View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5794_2D_low_17 (Length: 328)
Name: NF5794_2D_low_17
Description: NF5794_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5794_2D_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 309
Target Start/End: Original strand, 46990582 - 46990885
Alignment:
| Q |
6 |
acaatgagatggacatccaattaatttgctgccaatcggatgcaagtacattgtggcttgtcccacctgttgtgcaggccagatttatgaagtcccttag |
105 |
Q |
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| T |
46990582 |
acaatgagaaagacatccaattaatttgctgccaatcggatgcaagtacattgtggcttgtcccacctgttgtgcaggccagatttatgaagtcccttag |
46990681 |
T |
|
| Q |
106 |
gtggaatatggacattactttctcctgggaatttaccagagataggcctaaaggaaaggaagtagtgaaatatgaattaacaatacaggaacaggatctt |
205 |
Q |
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| T |
46990682 |
gtggaatatggacattactttctcctgggaatttaccagagataggcctaaaggaaaggaagtagtgaaatatgaattaacaatacaggaacaggatctt |
46990781 |
T |
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| Q |
206 |
cccacatcttcagaagtgactaaagtcttcaatggtacttccaatagtttctcagtgttcaatatttatcctagatattttcgggtcacaggctccggag |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46990782 |
cccacatcttcagaagtgactaaagtcttcaatggtacttccaatagtttctcagtgttcaatatttatcctagatattttcgggtcacaggctccggag |
46990881 |
T |
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| Q |
306 |
atgt |
309 |
Q |
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|||| |
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| T |
46990882 |
atgt |
46990885 |
T |
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