View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5798-Insertion-1 (Length: 930)

Name: NF5798-Insertion-1
Description: NF5798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5798-Insertion-1
NF5798-Insertion-1
[»] chr7 (47 HSPs)
chr7 (10-930)||(40763205-40764112)
chr7 (57-197)||(29034678-29034818)
chr7 (56-197)||(7322931-7323072)
chr7 (57-197)||(5240310-5240450)
chr7 (58-197)||(43567484-43567623)
chr7 (56-197)||(8292735-8292876)
chr7 (57-197)||(24359686-24359826)
chr7 (57-197)||(27053471-27053611)
chr7 (57-196)||(8380432-8380571)
chr7 (56-197)||(1910234-1910374)
chr7 (56-173)||(22521576-22521693)
chr7 (57-197)||(5347950-5348087)
chr7 (90-197)||(48454800-48454907)
chr7 (71-169)||(3681699-3681797)
chr7 (57-197)||(36279113-36279250)
chr7 (57-138)||(29687467-29687548)
chr7 (58-171)||(42222213-42222326)
chr7 (57-197)||(8258621-8258756)
chr7 (57-173)||(41188788-41188904)
chr7 (57-171)||(46478560-46478673)
chr7 (70-197)||(22707053-22707179)
chr7 (57-197)||(30538458-30538595)
chr7 (57-182)||(49069546-49069671)
chr7 (58-126)||(40194818-40194886)
chr7 (57-172)||(40066920-40067033)
chr7 (70-154)||(31626062-31626146)
chr7 (58-194)||(43958064-43958200)
chr7 (70-134)||(46042752-46042816)
chr7 (56-133)||(30388702-30388779)
chr7 (56-132)||(10575802-10575878)
chr7 (69-157)||(32204185-32204273)
chr7 (57-153)||(18529175-18529271)
chr7 (57-131)||(44296945-44297019)
chr7 (56-137)||(6548520-6548601)
chr7 (57-134)||(16082473-16082550)
chr7 (56-137)||(48879660-48879741)
chr7 (91-133)||(4686085-4686127)
chr7 (81-137)||(16931906-16931961)
chr7 (81-137)||(16937289-16937344)
chr7 (98-134)||(35003637-35003673)
chr7 (81-153)||(40774264-40774336)
chr7 (81-132)||(5543061-5543112)
chr7 (82-137)||(41141040-41141095)
chr7 (81-127)||(43189685-43189731)
chr7 (91-132)||(3720157-3720198)
chr7 (81-154)||(29247938-29248010)
chr7 (89-182)||(35239780-35239873)
[»] chr8 (39 HSPs)
chr8 (417-762)||(42911328-42911673)
chr8 (56-197)||(21016035-21016176)
chr8 (56-197)||(19389288-19389429)
chr8 (57-197)||(45337995-45338135)
chr8 (60-197)||(6939152-6939289)
chr8 (56-197)||(4989926-4990064)
chr8 (65-194)||(21016233-21016362)
chr8 (58-165)||(26195383-26195490)
chr8 (57-197)||(10694798-10694938)
chr8 (63-171)||(25249345-25249453)
chr8 (262-419)||(42910826-42910974)
chr8 (70-171)||(8018765-8018866)
chr8 (57-166)||(18068953-18069062)
chr8 (75-197)||(26672799-26672920)
chr8 (58-194)||(37433258-37433392)
chr8 (56-195)||(34713899-34714040)
chr8 (57-197)||(44874324-44874456)
chr8 (55-197)||(5129434-5129582)
chr8 (57-197)||(3174447-3174589)
chr8 (755-846)||(42911546-42911636)
chr8 (57-165)||(6433535-6433643)
chr8 (56-126)||(33741523-33741593)
chr8 (57-165)||(14855394-14855502)
chr8 (847-930)||(42911676-42911759)
chr8 (79-164)||(26892799-26892884)
chr8 (98-197)||(35930168-35930267)
chr8 (56-170)||(6396278-6396392)
chr8 (57-131)||(20212433-20212507)
chr8 (96-173)||(7532815-7532892)
chr8 (57-154)||(38869995-38870092)
chr8 (58-133)||(37922972-37923046)
chr8 (84-154)||(31596442-31596512)
chr8 (60-173)||(11332796-11332909)
chr8 (57-137)||(39972190-39972270)
chr8 (121-194)||(19976471-19976545)
chr8 (70-112)||(30351595-30351637)
chr8 (91-132)||(11295507-11295548)
chr8 (84-129)||(17320000-17320045)
chr8 (10-47)||(42910722-42910759)
[»] chr1 (51 HSPs)
chr1 (57-197)||(34874558-34874698)
chr1 (57-197)||(27209696-27209836)
chr1 (56-197)||(28850885-28851025)
chr1 (56-197)||(41147453-41147594)
chr1 (57-197)||(11385972-11386112)
chr1 (57-197)||(47655346-47655486)
chr1 (57-194)||(49508712-49508848)
chr1 (57-197)||(22346212-22346352)
chr1 (57-197)||(33929957-33930097)
chr1 (58-197)||(42607299-42607438)
chr1 (56-197)||(2125682-2125823)
chr1 (74-197)||(11385785-11385908)
chr1 (58-194)||(932135-932271)
chr1 (57-197)||(24140764-24140903)
chr1 (73-197)||(32213864-32213988)
chr1 (58-197)||(7190450-7190589)
chr1 (57-197)||(4940715-4940855)
chr1 (70-194)||(40845255-40845379)
chr1 (57-197)||(43433766-43433906)
chr1 (56-197)||(50295408-50295550)
chr1 (56-177)||(6170546-6170667)
chr1 (57-170)||(49901917-49902030)
chr1 (56-170)||(28277484-28277598)
chr1 (56-197)||(29966812-29966954)
chr1 (70-197)||(31975491-31975618)
chr1 (56-197)||(45721745-45721882)
chr1 (58-175)||(52396435-52396551)
chr1 (93-197)||(5945447-5945551)
chr1 (70-171)||(4656020-4656121)
chr1 (57-197)||(50154464-50154604)
chr1 (58-170)||(26469584-26469696)
chr1 (57-133)||(47895325-47895401)
chr1 (59-134)||(30222613-30222689)
chr1 (58-197)||(44286864-44287003)
chr1 (69-171)||(40920188-40920292)
chr1 (56-137)||(43168131-43168212)
chr1 (81-133)||(17402963-17403015)
chr1 (57-132)||(44359712-44359787)
chr1 (70-179)||(41492913-41493021)
chr1 (57-134)||(48938627-48938703)
chr1 (57-137)||(14331828-14331908)
chr1 (81-133)||(41898898-41898950)
chr1 (58-137)||(8892806-8892885)
chr1 (102-196)||(8244128-8244219)
