View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5792_low_8 (Length: 444)

Name: NF5792_low_8
Description: NF5792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5792_low_8
NF5792_low_8
[»] chr3 (44 HSPs)
chr3 (1-430)||(40880872-40881301)
chr3 (1-138)||(40904373-40904512)
chr3 (1-139)||(40899806-40899946)
chr3 (285-390)||(37273135-37273240)
chr3 (276-387)||(2175816-2175926)
chr3 (276-387)||(36646349-36646460)
chr3 (276-371)||(41724203-41724299)
chr3 (276-423)||(43115048-43115195)
chr3 (349-390)||(25182951-25182992)
chr3 (325-390)||(34707460-34707525)
chr3 (290-390)||(1809983-1810083)
chr3 (294-370)||(2152162-2152238)
chr3 (280-383)||(24281044-24281146)
chr3 (291-430)||(30923823-30923961)
chr3 (323-430)||(36200135-36200242)
chr3 (276-390)||(14548685-14548799)
chr3 (276-422)||(27792864-27793010)
chr3 (277-375)||(39602189-39602287)
chr3 (348-389)||(21574554-21574595)
chr3 (291-375)||(1217779-1217863)
chr3 (317-375)||(3015822-3015880)
chr3 (333-390)||(11039303-11039360)
chr3 (276-372)||(22214641-22214737)
chr3 (276-388)||(29113454-29113566)
chr3 (276-376)||(38462273-38462372)
chr3 (279-385)||(2719463-2719570)
chr3 (333-391)||(30750049-30750105)
chr3 (291-390)||(41452530-41452629)
chr3 (333-384)||(42817192-42817243)
chr3 (312-387)||(47132022-47132097)
chr3 (348-386)||(2606278-2606316)
chr3 (293-379)||(34414759-34414845)
chr3 (348-390)||(50015950-50015992)
chr3 (349-390)||(20194997-20195038)
chr3 (354-387)||(50211805-50211838)
chr3 (334-390)||(659824-659880)
chr3 (348-388)||(1395703-1395743)
chr3 (349-389)||(20170918-20170958)
chr3 (291-387)||(24624217-24624313)
chr3 (348-428)||(26330249-26330329)
chr3 (323-375)||(27290880-27290932)
chr3 (323-391)||(29771877-29771945)
chr3 (350-390)||(30443960-30444000)
chr3 (279-315)||(48323816-48323852)
[»] chr4 (42 HSPs)
chr4 (276-389)||(2996565-2996678)
chr4 (323-390)||(27123316-27123383)
chr4 (331-428)||(6428065-6428162)
chr4 (352-429)||(18628478-18628555)
chr4 (276-429)||(49219131-49219284)
chr4 (278-430)||(55870266-55870417)
chr4 (276-383)||(45128281-45128388)
chr4 (276-387)||(53315318-53315429)
chr4 (284-390)||(11264301-11264407)
chr4 (276-390)||(23819081-23819195)
chr4 (276-390)||(30207535-30207649)
chr4 (333-430)||(25583641-25583738)
chr4 (270-427)||(33534096-33534253)
chr4 (323-390)||(1965980-1966046)
chr4 (352-390)||(4071946-4071984)
chr4 (276-390)||(44319941-44320055)
chr4 (317-390)||(4691881-4691954)
chr4 (277-386)||(28300267-28300376)
chr4 (333-429)||(46090738-46090835)
chr4 (294-390)||(1137722-1137818)
chr4 (276-385)||(10192276-10192388)
chr4 (349-385)||(31642258-31642294)
chr4 (323-390)||(6987705-6987772)
chr4 (280-428)||(24370877-24371027)
chr4 (348-387)||(52419585-52419624)
chr4 (333-391)||(2841675-2841733)
chr4 (348-390)||(7368018-7368060)
chr4 (277-343)||(16494816-16494882)
chr4 (348-386)||(27725278-27725316)
chr4 (284-389)||(46415756-46415862)
chr4 (285-387)||(50742803-50742905)
chr4 (352-430)||(52428733-52428810)
chr4 (333-430)||(19304975-19305072)
chr4 (350-379)||(21683504-21683533)
chr4 (353-390)||(25904186-25904223)
chr4 (298-375)||(28614787-28614864)
chr4 (282-371)||(46110201-46110290)
chr4 (349-389)||(2236945-2236985)
chr4 (314-390)||(3176068-3176144)
chr4 (338-430)||(10365829-10365921)
chr4 (322-390)||(27721755-27721823)
chr4 (350-390)||(45622307-45622347)
[»] chr2 (54 HSPs)
chr2 (256-376)||(9556209-9556331)
chr2 (284-390)||(27699493-27699599)
chr2 (276-385)||(30552612-30552722)
chr2 (276-373)||(10285852-10285949)
chr2 (279-384)||(28933819-28933923)
chr2 (276-390)||(22681149-22681263)
chr2 (281-387)||(32821806-32821912)
chr2 (287-384)||(15120186-15120283)
chr2 (322-385)||(1494415-1494478)
chr2 (284-391)||(10567057-10567164)
chr2 (269-364)||(43141856-43141951)
chr2 (348-390)||(1318300-1318342)
chr2 (276-390)||(6993688-6993802)
chr2 (269-430)||(7103397-7103568)
chr2 (276-430)||(8017426-8017580)
chr2 (323-385)||(13220472-13220534)
chr2 (348-430)||(13866942-13867024)
chr2 (348-430)||(28803454-28803536)
chr2 (294-428)||(33192212-33192345)
chr2 (279-390)||(33942145-33942258)
chr2 (290-376)||(43065428-43065514)
chr2 (288-386)||(44606078-44606176)
chr2 (277-390)||(14316109-14316222)
chr2 (293-390)||(34652000-34652097)
chr2 (277-329)||(1899934-1899986)
chr2 (323-375)||(9878661-9878713)
chr2 (353-389)||(27317449-27317485)
chr2 (284-376)||(35810771-35810863)
chr2 (317-388)||(11063521-11063592)
chr2 (279-390)||(12313137-12313248)
chr2 (350-385)||(39622017-39622052)
chr2 (348-387)||(43808622-43808661)
chr2 (348-386)||(4550811-4550849)
chr2 (277-331)||(9477945-9477999)
chr2 (325-387)||(13234547-13234609)
chr2 (287-389)||(32106764-32106866)
chr2 (277-371)||(33941902-33941996)
chr2 (333-390)||(787381-787438)
chr2 (348-389)||(1741997-1742038)
chr2 (291-384)||(1939302-1939395)
chr2 (348-389)||(7862824-7862865)
chr2 (333-386)||(9478348-9478401)
chr2 (317-390)||(9996771-9996844)
chr2 (349-382)||(12140597-12140630)
chr2 (349-390)||(16451184-16451225)
chr2 (291-376)||(35378994-35379079)
chr2 (351-387)||(3973609-3973645)
chr2 (348-388)||(4350754-4350794)
chr2 (323-367)||(14451037-14451081)
chr2 (350-430)||(22878164-22878244)
chr2 (312-376)||(31096329-31096393)
chr2 (333-389)||(37474814-37474870)
chr2 (277-309)||(43199407-43199439)
chr2 (323-387)||(43456674-43456738)
[»] chr1 (64 HSPs)
chr1 (230-430)||(7217998-7218199)
chr1 (276-384)||(25005765-25005875)
chr1 (276-386)||(38867799-38867909)
chr1 (276-389)||(25479573-25479686)
chr1 (323-390)||(4868439-4868505)
chr1 (276-375)||(17420195-17420294)
chr1 (271-358)||(27887114-27887201)
chr1 (333-428)||(38170616-38170711)
chr1 (348-427)||(4757402-4757481)
chr1 (284-375)||(11639395-11639486)
chr1 (295-390)||(32515405-32515500)
chr1 (276-390)||(3224415-3224529)
chr1 (322-384)||(4548759-4548821)
chr1 (293-371)||(4699598-4699676)
chr1 (323-381)||(6262777-6262835)
chr1 (323-429)||(27140517-27140623)
chr1 (276-370)||(29045896-29045990)
chr1 (269-430)||(30257668-30257830)
chr1 (276-390)||(31517704-31517818)
chr1 (348-426)||(34536222-34536300)
chr1 (281-343)||(35351036-35351098)
chr1 (350-387)||(5591933-5591970)
chr1 (284-385)||(33185927-33186027)
chr1 (278-371)||(37842338-37842431)
chr1 (333-386)||(42336664-42336717)
chr1 (277-329)||(1432508-1432560)
chr1 (277-341)||(4700079-4700143)
chr1 (348-384)||(8780394-8780430)
chr1 (278-390)||(11695855-11695967)
chr1 (335-387)||(15579533-15579585)
chr1 (276-385)||(28689421-28689532)
chr1 (323-371)||(33108605-33108653)
chr1 (277-357)||(36151502-36151582)
chr1 (276-376)||(39270403-39270503)
chr1 (354-390)||(43371855-43371891)
chr1 (351-390)||(4033981-4034020)
chr1 (354-429)||(4200304-4200379)
chr1 (322-385)||(4481968-4482031)
chr1 (277-384)||(6279392-6279499)
chr1 (291-382)||(10744308-10744399)
chr1 (275-389)||(35668963-35669075)
chr1 (291-353)||(2522636-2522698)
chr1 (280-389)||(4549506-4549616)
chr1 (276-390)||(17269242-17269356)
chr1 (283-389)||(26779891-26779996)
chr1 (338-380)||(45234247-45234289)
chr1 (348-390)||(49692016-49692058)
chr1 (349-390)||(16980868-16980909)
chr1 (276-329)||(26946472-26946525)
chr1 (290-383)||(27963341-27963434)
chr1 (333-390)||(29929585-29929642)
chr1 (335-384)||(37941955-37942004)
chr1 (333-390)||(38001645-38001702)
chr1 (317-374)||(43722308-43722365)
chr1 (276-389)||(44422691-44422804)
chr1 (348-389)||(49521770-49521811)
chr1 (349-430)||(51929386-51929467)
chr1 (350-390)||(2295163-2295203)
chr1 (348-388)||(7356504-7356544)
chr1 (291-343)||(15558224-15558276)
chr1 (323-383)||(24153320-24153380)
chr1 (269-309)||(34179917-34179957)
chr1 (277-329)||(49888760-49888812)
chr1 (350-390)||(50644218-50644258)
[»] chr8 (41 HSPs)
chr8 (280-430)||(39551133-39551283)
chr8 (276-391)||(30389091-30389206)
chr8 (317-390)||(8629489-8629562)
chr8 (293-390)||(14949875-14949972)
chr8 (323-431)||(6950361-6950469)
chr8 (291-390)||(11569421-11569520)
chr8 (269-390)||(2091746-2091869)
chr8 (290-376)||(26473730-26473816)
chr8 (283-388)||(779027-779132)
chr8 (349-390)||(30918177-30918218)
chr8 (352-427)||(27412809-27412884)
chr8 (290-388)||(7918412-7918510)
chr8 (293-383)||(9540967-9541057)
chr8 (317-387)||(11770978-11771048)
chr8 (348-390)||(30987955-30987997)
chr8 (276-390)||(40071741-40071855)
chr8 (291-430)||(8060676-8060814)
chr8 (317-390)||(9700034-9700107)
chr8 (317-390)||(31875559-31875632)
chr8 (276-384)||(6509273-6509381)
chr8 (354-390)||(7918745-7918781)
chr8 (333-389)||(9572919-9572975)
chr8 (279-387)||(12851171-12851279)
chr8 (348-387)||(30191108-30191147)
chr8 (349-388)||(32840951-32840990)
chr8 (348-390)||(2487972-2488014)
chr8 (348-390)||(4251020-4251062)
chr8 (348-430)||(26479849-26479931)
chr8 (277-387)||(31862486-31862595)
chr8 (348-390)||(41442417-41442459)
chr8 (348-430)||(43368624-43368706)
chr8 (349-386)||(10120822-10120859)
chr8 (353-390)||(11056630-11056667)
chr8 (333-386)||(26371014-26371067)
chr8 (286-375)||(35220702-35220791)
chr8 (348-392)||(5069761-5069805)
chr8 (279-390)||(21130609-21130718)
chr8 (350-390)||(26771332-26771372)
chr8 (350-390)||(31915257-31915297)
chr8 (350-390)||(35534576-35534616)
chr8 (348-376)||(45071438-45071466)
[»] chr7 (54 HSPs)
chr7 (276-389)||(46082026-46082141)
chr7 (276-427)||(34754737-34754887)
chr7 (267-428)||(25670512-25670673)
chr7 (269-390)||(48157084-48157205)
chr7 (323-390)||(33894666-33894733)
chr7 (322-380)||(30496743-30496801)
chr7 (276-390)||(38010706-38010820)
chr7 (269-390)||(44151440-44151565)
chr7 (279-390)||(33645924-33646035)
chr7 (291-390)||(12242251-12242350)
chr7 (323-390)||(27626087-27626154)
chr7 (317-388)||(28727729-28727800)
chr7 (277-371)||(3610723-3610817)
chr7 (348-390)||(22387860-22387902)
chr7 (286-371)||(34035919-34036005)
chr7 (333-390)||(36537957-36538014)
chr7 (277-338)||(39907796-39907857)
chr7 (279-376)||(44615082-44615179)
chr7 (293-382)||(47427275-47427364)
chr7 (293-389)||(3468623-3468719)
chr7 (293-385)||(5276240-5276332)
chr7 (349-389)||(23214920-23214960)
chr7 (278-390)||(28691800-28691911)
chr7 (323-391)||(39360062-39360130)
chr7 (324-383)||(6857310-6857369)
chr7 (348-430)||(25422390-25422470)
chr7 (277-388)||(30535556-30535667)
chr7 (323-390)||(36598320-36598387)
chr7 (277-388)||(39542266-39542377)
chr7 (276-307)||(39711453-39711484)
chr7 (281-371)||(9038109-9038198)
chr7 (317-371)||(15740394-15740448)
chr7 (276-314)||(21453286-21453324)
chr7 (284-354)||(24363601-24363671)
chr7 (348-390)||(28340385-28340426)
chr7 (317-387)||(44808191-44808261)
chr7 (277-343)||(44821952-44822018)
chr7 (290-328)||(47046134-47046172)
chr7 (353-390)||(4970755-4970792)
chr7 (357-426)||(17942144-17942213)
chr7 (309-378)||(17983769-17983838)
chr7 (280-329)||(20881661-20881710)
chr7 (333-390)||(28844539-28844596)
chr7 (359-428)||(30748960-30749029)
chr7 (348-389)||(31003004-31003045)
chr7 (350-390)||(420427-420467)
chr7 (354-386)||(3804405-3804437)
chr7 (291-383)||(7244687-7244779)
chr7 (269-389)||(28165076-28165196)
chr7 (349-381)||(31149705-31149737)
chr7 (349-381)||(31167997-31168029)
chr7 (350-430)||(31751683-31751763)
chr7 (281-376)||(39967917-39968013)
chr7 (366-430)||(47041963-47042027)
[»] chr6 (53 HSPs)
chr6 (323-390)||(2460115-2460182)
chr6 (276-392)||(4006706-4006822)
chr6 (276-390)||(281812-281926)
chr6 (297-383)||(34939526-34939612)
chr6 (276-388)||(8035114-8035226)
chr6 (333-385)||(8348275-8348327)
chr6 (317-381)||(10616514-10616578)
chr6 (333-391)||(33500443-33500501)
chr6 (276-376)||(30523652-30523751)
chr6 (279-371)||(31624085-31624177)
chr6 (323-383)||(32577957-32578017)
chr6 (295-427)||(34939755-34939887)
chr6 (311-430)||(738465-738582)
chr6 (317-384)||(9027611-9027678)
chr6 (284-387)||(20368147-20368250)
chr6 (279-389)||(10476087-10476196)
chr6 (350-388)||(32171349-32171387)
chr6 (348-390)||(32917261-32917303)
chr6 (276-381)||(4246402-4246507)
chr6 (290-375)||(7931705-7931790)
chr6 (349-390)||(27857423-27857464)
chr6 (342-378)||(725631-725667)
chr6 (348-428)||(740812-740892)
chr6 (276-364)||(2112192-2112280)
chr6 (349-429)||(8146991-8147071)
chr6 (309-389)||(33832238-33832318)
chr6 (354-389)||(7485102-7485137)
chr6 (323-390)||(10031771-10031838)
chr6 (333-376)||(20377898-20377941)
chr6 (317-371)||(1575928-1575982)
chr6 (276-314)||(2727896-2727934)
chr6 (323-381)||(4080955-4081013)
chr6 (291-385)||(4324423-4324516)
chr6 (323-381)||(5566150-5566208)
chr6 (333-375)||(30863295-30863337)
chr6 (348-390)||(33116648-33116690)
chr6 (275-375)||(781371-781472)
chr6 (348-385)||(2263256-2263293)
chr6 (292-365)||(3528811-3528884)
chr6 (333-390)||(5731618-5731675)
chr6 (277-314)||(20671905-20671942)
chr6 (333-426)||(30865532-30865625)
chr6 (348-381)||(31338040-31338073)
chr6 (333-382)||(31594356-31594405)
chr6 (276-341)||(31671087-31671152)
chr6 (348-389)||(33498683-33498724)
chr6 (348-376)||(1669776-1669804)
chr6 (348-388)||(2027764-2027804)
chr6 (354-390)||(2455683-2455719)
chr6 (348-376)||(6310228-6310256)
chr6 (323-430)||(8420120-8420228)
chr6 (349-389)||(9559503-9559543)
chr6 (323-383)||(30604935-30604995)
[»] chr5 (50 HSPs)
chr5 (277-386)||(10272399-10272508)
chr5 (269-385)||(4619692-4619808)
chr5 (291-375)||(41957430-41957514)
chr5 (287-390)||(37611179-37611282)
chr5 (287-390)||(37787909-37788012)
chr5 (276-390)||(37526163-37526277)
chr5 (276-390)||(37588324-37588438)
chr5 (317-378)||(13604825-13604886)
chr5 (276-389)||(14295498-14295611)
chr5 (348-428)||(11297122-11297202)
chr5 (277-373)||(37794679-37794774)
chr5 (348-428)||(40159882-40159962)
chr5 (287-390)||(12242674-12242777)
chr5 (277-383)||(15246826-15246933)
chr5 (333-376)||(29363057-29363100)
chr5 (276-390)||(37690600-37690715)
chr5 (277-390)||(7674641-7674754)
chr5 (276-390)||(10391333-10391448)
chr5 (334-427)||(11457148-11457241)
chr5 (352-388)||(8090004-8090040)
chr5 (348-428)||(10125644-10125724)
chr5 (338-390)||(10152388-10152440)
chr5 (276-364)||(15003504-15003592)
chr5 (277-388)||(2568651-2568762)
chr5 (276-343)||(7319398-7319465)
chr5 (283-378)||(17368675-17368770)
chr5 (303-390)||(28586730-28586817)
chr5 (276-387)||(35960405-35960516)
chr5 (323-430)||(38728441-38728548)
chr5 (324-422)||(4273309-4273407)
chr5 (348-390)||(10907442-10907484)
chr5 (362-424)||(12407660-12407722)
chr5 (277-343)||(12425564-12425630)
chr5 (348-390)||(12459965-12460007)
chr5 (334-388)||(14980559-14980613)
chr5 (323-389)||(29590594-29590660)
chr5 (348-386)||(38047847-38047885)
chr5 (333-374)||(5531083-5531124)
chr5 (354-423)||(13244482-13244551)
chr5 (353-390)||(29336699-29336736)
chr5 (323-376)||(30269711-30269764)
chr5 (317-381)||(2092518-2092582)
chr5 (338-422)||(11095427-11095511)
chr5 (280-376)||(15402807-15402903)
chr5 (350-390)||(15905364-15905404)
chr5 (350-390)||(16457942-16457982)
chr5 (350-390)||(19113083-19113123)
chr5 (276-376)||(19369305-19369405)
chr5 (322-378)||(21768173-21768229)
chr5 (276-380)||(36542256-36542360)
[»] scaffold0311 (1 HSPs)
scaffold0311 (323-390)||(10581-10648)
[»] scaffold0459 (1 HSPs)
scaffold0459 (349-430)||(6611-6692)
[»] scaffold0366 (1 HSPs)
scaffold0366 (349-430)||(6609-6690)
[»] scaffold0608 (1 HSPs)
scaffold0608 (322-385)||(9606-9669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (290-389)||(306332-306431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (323-389)||(27615-27681)


Alignment Details
Target: chr3 (Bit Score: 410; Significance: 0; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 40881301 - 40880872
Alignment:
Q  1 aacagctccaagtccaaagatagcaacagaagaaccgggtttcggtttagcaacattgatggtagcaccaagacctacgaccatgaatgcaaattgaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40881301 aacagctccaagtccaaagatagcaacagaagaaccgggtttcggtttagcaacattgatggtagcaccaagacctaagaccatgaatgcaaattgaatt 40881202  T
Q  101 aggaaatcatatactcaacctagttatatattaatatctcaatgcaagcatatattatacactacttggataaacagcttaattaataagagtttacaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881201 aggaaatcatatactcaacctagttatatattaatatctcaatgcaaggatatattatacactacttggataaacagcttaattaataagagtttacaat 40881102  T
Q  201 ataatcacttatcatttaattacttactcataagctatttccataatgaaatataaaaataaagtcagtgtttcaatataagctataaattgttttcata 300  Q
    |||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881101 ataagcccttatcatttaagtacttactcataagctatttccataatgaaatataaaaataaagtcagtgtttcaatataagctataaattgttttcata 40881002  T
Q  301 aactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881001 aactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcat 40880902  T
Q  401 ttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||||||||||||||||||||||    
T  40880901 ttcaatagataagcttaaataagtcaatcc 40880872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 40904512 - 40904373
Alignment:
Q  1 aacagctccaagtccaaagatagcaacagaagaaccgggtttcggtttagcaacattgatggtagcaccaagacc--tacgaccatgaatgcaaattgaa 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||  |  ||| | ||||||||||    
T  40904512 aacagctccaagtccaaagatagcgacagaagaaccgggttttggtttagcaacattgatagtagcaccaagacctatagaagtatggaagcaaattgaa 40904413  T
Q  99 ttaggaaatcatatactcaacctagttatatattaatatc 138  Q
    ||| |||| |||| ||||| ||||||||||| ||||||||    
T  40904412 ttacgaaaacatagactcatcctagttatatgttaatatc 40904373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40899946 - 40899806
Alignment:
Q  1 aacagctccaagtccaaagatagcaacagaagaaccgggtttcggtttagcaacattgatggtagcaccaagacc--tacgaccatgaatgcaaattgaa 98  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||  ||  | |||| | ||||||||||    
T  40899946 aacagctccaaggccaaagatagcaacagatgaaccgggttttggtttagctacattgatagtagcaccaagacctgtaaaagcatggaagcaaattgaa 40899847  T
Q  99 ttaggaaatcatatactcaacctagttatatattaatatct 139  Q
    ||||  || |||| ||||| |||| |||||||| |||||||    
T  40899846 ttagagaaacatagactcagcctaattatatataaatatct 40899806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 37273135 - 37273240
Alignment:
Q  285 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    ||||| ||||||||||| ||||| | ||||| ||||  ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacag 37273234  T
Q  385 tctcac 390  Q
    ||||||    
T  37273235 tctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 387
Target Start/End: Complemental strand, 2175926 - 2175816
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||||||||| ||||||||| ||| ||||  ||||| ||| ||||| |||||| |||||   ||||||||||||||||||||||| || |    
T  2175926 atataagctataaattgttt-cataaactacccttgagagtttatagaaacaagttgaaaacagcttacaaacatgtcataagttgttttcataaactat 2175828  T
Q  376 ctcaaacagtct 387  Q
    |||||| |||||    
