcttatgcgggagctttagtgcaccgagttgccctt 23930128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 25557817 - 25557857
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  25557817 accctgcatatgcgggagctctagtgcaccgggttgccctt 25557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 26097252 - 26097292
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  26097252 accctgcatatgcgggagctctagtgcaccgggttgccctt 26097292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 17432451 - 17432482
Alignment:
Q  18 atgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||    
T  17432451 atgcgggagctttagtgcaccgggttgccctt 17432482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 2166439 - 2166411
Alignment:
Q  21 cgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||    
T  2166439 cgggagctttagtgcaccgggttgccctt 2166411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 2178072 - 2178044
Alignment:
Q  21 cgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||    
T  2178072 cgggagctttagtgcaccgggttgccctt 2178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 3116166 - 3116130
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  3116166 tgcgtatgcgggagctttagtacaccggattgccctt 3116130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 25997751 - 25997783
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||    
T  25997751 tatgcgggagctctagtgcaccgggttgccctt 25997783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16957408 - 16957448
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16957408 accctgcgtatgcgggagctttagtgcaccgggttgccctt 16957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 38879677 - 38879717
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38879677 accctgcgtatgcgggagctttagtgcaccgggttgccctt 38879717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 24448984 - 24449024
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  24448984 accctgcgtatgcaggagctttagtgcaccgggttgccctt 24449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 25622554 - 25622594
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  25622554 accctgcgtatgcgggagctttagtgcaccggattgccctt 25622594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 29184098 - 29184062
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||    
T  29184098 tgcgtatgcgggagctttagtgcaccgggttgccctt 29184062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32354221 - 32354261
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  32354221 accctgtgtatgcgggagctttagtgcaccgggttgccctt 32354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 39801610 - 39801647
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  39801610 accctacgtatgcgggagctttagtgcaccgggttgcc 39801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12006369 - 12006329
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  12006369 accctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 13774959 - 13774991
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccggg 41  Q
    |||||||||||||||||||||||||||||||||    
T  13774959 accctgcgtatgcgggagctttagtgcaccggg 13774991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 16028665 - 16028625
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  16028665 accctgcatatgcgggagctctagtgcaccgggttgccctt 16028625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16880684 - 16880648
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16880684 tgcgtatgcgggagctttagtgcaccgggtttccctt 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 18099955 - 18099995
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  18099955 accctgcgtatgcgggagctttagtgcactgggtttccctt 18099995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 18684367 - 18684403
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18684367 accctgcgtatgcgggagctttagtgcatcgggttgc 18684403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32703516 - 32703556
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  32703516 accctgcatatgcgggagctctagtgcaccgggttgccctt 32703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 41014420 - 41014452
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  41014420 tatgcgggagctttagtgcaccgggttgccctt 41014452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 43334299 - 43334338
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  43334299 accctgcg-atgcgggagctttagtgcaccgggttgccctt 43334338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 7097802 - 7097772
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcacc 38  Q
    |||||||||||||||||||||||||||||||    
T  7097802 aaccctgcgtatgcgggagctttagtgcacc 7097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 21784373 - 21784335
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  21784373 accctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 46
Target Start/End: Original strand, 30006426 - 30006456
Alignment:
Q  16 gtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||||||||||||||||||||||||||||||    
T  30006426 gtatgcgggagctttagtgcaccgggttgcc 30006456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 5873360 - 5873323
Alignment:
Q  12 ctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  5873360 ctgcgtatgcgggagctttagtgcatcgggatgccctt 5873323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 4619137 - 4619105
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||||||||||    
T  4619137 tatgcgagagctttagtgcaccgggttgccctt 4619105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8170025 - 8169985
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||| || |||||||||||||||||||    
T  8170025 accctgcatatgcgggagtttcagtgcaccgggttgccctt 8169985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 11462922 - 11462958
Alignment:
Q  12 ctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    |||| |||||||||||| |||||||||||||||||||    
T  11462922 ctgcatatgcgggagctctagtgcaccgggttgccct 11462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12575701 - 12575661
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  12575701 accctgcgtatgcaggagctttggtgcaccgggctgccctt 12575661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13801800 - 13801768
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||||||||||    
T  13801800 tatgcgagagctttagtgcaccgggttgccctt 13801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19093907 - 19093947