chr1 (85-138)||(51046678-51046731)
chr1 (96-152)||(894960-895016)
chr1 (81-117)||(46296240-46296276)
chr1 (91-138)||(44043500-44043547)
chr1 (81-179)||(16691309-16691407)
chr1 (91-133)||(27210750-27210792)
chr1 (377-419)||(28615743-28615785)
[»] chr4 (57 HSPs)
chr4 (57-197)||(26040338-26040478)
chr4 (57-197)||(35808374-35808514)
chr4 (57-197)||(41956191-41956331)
chr4 (57-197)||(55669730-55669870)
chr4 (70-197)||(34016629-34016756)
chr4 (57-197)||(50514592-50514731)
chr4 (58-197)||(23765570-23765709)
chr4 (57-194)||(45688734-45688871)
chr4 (56-197)||(31754928-31755069)
chr4 (57-197)||(34316700-34316841)
chr4 (56-197)||(54339103-54339243)
chr4 (57-197)||(20811254-20811394)
chr4 (56-197)||(26831764-26831904)
chr4 (56-197)||(27839284-27839425)
chr4 (56-197)||(2362619-2362762)
chr4 (57-197)||(10100091-10100231)
chr4 (56-197)||(51266914-51267055)
chr4 (57-153)||(19328950-19329046)
chr4 (58-197)||(32131134-32131273)
chr4 (57-197)||(31168125-31168265)
chr4 (57-195)||(30475416-30475554)
chr4 (57-137)||(47188703-47188783)
chr4 (57-170)||(33951691-33951804)
chr4 (57-153)||(52341592-52341688)
chr4 (101-197)||(19876161-19876257)
chr4 (109-197)||(51290473-51290561)
chr4 (56-190)||(53566935-53567072)
chr4 (56-179)||(35675186-35675309)
chr4 (57-195)||(40436072-40436210)
chr4 (56-118)||(9693528-9693590)
chr4 (88-196)||(31487743-31487851)
chr4 (91-171)||(35511184-35511264)
chr4 (57-147)||(45088061-45088148)
chr4 (56-150)||(3769803-3769897)
chr4 (58-133)||(15986258-15986333)
chr4 (56-167)||(20456559-20456670)
chr4 (82-137)||(46823488-46823543)
chr4 (71-173)||(30617954-30618056)
chr4 (111-197)||(46695940-46696026)
chr4 (74-182)||(13498110-13498218)
chr4 (70-134)||(35927315-35927379)
chr4 (81-137)||(36486724-36486780)
chr4 (58-154)||(51018400-51018496)
chr4 (102-196)||(9693361-9693454)
chr4 (71-133)||(48513624-48513686)
chr4 (96-137)||(11996141-11996182)
chr4 (70-154)||(1457556-1457640)
chr4 (145-197)||(19328725-19328777)
chr4 (74-173)||(29462809-29462908)
chr4 (57-132)||(31494704-31494779)
chr4 (91-137)||(20435828-20435874)
chr4 (91-137)||(49483122-49483168)
chr4 (99-132)||(1801635-1801668)
chr4 (81-134)||(32584560-32584613)
chr4 (56-137)||(39158364-39158445)
chr4 (84-137)||(40593620-40593672)
chr4 (91-132)||(52895749-52895790)
[»] chr3 (40 HSPs)
chr3 (58-197)||(8715480-8715618)
chr3 (58-197)||(9067367-9067505)
chr3 (57-195)||(46317477-46317615)
chr3 (57-197)||(44570364-44570504)
chr3 (57-197)||(36730131-36730271)
chr3 (56-197)||(37509101-37509242)
chr3 (57-197)||(4759828-4759968)
chr3 (57-197)||(32415560-32415700)
chr3 (57-196)||(35306323-35306462)
chr3 (57-197)||(29915553-29915693)
chr3 (57-197)||(29964706-29964846)
chr3 (57-197)||(44695649-44695789)
chr3 (57-195)||(10854850-10854992)
chr3 (57-194)||(51817294-51817430)
chr3 (58-166)||(12905292-12905399)
chr3 (57-197)||(25102300-25102439)
chr3 (57-171)||(8847456-8847570)
chr3 (57-154)||(52570771-52570870)
chr3 (56-150)||(20227405-20227499)
chr3 (57-154)||(12051029-12051126)
chr3 (57-126)||(31647295-31647364)
chr3 (97-197)||(1803919-1804019)
chr3 (57-178)||(45899540-45899662)
chr3 (107-197)||(48136701-48136790)
chr3 (74-173)||(18789-18888)
chr3 (70-137)||(11316970-11317037)
chr3 (70-133)||(34060808-34060871)
chr3 (70-133)||(41345979-41346042)
chr3 (74-154)||(18949-19029)
chr3 (141-197)||(41346349-41346405)
chr3 (71-154)||(21324521-21324603)
chr3 (84-131)||(49976185-49976232)
chr3 (96-151)||(33641282-33641337)
chr3 (70-137)||(34750295-34750362)
chr3 (85-138)||(41998901-41998954)
chr3 (75-134)||(39974847-39974906)
chr3 (70-124)||(50420688-50420742)
chr3 (99-152)||(9189255-9189308)
chr3 (73-114)||(11675320-11675361)
chr3 (90-159)||(26850510-26850579)
[»] chr2 (44 HSPs)
chr2 (70-197)||(765128-765255)
chr2 (58-197)||(2966532-2966671)
chr2 (57-197)||(39401513-39401652)
chr2 (57-197)||(17095045-17095184)
chr2 (56-197)||(27495113-27495254)
chr2 (56-194)||(39085773-39085911)
chr2 (57-197)||(17056036-17056175)
chr2 (57-197)||(17068483-17068622)
chr2 (57-196)||(862580-862719)
chr2 (63-197)||(1321165-1321299)
chr2 (57-194)||(16361557-16361694)
chr2 (60-197)||(33864349-33864486)
chr2 (57-173)||(6999193-6999309)
chr2 (57-197)||(17074466-17074605)
chr2 (56-197)||(41436468-41436609)
chr2 (56-190)||(35445275-35445410)
chr2 (56-185)||(9201485-9201613)
chr2 (74-197)||(44299659-44299782)
chr2 (63-190)||(17603808-17603935)
chr2 (57-171)||(17118377-17118490)
chr2 (57-137)||(23685690-23685770)
chr2 (63-197)||(13997882-13998016)
chr2 (56-184)||(33726370-33726498)
chr2 (70-197)||(44173123-44173250)
chr2 (56-126)||(15004917-15004987)
chr2 (79-189)||(43140309-43140419)
chr2 (58-197)||(464787-464927)
chr2 (57-171)||(2239573-2239687)
chr2 (57-115)||(11445379-11445437)
chr2 (102-153)||(11445313-11445364)
chr2 (81-171)||(34220650-34220740)
chr2 (81-137)||(747529-747585)
chr2 (56-160)||(10900265-10900369)