T  2175827 ctcaaatagtct 2175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 387
Target Start/End: Complemental strand, 36646460 - 36646349
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||| ||||| |||||||||||| ||||||||||||  ||||| ||||||| | |||||| |||| || |||| ||||||| |||| ||||||||||    
T  36646460 atataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctct 36646361  T
Q  376 ctcaaacagtct 387  Q
    | |||| |||||    
T  36646360 cccaaatagtct 36646349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 41724203 - 41724299
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttata-aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||||||||||||| ||||||||| | ||||||| ||||  ||||| |||||||| | ||||||||||| || ||||||||||||||||| ||||||    
T  41724203 atataagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataag 41724299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 423
Target Start/End: Original strand, 43115048 - 43115195
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| |||||||||| ||||||| | ||||  ||||  ||||||| | ||||||| ||| || ||||||||||||||||| ||||| ||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactct 43115147  T
Q  376 ctcaaacagtctcacgtatgttcatttcaatagataagcttaaataag 423  Q
      |||||| ||||||   || | || ||||||||||| |||| |||||    
T  43115148 tccaaacaatctcacaagtgattatgtcaatagataaccttatataag 43115195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 25182992 - 25182951
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25182992 atgtcataagttgttttcataagctctctcaaacagtctcac 25182951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 34707525 - 34707460
Alignment:
Q  325 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| ||||||||||| || ||||||| |||||||||||| ||| ||||||||||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcac 34707460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 390
Target Start/End: Original strand, 1809983 - 1810083
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    |||||||||||| ||||||||   || ||||| |||||||   ||||||||| | || ||||||||||||||||| | |||||||||||||| |||||||    
T  1809983 ttgttttcataagctatcctacgaaacttatagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctca 1810082  T
Q  390 c 390  Q
    |    
T  1810083 c 1810083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 2152238 - 2152162
Alignment:
Q  294 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 370  Q
    |||||||||||||||| ||||  ||||| ||| ||||| |||||| ||||||  |||||||||||||||||||||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataa 2152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 383
Target Start/End: Original strand, 24281044 - 24281146
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 379  Q
    |||||||||| |||| |||||  ||||| | ||||  |||| ||| |||||| ||||||||||| ||  || ||||||||||||||||||||||||||||    
T  24281044 aagctataaactgttgtcatag-ctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctca 24281142  T
Q  380 aaca 383  Q
    ||||    
T  24281143 aaca 24281146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 430
Target Start/End: Complemental strand, 30923961 - 30923823
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||||||||||  ||||| ||||||| | |||||| ||||  | ||||||||||| ||||| ||| |||||||  ||||||||||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcac 30923863  T
Q  391 gtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
       |||| || |||||| ||||||| || |||| ||||||    
T  30923862 aagtgtttatatcaataaataagctcaagtaaggcaatcc 30923823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 36200135 - 36200242
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    ||||||| | ||||||||||| || ||||||||||||||||| || || ||||||| |||| ||||||   || |  ||||| |||||||||| ||||||    
T  36200135 aaataagctgaaaacaacttatggacatgtcataagttgtttacaaaaactctctccaacattctcacaagtgctgttttcattagataagctcaaataa 36200234  T
Q  423 gtcaatcc 430  Q
    ||||||||    
T  36200235 gtcaatcc 36200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 14548799 - 14548685
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| | ||     |||||||| ||||||||||||||||||    
T  14548799 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctct 14548700  T
Q  376 ctcaaacagtctcac 390  Q
    |||||||||||||||    
T  14548699 ctcaaacagtctcac 14548685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 27792864 - 27793010
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||  || |||||||||||||||||| |  |||  ||||| ||||||| | |||||||||||      ||||| ||| | ||| ||||| ||||    
T  27792864 atataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagctgaaaacaacttataaatttgtcaaaagctatttccataaactct 27792963  T
Q  376 ctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
     |||||||||||||||| |||| || |||||||||||||| ||||||    
T  27792964 atcaaacagtctcacgtgtgtttatgtcaatagataagctcaaataa 27793010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 375
Target Start/End: Complemental strand, 39602287 - 39602189
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||| |||||  ||||||||||| ||||| | ||||| |||| |||||||||| ||||||| ||| |  ||||||||||| ||| ||||||||||||    
T  39602287 tataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctct 39602189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 21574554 - 21574595
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  21574554 catgtcataagttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 375
Target Start/End: Complemental strand, 1217863 - 1217779
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||| ||||||| ||||| |||| ||| |||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  1217863 tgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 1217779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 3015880 - 3015822
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||| |||||||| | |||||| |||| || ||||||||||||||||||||||||||||    
T  3015880 ttattaaaataagatgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 11039360 - 11039303
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| || ||||||||||  ||||| |||||||||| ||||||||||||||    
T  11039360 aaaacaacttatggacatgtcataatatgtttccataagctctttcaaacagtctcac 11039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 22214737 - 22214641
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagc 372  Q
    |||||| |||||| |||||||||||| ||||||||||||  |||   ||||||| | |||||| |||| || ||||||| | ||| |||||||||||    
T  22214737 atataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtcaaatgtttttttcataagc 22214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 388
Target Start/End: Original strand, 29113454 - 29113566
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||||| | ||||||| || ||||||| |  |||| |||||||  | |||| | ||||  | ||||| |||||||||||   ||||||||    
T  29113454 atataagctataaattttgttcataagctgtcctagaaagcttatgaaaataaaatgaaaatagcttataggcatgttataagttgtttctgtaagctct 29113553  T
Q  376 ctcaaacagtctc 388  Q
    |||||||||||||    
T  29113554 ctcaaacagtctc 29113566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 376
Target Start/End: Original strand, 38462273 - 38462372
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||| |||||||| ||||||||||| |||||| ||| |  ||||  ||||||| | ||||||||||| ||||| ||||||| ||||||  |||||||||    
T  38462273 atatatgctataaactgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatggtcaagtcataa-ttgtttgtataagctct 38462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 385
Target Start/End: Original strand, 2719463 - 2719570
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctct 377  Q
    ||||||||||| ||||||||||| ||||| | ||||| |||| |||||||| | | ||||||||| || | ||    |||||||||||| |||| |||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggacaatagtttaagttgttttcctaagttctct 2719562  T
Q  378 caaacagt 385  Q
    ||||||||    
T  2719563 caaacagt 2719570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 30750049 - 30750105
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 391  Q
    |||||| |||| || |||||||||||||||||||||  ||||||||||| |||||||||    
T  30750049 aaaacagcttatggacatgtcataagttgttttcat--gctctctcaaatagtctcacg 30750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 41452530 - 41452629
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||||| |||||||| |  ||||||| | |||||| ||||  | ||| |||||||||||||  ||||| ||||||||| | ||||||    
T  41452530 tgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgtttctataaggtctctcaaatactctcac 41452629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 42817243 - 42817192
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    ||||||||||| || ||||||||| | ||||| |||||||||||||||||||    
T  42817243 aaaacaacttatggacatgtcatatgctgtttccataagctctctcaaacag 42817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 47132022 - 47132097
Alignment:
Q  312 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    |||| ||||||||||||| | ||||||  ||| ||  ||| ||||||||||||||||||| ||||||||| |||||    
T  47132022 agaacttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaatagtct 47132097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 2606316 - 2606278
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  2606316 catgtcataagttgtttccataagatctctcaaacagtc 2606278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 379
Target Start/End: Complemental strand, 34414845 - 34414759
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 379  Q
    ||||||||||||||| | ||||  |||| |||||||| | ||||||||||| |  |||| ||||  |||||||||||||||| ||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 34414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 50015950 - 50015992
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  50015950 catgtcatacgttcttttcataagttctctcaaacagtctcac 50015992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 20195038 - 20194997
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||  ||||||||||||||||| |||||||||||||    
T  20195038 atgtcataaactgttttcataagctctcacaaacagtctcac 20194997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 387
Target Start/End: Original strand, 50211805 - 50211838
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtct 387  Q
    |||||||||||||||||| |||||||||||||||    
T  50211805 ataagttgttttcataagttctctcaaacagtct 50211838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 659880 - 659824
Alignment:
Q  334 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||| || ||||||||||| |||||  || ||||||| |||||||||||||    
T  659880 aaacaacttatggacatgtcataagctgtttctattagctctcacaaacagtctcac 659824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 1395703 - 1395743
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  1395703 catgtcttaagttgtttttgtaagctctctcaaacagtctc 1395743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 20170918 - 20170958
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||| |||||||||  ||||||||||||    
T  20170918 atgtcataagttgtttttataagctcttacaaacagtctca 20170958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 24624217 - 24624313
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||||  |||||||||| |  ||||   |||||| | ||||||  ||| || ||||||||||| ||||||||||||||||  ||||||||||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtct 24624313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 26330329 - 26330249
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||| ||||||||||||||||||||   ||||||||||||  ||  | |||||| ||||||| || |||||| |||||    
T  26330329 catgtcagaagttgttttcataagctcttctaaacagtctcacaaatacttatttcagtagataacctcaaataaatcaat 26330249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 27290932 - 27290880
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  27290932 aaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 29771877 - 29771945
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 391  Q
    ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||  ||| |||||||||    
T  29771877 aaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctcataaatagtctcacg 29771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 30443960 - 30444000
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  30443960 tgtcataagctgttttcataagctctaccaaacagtctcac 30444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 48323816 - 48323852
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaa 315  Q
    |||||||||||||||||||||||| |||| |||||||    
T  48323816 taagctataaattgttttcataaattatcatagagaa 48323852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 2996565 - 2996678
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||| ||||| |||||||||||| ||||| | ||||   ||| |||||||||| |||| | |||| || ||||||||||||||||||||||||||||    
T  2996565 atataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctct 2996664  T
Q  376 ctcaaacagtctca 389  Q
    ||||||||||||||    
T  2996665 ctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 27123383 - 27123316
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  27123383 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 27123316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 6428065 - 6428162
Alignment:
Q  331 ttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||| ||||||| || ||||||||||||||||||||||| ||||||||||| |||||||   || | ||  ||||| ||||||| ||||||||||||    
T  6428065 ttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatataagctcaaataagtcaat 6428162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 18628555 - 18628478
Alignment:
Q  352 tcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatc 429  Q
    ||||||||||||||||||||||||| |||||||||||||   |||| || ||| |||||||||| ||||| |||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaatacgtcaatc 18628478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 429
Target Start/End: Original strand, 49219131 - 49219284
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| |||||||||||||||||| || |||  ||||  ||||||| | ||||||||||| ||  |||  || | ||||||||||||| |||    
T  49219131 atataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatggagatgctattaattgttttcataaggtct 49219230  T
Q  376 ctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatc 429  Q
    |  ||||||| | | |  |  | |||||||||| ||||||||||||||||||||    
T  49219231 cctaaacagttttatgagtaattatttcaataggtaagcttaaataagtcaatc 49219284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 430
Target Start/End: Complemental strand, 55870417 - 55870266
Alignment:
Q  278 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 377  Q
    ||||||||||| |||||||||||| |||  | |||||  |||||| | ||| ||||||||| |||| || || |||||||  | |||||||||||| |||    
T  55870417 ataagctataagttgttttcataagctaatcaagagagcttataata-taattttaaaacagcttatggacaggtcataaacttttttcataagctatct 55870319  T
Q  378 caaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||| ||||||||  ||||| || ||| ||||||| || |||||||| |||||    
T  55870318 caaagagtctcacaaatgtttatgtcattagataaactcaaataagttaatcc 55870266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 45128388 - 45128281
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||||||||||||||||||| ||||| | |  ||||  ||||||| | |||||| || | || ||||  || |||||||| ||||||||||    
T  45128388 atataagctataaattgttttcataaactgtcctataaagcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctct 45128289  T
Q  376 ctcaaaca 383  Q
    ||||||||    
T  45128288 ctcaaaca 45128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 387
Target Start/End: Original strand, 53315318 - 53315429
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  |||| ||| |||| | ||||||||  |||| |||||||||| |||| | |||| || ||||| ||| ||||||||||||||||||    
T  53315318 atataagctataagctgttctcaaaaacaaacctagagagcttatgaaaataagttaaaaatagcttatggacatgtgatatgttgttttcataagctct 53315417  T
Q  376 ctcaaacagtct 387  Q
    | |||| |||||    
T  53315418 cacaaatagtct 53315429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 11264301 - 11264407
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||| |||||||||||| | ||||||||||  ||||  ||||||||| ||||||  ||| || |||||||||||||| ||  ||| |||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaaca 11264400  T
Q  384 gtctcac 390  Q
    |||||||    
T  11264401 gtctcac 11264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 23819081 - 23819195
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||| |||||  ||||||||||| ||||| |  |||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||||| ||| ||||    
T  23819081 atataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactct 23819180  T
Q  376 ctcaaacagtctcac 390  Q
      |||||||||||||    
T  23819181 tccaaacagtctcac 23819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 30207649 - 30207535
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| |||||||||||| ||| | ||||||  ||||  ||||||| | |||||| ||||| | ||||||||| | |||| | |||||||||    
T  30207649 atataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcatatgctgttcttataagctct 30207550  T
Q  376 ctcaaacagtctcac 390  Q
    ||| | |||||||||    
T  30207549 ctcgatcagtctcac 30207535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 430
Target Start/End: Original strand, 25583641 - 25583738
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||  || ||||||||||||||||| ||||||| ||| |||||||||||||  ||||| || |||  |||||| || |||||| |||||||    
T  25583641 aaaacaacttttggacatgtcataagttgtttgcataagcgctcccaaacagtctcacacatgtttatgtcagaagataaactcaaataaatcaatcc 25583738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 33534253 - 33534096
Alignment:
Q  270 gtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcata 369  Q
    ||||| |||||| ||| || |||||||| |||| |||  | ||||  |||| |||||||| | ||||||||||| ||  |||||| || |||||||||||    
T  33534253 gtttctatataatctacaagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcata 33534154  T
Q  370 agctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    |||||||||||| | ||||||   |  | || ||| |||||||||| |||||||||||    
T  33534153 agctctctcaaatactctcacaagtacttatgtcactagataagctcaaataagtcaa 33534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 1965980 - 1966046
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||| |||| |  ||||||||||||||||||||||||||| || ||||||||||||    
T  1965980 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagctc-ctaaaacagtctcac 1966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 4071946 - 4071984
Alignment:
Q  352 tcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  4071946 tcataagctgttttcataagctctctcaaacagtctcac 4071984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 44319941 - 44320055