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  19093907 accctgcgtatgttggagctttagtgcaccgggctgccctt 19093947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19438760 - 19438800
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||| ||||||||||    
T  19438760 accctgcatatgcgggagctctagtgcaccaggttgccctt 19438800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30877605 - 30877565
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||| ||||||| ||||||||||||||||||||    
T  30877605 accctgcatatgtgggagctctagtgcaccgggttgccctt 30877565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 34154855 - 34154815
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||| |||| ||||||||||||||||||||    
T  34154855 accctgcatatgcggtagctctagtgcaccgggttgccctt 34154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 35710413 - 35710445
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||    
T  35710413 tatgcgggagctctagtgcaccgggttgccctt 35710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42924871 - 42924831
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||| |||||||||||||||| ||| ||||    
T  42924871 accctgcgtatgcggaagctttagtgcaccggattgtcctt 42924831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 43574700 - 43574732
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccggg 41  Q
    |||||||||||||||||||||||| ||||||||    
T  43574700 accctgcgtatgcgggagctttagagcaccggg 43574732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 9671273 - 9671313
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9671273 accctgcgtatgcgggagctttagtgcaccgggttgccctt 9671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 10543794 - 10543834
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10543794 accctgcgtatgcgggagctttagtgcaccgggttgccctt 10543834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 10546257 - 10546297
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10546257 accctgcgtatgcgggagctttagtgcaccgggttgccctt 10546297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14530414 - 14530454
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14530414 accctgcgtatgcgggagctttagtgcaccgggttgccctt 14530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 22371206 - 22371246
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22371206 accctgcgtatgcgggagctttagtgcaccgggttgccctt 22371246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 36871587 - 36871625
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36871587 cctgcgtatgcgggagctttagtgcaccgggttgccctt 36871625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 124955 - 124918
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  124955 accctgcgtatgcgggagctttagtgcaccgggttgcc 124918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 25249780 - 25249739
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  25249780 aaccctgcgtatgcgtgagctttagtgcaccgggttgccctt 25249739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8455357 - 8455317
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  8455357 accctgcgtatgccggagctttagtgcaccgggttgccctt 8455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11514529 - 11514569
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  11514529 accctgcgtatgcgggagctttagtgcaccggattgccctt 11514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14444822 - 14444862
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  14444822 accctgcgtatgcgggagctttagtgcaccaggttgccctt 14444862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 39914347 - 39914307
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  39914347 accctgcgtatgcgggagctttagtgcatcgggttgccctt 39914307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40579790 - 40579750
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  40579790 accctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40762275 - 40762235
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  40762275 accctgcgtatgtgggagctttagtgcaccgggttgccctt 40762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 25632609 - 25632643
Alignment:
Q  15 cgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  25632609 cgtatgcgggagctttagtgcaccgggttgccctt 25632643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17668095 - 17668136
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  17668095 aaccctgcgtatatgggagctttagtgcaccgggttgccctt 17668136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 24860029 - 24859992
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24860029 accctgcgtatgcgggagctttagtgcaccggattgcc 24859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 8575989 - 8576029
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  8575989 accctgcgtatgtgggagctttagtgcaccaggttgccctt 8576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14544160 - 14544200
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  14544160 accctgcgtatgcgggagctttagtgcaccaagttgccctt 14544200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 21779302 - 21779262
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  21779302 accctgcatatgcgggagctctagtgcaccgggttgccctt 21779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 23488577 - 23488613
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    |||||||||||||| ||||||||||||||||||||||    
T  23488577 accctgcgtatgcgagagctttagtgcaccgggttgc 23488613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 25079758 - 25079718
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  25079758 accctgcgtatgcaagagctttagtgcaccgggttgccctt 25079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 34080195 - 34080235
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  34080195 accctgcatatgcgggagttttagtgcaccgggttgccctt 34080235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 34766349 - 34766389
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  34766349 accctgcgtatgcgggagctttagtgcaacgggtttccctt 34766389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 40416912 - 40416872
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  40416912 accctgcatatgcgagagctttagtgcaccgggttgccctt 40416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 44643617 - 44643657
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  44643617 accctgcgtatgcgggagccttagtgcaccgggctgccctt 44643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 27573711 - 27573754