chr2 (58-169)||(34334167-34334278)
chr2 (53-159)||(3454714-3454819)
chr2 (57-133)||(11659253-11659329)
chr2 (81-136)||(29260167-29260222)
chr2 (91-134)||(34512671-34512714)
chr2 (81-159)||(2136451-2136529)
chr2 (96-138)||(2958506-2958548)
chr2 (90-132)||(9965098-9965140)
chr2 (99-133)||(37230253-37230287)
chr2 (58-124)||(2805373-2805441)
chr2 (90-171)||(8327004-8327085)
[»] chr6 (24 HSPs)
chr6 (56-196)||(10855423-10855562)
chr6 (57-172)||(12191484-12191599)
chr6 (56-197)||(5578264-5578405)
chr6 (56-197)||(26572060-26572196)
chr6 (61-197)||(16437568-16437696)
chr6 (64-173)||(6866913-6867022)
chr6 (57-154)||(7875202-7875299)
chr6 (57-197)||(7274192-7274332)
chr6 (89-197)||(29692319-29692427)
chr6 (57-154)||(7880448-7880545)
chr6 (109-197)||(32786259-32786346)
chr6 (75-194)||(8324085-8324204)
chr6 (57-182)||(31220320-31220445)
chr6 (57-107)||(32786060-32786110)
chr6 (56-133)||(21186059-21186136)
chr6 (58-197)||(12175552-12175685)
chr6 (56-130)||(34780023-34780097)
chr6 (81-132)||(27127550-27127601)
chr6 (70-137)||(28014639-28014706)
chr6 (56-126)||(6507438-6507508)
chr6 (85-138)||(1947424-1947477)
chr6 (56-133)||(14232533-14232610)
chr6 (93-138)||(19646024-19646069)
chr6 (67-132)||(29964302-29964367)
[»] chr5 (44 HSPs)
chr5 (57-197)||(5151480-5151620)
chr5 (57-194)||(35653236-35653373)
chr5 (56-197)||(4421942-4422083)
chr5 (57-197)||(4962495-4962634)
chr5 (57-197)||(34546769-34546909)
chr5 (56-179)||(25017287-25017410)
chr5 (56-194)||(3639056-3639193)
chr5 (57-197)||(16315512-16315650)
chr5 (56-197)||(39567893-39568034)
chr5 (57-197)||(28143101-28143241)
chr5 (57-197)||(35945237-35945377)
chr5 (75-197)||(1479114-1479236)
chr5 (71-197)||(37243852-37243977)
chr5 (56-197)||(43414042-43414183)
chr5 (69-178)||(1759820-1759929)
chr5 (58-197)||(338742-338881)
chr5 (57-153)||(13951258-13951354)
chr5 (57-197)||(8410133-8410273)
chr5 (63-154)||(12068195-12068286)
chr5 (57-152)||(12914166-12914261)
chr5 (86-172)||(27823279-27823365)
chr5 (61-197)||(10017600-10017733)
chr5 (105-194)||(15915871-15915960)
chr5 (70-178)||(25568288-25568397)
chr5 (64-196)||(40099333-40099461)
chr5 (70-133)||(39335477-39335540)
chr5 (57-133)||(10406779-10406854)
chr5 (81-137)||(39069314-39069370)
chr5 (56-146)||(39693000-39693090)
chr5 (69-157)||(6823770-6823859)
chr5 (70-112)||(16899635-16899677)
chr5 (57-159)||(39042051-39042153)
chr5 (81-154)||(3015071-3015144)
chr5 (81-137)||(678465-678521)
chr5 (81-133)||(10163668-10163720)
chr5 (96-132)||(24288517-24288553)
chr5 (96-132)||(24373668-24373704)
chr5 (86-177)||(27535114-27535206)
chr5 (57-137)||(39167587-39167666)
chr5 (98-133)||(5058777-5058812)
chr5 (91-134)||(12349585-12349628)
chr5 (70-137)||(28599692-28599759)
chr5 (57-107)||(4838272-4838322)
chr5 (81-154)||(38610313-38610386)
[»] scaffold0062 (3 HSPs)
scaffold0062 (57-197)||(16750-16889)
scaffold0062 (57-197)||(26918-27057)
scaffold0062 (57-197)||(37084-37223)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-189)||(392114-392249)
[»] scaffold0809 (2 HSPs)
scaffold0809 (56-116)||(4705-4765)
scaffold0809 (108-196)||(4249-4337)
[»] scaffold0050 (1 HSPs)
scaffold0050 (71-126)||(37428-37483)
[»] scaffold0144 (1 HSPs)
scaffold0144 (57-137)||(39580-39658)
[»] scaffold0169 (1 HSPs)
scaffold0169 (91-138)||(9045-9092)


Alignment Details
Target: chr7 (Bit Score: 828; Significance: 0; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 828; E-Value: 0
Query Start/End: Original strand, 10 - 930
Target Start/End: Original strand, 40763205 - 40764112
Alignment:
Q  10 gaattaagatacatctttattggaaattaccaaatactttatggtttcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagtt 109  Q
    ||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40763205 gaattaagatacatctttattggaaattaccaaata------------aaaagtagcatatttgcattggtttcaacaacattttaacttttaaaaagtt 40763292  T
Q  110 aaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctcgatactttataa 209  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  40763293 aaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcgatactttataa 40763392  T
Q  210 accatccatcaacatttttattcttaacattattgatgttttcagggacaattgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatc 309  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763393 accatccatcaacatttttattcttaacatttttgatgttttcagggacaattgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatc 40763492  T
Q  310 cttaaaattaacaaaatttagaaatgatctctaaaattcatacttccctgtctcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaa 409  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763493 cttaaaattaacaaaatttagaaatgatctctaaagttcatacttccctgtctcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaa 40763592  T
Q  410 atagactaattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatg 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763593 atagactaattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatg 40763692  T