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||| ||  | |||| |||| ||||||||||||| |||| ||||| |||| |||| | || | ||  |  |||||| |||||||||||||||||    
T  44319941 atataagctacaagctattttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctct 44320040  T
Q  376 ctcaaacagtctcac 390  Q
    | |||||||||||||    
T  44320041 cccaaacagtctcac 44320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 4691881 - 4691954
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||| | |||||||| || || ||||||||||||||||| |||||| | ||||||| ||||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataagttgtttccataagttttctcaaatagtctcac 4691954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 28300376 - 28300267
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||||| | ||||||||  ||||| |  |||  |||| |||||||||| ||||||||||| |  ||||||||| | |||||||||||  ||||    
T  28300376 tataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctc 28300277  T
Q  377 tcaaacagtc 386  Q
    |||| |||||    
T  28300276 tcaatcagtc 28300267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 429
Target Start/End: Complemental strand, 46090835 - 46090738
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttca-atagataagcttaaataagtcaatc 429  Q
    ||||||||| |||  |||||| |||| |||||||||||||| ||||| ||||||||||  ||||| || |||  |||||||| | |||||||||||||    
T  46090835 aaaacaactaacgaacatgtcttaagctgttttcataagctatctcatacagtctcacaaatgttaatgtcaggtagataagttcaaataagtcaatc 46090738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 1137722 - 1137818
Alignment:
Q  294 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||| |||||  ||||  ||||||  | ||||||||||| |  ||||||||||| |||||||||||| ||||  ||||||| ||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcac 1137818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 385
Target Start/End: Original strand, 10192276 - 10192388
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg----gtcatgtcataagttgttttcataag 371  Q
    ||||||| ||||| ||||||||| || ||||||| |||| | ||| |||||||||| |||||||||||||      ||||| ||||||| |||| |||||    
T  10192276 atataagttataagttgttttcaaaagctatcctggaga-gctatgaaaataagttgaaaacaacttacgaacatgcatgttataagttatttttataag 10192374  T
Q  372 ctctctcaaacagt 385  Q
     |||||||||||||    
T  10192375 ttctctcaaacagt 10192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 31642258 - 31642294
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagt 385  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31642258 atgtcataagttgttttcataagttctctcaaacagt 31642294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 6987772 - 6987705
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||| |  ||| || ||||||||||||||| | ||||||||||| |||||||||||||    
T  6987772 aaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcac 6987705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 428
Target Start/End: Complemental strand, 24371027 - 24370877
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggt--catgtcataagttgttttcataagctctct 377  Q
    ||||||||| |||||||||||| |||||||| | |  ||||| ||||||| | |||||  |||| |    ||||||||||||||||| |||||| | | |    
T  24371027 aagctataagttgttttcataagctatcctaaatagtttatagaaataagctgaaaacggcttatgtatacatgtcataagttgtttccataagttttat 24370928  T
Q  378 caaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    |||||| |||||| | || | ||   |||||||||||| ||||||||||||    
T  24370927 caaacattctcacatgtgcttatgcgaatagataagctcaaataagtcaat 24370877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 52419624 - 52419585
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  52419624 catgtaataagttgttttcataaggtctctcaaacagtct 52419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 2841675 - 2841733
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 391  Q
    |||||||||||  | |||||||||||||| |||||||| ||||| |||||| |||||||    
T  2841675 aaaacaacttattgacatgtcataagttgctttcataaactctcgcaaacaatctcacg 2841733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 7368060 - 7368018
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||    
T  7368060 catgtcataagctgttttcatgagctctcccaaacagtctcac 7368018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 16494882 - 16494816
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    |||||||||||| |||||||||||| ||||| | ||||  || ||||| |||||| |||||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaacaactta 16494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 27725278 - 27725316
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  27725278 catgtcataagttatttccataagctctctcaaacagtc 27725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 46415862 - 46415756
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc-aaac 382  Q
    ||||| || ||||||||| ||||||| ||||  |||  ||||| || | ||||||||||| || ||||||||| ||||||| ||||| ||||| | ||||    
T  46415862 tataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgtttgcataaactctcccaaaac 46415763  T
Q  383 agtctca 389  Q
    |||||||    
T  46415762 agtctca 46415756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 50742905 - 50742803
Alignment:
Q  285 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    |||| |||||||||||| ||||||| ||||  |||| ||||| |||| ||||||   || |  |||||||| |  |||||||||||| ||||||||||||    
T  50742905 ataacttgttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 50742806  T
Q  385 tct 387  Q
    |||    
T  50742805 tct 50742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 52428733 - 52428810
Alignment:
Q  352 tcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||||||||||||||||||||||||||| ||| |||   ||| |  ||||| ||||||| || ||||||||||||||    
T  52428733 tcataagttgttttcataagctctctcaaatagtttcagacatg-tgttttcagtagataaactcaaataagtcaatcc 52428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 430
Target Start/End: Original strand, 19304975 - 19305072
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||| || ||||||||||| ||||| || ||  |||| || ||| ||||||  ||| | || ||||||||||| || ||||||||||||||    
T  19304975 aaaacaacttatggacatgtcataagctgtttccacaaattctcccacacaatctcacaaatgcttatgtcaatagataatctcaaataagtcaatcc 19305072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 379
Target Start/End: Complemental strand, 21683533 - 21683504
Alignment:
Q  350 tgtcataagttgttttcataagctctctca 379  Q
    ||||||||||||||||||||||||||||||    
T  21683533 tgtcataagttgttttcataagctctctca 21683504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 25904223 - 25904186
Alignment:
Q  353 cataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  25904223 cataagctgttttcataagctctcccaaacagtctcac 25904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 375
Target Start/End: Complemental strand, 28614864 - 28614787
Alignment:
Q  298 ataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||| ||||||||||||| |||| |||||||| | |||| | |||| ||  ||||||||| |||||| ||||||||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 46110201 - 46110290
Alignment:
Q  282 gctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||||||| ||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| |   || ||||||||||||||||||||    
T  46110201 gctataaactgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataag 46110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 2236985 - 2236945
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  2236985 atgtgataagttgttttcataagttatctcaaacagtctca 2236945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 3176144 - 3176068
Alignment:
Q  314 aagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||  ||||||| | |||||||||||  | |||| |||||| |||||||||||||||||  ||||||| ||||    
T  3176144 aagttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagtttcac 3176068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 10365829 - 10365921
Alignment:
Q  338 aacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||| || ||||| |||| ||||||  ||||||| ||||||| |||||| |   |||| || ||| |||||||| ||||||||||||||||    
T  10365829 aacttatggacatgttataatttgtttcgataagctgtctcaaatagtctctccagtgtttatgtcagtagataagattaaataagtcaatcc 10365921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 27721755 - 27721823
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||| | |||||| |||| ||  ||||||||||| ||||| ||||||||||| ||||| ||||||    
T  27721755 aaaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctcttaaacaatctcac 27721823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 45622307 - 45622347
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||||||| |||| | |||||||||||    
T  45622307 tgtcataagttgttttcataagttctcccgaacagtctcac 45622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 376
Target Start/End: Original strand, 9556209 - 9556331
Alignment:
Q  256 aaaataaagtca--gtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 353  Q
    ||||||||||||  ||||||  ||| |||||||||| ||||||||||| |||||||||| |  |||| |||||||||| ||| | ||||| || ||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtc 9556308  T
Q  354 ataagttgttttcataagctctc 376  Q
    || ||||||||||||||||||||    
T  9556309 attagttgttttcataagctctc 9556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 27699599 - 27699493
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||| |||||||||||||||||| | |||||   ||  ||||||| | |||||| | |  ||| |||||||||||||||||||||| ||||||||||||    
T  27699599 tataagttgttttcataaactatcatggagaatcgatggaaataagctgaaaacagcatgtggtgatgtcataagttgttttcataaactctctcaaaca 27699500  T
Q  384 gtctcac 390  Q
    |||||||    
T  27699499 gtctcac 27699493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 385
Target Start/End: Complemental strand, 30552722 - 30552612
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaa-caacttacggtcatgtcataagttgttttcataagctc 374  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||  ||||||| | |||| |||||||  | |||||||||||||||||  |||| ||     
T  30552722 atatcagctataaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgtttcgataaccta 30552623  T
Q  375 tctcaaacagt 385  Q
    |||||||||||    
T  30552622 tctcaaacagt 30552612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 373
Target Start/End: Original strand, 10285852 - 10285949
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||||||||| | |||| ||||| ||| | ||||||| ||||  ||||||||| |||||| |||| || ||||||||||||| ||||||||||||    
T  10285852 atataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataagct 10285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 384
Target Start/End: Original strand, 28933819 - 28933923
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||| |||||||||||||||||| ||||||||||||  | ||| ||||||||| |||||| | || |  |||| |||||||||||||||||||||||  |    
T  28933819 taagttataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc-tatgaacatgccataagttgttttcataagctcttcc 28933917  T
Q  379 aaacag 384  Q
    ||||||    
T  28933918 aaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 22681263 - 22681149
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  22681263 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 22681164  T
Q  376 ctcaaacagtctcac 390  Q
    |||||||| ||||||    
T  22681163 ctcaaacattctcac 22681149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 32821806 - 32821912
Alignment:
Q  281 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 380  Q
    ||||||||| ||||||||||| |||||||| |||  ||||| ||||||  | |||||| |||| || |||||||||||||||||  |||| ||||  |||    
T  32821806 agctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaa 32821905  T
Q  381 acagtct 387  Q
    |||||||    
T  32821906 acagtct 32821912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 384
Target Start/End: Original strand, 15120186 - 15120283
Alignment:
Q  287 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    ||||||||||| ||| ||||| | ||||  |||| |||||||| |||||||| || | |  ||||||||||||||||| ||||||||||| |||||||    
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacag 15120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 1494478 - 1494415
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    |||||||| | ||||||  ||| || ||||||||||| ||||||||||||||||||||||||||    
T  1494478 aaaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaacagt 1494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 10567057 - 10567164
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    |||||| ||||| |||||||||| || ||||  || | ||||| || | ||||||||||| | |||||||||||| ||||| || || ||||| ||||||    
T  10567057 tataaactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaaca 10567156  T
Q  384 gtctcacg 391  Q
    ||||||||    
T  10567157 gtctcacg 10567164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 43141856 - 43141951
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 364  Q
    |||||| |||||||||||||  ||||||||||| |||||||  |||  ||||  ||||||  | ||||||||||| || |||||||||||||||||    
T  43141856 tgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgttt 43141951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 1318300 - 1318342
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  1318300 catgtcataagatgttttcataagctctcacaaacagtctcac 1318342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 6993802 - 6993688
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||  |||||||||||| |||| || ||||  |||| |||||||| | ||||  ||||| || |||| |||||| | ||| |||||| |||    
T  6993802 atataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggacatgccataagctatttacataagttct 6993703  T
Q  376 ctcaaacagtctcac 390  Q
     ||||||||||||||    
T  6993702 atcaaacagtctcac 6993688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 430
Target Start/End: Complemental strand, 7103568 - 7103397
Alignment:
Q  269 tgtttcaatataagctataaattgtttt-cataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcata------agttg 361  Q
    ||||| ||||||||||||||  |||||| ||||| ||||| ||||||  || | |||||||| | ||||||||||| ||  ||||||||      |||||    
T  7103568 tgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatggatatgtcatactcataagttg 7103469  T
Q  362 ttttcata---agctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||| ||||   ||||||| |||||| |||||| | || |||| ||||||||||| || ||||||||||||||    
T  7103468 tttacatacatagctctcccaaacaatctcacatgtgctcatgtcaatagataaactcaaataagtcaatcc 7103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 430
Target Start/End: Original strand, 8017426 - 8017580
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||| |||| ||||||||||| ||||| | ||||| |||| |||||| |   ||||||| ||| |  ||| ||||||| |||||||||||| |||    
T  8017426 atataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttct 8017525  T
Q  376 ctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    | |||| | || |||   || | || ||||||||||| || ||||||||||||||    
T  8017526 cccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatcc 8017580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 13220472 - 13220534
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    |||||||||||||||| |||| |  || ||||||||||||||| ||||| |||||||||||||    
T  13220472 aaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctctcaaacagt 13220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 13866942 - 13867024
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||   |||| ||  || |||||||||| ||||| ||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatcc 13867024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 28803536 - 28803454
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||||||||| |||| | |||||||||||||||||| | || | ||  |  |||||||||| ||||||||||||||    
T  28803536 catgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatcc 28803454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 428
Target Start/End: Original strand, 33192212 - 33192345
Alignment:
Q  294 tttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgta 393  Q
    |||||||| ||||||| ||||  ||||||| ||||| | |||||| |||| ||  |||||||||  |||||||||||| ||| ||||||||||||| |      
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct-tcaaacagtctcatgag 33192310  T
Q  394 tgttcatttcaatagataagcttaaataagtcaat 428  Q
    |||| || |||  ||||||||| ||||||| ||||    
T  33192311 tgtttatgtcagcagataagctcaaataagccaat 33192345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 390
Target Start/End: Original strand, 33942145 - 33942258
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt--cataagctctc 376  Q
    |||||||||| |||||||||||| | ||| ||||||  | || ||||| || | |||||| |||| |  ||||||||||||||| |   |||||||||||    
T  33942145 taagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgtctctccataagctctc 33942244  T
Q  377 tcaaacagtctcac 390  Q
    ||||||||||||||    
T  33942245 tcaaacagtctcac 33942258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 43065514 - 43065428
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||||  |||| | ||||  ||||  ||||||| | ||||||| ||| || |||||||||||||||||||||||||||||    
T  43065514 ttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 386
Target Start/End: Complemental strand, 44606176 - 44606078
Alignment:
Q  288 aattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||  ||| ||| |  | |||| ||||| || | ||||||||||| || |||||||||||||||||||||||| |||  |||||||||    
T  44606176 aattgttttcataagttattctaaaacacttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 390
Target Start/End: Complemental strand, 14316222 - 14316109
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||||||| ||||||||  | ||| | |||||| |||| ||||||| | |||||| ||||     |||||||||||||||| |||||||||||    
T  14316222 tataagctataaattattttcatatgcaatctttgagaagctatagaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctc 14316123  T
Q  377 tcaaacagtctcac 390  Q
      ||| ||||||||    
T  14316122 caaaatagtctcac 14316109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 34652097 - 34652000
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| ||||| | ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||||  ||||||| |||| ||| |||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagctttctccaaccgtctcac 34652000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 1899934 - 1899986
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 329  Q
    ||||||||||||| |||||||||||||||| ||| |||  |||||||||||||    
T  1899934 tataagctataaaatgttttcataaactattctaaagagtttataaaaataag 1899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 9878713 - 9878661