Alignment:
Q  6 caaaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  27573711 caaaccctgtgtatgtgggagctttagtgcatcgggttgccctt 27573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 41409956 - 41409995
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  41409956 accctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 26684662 - 26684621
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  26684662 aaccctgcgtatgcgggagctttaatgcaccggattgtcctt 26684621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 3633741 - 3633709
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||| |||||||||    
T  3633741 tatgcgggagctttagtgcaccgagttgccctt 3633709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 5841132 - 5841164
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||| |||||||||    
T  5841132 tatgcgggagctttagtgcaccgagttgccctt 5841164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17896354 - 17896394
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||| || |||||||||    
T  17896354 accctgcgtatgtgggagctttagtgcatcgagttgccctt 17896394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23053006 - 23052966
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  23053006 accctgcgtatgcaggagcttttgtgcaccgggctgccctt 23052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 23397866 - 23397898
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||||    
T  23397866 tatgcgggagctctagtgcaccgggttgccctt 23397898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 24200664 - 24200624
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||| ||||| | ||||||||||||||||||||||||||    
T  24200664 accctgagtatgtgagagctttagtgcaccgggttgccctt 24200624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 31523322 - 31523358
Alignment:
Q  6 caaaccctgcgtatgcgggagctttagtgcaccgggt 42  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  31523322 caaaccctgcatatgcgggagctttagtgcactgggt 31523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 4349755 - 4349795
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4349755 accctgcgtatgcgggagctttagtgcaccgggttgccctt 4349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 10668345 - 10668384
Alignment:
Q  10 ccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10668345 ccctgcgtatgcgggagctttagtgcaccgggttgccctt 10668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 45402213 - 45402251
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45402213 accctgcgtatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 1517352 - 1517312
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1517352 accctgcgtatgcaggagctttagtgcaccgggttgccctt 1517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 9939581 - 9939621
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  9939581 accctgcgtatgcgggagctttagtgcaccgggttaccctt 9939621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 27474397 - 27474437
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  27474397 accctgcgtatgcgggagctttagtgcaccggattgccctt 27474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35005242 - 35005282
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  35005242 accctgcgtatgcgggcgctttagtgcaccgggttgccctt 35005282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 46247994 - 46247954
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  46247994 accctgcgtatgcgggagctttagtgtaccgggttgccctt 46247954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 50606520 - 50606560
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  50606520 accctgcatatgcgggagctttagtgcaccgggttgccctt 50606560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 46991921 - 46991959
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  46991921 accctgcgtatgtgggagctttagtgcaccgggttgccc 46991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 18944762 - 18944803
Alignment:
Q  9 accctgcgtatgcgggagc-tttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18944762 accctgcgtatgcgggagcttttagtgcaccgggttgccctt 18944803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 50760282 - 50760241
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  50760282 aaccctgcgtatgcgggagctttaatgcaccgggctgccctt 50760241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 6925218 - 6925254
Alignment:
Q  10 ccctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||||||||||||||||||||||||||||| ||||||    
T  6925218 ccctgcgtatgcgggagctttagtgcaccgagttgcc 6925254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14617155 - 14617195
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  14617155 accctgcatatgcgggagctttagtgcaccgggttaccctt 14617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 18741998 - 18741958
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  18741998 accctgcgtatgcgagagctttagtgcaccgggtttccctt 18741958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19414554 - 19414594
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  19414554 accctgcatatgcgggagctctagtgcaccgggttgccctt 19414594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 20004123 - 20004091
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||||||||    
T  20004123 tatgcgggagctttagtgcaccgggttgccctt 20004091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 20999891 - 20999851
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  20999891 accctgcgtacgcgggagctttagtgcaccgggctgccctt 20999851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 34725139 - 34725099
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  34725139 accctgcatatgcgggagctctagtgcaccgggttgccctt 34725099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 38478323 - 38478283
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  38478323 accctgcatatgcgggagctctagtgcaccgggttgccctt 38478283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42304248 - 42304208
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  42304248 accctgcgtatgtgggagctttagtgcaccggattgccctt 42304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 45812581 - 45812541
Alignment:
Q  6 caaaccctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  45812581 caaaccctgcatatgcgggagctctagtgcaccgggttgcc 45812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 22325010 - 22325049
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  22325010 accctgcgtatgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 10378776 - 10378738