Q  510 ctcttgcttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaat 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763693 ctcttgcttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaat 40763792  T
Q  610 gtttcaagtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatctgatgttgaagctgctaagctt 709  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763793 gtttcaagtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatctgatgttgaagctgctaagctt 40763892  T
Q  710 gttgttcaggagaagggggaggttgtttcacaattaaaaactgcagaagcagaaaggttgggagaaggaacagatacagaatcctcctcctactgaatct 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40763893 gttgttcaggagaagggggaggttgtttcacaattaaaaactgcagaagcagaaaggtt-ggagaaggaacagatacagaatcctcctcctactgaatct 40763991  T
Q  810 aatgttgaagctgctaagcttgttgctcaggagaaggagaaggagattactgctgctgtggatgaacttaaaaaggctaaacggaatgtatccaagctgg 909  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40763992 gatgttgaagctgctaagcttgttgctcaggagaaggagaaggagattactgctgctgtggatgaacttaaaaaagctaaacggaatgtatccaagctgg 40764091  T
Q  910 aagaaagatctaaacttcagc 930  Q
    |||||||||||||||||||||    
T  40764092 aagaaagatctaaacttcagc 40764112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 29034678 - 29034818
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||| |    
T  29034678 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttatattttta 29034777  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  29034778 tccccttatccaatgcctcaaggacaatggttagcattctc 29034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 7323072 - 7322931
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||     
T  7323072 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttttcaaggttatatttctattttt 7322973  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||  ||||||| |||||||||||||||||    
T  7322972 atcctcttatccaatatctcaagggcaatggttagcattctc 7322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 5240450 - 5240310
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||| |    
T  5240450 caaaagtagcatgtttgcattggtttcaataacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctattttta 5240351  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  5240350 tccctttatccaatgcctcaaggacaatggttagcattctc 5240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 43567623 - 43567484
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||| ||    
T  43567623 aaaagtatcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactataattctatttttat 43567524  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |  ||||||||||||| ||||| |||||||||||| ||||    
T  43567523 ctccttatccaatgccccaagggcaatggttagcaatctc 43567484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 8292735 - 8292876
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||     
T  8292735 tcaaaagtagcatgtttggattgatttcaacaacattttgacttttaaaaaggcaaatttataacttttcaccattttccaatgctatatttctattttt 8292834  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||  ||| ||||||| |||||||||||    
T  8292835 atccccttatccaatgctccaaagacaatgattagcattctc 8292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 24359826 - 24359686
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||  | |||||||||||||| |    
T  24359826 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatccctttttaccattttccattgctatatttctattttta 24359727  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||| ||  |||| ||||||||| |||||||    
T  24359726 tccccttatccaatacccgaagggcaatggttaacattctc 24359686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 27053611 - 27053471
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||| |    
T  27053611 caaaagtagaatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttctgatgctatatttctattttta 27053512  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||  |||||||||| |||| ||||||    
T  27053511 tccctttatccaatgccctaaggacaatgattagtattctc 27053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 57 - 196
Target Start/End: Original strand, 8380432 - 8380571
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||| |    
T  8380432 caaaagtagtatgttttcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttttattttta 8380531  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    ||| |||||||||| || ||||| | ||||||| ||||||    
T  8380532 tccccttatccaataccccaagggccatggttaacattct 8380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 1910234 - 1910374
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||     
T  1910234 tcaaaagtagcatgtttacatttgtttcaacaacattttaacttttaaaaagttaaatttatcatttttcaccattttctaatgttatatttctattttt 1910333  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| |||||| ||||||  |||| ||||| |||||||||||    
T  1910334 atcc-cttatcaaatgccctaagggcaatgattagcattctc 1910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 22521576 - 22521693