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||  ||||||||||| || ||||||||||||||||| ||||||||||    
T  9878713 aaataagtcgaaaacaacttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 27317449 - 27317485
Alignment:
Q  353 cataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctca 27317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 35810863 - 35810771
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||| ||||||||||||  ||||||||||||| |||| ||| |||| | |||| |||||| || || | ||||||||||||  ||||||||||    
T  35810863 tatatattgttttcatacgctatcctagagaacttatgaaagtaagctaaaaataacttatggccaggccataagttgtttctataagctctc 35810771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 388
Target Start/End: Original strand, 11063521 - 11063592
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||| |||||||| | ||||||||||| || ||||||||||  ||||| ||||||||||  |||||||||||    
T  11063521 ttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaacagtctc 11063592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 12313248 - 12313137
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    ||||||| ||||||||| ||||| ||||| | ||||  |||| |||||||| | ||| ||||||| |  |||| |||||| |||||||||||  |||| |    
T  12313248 taagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctccc 12313149  T
Q  379 aaacagtctcac 390  Q
    ||||| ||||||    
T  12313148 aaacaatctcac 12313137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 39622017 - 39622052
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagt 385  Q
    |||||||||||||||||||||| |||||||||||||    
T  39622017 tgtcataagttgttttcataagttctctcaaacagt 39622052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 43808622 - 43808661
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  43808622 catgtcataagttattttcataagctctctcaaatagtct 43808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 4550811 - 4550849
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  4550811 catgtcataagttgtttccataagctctcccaaacagtc 4550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 9477945 - 9477999
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtt 331  Q
    |||||| ||||| |||||||||||| ||||||| |||| ||||| ||||||||||    
T  9477945 tataagttataagttgttttcataagctatcctggagaggttatgaaaataagtt 9477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 13234547 - 13234609
Alignment:
Q  325 ataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||| ||||||||||| || ||||||||||  ||||||  ||||| ||||||||||||||    
T  13234547 ataagttgaaaacaacttatggacatgtcataatgtgtttttgtaagcactctcaaacagtct 13234609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 32106866 - 32106764
Alignment:
Q  287 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    |||||| ||||||||  ||||||  |||  |||| || |||| || |||||| ||||| |  |||||||||| |||||||||||| |||| |||||||||    
T  32106866 aaattgctttcataagttatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtc 32106767  T
Q  387 tca 389  Q
    |||    
T  32106766 tca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 371
Target Start/End: Original strand, 33941902 - 33941996
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||||| ||||| |||||||||||| ||||| | ||||  |||| | |||||||| ||| || |||| |  | ||||||||||||||||||||||    
T  33941902 tataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataag 33941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 787381 - 787438
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||| |||| || ||||||||||| |||||||||||| |||| |||||||| ||||    
T  787381 aaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcac 787438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 1742038 - 1741997
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  1742038 catgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 1939395 - 1939302
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    ||||||||||| |||| || ||||  ||||  ||||||||| |||||| |||| || |||||||||||||||| | | || |||||| ||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttattacaatctctctaaaacag 1939302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 7862824 - 7862865
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||    
T  7862824 catgttataagttgttttcgtaagctctctcgaacagtctca 7862865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 9478348 - 9478401
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    |||||| |||| || ||||| ||||||||||| ||||| |||||||||||||||    
T  9478348 aaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtc 9478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 9996771 - 9996844
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||||| | ||||| ||| ||  ||||||||||||||||  |||||||||| ||| |||||||||    
T  9996771 ttatgaaaataagttgagaacaatttatgggtatgtcataagttgtttctataagctctcccaagcagtctcac 9996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 12140597 - 12140630
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaac 382  Q
    ||||||||||||||||||||||| ||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaac 12140630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 16451184 - 16451225
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  16451184 atgtcataagttgttttcataagttctcccaaacggtctcac 16451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 376
Target Start/End: Complemental strand, 35379079 - 35378994
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||| ||||| | ||||  |||| |||||||| | ||||||||||| |  || ||||| || |||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 3973609 - 3973645
Alignment:
Q  351 gtcataagttgttttcataagctctctcaaacagtct 387  Q
    |||||||||||||| |||| |||||||||||||||||    
T  3973609 gtcataagttgtttccatatgctctctcaaacagtct 3973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 4350754 - 4350794
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    ||||||||||| |||||||||||| ||||||||||| ||||    
T  4350754 catgtcataagctgttttcataagttctctcaaacaatctc 4350794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 14451081 - 14451037
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttca 367  Q
    ||||||| | |||||| |||| |||||||||||||||||||||||    
T  14451081 aaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 22878164 - 22878244
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||||| |||||| |||||| |||| |||||||||||||   || | || ||| | |||||||| ||||||||||||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatcc 22878244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 31096329 - 31096393
Alignment:
Q  312 agaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||| |||| ||||||||||||||||| |||| || ||||| || |  |||||||||||||||||    
T  31096329 agaacttatgaaaataagtttaaaacagcttatggacatgttattaactgttttcataagctctc 31096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 37474814 - 37474870
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||| | || ||| ||| |||| ||||||||||||||||||||| |||||||    
T  37474814 aaaacaactaatggacatatcacaagtagttttcataagctctctcaaagagtctca 37474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 43199407 - 43199439
Alignment:
Q  277 tataagctataaattgttttcataaactatcct 309  Q
    |||||||||||| ||||||||||||||||||||    
T  43199407 tataagctataagttgttttcataaactatcct 43199439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 387
Target Start/End: Complemental strand, 43456738 - 43456674
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||| | ||||||  ||| || |||||||| ||||||||||| ||||||| |||||||||||    
T  43456738 aaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtct 43456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 430
Target Start/End: Complemental strand, 7218199 - 7217998
Alignment:
Q  230 ataagctatttccataatgaaatataaaaataaagtcag--tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaata 327  Q
    |||| ||||||||||||| |||  ||||| ||||||||   |||||  ||||||||||||| |||||||||||| ||||||| ||||| |||| ||||||    
T  7218199 ataatctatttccataataaaaggtaaaa-taaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaata 7218101  T
Q  328 agtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    |||| |||||| |||  |  | |||||||||| ||||||| |||||| | |||||| |||||    |||| ||  |  ||||||||||||||||||||||    
T  7218100 agttgaaaacagcttgtgaacgtgtcataagtcgttttcacaagctcccccaaacaatctcagaagtgtttatgccggtagataagcttaaataagtcaa 7218001  T
Q  428 tcc 430  Q
    |||    
T  7218000 tcc 7217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 25005875 - 25005765
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggt--catgtcataagttgttttcataagct 373  Q
    ||||||||||||| |||||||||||| ||||||| ||||  ||||||||| ||| |||||| | |||||  |   | |||||||||||||||||||||||    
T  25005875 atataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatcttactatagaaagtcataagttgttttcataagct 25005776  T
Q  374 ctctcaaacag 384  Q
    ||| |||||||    
T  25005775 ctcccaaacag 25005765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 386
Target Start/End: Complemental strand, 38867909 - 38867799
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||| |||| |||||||||||  |||| |  |||| |||| |||||||| | ||||||||| | || ||| ||||||||| ||| ||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagttatttccataagctct 38867810  T
Q  376 ctcaaacagtc 386  Q
    |||||||||||    
T  38867809 ctcaaacagtc 38867799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 25479573 - 25479686
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||| ||||||| |||||||||||| ||||||||||||  |||| |||||||| | ||||||||| | |  ||||||||||  | |||||||||||||     
T  25479573 atataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataagctca 25479672  T
Q  376 ctcaaacagtctca 389  Q
    | |||| |||||||    
T  25479673 cacaaatagtctca 25479686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 4868439 - 4868505
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||  | |||||||||||||| |||||||| |||||||||||||||||||    
T  4868439 aaataagttgaaaacaacttattgacatgtcataagttg-tttcataaactctctcaaacagtctcac 4868505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 17420195 - 17420294
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||| ||||||| ||| |||||  ||| || | ||  ||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||    
T  17420195 atataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctct 17420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 27887201 - 27887114
Alignment:
Q  271 tttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataag 358  Q
    |||| ||||||||||||| |||||||||||||||||| | ||||   |||||||||||| | ||||||| ||| || |||||||||||    
T  27887201 tttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 428
Target Start/End: Complemental strand, 38170711 - 38170616
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||| ||| |||||||||   |||||||  || || ||||| ||||||||||||||    
T  38170711 aaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcacaagtgttcatgccagtatataaggttaaataagtcaat 38170616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 4757402 - 4757481
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    |||||||||||||||||||||||| |||  ||||  |||||||   |||| || |||||||||||||| |||||||||||    
T  4757402 catgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaa 4757481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 11639486 - 11639395
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||| ||||| |||||  ||| |||||||  |||| |||||||| | |||||| |||| || ||||||||||| ||||||||||||||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctct 11639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 32515500 - 32515405
Alignment:
Q  295 ttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| ||||| | ||||  ||||| | ||||||| |||||||||||  | ||||||||| | ||||| ||||||||||| |||||||||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcac 32515405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 3224415 - 3224529
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||   |||||| |||| |||| |||||||| |||| |||||||| | | ||||||||| || |||||||||||| ||||  ||||  |||    
T  3224415 atataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattct 3224514  T
Q  376 ctcaaacagtctcac 390  Q
    |||||| ||| ||||    
T  3224515 ctcaaatagtgtcac 3224529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 4548759 - 4548821
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    |||||||| | |||||||||||| | ||||||||||||||||| ||| || ||||||||||||    
T  4548759 aaaataagctaaaaacaacttacaggcatgtcataagttgtttccattaggtctctcaaacag 4548821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 4699676 - 4699598
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    ||||||||||||||||  ||||  ||||| ||||||| | |||||| |||| |  ||||||||||||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataag 4699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 6262777 - 6262835
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 381  Q
    ||||||| ||||||||||||| || ||| ||||||||| ||||||||||||||| ||||    
T  6262777 aaataagcttaaaacaacttatggacatatcataagttattttcataagctctcccaaa 6262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 27140517 - 27140623
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    ||||||| | ||||||||||| || ||||||||||| ||||| | ||| |||||||||| || || ||   |||| || |||||||||||||| | ||||    
T  27140517 aaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttacaattgtttatgtcaatagataagctcatataa 27140616  T
Q  423 gtcaatc 429  Q
    |||||||    
T  27140617 gtcaatc 27140623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 370
Target Start/End: Complemental strand, 29045990 - 29045896
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataa 370  Q
    ||||||||||||| |||||||||||| || |||| ||||  | ||  || || ||| ||| ||||||| || |||||||||||||||||||||||    
T  29045990 atataagctataagttgttttcataagctgtcctggagagatgatggaagtacgttaaaagcaacttatggacatgtcataagttgttttcataa 29045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 430
Target Start/End: Original strand, 30257668 - 30257830
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 368  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||   ||||| ||||||| | |||||| |||| |  ||||||||||    |||| ||    
T  30257668 tgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataaaagatttttat 30257767  T
Q  369 aagctctctcaaacagtctcac-gtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||  ||| ||||||||   ||||| || ||| ||||||| || |||||||| |||||    
T  30257768 aagctctcctaaatagtctcacaaaatgtttatgtcagtagataaactcaaataagtaaatcc 30257830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 31517818 - 31517704
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||| ||||||| || || | ||||  |||| |||||||| | |||||| |||| |  |||||||| ||||||||| ||||| |||    
T  31517818 atataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttct 31517719  T
Q  376 ctcaaacagtctcac 390  Q
    | |||||||||||||    
T  31517718 cccaaacagtctcac 31517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 34536222 - 34536300
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtca 426  Q
    ||||||||||| |||||||||||||  ||||||||||||||||   |||| || |||||||||| | | ||||||||||    
T  34536222 catgtcataagctgttttcataagccatctcaaacagtctcacaagtgtttatgtcaatagatacgttcaaataagtca 34536300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 35351036 - 35351098
Alignment:
Q  281 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    |||||||| |||| ||||||||||||||||||||  ||| ||||||||| | |||||||||||    
T  35351036 agctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaactta 35351098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 5591970 - 5591933
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5591970 tgtcataagctgttttcataagctctctcaaacagtct 5591933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 33186027 - 33185927
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||| ||||||| |||| ||||||||||||  | ||  ||||||||| ||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||    
T  33186027 tataagttgtttttataagctatcctagagatat-atgtaaataagttgaaaacaggttatggaaatgtcataatttgttttcataaactctctcaaaca 33185929  T
Q  384 gt 385  Q
    ||    
T  33185928 gt 33185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 37842431 - 37842338
Alignment:
Q  278 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    ||||||||||| |||||||||||| ||||| |  |||| ||||||||||||| | |||||  |||| |  |||||||| || ||||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataag 37842338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 42336664 - 42336717
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||  || |||||||||||||||||||||||| | ||||||||||||    
T  42336664 aaaacaacttttggacatgtcataagttgttttcataagttatctcaaacagtc 42336717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 1432508 - 1432560
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 329  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||| ||||    
T  1432508 tataagctataaattgttttcataaactatcttggagaacttatgaaagtaag 1432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 4700143 - 4700079
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 341  Q
    ||||||||||||| |||||| |||||||||||| ||||  |||| |||||||| | |||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 8780430 - 8780394
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacag 384  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8780430 catgtcataagttgtttttataagctctctcaaacag 8780394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 390
Target Start/End: Original strand, 11695855 - 11695967
Alignment:
Q  278 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 377  Q
    |||||||||||| |||||| ||| ||||| || || |  |||| |||||||||| |||||| |||| || ||||||||||  ||||| |||| ||| ||     
T  11695855 ataagctataaaatgtttttatagactattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccatatgctttcc 11695954  T
Q  378 caaacagtctcac 390  Q
    |||||| ||||||    
T  11695955 caaacaatctcac 11695967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 15579533 - 15579585
Alignment:
Q  335 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||| || ||||||||||||||||| || |||||||| ||||||||||    
T  15579533 aacaacttatggacatgtcataagttgtttccacaagctctcccaaacagtct 15579585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 385
Target Start/End: Complemental strand, 28689532 - 28689421
Alignment:
Q  276 atataagctataaattgttttcataaa--ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||||||||| ||||||||||| |  ||||| | || |  |||| |||||||| | ||||||||||| || ||||||||||| ||||| | |||| |    