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  10378776 accctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 19701688 - 19701717
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcacc 38  Q
    ||||||||||||||||||||||||||||||    
T  19701688 accctgcgtatgcgggagctttagtgcacc 19701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 25554784 - 25554743
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  25554784 aaccctgcgtatgcgggagcattagtgcaccggactgccctt 25554743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 34679254 - 34679217
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccct 48  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  34679254 cctgcgtatgcgggagctttagtacaccgggctgccct 34679217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 35019346 - 35019383
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  35019346 accctgcgtatgcgagagctttagtgcaccgggctgcc 35019383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 39215002 - 39214961
Alignment:
Q  6 caaaccctgcgtatgcgggagctttagtgcaccgggttgccc 47  Q
    ||||||||||||||| || ||||||||||||||||| |||||    
T  39215002 caaaccctgcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 4587604 - 4587568
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  4587604 accctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 8197160 - 8197200
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  8197160 accctgcgtatgttggagctttagtgtaccgggttgccctt 8197200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 23768361 - 23768325
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  23768361 accctgcgtatgcgggagctttagtgcagcggattgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 23796582 - 23796622
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||| ||||||||||||||||||| |||||||    
T  23796582 accctgcatatgctggagctttagtgcaccgggctgccctt 23796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 24564451 - 24564491
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||| ||||| |||||||||||||||||||||    
T  24564451 accctgcctatgcaggagcgttagtgcaccgggttgccctt 24564491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 27201770 - 27201806
Alignment:
Q  13 tgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||  |||||||||||    
T  27201770 tgcgtatgcgggagctttagtgcattgggttgccctt 27201806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 30395759 - 30395727
Alignment:
Q  17 tatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||| |||||||||    
T  30395759 tatgcgggagctttagtgcaccgagttgccctt 30395727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 30555232 - 30555264
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccggg 41  Q
    |||||||||||||| ||||||||||||||||||    
T  30555232 accctgcgtatgcgagagctttagtgcaccggg 30555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 31272422 - 31272382
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||| || ||| |||||||    
T  31272422 accctgcgtatgcgggagctttagtggactgggctgccctt 31272382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 31382255 - 31382215
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| ||||||||||||||| || ||||||||||||||    
T  31382255 accctgcatatgcgggagctttactgtaccgggttgccctt 31382215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 33594172 - 33594144
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcac 37  Q
    |||||||||||||||||||||||||||||    
T  33594172 accctgcgtatgcgggagctttagtgcac 33594144  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35253228 - 35253188
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||| ||||||||    
T  35253228 accctgcatatgcgggagctctagtgcaccggattgccctt 35253188  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 43768256 - 43768296
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  43768256 accctgcgtatacgggagctttaatgcaccgggctgccctt 43768296  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 13065 - 13025
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  13065 accctgcgtatgcgggggctttagtgcaccgggttgccctt 13025  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 72906 - 72868
Alignment:
Q  11 cctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  72906 cctgcgtatgcgggagctttagtgcaccaggttgccctt 72868  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 59076 - 59113
Alignment:
Q  12 ctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  59076 ctgcgtatgcgggagctttagtgcatcgggttgccctt 59113  T

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Target: scaffold0311 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 10904 - 10940
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgc 45  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10904 accctgcgtatgcgggagctttagtgcactgggttgc 10940  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 30671 - 30711
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  30671 accctgcatatgcgggagctctagtgcaccgggttgccctt 30711  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 48675 - 48635
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  48675 accctgcatatgcgggagctctagtgcaccgggttgccctt 48635  T

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Target: scaffold1176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 1628 - 1591
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgcc 46  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  1628 acccggcgtatgcgggagctttagtgcaccaggttgcc 1591  T

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Target: scaffold0954 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 3637 - 3678
Alignment:
Q  8 aaccctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    |||||||||||||||| ||||||||||||||| ||| |||||    
T  3637 aaccctgcgtatgcggcagctttagtgcaccgagtttccctt 3678  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11223 - 11263
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||| ||||||||||    
T  11223 accctgcatatgcgggagctctagtgcaccaggttgccctt 11263  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 24174 - 24134
Alignment:
Q  9 accctgcgtatgcgggagctttagtgcaccgggttgccctt 49  Q
    ||||||| |||||||||||| ||||||||||| ||||||||    
T  24174 accctgcatatgcgggagctctagtgcaccggattgccctt 24134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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