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| | |||||||||| |||     
T  22521576 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagttaaatttatcacttctcatcattttccaatgctatatttctagtttt 22521675  T
Q  156 atccacttatccaatgcc 173  Q
    |||| |||||||||||||    
T  22521676 atcctcttatccaatgcc 22521693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 5348087 - 5347950
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||  |    
T  5348087 caaaagtagcatgtttgcattggtttcaaca---ttttgacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttata 5347991  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | | ||||| |||||||  ||||  ||||||||||||||||    
T  5347990 ttcccttattcaatgccctaagggtaatggttagcattctc 5347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 48454907 - 48454800
Alignment:
Q  90 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggtta 189  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||| |||||  ||||||||    
T  48454907 attttgacttttaaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatggtta 48454808  T
Q  190 gcattctc 197  Q
     |||||||    
T  48454807 acattctc 48454800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||| |||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 36279113 - 36279250
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||  |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| |    
T  36279113 caaaagtagcatgtttgcattaatttcaac---attttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttatattttta 36279209  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  |||||||||||| ||||   ||||||||||||||||    
T  36279210 tcctattatccaatgccccaagagtaatggttagcattctc 36279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 29687467 - 29687548
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  29687467 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattcatcacttttcaccattttccaac 29687548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 42222213 - 42222326
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||    
T  42222213 aaaagtaacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaataccatatttctatttttat 42222312  T
Q  158 ccacttatccaatg 171  Q
    || |||||| ||||    
T  42222313 ccccttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 8258756 - 8258621
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||     ||||||||||||| |    
T  8258756 caaaagtagtatgtttgcattggtttcaacaaaattatgactattaaaaagttaaatttatcacttttcaccatttttca-----atatttctattttta 8258662  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||| ||||| ||||| |||| |||| |||||||    
T  8258661 tccccttatccgatgccccaagggcaatagttaacattctc 8258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 41188904 - 41188788
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||| |||| || ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||||| |    
T  41188904 caaatgtagtatgtttgcattgatttcaacagcattttgacttttaaaaagttaaatttatcacctttcaccattttccaatgctatatttatattttta 41188805  T
Q  157 tccacttatccaatgcc 173  Q
    ||| |||||| ||||||    
T  41188804 tcctcttatcaaatgcc 41188788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 46478673 - 46478560
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  46478673 caaaagtaacatatttgcattagtttcaacaatattttaacttttaaaaagttaaatttatca-ttttcactatttttcaatgatatatttctattttta 46478575  T
Q  157 tccacttatccaatg 171  Q
    ||| |||||||||||    
T  46478574 tccccttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 22707053 - 22707179
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||| ||||||  ||||||||| | |||||||||||||| ||||  |||| |||    
T  22707053 tttgcattggtttcaacaacatgttaacttttaaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcc-tttattcaa 22707151  T
Q  170 tgcctcaaggacaatggttagcattctc 197  Q
    |||| ||| | |||||||||||||||||    
T  22707152 tgccccaaaggcaatggttagcattctc 22707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 30538595 - 30538458
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| ||||||||| ||||||||   |||||| |||||||||||||||||||||| ||||||| |||||| ||   |||||||||||||| |    
T  30538595 caaaagtaacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaatttatcatttttcactattttctaatactatatttctattttta 30538499  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||| |||| | ||||||||||| |||||||||||    
T  30538498 tccccttatctaatgtcccaaggacaatgattagcattctc 30538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 49069546 - 49069671
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||| |||||||||||||| || |||| ||||||||||||| |||||||||||||||||||||| |||   |||||||||||||| |    
T  49069546 caaaagtaacatgtttgtattggtttcaacaatatattgatttttaaaaagttagatttatcacttttcaccatttttcaatactatatttctattttta 49069645  T
Q  157 tccacttatccaatgcctcaaggaca 182  Q
    ||  ||||||||||||| ||| ||||    