T  28689532 atataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagtt 28689433  T
Q  374 ctctcaaacagt 385  Q
    |||| |||||||    
T  28689432 ctctaaaacagt 28689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 33108653 - 33108605
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  33108653 aaataagttgaaaacaacttatggtcatggcatgagttgttttcataag 33108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 36151582 - 36151502
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataa 357  Q
    |||||| |||||||||||||| ||||| ||||||| ||  |||| |||||||||| ||||||  ||| || ||||||||||    
T  36151582 tataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataagttgaaaacaggttatggacatgtcataa 36151502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 39270503 - 39270403
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||| |||||  ||||||||||| ||| | ||||||   ||| |||||||||| |||||| |||| || |||| || ||| ||||||||||||||||    
T  39270503 atataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctct 39270404  T
Q  376 c 376  Q
    |    
T  39270403 c 39270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 43371891 - 43371855
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcac 43371855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 4034020 - 4033981
Alignment:
Q  351 gtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4034020 gtcataagttattttcataagctctctcaaacaatctcac 4033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 429
Target Start/End: Original strand, 4200304 - 4200379
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatc 429  Q
    ||||||||||||||| ||||||| |||||||||||||  ||| | || ||| || |||| || |||||||||||||    
T  4200304 ataagttgttttcattagctctcacaaacagtctcacaaatgcttatatcagtatataaactaaaataagtcaatc 4200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 4481968 - 4482031
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  4481968 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 6279392 - 6279499
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||||| |||| | ||||||||| ||||||||||||  ||||  ||||| | | ||||||||||| || |||||  | |  ||||| |||||||||||    
T  6279392 tataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctc 6279491  T
Q  377 tcaaacag 384  Q
    ||||||||    
T  6279492 tcaaacag 6279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 10744308 - 10744399
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 382  Q
    ||||||||||| || || ||||||| ||||||||||||| | |||||| |||| |  |||| |||||| |||||||| ||| |||| |||||    
T  10744308 tgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaaac 10744399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 389
Target Start/End: Original strand, 35668963 - 35669075
Alignment:
Q  275 aatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 374  Q
    ||||||| ||||||| |||||||||||  ||||||  | || ||||  ||||||||| ||||||| ||| || ||| ||||||| || |||||||||       
T  35668963 aatataaactataaactgttttcataacttatcctgtaaaatttatggaaataagttgaaaacaatttatggacatatcataagctgctttcataag--t 35669060  T
Q  375 tctcaaacagtctca 389  Q
    |||||||||||||||    
T  35669061 tctcaaacagtctca 35669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 2522636 - 2522698
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtc 353  Q
    |||||||||||||||| || ||||| ||||  ||||||||| ||||||| |||||| ||||||    
T  2522636 tgttttcataaactattctggagaatttatggaaataagttgaaaacaaattacggacatgtc 2522698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 389
Target Start/End: Complemental strand, 4549616 - 4549506
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactt-acggtcatgtcataagttgttttcataagctctctc 378  Q
    |||||||||  ||||||||||| | ||||| ||||  ||||  ||||  ||| |||||||||| |  | |||||||||||||||||  |||||||||| |    
T  4549616 aagctataagatgttttcataagcaatcctggagagcttattgaaatttgttgaaaacaactttatagacatgtcataagttgtttctataagctctccc 4549517  T
Q  379 aaacagtctca 389  Q
    |||||||||||    
T  4549516 aaacagtctca 4549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 17269242 - 17269356
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||| |||| |||||||||||| ||||||| ||||  |||    |||||||| ||||||||| | |  ||||||||||| | ||||||||||| ||    
T  17269242 atataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcact 17269341  T
Q  376 ctcaaacagtctcac 390  Q
      |||||| ||||||    
T  17269342 accaaacaatctcac 17269356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 26779996 - 26779891
Alignment:
Q  283 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 382  Q
    |||||| |||||||||||| ||||| |  |||| |||| |||||||||| |||||||||||  ||   |||||||| |||||||| ||  |||| |||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactta-tgtacggtcataaggtgttttcagaaattctcccaaac 26779898  T
Q  383 agtctca 389  Q
    |||||||    
T  26779897 agtctca 26779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 45234247 - 45234289
Alignment:
Q  338 aacttacggtcatgtcataagttgttttcataagctctctcaa 380  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  45234247 aacttaagggcatgtcataagttgttttcataaactctctcaa 45234289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 49692058 - 49692016
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| | |||||||||| ||||||||||||||||||    
T  49692058 catgtcataagctattttcataagttctctcaaacagtctcac 49692016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 16980868 - 16980909
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    
T  16980868 atgtcgtaagttgtttccataagctctctcaaatagtctcac 16980909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 26946525 - 26946472
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataag 329  Q
    ||||||||||||| | |||||||||| ||||| ||||||||| || ||||||||    
T  26946525 atataagctataagtcgttttcataagctatcttagagaagtcatgaaaataag 26946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 383
Target Start/End: Complemental strand, 27963434 - 27963341
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    |||||||||||| ||||  | ||||  ||||| ||||||| | ||||||||||| || ||||||||||| ||||   ||||||| |||||||||    
T  27963434 ttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgttaatataagctttctcaaaca 27963341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 29929642 - 29929585
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| |  |||||||| ||||||||||||||||||||  ||||||| ||||    
T  29929642 aaaacaacttatgcacatgtcatgagttgttttcataagctctccaaaacagtatcac 29929585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 37942004 - 37941955
Alignment:
Q  335 aacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    ||||||||| || |||||||||| ||||||  ||||||||||||||||||    
T  37942004 aacaacttatggacatgtcataaattgtttctataagctctctcaaacag 37941955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 38001645 - 38001702
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| |  || |||||||| |||||||||||| |||| |||||||||||||    
T  38001645 aaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctcac 38001702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 43722365 - 43722308
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 374  Q
    ||||||||||||| | |||||||| || |  ||||||||||||| |||||||||||||    
T  43722365 ttataaaaataagctgaaaacaacataagaacatgtcataagtttttttcataagctc 43722308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 44422691 - 44422804
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  | |||| |||| ||||||| ||||  |||| |||||||| |  |  || |||| || ||||||||||| | ||||||||||||||    
T  44422691 atataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctct 44422790  T
Q  376 ctcaaacagtctca 389  Q
    | || |||||||||    
T  44422791 cccagacagtctca 44422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 49521811 - 49521770
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||| || ||||||||||||||| |||||    
T  49521811 catgtcataagttgtttccacaagctctctcaaacaatctca 49521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 430
Target Start/End: Complemental strand, 51929467 - 51929386
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||||||| |||||||||||| ||||| ||||||| ||||   || | || ||| |||||||||| ||| ||||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatcc 51929386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 2295163 - 2295203
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctcac 2295203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 7356544 - 7356504
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  7356544 catgtcataagttgtttttataaactctctcaaacaatctc 7356504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 15558224 - 15558276
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    |||||||||||  |||||||||||| ||||| ||||||| | |||||||||||    
T  15558224 tgttttcataagatatcctagagaacttatagaaataagctgaaaacaactta 15558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 24153320 - 24153380
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||||||| ||||||||| | ||  ||||||||||||||||  |||||||||| ||||||    
T  24153320 aaataagttaaaaacaactcatggatatgtcataagttgtttctataagctctcacaaaca 24153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 34179957 - 34179917
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcct 309  Q
    ||||| ||| ||||||||||| |||||||||||||||||||    
T  34179957 tgttttaatctaagctataaactgttttcataaactatcct 34179917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 49888760 - 49888812
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataag 329  Q
    |||||||||| | |||||||||||| ||||| ||||||| |||| ||||||||    
T  49888760 tataagctattagttgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 50644258 - 50644218
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  50644258 tgtcgtaagttgttttcataagttctcccaaacagtctcac 50644218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 430
Target Start/End: Complemental strand, 39551283 - 39551133
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 379  Q
    ||||||||| |||||||||||| || |||| ||||  ||||||||||||||| |||||| |||  || ||||||||||||||||| |||||  |||| ||    
T  39551283 aagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctccca 39551184  T
Q  380 aacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||| ||||  ||| | || ||  ||||||| || ||||||||||||||    
T  39551183 aacagtttcacaaatgcttatatccgtagataatctcaaataagtcaatcc 39551133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 391
Target Start/End: Original strand, 30389091 - 30389206
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||   ||||||||||| || |||||||||| |||| |||||||| | ||||||||||| |  |||||||| || | |||||||| |||||    
T  30389091 atataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctct 30389190  T
Q  376 ctcaaacagtctcacg 391  Q
    |||||||||| |||||    
T  30389191 ctcaaacagtgtcacg 30389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 8629489 - 8629562
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| | ||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||    
T  8629489 ttataaatagaagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctcac 8629562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 14949875 - 14949972
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||| |||  ||||| ||||||| | |||||| |||| || ||||||||||||| |||||||||||||||  ||||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcac 14949972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 431
Target Start/End: Original strand, 6950361 - 6950469
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    ||||||| | |||||||||||  | ||||||||| ||||||| ||||||||||| |||||| ||||||  ||||| ||  || ||||||| || ||||||    
T  6950361 aaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataa 6950460  T
Q  423 gtcaatcct 431  Q
    |||||||||    
T  6950461 gtcaatcct 6950469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 11569520 - 11569421
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||| | ||||  || | |||||||| | ||||||||||| |  ||||||||||| ||||| |||||||||||| ||||||||||||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcac 11569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 390
Target Start/End: Original strand, 2091746 - 2091869
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagt---tataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 365  Q
    ||||| ||||||||||| || |||||||||||| ||||||| | ||||    |||| ||||||||| ||||||||||| ||  || ||||||||||||||    
T  2091746 tgttttaatataagctacaagttgttttcataagctatcct-gtgaagagcatatagaaataagttgaaaacaacttatggatatatcataagttgtttt 2091844  T
Q  366 cataagctctctcaaacagtctcac 390  Q
      | |||||||||||||| ||||||    
T  2091845 tgtgagctctctcaaacaatctcac 2091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 26473816 - 26473730
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||||||||| ||||||||||||  |||| |||||||||| |||  | ||||  | ||||||||||| |||||||||||||||||    
T  26473816 ttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataagctctc 26473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 779132 - 779027
Alignment:
Q  283 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 382  Q
    ||||||| ||||||||||||||||| | ||||   ||  |||||||| | ||||||||||| |  ||||||||||||||||||| |||| ||| ||||||    
T  779132 ctataaactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaagttctttcaaac 779033  T
Q  383 agtctc 388  Q
    | ||||    
T  779032 aatctc 779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 30918177 - 30918218
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30918177 atgtcacaagttgttttcataagctctctcaaacagtctcac 30918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 27412884 - 27412809
Alignment:
Q  352 tcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    |||||||||||||||||||||||||||||| ||| |||   ||||  |||||| || ||||||| |||||||||||    
T  27412884 tcataagttgttttcataagctctctcaaatagtttcagacatgtgtatttcagtatataagctcaaataagtcaa 27412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 388
Target Start/End: Complemental strand, 7918510 - 7918412
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||||| ||| ||||| | ||||  ||||  |||||||||  ||||| |||| |  |||||| |||||||||||||||||||||| |||||||||||    
T  7918510 ttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 9541057 - 9540967
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||||||| ||||||||||||  || | |||||||| | || |||| ||| || ||||||||||| ||||| ||||||||||| ||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaaca 9540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 11771048 - 11770978
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||||||||| |||||||| ||  | ||| |||||||||||||||||||| ||| | |||||||||    
T  11771048 ttataaaaataagttgaaaacaacgtatagacatatcataagttgttttcataagttcttttaaacagtct 11770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 30987997 - 30987955
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  30987997 catgtcataagttgtttccataagctctctcaaacagactcac 30987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 40071741 - 40071855
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||| |||||||| |||||||| || |||||||||| |  |||| ||||| |||| ||| |   ||| |  ||||||||||||||||| ||||||||||    
T  40071741 atatatgctataaactgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataagctct 40071840  T
Q  376 ctcaaacagtctcac 390  Q
    | |||||| ||||||    
T  40071841 cccaaacactctcac 40071855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 430
Target Start/End: Original strand, 8060676 - 8060814
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc-a 389  Q
    ||||||||||| | ||||||||||  ||||  ||||||| | |||| |||||| |  | |  ||||| ||||||||||||||||||||||||||| || |    
T  8060676 tgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaactttccataatttgttttcataagctctctcaaacagtttcga 8060775  T
Q  390 cgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
     |  |||| || |||||||||| ||| ||||||||||||||    
T  8060776 ag--tgtttatgtcaatagatatgctcaaataagtcaatcc 8060814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 9700034 - 9700107
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||| | |||||| |||| || |||||||||| ||| ||||| ||||||||||||| ||||||||    
T  9700034 ttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcac 9700107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 31875632 - 31875559
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||||| ||||   |||| || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  31875632 ttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagtgtcac 31875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 6509381 - 6509273
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||||||||||| ||||||| ||||  ||||  ||||||| | |||| |  |||  | ||||||||||| |||||  |||||||||    
T  6509381 atataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctct 6509282  T
Q  376 ctcaaacag 384  Q
    |||||||||    
T  6509281 ctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 7918781 - 7918745
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcac 7918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 9572919 - 9572975
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||| || ||||||||||||| ||||| |||| |||| ||||||||||||    
T  9572919 aaaacaacttatggacatgtcataagttattttcgtaagttctcacaaacagtctca 9572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 12851171 - 12851279
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    ||||||| ||||||||||||||| || |||| ||||  |||| ||||||||   |||||| |||| |  ||||| ||||| |||||||||||| | || |    
T  12851171 taagctagaaattgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttccc 12851270  T
Q  379 aaacagtct 387  Q
    |||||||||    
T  12851271 aaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 30191147 - 30191108
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtct 387  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  30191147 catgtcataagttgtttccataagctctcccaaacagtct 30191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 388
Target Start/End: Complemental strand, 32840990 - 32840951
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  32840990 atgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 2488014 - 2487972
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  2488014 catgttataagttgttttcataagttctcccaaacagtctcac 2487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 4251020 - 4251062
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||  |||||||||| |||||||||||||||||||    
