View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5792-Insertion-5 (Length: 420)
Name: NF5792-Insertion-5
Description: NF5792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5792-Insertion-5 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 8 - 420
Target Start/End: Original strand, 35925803 - 35926219
Alignment:
| Q |
8 |
cttatgccagtagctaagctcaaataatgataattatctggttcctaaaaaattataagaacgatttagcggtatttcttagcgctannnnnnnnnnnnn |
107 |
Q |
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| T |
35925803 |
cttatgccagtagctaagctcaaataatgataattatctggttcctaaaaaattataagaacgatttagcggtatttcttagcgctattttttatttttt |
35925902 |
T |
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| Q |
108 |
n-caatgagtgctttctctaataacaatcagccaagcatgttcttttgcaggaagactaggacatcaaaagttgatcagttctatagtgctaggagttca |
206 |
Q |
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| T |
35925903 |
ttcaatgagcgctttctctaataacaatcagccaagcatgttcttttgcaggaagactagcacatcaaaagttgatcagttctatagtgctaggagttca |
35926002 |
T |
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| Q |
207 |
aaataagaggaaaactccgaaataaaaatgtaagttgggttcttaaatcttcagattttgtattttccattcaaataggaaac---ctctgtttcatatt |
303 |
Q |
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||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
35926003 |
aaataagaggagaactccaaaataaaaatgtaagttgggttcttaaatctccagattttgtattttccattcaaataggaaaccttctctgtttcatatt |
35926102 |
T |
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| Q |
304 |
gtatgattctggttcctatttcctattggggtggttctggttgtggtggtttaacttcatctatgaaatttgatccaaccatttttgttttcatttaaaa |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35926103 |
gtatgattctggttcctatttcctattggggtggttctggttgtggtggtttaacttcatctatgaaatttgatccaaccatttttgttttcatttaaaa |
35926202 |
T |
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| Q |
404 |
taaatgaaacggtttgt |
420 |
Q |
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| T |
35926203 |
taaatgaaacggtttgt |
35926219 |
T |
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