T  49069646 tcttcttatccaatgccccaaagaca 49069671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 40194818 - 40194886
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40194818 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttca 40194886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 40067033 - 40066920
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || |||| |||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||| |    
T  40067033 caaaagtagtat-tttgtattggttttaacaacatttt-atttttaaaaagttaaatttatcatttttcaccatttttcaatattatatttctattttta 40066936  T
Q  157 tccacttatccaatgc 172  Q
    ||| ||||||||||||    
T  40066935 tccccttatccaatgc 40066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 31626146 - 31626062
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||  |||||||| ||||||    
T  31626146 tttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcatcattttttaatattatatttttatttt 31626062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 43958200 - 43958064
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||| ||| |||||||||||||||  || ||||||||||||||||| |||||||||||| ||||||| |||||| ||   |||||||||||||| ||    
T  43958200 aaaagtaacatgtttgcattggtttcagtaatattttgacttttaaaaaattaaatttatcatttttcacaattttctaatactatatttctatttttat 43958101  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    |  |||||||||||    |||| ||||||||||||||    
T  43958100 cgccttatccaatggtctaagggcaatggttagcatt 43958064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 46042752 - 46042816
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  46042752 tttgcattggtttcaacaacatttagactttaaaaaagttaaatttataacttttcaccattttc 46042816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 30388779 - 30388702
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||||| || |||  |||| |||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  30388779 tcaaaagtagtatgtttatattgatttcaataatattttgacttttaaaaagttaaatttatcatttttcaccatttt 30388702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 10575878 - 10575802
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||||| |||||| |||||  |||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  10575878 tcaaaagtagtatattttcattgaattcaacaatatttggagttttaaaaagttaaatttttcacttttcaccattt 10575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 32204185 - 32204273
Alignment:
Q  69 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||  ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||| ||| |  ||||||||||||||||    
T  32204185 atttgcattgtattcaaaaatattttaacttttaaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctattttcat 32204273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 18529271 - 18529175
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    ||||| |||||| |||||| | | |||||||||||||||||||  ||||| ||||||| |||||||||||||||||   ||| | ||||||||||||    
T  18529271 caaaattagcatgtttgcaatagattcaacaacattttgacttgaaaaaaattaaattcatcacttttcaccatttcataacataatatttctattt 18529175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 44297019 - 44296945
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 131  Q
    |||||||||||  ||| |||||| |||||| | ||||| ||||||||||| ||||||| ||||||||||||||||    
T  44297019 caaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 44296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 6548520 - 6548601
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||| |  |||||||||| | |||||| ||||| ||||||||||||||||||| |||| |||||||| ||| ||||    
T  6548520 tcaaaagtagtaagtttgcattggatccaacaatattttaacttttaaaaagttaaattcatcatttttcaccgtttcccaa 6548601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 16082550 - 16082473
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    ||||||||| || |||||||||| |||||||| |  || |||||||||| |||||||| |||| ||||||||||||||    
T  16082550 caaaagtagtatgtttgcattggattcaacaataacttaacttttaaaacgttaaattcatcaattttcaccattttc 16082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 48879660 - 48879741
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||||||||||| ||||   |||||||| ||||| ||||||||||| |||||||  ||||||||||| |||| ||||    
T  48879660 tcaaaagtagcatatttacattaaattcaacaatattttaacttttaaaaaattaaattcttcacttttcactatttcccaa 48879741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 4686127 - 4686085
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  4686127 ttttaacttttaaaaagttaaattaatcacttttcaccatttt 4686085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 16931906 - 16931961
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| |||||||||||||||||||||||||  |||||||| || |||||||||    
T  16931906 ttcaacaatattttgacttttaaaaagttaaattattcactttt-actattttccaa 16931961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 16937289 - 16937344
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| |||||||||||||||||||||||||  |||||||| || |||||||||    