T  4251020 catgtcataagcagttttcataaactctctcaaacagtctcac 4251062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 26479849 - 26479931
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||| |||||||||||| ||||||||||| |||| ||| ||||   |  |  | |||||||||||||||||||||||||||||    
T  26479849 catgacataagttgtttccataagctctcgcaaatagtttcacaagtccttgtgtcaatagataagcttaaataagtcaatcc 26479931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 31862486 - 31862595
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||||  |||||||||||  |||||||||||  |||| |||||||| | |||||| |||| |   | ||||||||||| || | ||| |||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttgcttccgtaa-ctctc 31862584  T
Q  377 tcaaacagtct 387  Q
    |||||||||||    
T  31862585 tcaaacagtct 31862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 41442459 - 41442417
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  41442459 catgtcataaattgttttcataagttctgtcaaacagtctcac 41442417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 43368706 - 43368624
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    |||||||||||||||||||||||||| |  ||| |||||||||  ||| | || | | |||||||| | ||||||||||||||    
T  43368706 catgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagataagatcaaataagtcaatcc 43368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 386
Target Start/End: Original strand, 10120822 - 10120859
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtc 386  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  10120822 atgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 11056667 - 11056630
Alignment:
Q  353 cataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  11056667 cataagttgttttcataaactctctcaaacaatctcac 11056630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 26371014 - 26371067
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||| |||  |||||||||||| |||| |||||| ||||||||||||||    
T  26371014 aaaacaactgacgcacatgtcataagtagtttccataagatctctcaaacagtc 26371067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 35220791 - 35220702
Alignment:
Q  286 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||| ||||||||||| |||| || ||||  ||||||||||||| | |||| | |||| || ||||||||||  ||||||||||| ||||    
T  35220791 taaactgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgtcataaactgttttcataaactct 35220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 5069761 - 5069805
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgt 392  Q
    ||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  5069761 catgttataagatgtttccataagctctctcaaacagtcttacgt 5069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 390
Target Start/End: Original strand, 21130609 - 21130718
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||| ||||| ||||| |||||||||||| | ||||  ||||  ||||||| | |||||| | |  || ||||||| ||| | ||| |||||||||||||    
T  21130609 taagatataagttgttctcataaactatcattgagagcttatggaaataagctcaaaacagcat--ggacatgtcaaaagctatttccataagctctctc 21130706  T
Q  379 aaacagtctcac 390  Q
    ||||||||||||    
T  21130707 aaacagtctcac 21130718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 26771332 - 26771372
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  26771332 tgtcataagctgttttcataagttctcccaaacagtctcac 26771372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 31915297 - 31915257
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  31915297 tgtcataagttgtttgtataagctttctcaaacagtctcac 31915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 35534616 - 35534576
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcac 35534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 45071438 - 45071466
Alignment:
Q  348 catgtcataagttgttttcataagctctc 376  Q
    |||||||||||||||||||||||||||||    
T  45071438 catgtcataagttgttttcataagctctc 45071466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 46082026 - 46082141
Alignment:
Q  276 atataagctataaattgttttcataaac--tatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||| ||||| ||||||||||| ||  ||| || ||||  |||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46082026 atataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagct 46082125  T
Q  374 ctctcaaacagtctca 389  Q
    |||   ||||||||||    
T  46082126 ctcattaacagtctca 46082141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 427
Target Start/End: Complemental strand, 34754887 - 34754737
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||  ||| |||||||||||||||||||| ||||  | ||  ||||||| | |||||||||||  | | ||||||||| ||||||| ||||||||    
T  34754887 atataagccgtaagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttataggcttgtcataagatgttttcttaagctct 34754789  T
Q  376 ctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    ||||||||||||||    ||||  | |||||||||||||| ||| |||||||    
T  34754788 ctcaaacagtctcataagtgtttgtgtcaatagataagctcaaacaagtcaa 34754737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 428
Target Start/End: Complemental strand, 25670673 - 25670512
Alignment:
Q  267 agtgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttc 366  Q
    |||||||  ||||||||||| ||||||||| ||||  |||| | ||||  || | |||||||| | ||||||| |||    |||||||||||||||||||    
T  25670673 agtgttttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttc 25670574  T
Q  367 ataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||| | ||||||||||||||||    | | || |||||||||||||| || |||||||||    
T  25670573 ataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagtaagtcaat 25670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 390
Target Start/End: Complemental strand, 48157205 - 48157084
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 368  Q
    ||||| |||||||||||||| ||||||||| || |||| |  ||||  ||||  ||||||| | |||||| |||| || |||| ||||||||||||  ||    
T  48157205 tgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctat 48157106  T
Q  369 aagctctctcaaacagtctcac 390  Q
    |||||||| |||||||||||||    
T  48157105 aagctctcccaaacagtctcac 48157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 33894666 - 33894733
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| | ||||||||||| || ||||||||| | ||||||||||||||||| |||||||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcac 33894733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 30496743 - 30496801
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaa 380  Q
    |||||||| | |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  30496743 aaaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctctcaa 30496801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 38010706 - 38010820
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||||||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |  ||||| ||  |||||||||||||   ||    
T  38010706 atataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgttgttttcataaaaact 38010805  T
Q  376 ctcaaacagtctcac 390  Q
    |||||||| ||||||    
T  38010806 ctcaaacattctcac 38010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 390
Target Start/End: Complemental strand, 44151565 - 44151440
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaag-ttataaaaataagtttaaaacaacttacggtcatgtcat----aagttgtt 363  Q
    |||||| ||||||||||||| ||||||||||||||||| || || ||| ||||  ||||||| | |||||| |||| || ||||||||    || |||||    
T  44151565 tgtttccatataagctataagttgttttcataaactat-cttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataaaaaaattgtt 44151467  T
Q  364 ttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||| | ||||||    
T  44151466 ttcataagctctctcaaataatctcac 44151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 33646035 - 33645924
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct- 377  Q
    ||||||||||| ||||||||||| ||||| | ||||  ||||  ||||||  | |||||||||||  | ||||||||||||||||| ||||||||||||     
T  33646035 taagctataaactgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctctc 33645937  T
Q  378 caaacagtctcac 390  Q
    ||| |||||||||    
T  33645936 caaccagtctcac 33645924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 12242251 - 12242350
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||| ||||| |||||| || ||  |||| ||||||| | |||||||||||  | ||| |||||||  |||| |||||||||||||||||||||||||    
T  12242251 tgttttaataaattatcctggacaacgtatagaaataagctgaaaacaacttataggcatatcataagccgtttgcataagctctctcaaacagtctcac 12242350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 27626154 - 27626087
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||  ||| || ||||||||||| ||||| |||||||| ||||||||| ||||||    
T  27626154 aaataagtttaaaacagtttatggacatgtcataagctgtttccataagctttctcaaacaatctcac 27626087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 28727800 - 28727729
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    ||||| ||||||| | |||||||| ||||  |||||||||||  |||| |||||||||||||||||||||||    
T  28727800 ttatagaaataagctgaaaacaacatacgaacatgtcataagccgtttccataagctctctcaaacagtctc 28727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 3610817 - 3610723
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||||||||||| |||||||| ||||||||||||||||  ||||| ||||||| | ||||   |||| || |||||||| || ||||| ||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttccataag 3610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 22387902 - 22387860
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  22387902 catgccataagttgttttcataagctctcccaaacagtctcac 22387860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 34035919 - 34036005
Alignment:
Q  286 taaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataag 371  Q
    |||||||||||||||| ||||| ||||||| ||   |||||||||| ||||||||||| |  | |||||||||||| ||||||||||    
T  34035919 taaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataag 34036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 36537957 - 36538014
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||| ||||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcac 36538014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 39907796 - 39907857
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaaca 338  Q
    ||||||||||||| ||||||||||||||||| ||||||| | || |||||||| | ||||||    
T  39907796 tataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaaca 39907857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 44615179 - 44615082
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||| |||||||||||  || ||| ||||  ||||  ||||||  | |||||| |||  || |||||||||||||||||||||||||||||    
T  44615179 taagctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctc 44615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 47427364 - 47427275
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 382  Q
    |||||||||||||| || ||||  ||| ||||||||| || ||| | ||||  |  |||||||||||||||| |||||||||||||||||    
T  47427364 ttttcataaactattcttgagagtttaaaaaaataagcttgaaatagcttatagagatgtcataagttgtttccataagctctctcaaac 47427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 3468623 - 3468719
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||| ||||||||||||| || |  |||||||||  |||||||||| || |||||||| |||||||| ||  | |||||  |||||||||||    
T  3468623 ttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgtttccaacaactctccgaaacagtctca 3468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 5276240 - 5276332
Alignment:
Q  293 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    ||||||||| ||||||| || || | || |||||||| | ||||||||| | |   |||||||||| ||||| ||||||||||||||||||||    
T  5276240 ttttcataagctatcctggaaaactaatgaaaataaggtgaaaacaactaatgaagatgtcataagatgtttgcataagctctctcaaacagt 5276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 23214920 - 23214960
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctca 23214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 390
Target Start/End: Complemental strand, 28691911 - 28691800
Alignment:
Q  278 ataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctct 377  Q
    ||||| |||| ||||||||||||| ||||||| ||||  |||| |||||||  | | ||||| ||| || || |||||||| |||||||||||| ||||     
T  28691911 ataagttatacattgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctc- 28691813  T
Q  378 caaacagtctcac 390  Q
    | |||||||||||    
T  28691812 cgaacagtctcac 28691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 39360062 - 39360130
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 391  Q
    ||||||| | ||| ||||||| ||  |||||||||||||||| ||||| |||| |||||||||||||||    
T  39360062 aaataagctgaaagcaacttatggatatgtcataagttgtttccataaactctatcaaacagtctcacg 39360130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 6857369 - 6857310
Alignment:
Q  324 aataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    |||||||| ||||||||||| || |||| |||||| ||||| ||||||||||||| ||||    
T  6857369 aataagttgaaaacaacttatggacatggcataagctgtttccataagctctctcgaaca 6857310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 25422390 - 25422470
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||    |||| ||  ||||  ||||||||||||||||||||||    
T  25422390 catgtcataaggtgtttccataagctctcccaaacagtctcagtggtgttaatgccaat--ataagcttaaataagtcaatcc 25422470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 30535556 - 30535667
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||| ||||||  ||||| ||||| ||||| || ||||  ||| |||||||  | |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  30535556 tataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctc 30535655  T
Q  377 tcaaacagtctc 388  Q
      ||||||||||    
T  30535656 caaaacagtctc 30535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 36598387 - 36598320
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| | |||||| |||| |  ||||||||||| ||||| |||||||||||||||||| ||||||    
T  36598387 aaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcac 36598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 39542377 - 39542266
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||| ||||| |||||| |||||  |||||| ||||  |||| |||||||||||   | |||| || | ||||||||||||| ||| |||||||||||    
T  39542377 tataagatataagttgtttccataagttatcctggagagcttatgaaaataagtttgttaaaactgacagacatgtcataagttatttccataagctctc 39542278  T
Q  377 tcaaacagtctc 388  Q
    | |||| |||||    
T  39542277 taaaactgtctc 39542266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 307
Target Start/End: Complemental strand, 39711484 - 39711453
Alignment:
Q  276 atataagctataaattgttttcataaactatc 307  Q
    ||||||||||||||||||||||||||||||||    
T  39711484 atataagctataaattgttttcataaactatc 39711453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 371
Target Start/End: Original strand, 9038109 - 9038198
Alignment:
Q  281 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    ||||||||| ||||||||||||||||| | ||||| || | |||||||| | ||||||| ||| |  ||||||||||| |||||| |||||    
T  9038109 agctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgtttttataag 9038198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 15740448 - 15740394
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 15740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 21453286 - 21453324
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagaga 314  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  21453286 atataagctataaactgttttcataagctatcctagaga 21453324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 24363671 - 24363601
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtca 354  Q
    ||||| |||||||||||| ||||||| |||| |||||  ||||||| | ||||||||||| || |||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 28340426 - 28340385
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  28340426 catgtcataagttgttttcataagctctc-ccaacagtctcac 28340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 44808191 - 44808261
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtct 387  Q
    |||| |||||||| | ||||||  ||| || ||||||||||||| |||||||||| ||| |||||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtct 44808261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 44821952 - 44822018
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    |||||| |||||  ||||||||||| |||| || ||||| |||| |||||||||| |||||||||||    
T  44821952 tataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaactta 44822018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 47046172 - 47046134
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataa 328  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47046172 ttgttttcataagctatcctagagaaattataaaaataa 47046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 4970792 - 4970755
Alignment:
Q  353 cataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcac 4970755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 426
Target Start/End: Original strand, 17942144 - 17942213
Alignment:
Q  357 agttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtca 426  Q
    ||||||||||||||| ||||||| ||||||||||   |||| ||| || |||||||||| ||| ||||||    
T  17942144 agttgttttcataagttctctcagacagtctcacaggtgtttattgcagtagataagctcaaacaagtca 17942213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 378
Target Start/End: Original strand, 17983769 - 17983838
Alignment:
Q  309 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    ||||||| ||||  |||||||||||||||||||||||| ||| |||||| | |||| ||| | |||||||    
T  17983769 tagagaacttattgaaataagtttaaaacaacttacggacatatcataaatcgtttccatcaactctctc 17983838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 20881710 - 20881661
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataag 329  Q
    ||||||||| |||||||||||||||||| || |||| |||| ||||||||    
T  20881710 aagctataagttgttttcataaactatcttaaagaacttatgaaaataag 20881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 28844539 - 28844596
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| | || |||||||||||||||||||| ||||||||  ||||||| ||||    
T  28844539 aaaacaactgatggacatgtcataagttgttttcagaagctctcctaaacagtatcac 28844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 30749029 - 30748960
Alignment:
Q  359 ttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||||||||| |||||||||||||||||| |  | | || ||| |||||||||| |||||| |||||    
T  30749029 ttgttttcataagttctctcaaacagtctcacattggcttatgtcagtagataagctcaaataactcaat 30748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 31003004 - 31003045
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  31003004 catgtcataagttgtttttataaactttctcaaacagtctca 31003045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 420427 - 420467