T  16937289 ttcaacaatattttgacttttaaaaagttaaattattcactttt-actattttccaa 16937344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 35003637 - 35003673
Alignment:
Q  98 ttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35003637 ttttaaaaagttaaattaatcacttttcaccattttc 35003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 40774336 - 40774264
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    |||| ||| ||||| ||||||||||||||||||| |||| |||||| |||||| ||| |  ||||||||||||    
T  40774336 ttcatcaatattttaacttttaaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctattt 40774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 5543061 - 5543112
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    ||||||||  |||| ||||||||||||| |||| ||||||||||||||||||    
T  5543061 ttcaacaattttttaacttttaaaaagtcaaatatatcacttttcaccattt 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 41141040 - 41141095
Alignment:
Q  82 tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||  |||||| ||||||||||||||||| |  |||||||||||||||||||    
T  41141040 tcaacaattttttgatttttaaaaagttaaattaacaacttttcaccattttccaa 41141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 43189731 - 43189685
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcac 127  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||||    
T  43189731 ttcaacaatattttaacttttaaaaagtcaaattcatcacttttcac 43189685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 3720198 - 3720157
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||| |||||||||||||||||||||||| ||| ||||||||    
T  3720198 ttttaacttttaaaaagttaaatttatcattttacaccattt 3720157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 29247938 - 29248010
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||  ||||||||||||||||||| ||||  |||||||||| | |||||||| || || ||||||||||    
T  29247938 ttcaacaatgttttgacttttaaaaagtt-aattcttcacttttcatcgttttccaatgtaatgtttctatttt 29248010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 35239873 - 35239780
Alignment:
Q  89 cattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggaca 182  Q
    |||||| ||||||||||||||||||| ||||| ||| | |||||| ||||   |||||| || ||| |||| |||||| |||||| ||| ||||    
T  35239873 cattttaacttttaaaaagttaaattcatcacgttttatcatttttcaacaccatatttttacttttatcctcttatcaaatgccccaaagaca 35239780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 290; Significance: 1e-162; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 417 - 762
Target Start/End: Original strand, 42911328 - 42911673
Alignment:
Q  417 aattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatgctcttgc 516  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  42911328 aattgatttatgcttctgaagctagtgaattttatgcatgttactattgggtgatatgaatgcagatatctgctgttgctcggattcggaatgctcttgc 42911427  T
Q  517 ttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaatgtttcaa 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42911428 ttatgctacacatacatttttcaacaagcatgggtttctttatgtgcacacgccaattgtcacgactagtgattgtgagggtgctggtgaaatgtttcaa 42911527  T
Q  617 gtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatctgatgttgaagctgctaagcttgttgttc 716  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  42911528 gtgacaactttgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctccaactgaagctgatgttgaagctgctaagcttgttgttc 42911627  T
Q  717 aggagaagggggaggttgtttcacaattaaaaactgcagaagcaga 762  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||||    
T  42911628 aggagaagggggaggttgtttcacaattgaaatctgcaaaagcaga 42911673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 21016176 - 21016035
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||     
T  21016176 tcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttaaccatttttcaatgttatatttctattttt 21016077  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||| ||||||| | |||||||||||||||||    
T  21016076 atccccttatccaaagcctcaaaggcaatggttagcattctc 21016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 19389429 - 19389288
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||     
T  19389429 tcaaaagtagcatgtttgcattgttttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttt 19389330  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  19389329 atccccttatccaatgccccaagggcaatggttagcattctc 19389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 45337995 - 45338135
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |    
T  45337995 caaaagtagtatgtttgcattggtctcaataacattttgatttttaaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattttta 45338094  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||  ||||||||||||||||||||||    
T  45338095 tccccttatccaatgcccaaaggacaatggttagcattctc 45338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 6939152 - 6939289
Alignment:
Q  60 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 159  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||     