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||| ||||||||||||| |||| |||||||||||||    
T  420427 tgtcataaattgttttcataagttctcccaaacagtctcac 420467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 386
Target Start/End: Original strand, 3804405 - 3804437
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||||| |||||||||||||||    
T  3804405 ataagttgttttcataaactctctcaaacagtc 3804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 7244687 - 7244779
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||||||||| ||||  | ||||  |||| |||||||| | ||||||||||| |  |||||||||| |||||| ||| |||||| |||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaaca 7244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 28165076 - 28165196
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 368  Q
    ||||| ||||||||||||||| ||| || |||| ||||| | ||||  ||||  ||||||||| |||||| |||| |  || ||| | || ||||| |||    
T  28165076 tgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccat 28165175  T
Q  369 aagctctctcaaacagtctca 389  Q
    ||||| ||||||| |||||||    
T  28165176 aagctatctcaaagagtctca 28165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 31149705 - 31149737
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaa 381  Q
    |||||||||||| ||||||||||||||||||||    
T  31149705 atgtcataagttattttcataagctctctcaaa 31149737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 31167997 - 31168029
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaa 381  Q
    |||||||||||| ||||||||||||||||||||    
T  31167997 atgtcataagttattttcataagctctctcaaa 31168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 31751763 - 31751683
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||||||| ||||||||||   ||||||||||||  ||| | || | | || ||||| ||||||||||||||||    
T  31751763 tgtcataagttgtttccataagctcttataaacagtctcacaaatgcttatgtgactacataagtttaaataagtcaatcc 31751683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 376
Target Start/End: Original strand, 39967917 - 39968013
Alignment:
Q  281 agctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtc-atgtcataagttgttttcataagctctc 376  Q
    |||||||| |||||||||||| |||||  |||||| | || |||||||||| |||||| |||| |  | ||| |||||| |||||||||||| ||||    
T  39967917 agctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 47042027 - 47041963
Alignment:
Q  366 cataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||||| |||| ||||||||   |||| || |||||||||| ||| ||||||||||||||    
T  47042027 cataagctctcacaaaaagtctcacaagtgttaatgtcaatagatatgctcaaataagtcaatcc 47041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 2460182 - 2460115
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||    
T  2460182 aaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcac 2460115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 392
Target Start/End: Original strand, 4006706 - 4006822
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| |||||||||||| ||||||  |||| ||||| |||||||| | |||| |||||| || ||| || ||||||||||||| |||||||    
T  4006706 atataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagttgttttcacaagctct 4006805  T
Q  376 ctcaaacagtctcacgt 392  Q
      |||| ||| ||||||    
T  4006806 tccaaagagtttcacgt 4006822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 281926 - 281812
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||| ||||||| ||||||||||||  | ||  ||||||| | |||||||||||  | |||||||||||||| || ||| ||||||    
T  281926 atataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctct 281827  T
Q  376 ctcaaacagtctcac 390  Q
    | |||||||||||||    
T  281826 cccaaacagtctcac 281812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 34939526 - 34939612
Alignment:
Q  297 cataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||| |||||||  ||| |||||  ||||||| | |||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaaca 34939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 388
Target Start/End: Complemental strand, 8035226 - 8035114
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||| || ||||||||||||  ||||||||| |  |||  |||||||||| ||||||| ||| |  ||||||||||||||||||| |||| |||    
T  8035226 atataagctagaagttgttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttct 8035127  T
Q  376 ctcaaacagtctc 388  Q
    | |||| ||||||    
T  8035126 cccaaatagtctc 8035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 8348275 - 8348327
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  8348275 aaaacaacttatggtcatgttataagttgttttcgtaagctctctcaaacagt 8348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 10616578 - 10616514
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 381  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  10616578 ttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 33500501 - 33500443
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacg 391  Q
    ||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||||||    
T  33500501 aaaacaacttatgcacatgtcataaattgttttcataagctccctcaaacagtctcacg 33500443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 376
Target Start/End: Original strand, 30523652 - 30523751
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| || ||||||||| ||||||| |||| |||||| |||| |||| |||||| |||| |  |||| |||||||||||| |||||| |||    
T  30523652 atataagctataagtt-ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatct 30523750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 31624085 - 31624177
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    ||||||||||  ||||||||||  ||||| | ||||| |||| |||||||||| |||||| |||| |  ||||||||||| ||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataag 31624177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 32578017 - 32577957
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||||| | |||||| || | || ||||||||||||||||||||||||||||||||||||    
T  32578017 aaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaaca 32577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 34939755 - 34939887
Alignment:
Q  295 ttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtat 394  Q
    ||||||| ||||||| ||||  ||||  ||||||| | ||||||| ||| || ||||||||||| ||||| | |||||||||  ||||||| ||||  ||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaaat 34939854  T
Q  395 gttcatttcaatagataagcttaaataagtcaa 427  Q
    ||| || ||| |||||||||| ||||| |||||    
T  34939855 gtttatgtcactagataagctgaaatacgtcaa 34939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 430
Target Start/End: Complemental strand, 738582 - 738465
Alignment:
Q  311 gagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagat 410  Q
    ||||| ||||| ||||||| | ||||||||||| || |||| |||||| ||||||||||| || | ||| ||| ||||||  ||||| || |||||||||    
T  738582 gagaacttatagaaataagctgaaaacaacttaggg-catg-cataagctgttttcataaactttatcagacaatctcacaaatgtttatctcaatagat 738485  T
Q  411 aagcttaaataagtcaatcc 430  Q
    ||||| |||||||| |||||    
T  738484 aagctcaaataagttaatcc 738465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 9027611 - 9027678
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 384  Q
    |||| |||||||| | ||||||||||| || ||||||||||||| ||| |||||||||| ||||||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacag 9027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 20368250 - 20368147
Alignment:
Q  284 tataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||| |||||||||||| || || | ||||| |||| |||||||||| |||  | |||| |  |||||||||||||||||||||||| |||| |||| |    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaata 20368151  T
Q  384 gtct 387  Q
    ||||    
T  20368150 gtct 20368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 10476196 - 10476087
Alignment:
Q  279 taagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||||| ||| |||||||||||| ||||| | |||| | |||| ||||||| | ||||||| |||||  |||||||| || ||||| |||||||||||      
T  10476196 taagctgtaagttgttttcataagctatcttggaga-gctatagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcat 10476098  T
Q  379 aaacagtctca 389  Q
    |||||||||||    
T  10476097 aaacagtctca 10476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 32171387 - 32171349
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  32171387 tgtcataagctgttttcataagctctctcaaacagtctc 32171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 32917261 - 32917303
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  32917261 catgtcataagttgtttccataagctctcccaaacagtctcac 32917303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 4246402 - 4246507
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||| ||||||  ||||||||||| ||||  | ||||   |||||||||||||| |||||| |||| || |||||||| |||||||| || ||||||     
T  4246402 atataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttccaaaagctca 4246501  T
Q  376 ctcaaa 381  Q
    ||||||    
T  4246502 ctcaaa 4246507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 7931790 - 7931705
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||| || |||||||| |||  |||   ||||||| | ||||||||||| |  ||||||||||||||||||||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 27857423 - 27857464
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  27857423 atgtcataagttgttttcataagctctcccaaacagtttcac 27857464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 725667 - 725631
Alignment:
Q  342 tacggtcatgtcataagttgttttcataagctctctc 378  Q
    ||||| |||||||||||||||||||||||||||||||    
T  725667 tacggacatgtcataagttgttttcataagctctctc 725631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 740892 - 740812
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||||||||||||| || ||||||||||| ||  ||||||  ||||||||  || ||||||| || ||||||||||||    
T  740892 catgtcataagttgtttccacaagctctctcacactttctcacaaatgttcatgacagtagataatctcaaataagtcaat 740812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 364
Target Start/End: Original strand, 2112192 - 2112280
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 364  Q
    |||||| |||||| |||||||||||||||||| |||||   ||||| ||||||    ||||||||||| |  |||||||||||||||||    
T  2112192 atataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 2112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 8147071 - 8146991
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatc 429  Q
    |||| |||||||||||||||||||||| | ||||||||| ||   || | || ||||||| ||| ||||||||||||||||    
T  8147071 atgttataagttgttttcataagctctttgaaacagtctaacaagtggttatgtcaataggtaaacttaaataagtcaatc 8146991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 33832318 - 33832238
Alignment:
Q  309 tagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    |||||||  ||| |||||||| | |||||||||||    |||||||||||||||||||||||| ||||| |||||| ||||    
T  33832318 tagagaatatatgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctcttaaacagactca 33832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 389
Target Start/End: Complemental strand, 7485137 - 7485102
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7485137 ataagttgttttcataagctctctcaaacagcctca 7485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 10031771 - 10031838
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| | ||||||||||| ||  ||||| ||||||| ||||||| ||||| ||||||||||||||    
T  10031771 aaataagatgaaaacaacttatggatatgtcgtaagttggtttcataggctctttcaaacagtctcac 10031838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 376
Target Start/End: Complemental strand, 20377941 - 20377898
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||||||||  | |||||||||||||||||||||||||||||    
T  20377941 aaaacaacttatagacatgtcataagttgttttcataagctctc 20377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 1575928 - 1575982
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataag 371  Q
    |||| |||||||||| |||||| |||| |  ||||||||||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1575982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 2727934 - 2727896
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagaga 314  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  2727934 atataagctataagttgttttcataagctatcctagaga 2727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 4080955 - 4081013
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 381  Q
    ||||||||| ||||||||||| |  |||| ||||||||||||||||||  |||||||||    
T  4080955 aaataagttgaaaacaacttatgaacatggcataagttgttttcataaaatctctcaaa 4081013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 4324516 - 4324423
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    ||||||||||| ||||||| || || ||||  ||||||| | ||| ||  ||| || |||||||||||||||||| ||||| |||||||||||||    
T  4324516 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgtttt-ataagttctctcaaacagt 4324423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 5566208 - 5566150
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 381  Q
    ||||||||| ||||||||||| || ||||| ||||| ||||||||| ||||||| ||||    
T  5566208 aaataagttgaaaacaacttatggacatgtaataagctgttttcattagctctcacaaa 5566150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 30863295 - 30863337
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||| |  ||||||||||||||||||||||||||||    
T  30863295 aaaacaacttatgtacatgtcataagttgttttcataagctct 30863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 33116648 - 33116690
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  33116648 catgtcataagttgttttcataaattccctcaaacagtctcac 33116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 781371 - 781472
Alignment:
Q  275 aatataagctataaattgttttcataaactatccta-gagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||||||||||  | |||||||||| |||| || ||||  ||||| ||||| | | ||||||  | |||| |||||||||| |||||||||||||||    
T  781371 aatataagctataagcttttttcataaattatcttaagagagcttatagaaatatgctgaaaacagttgacggacatgtcataatttgttttcataagct 781470  T
Q  374 ct 375  Q
    ||    
T  781471 ct 781472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 2263256 - 2263293
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagt 385  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  2263256 catgtcatatgttgttttcataagttctctcaaacagt 2263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 3528811 - 3528884
Alignment:
Q  292 gttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgtttt 365  Q
    |||||||| ||||||| | ||||  |||| |||||||| | ||||||| ||| || ||||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgtttt 3528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 5731618 - 5731675
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||  |||||| ||||||    
T  5731618 aaaacaacttacggacatatcataagctattttcataagctctaccaaacactctcac 5731675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 20671942 - 20671905
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagaga 314  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  20671942 tataagctttaaattgttttcataaactatcatagaga 20671905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 426
Target Start/End: Original strand, 30865532 - 30865625
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtca 426  Q
    ||||||||||  | |||||||||||||| ||| |||||||||||| |||| |||| ||   |||| || | || ||||||||| ||||||||||    
T  30865532 aaaacaacttttgatcatgtcataagttatttccataagctctcttaaactgtctaacaagtgtttatgttaacagataagctcaaataagtca 30865625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 381
Target Start/End: Original strand, 31338040 - 31338073
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaa 381  Q
    ||||||||||||||||||||||||||||| ||||    
T  31338040 catgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 31594405 - 31594356
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctctcaaac 382  Q
    ||||||| ||| || ||||||||||||||||| ||||| |||||||||||    
T  31594405 aaaacaaattaaggacatgtcataagttgtttccataacctctctcaaac 31594356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 31671152 - 31671087
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaact 341  Q
    |||||||||||||  ||||||| |||||||||||||| |  |||| |||||||| | |||||||||    
T  31671152 atataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 33498683 - 33498724
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  33498683 catgtcataagttgttttcataagctctaccaaaaagtctca 33498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 1669804 - 1669776
Alignment:
Q  348 catgtcataagttgttttcataagctctc 376  Q
    |||||||||||||||||||||||||||||    
T  1669804 catgtcataagttgttttcataagctctc 1669776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 2027804 - 2027764
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  2027804 catgtcataagttgtttctataagctctcccaaacagtctc 2027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 2455683 - 2455719
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  2455683 ataagttgtttccataagctctttcaaacagtctcac 2455719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 6310256 - 6310228
Alignment:
Q  348 catgtcataagttgttttcataagctctc 376  Q
    |||||||||||||||||||||||||||||    
T  6310256 catgtcataagttgttttcataagctctc 6310228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 8420228 - 8420120
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaat-a 421  Q
    ||||||||| |||| | |||  || ||||||||||| | |||  |||||||||| | |||||||||||   |||| || |||||||||||||| |||| |    
T  8420228 aaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaataa 8420129  T
Q  422 agtcaatcc 430  Q
    |||||||||    
T  8420128 agtcaatcc 8420120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 9559543 - 9559503
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  9559543 atgtcataagttgttttcataagttctcccaaatagtctca 9559503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 30604935 - 30604995
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaaca 383  Q
    ||||||||| |||| |||||| |  ||| ||||| |||||||| |||||||||||||||||    
T  30604935 aaataagttgaaaagaacttatgaacatttcataggttgttttaataagctctctcaaaca 30604995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 10272508 - 10272399
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||||||||| |||||||||||| | ||| | ||||  |||| |||||||| | |||||||||||| | |||||||||||||||||  |||||| |||    
T  10272508 tataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttctataagcactc 10272409  T
Q  377 tcaaacagtc 386  Q
     |||| ||||    
T  10272408 ccaaatagtc 10272399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 4619692 - 4619808
Alignment:
Q  269 tgtttcaatataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcat 368  Q
    |||||| |||||| ||||||| ||| ||||||| ||||| | ||||| ||||  ||||||| | ||| || |||| |  |||||||| ||||||||||||    
T  4619692 tgtttctatataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcat 4619791  T
Q  369 aagctctctcaaacagt 385  Q
    |||||||| ||||||||    
T  4619792 aagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 375
Target Start/End: Complemental strand, 41957514 - 41957430
Alignment:
Q  291 tgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||| ||||||| ||||| |||| |||||||| | ||||||||||| || ||||||||||| ||||| | ||||||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctct 41957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 37611282 - 37611179
Alignment:
Q  287 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37611183  T
Q  387 tcac 390  Q
    ||||    
T  37611182 tcac 37611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 37788012 - 37787909
Alignment:
Q  287 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||| ||||| | ||||  ||||  ||||||  | |||||| |||| |  ||||||| |||||||||||||||||||||||||||| ||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37787913  T
Q  387 tcac 390  Q
    ||||    
T  37787912 tcac 37787909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 37526277 - 37526163
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| ||||||||||||  | | || ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| ||||||||||||    
T  37526277 atataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctct 37526178  T
Q  376 ctcaaacagtctcac 390  Q
    |||||||||||||||    
T  37526177 ctcaaacagtctcac 37526163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 37588438 - 37588324
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    ||||||||||||| ||||||||||||  ||| || ||||  ||||  ||||||| | |||||| ||||    ||| ||||| ||||| ||||||||||||    
T  37588438 atataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctct 37588339  T
Q  376 ctcaaacagtctcac 390  Q
    |||||||||||||||    
T  37588338 ctcaaacagtctcac 37588324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 13604886 - 13604825
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||| |||||||||| |||||||| || || ||||||||||| |||||||||||||||||||    
T  13604886 ttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctctc 13604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 14295498 - 14295611
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  ||||||| ||| ||||||| ||||  || || || |||| | |||||| ||||  | ||| ||||||| ||||||||||||||||    
T  14295498 atataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctgttttcataagctct 14295597  T
Q  376 ctcaaacagtctca 389  Q
    |||| |||||||||    
T  14295598 ctcagacagtctca 14295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 11297202 - 11297122
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    |||||| |||||||||| |||||||||| ||||||||||| ||   |||| ||  || |||||||||||||||||||||||    
T  11297202 catgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagcttaaataagtcaat 11297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 37794774 - 37794679
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||||||| ||| ||||||| | |||||||| ||| |||||  ||||||| | |||||| |||| |  ||||||||||||||||||||||||||    
T  37794774 tataagctatagattattttcatgagctatcctataga-gttatcgaaataagctcaaaacagcttatgaacatgtcataagttgttttcataagct 37794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 40159882 - 40159962
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||||||||||||||  |||||||| ||||||||| ||||  ||||| || | | ||||||| |||||||||||||||    
T  40159882 catgtcataagttgtttttctaagctctttcaaacagtatcacacatgtttatgtaagtagataaacttaaataagtcaat 40159962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 12242777 - 12242674
Alignment:
Q  287 aaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||| ||||| | ||||  ||||  || |||| | ||||||||| | | |||||||||||||| ||| |||||||||||||||| | ||    
T  12242777 aaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaataatc 12242678  T
Q  387 tcac 390  Q
    ||||    
T  12242677 tcac 12242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 15246826 - 15246933
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacg-gtcatgtcataagttgttttcataagctct 375  Q
    |||||||||| |  ||||||||||| ||||| ||||||| | |||||||||||||  ||| |||||| |  | ||||||||||||| ||||||||| |||    
T  15246826 tataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttcataagttct 15246925  T
Q  376 ctcaaaca 383  Q
    | ||||||    
T  15246926 cccaaaca 15246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 29363057 - 29363100
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  29363057 aaaacaacttatgggcatgtcataagttgttttcataagctctc 29363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 37690715 - 37690600
Alignment:
Q  276 atataagctataaattgttttcataaact-atcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctc 374  Q
    ||||||||||||| ||||||||||||| | ||  | ||||  ||||  ||||||| | |||||| ||||    ||||||||| ||||| |||||||||||    
T  37690715 atataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctc 37690616  T
Q  375 tctcaaacagtctcac 390  Q
    ||||||||||||||||    
T  37690615 tctcaaacagtctcac 37690600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 390
Target Start/End: Original strand, 7674641 - 7674754
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||| ||||| ||||||||||| ||||| | ||||| || | |||||||| | |||||| ||||    ||||||||||||||||| |||||| |||     
T  7674641 tataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttctt 7674740  T
Q  377 tcaaacagtctcac 390  Q
     ||| |||||||||    
T  7674741 ccaagcagtctcac 7674754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 10391333 - 10391448
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataa--aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagct 373  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||| |||  ||||||||| ||||||||| |  | ||||||||||  |||||| |||| ||    
T  10391333 atataagctataatttgtttttataagctatcctagag-agttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtttttataaact 10391431  T
Q  374 ctctcaaacagtctcac 390  Q
    ||  |||||| ||||||    
T  10391432 cttccaaacaatctcac 10391448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 11457148 - 11457241
Alignment:
Q  334 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaa 427  Q
    ||||| |||| || ||||||||||||||||| ||||||||||   ||||||||||||   ||||  |  ||||||||||||| |||||||||||    
T  11457148 aaacagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataagtcaa 11457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 388
Target Start/End: Original strand, 8090004 - 8090040
Alignment:
Q  352 tcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8090004 tcataagttgttttcataagctctctcaaatagtctc 8090040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 10125724 - 10125644
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaat 428  Q
    ||||||||||||||||| |||||| ||||||| ||| | ||||   || |||| ||| |||||||||||||||||| ||||    
T  10125724 catgtcataagttgtttacataagttctctcagacaatgtcacaagtgctcatgtcagtagataagcttaaataagccaat 10125644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 10152388 - 10152440
Alignment:
Q  338 aacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||| || |||||||||||||||||||||||||||||  ||| ||||||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaatagtctcac 10152440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 15003592 - 15003504
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttt 364  Q
    ||||||||||||| | |||||||||| |||||| |||||  ||||  |||||| |  |||||||||||||  |||||| ||||||||||    
T  15003592 atataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacatgtcgtaagttgttt 15003504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 2568651 - 2568762
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    |||||||||||| |||||||||||| ||||| | ||||  | || |||||||| | |||| |||||| |   |||||||||| |||||||||||| |||     
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttctt 2568750  T
Q  377 tcaaacagtctc 388  Q
      ||||||||||    
T  2568751 ctaaacagtctc 2568762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 7319398 - 7319465
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    |||||||||||||| ||||||| ||| ||||| | ||||| ||||||||||||| | ||| |||||||    
T  7319398 atataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaagcaactta 7319465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 378
Target Start/End: Original strand, 17368675 - 17368770
Alignment:
Q  283 ctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||||| |||||||||||| ||||| | |||| |||||  ||||||| | |||||  | || |  |||||||||||||||||||||||| ||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctctc 17368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 28586817 - 28586730
Alignment:
Q  303 ctatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||||  ||||  ||||||| | |||||| |||||||  |||||||||| | ||| ||||||||||| |||||||| ||||    
T  28586817 ctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcac 28586730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 387
Target Start/End: Original strand, 35960405 - 35960516
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||| |||||| ||| |||||||| ||||||| || |   || | ||||||| | |||||| |||| || |||||| ||||||| || ||||||||||    
T  35960405 atataaactataagttgatttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccataagctct 35960504  T
Q  376 ctcaaacagtct 387  Q
    |||||| |||||    
T  35960505 ctcaaatagtct 35960516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 38728441 - 38728548
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    ||||||| | |||||| |||| |  ||||||||||| | ||||||||||||||| |||||| || |||   |||| ||  ||||||||||||| |||||     
T  38728441 aaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaacaatcacacaggtgtttataccaatagataagctcaaatat 38728540  T
Q  423 gtcaatcc 430  Q
    ||||||||    
T  38728541 gtcaatcc 38728548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 4273407 - 4273309
Alignment:
Q  324 aataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    |||||||| |||||||||||  | || |||||||| ||||| |||| | ||||||||||| ||||||  ||||| ||  ||||||| ||||| ||||||    
T  4273407 aataagttgaaaacaacttatagacaagtcataagctgtttccataggttctctcaaacaatctcacaaatgtttatgccaatagacaagctaaaataa 4273309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 10907442 - 10907484
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  10907442 catgacataagttgttttcataagctcttccaaacagtctcac 10907484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 424
Target Start/End: Complemental strand, 12407722 - 12407660
Alignment:
Q  362 ttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagt 424  Q
    ||||||||||||||||||||| |||||||   |||| || |||||||||||| | ||||||||    
T  12407722 ttttcataagctctctcaaaccgtctcacaagtgtttatgtcaatagataagttcaaataagt 12407660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 12425564 - 12425630
Alignment:
Q  277 tataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaactta 343  Q
    ||||||||||||  |||||||| || ||||| | ||||| |||| |||||||||| |||||||||||    
T  12425564 tataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactta 12425630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 12460007 - 12459965
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  12460007 catgtcataagttgttttcataggttctcccaaacagtctcac 12459965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 14980559 - 14980613
Alignment:
Q  334 aaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctc 388  Q
    |||||||||| |  ||||||||||||  |||| ||||||||||||||||||||||    
T  14980559 aaacaacttatgtacatgtcataagtcatttttataagctctctcaaacagtctc 14980613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 29590660 - 29590594
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||||| ||||||||||| || || |||||||||| | | ||||||||  ||||||||||||||    
T  29590660 aaataagttgaaaacaacttatggacaagtcataagttttgtccataagctaactcaaacagtctca 29590594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 38047885 - 38047847
Alignment:
Q  348 catgtcataagttgttttcataagctctctcaaacagtc 386  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  38047885 catgtcataagttgtttccataagctctcccaaacagtc 38047847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 5531083 - 5531124
Alignment:
Q  333 aaaacaacttacggtcatgtcataagttgttttcataagctc 374  Q
    ||||||||||| || ||| |||||||||||||||||||||||    
T  5531083 aaaacaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 13244551 - 13244482
Alignment:
Q  354 ataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataag 423  Q
    ||||||||||||||||||||||  |||||||| |||    |||| |||||||||||||| || |||||||    
T  13244551 ataagttgttttcataagctcttccaaacagtgtcataagtgtttatttcaatagataaactcaaataag 13244482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 29336699 - 29336736
Alignment:
Q  353 cataagttgttttcataagctctctcaaacagtctcac 390  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  29336699 cataagttgtttccataagctctctcaatcagtctcac 29336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 30269764 - 30269711
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||| | ||||||||||| || ||||| |||||||||||| ||||||||||    
T  30269764 aaataagctaaaaacaacttatgggcatgttataagttgttttaataagctctc 30269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 2092582 - 2092518
Alignment:
Q  317 ttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 381  Q
    |||| |||| ||||| ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  2092582 ttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctctcccaaa 2092518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 11095511 - 11095427
Alignment:
Q  338 aacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataa 422  Q
    |||||| || ||||||||||| ||||| || ||| ||||||||||| | ||||   |||| || ||| |||||||||||||||||    
T  11095511 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataa 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 15402903 - 15402807
Alignment:
Q  280 aagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctc 376  Q
    ||||||||| |||||||||||| ||||  |||||||  |||| |||| || | ||||||||||| |  ||| |||||| |||||||| |||| ||||    
T  15402903 aagctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacatatcataatttgttttcgtaagttctc 15402807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 15905404 - 15905364
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  15905404 tgtcataagctgttttcataagctctctcaaagactctcac 15905364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 16457982 - 16457942
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  16457982 tgtcataagctgttttcataagttctcccaaacagtctcac 16457942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 19113123 - 19113083
Alignment:
Q  350 tgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  19113123 tgtcataagttattttcgtaagctctcccaaacagtctcac 19113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 376
Target Start/End: Original strand, 19369305 - 19369405
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||| ||||||  || ||||||||||| ||| |||||  ||||| |||||| || |||||| ||||| | |||||||| || || || ||||||||||    
T  19369305 atataaactataagctggtttcataaactttcccagagagcttatagaaataaattgaaaacagcttacagacatgtcatgagctgcttccataagctct 19369404  T
Q  376 c 376  Q
    |    
T  19369405 c 19369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 21768229 - 21768173
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctc 378  Q
    |||||||||| |||||| | || || ||||||||||| ||||||||||||| |||||    
T  21768229 aaaataagttgaaaacagcgtatggacatgtcataagctgttttcataagcactctc 21768173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 36542360 - 36542256
Alignment:
Q  276 atataagctataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctct 375  Q
    |||||||||||||  || || ||||| ||||||||||||  || |  ||||||||| |||||| |||  || ||||||||||| ||||| |||||  |||    
T  36542360 atataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataaaatct 36542261  T
Q  376 ctcaa 380  Q
    |||||    
T  36542260 ctcaa 36542256  T

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Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 10648 - 10581
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctcac 390  Q
    ||||||| | ||||||||||| || |||||||| |||||||| |||||||| | ||||||||||||||    
T  10648 aaataagctgaaaacaacttatggacatgtcattagttgtttacataagctttgtcaaacagtctcac 10581  T

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Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 6611 - 6692
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||| |||||||||||| ||||||||||| |||||||   || | ||  ||||| ||||||| ||||||||||||||    
T  6611 atgtcataacttgttttcataatctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatcc 6692  T

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Target: scaffold0366 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 6609 - 6690
Alignment:
Q  349 atgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatcc 430  Q
    ||||||||| |||||||||||| ||||||||||| |||||||   || | ||  ||||| ||||||| ||||||||||||||    
T  6609 atgtcataacttgttttcataatctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatcc 6690  T

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Target: scaffold0608 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 9669 - 9606
Alignment:
Q  322 aaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagt 385  Q
    |||||||| | |||||| |||| |  ||||| |||||||||||||||||| |||||||||||||    
T  9669 aaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 9606  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 306332 - 306431
Alignment:
Q  290 ttgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    |||||||||||| ||||||||||||  ||||  || |||| | |||||| |||| || ||||||||||| ||||| ||||||| | ||| || |||||||    
T  306332 ttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataagcgcactcgaagagtctca 306431  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 27615 - 27681
Alignment:
Q  323 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 389  Q
    ||||||| | |||||||||||  | ||||||||||| | ||| ||||||||||| ||||||||||||    
T  27615 aaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaacagtctca 27681  T

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