T  6939152 aagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatct 6939251  T
Q  160 acttatccaatgcctcaaggacaatggttagcattctc 197  Q
      |||| ||||||| || ||||||||||||||||||||    
T  6939252 cattattcaatgccccatggacaatggttagcattctc 6939289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 4989926 - 4990064
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||||||||||   |||||||| ||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||     
T  4989926 tcaaaagtagcatgtttgcattggtttcaac---attttgacatttaaaaagttaaatttatcatttttcactattttccaatgctatatttctattttt 4990022  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||  ||||||||||| |||||||||||    
T  4990023 atccccttatccaatgctacaaggacaatgattagcattctc 4990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 65 - 194
Target Start/End: Original strand, 21016233 - 21016362
Alignment:
Q  65 gcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactta 164  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||| |||| ||||    
T  21016233 gcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  165 tccaatgcctcaaggacaatggttagcatt 194  Q
    ||||| ||| ||| | ||||||||||||||    
T  21016333 tccaaagccccaaaggcaatggttagcatt 21016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 26195490 - 26195383
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||    
T  26195490 aaaagtagcatgtttgtattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttat 26195391  T
Q  158 ccacttat 165  Q
    || |||||    
T  26195390 ccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 10694798 - 10694938
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||   ||||||| |||||| |    
T  10694798 caaaagtatcatatttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttaaatactatatttttattttaa 10694897  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||| |  |||||| |||| |||||||||||    
T  10694898 tccccttatccaatacaccaaggataatgattagcattctc 10694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 25249453 - 25249345
Alignment:
Q  63 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 162  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| | || ||    
T  25249453 tagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttaccccct 25249354  T
Q  163 tatccaatg 171  Q
    |||||||||    
T  25249353 tatccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 42910826 - 42910974
Alignment:
Q  262 tgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatccttaaaattaacaaaatttagaaatgatctctaaaattcatacttccctgtc 361  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||        |||||||||||    
T  42910826 tgaaccatcaatttcgtttttgaaaatgtagagttaaacaattccatcctt-aaattaacaaaattttgaaatgatctcta--------acttccctgtc 42910916  T
Q  362 tcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaaatagactaat 419  Q
    |||  ||| ||||  |||||| ||||||||||||||||||||||||||||||| ||||    
T  42910917 tcatatgttccttcaagacaatttcaaaaactaaattgatcaatccaaatagattaat 42910974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttctatttttatccccttatccaa 8018864  T
Q  170 tg 171  Q
    ||    
T  8018865 tg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 18068953 - 18069062
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||  || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  18068953 caaaagtataatgtttgcattagtttcaacaacattttgacctttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta 18069052  T
Q  157 tccacttatc 166  Q
    ||| ||||||    
T  18069053 tccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 26672799 - 26672920
Alignment:
Q  75 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 174  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||| | |||||||||| | |||||||||||||| ||||  ||||||||| ||     
T  26672799 attggtttcaacaacattttgacttttaaaaaattaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaatacc- 26672897  T
Q  175 caaggacaatggttagcattctc 197  Q
    |||||||||||||||||||||||    
T  26672898 caaggacaatggttagcattctc 26672920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 37433258 - 37433392
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    |||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||||||| || ||||| ||    
T  37433258 aaaagtagtatgtttgcattggtttcaacaacattttaacttt-aaaaagttaaatttatcacttttcatcatttttcaatgttatatgtcgatttttat 37433356  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    || |||||||||| || |||  |||||||||||||||    
T  37433357 ccccttatccaatacc-caaaaacaatggttagcatt 37433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 34714040 - 34713899
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca--acgttatatttctattt 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||  ||  ||||| |||||||    
T  34714040 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagtgaaatttatcactttgcaccatttttcaatactatatatatctattt 34713941  T
Q  154 tcatccacttatccaatgcctcaaggacaatggttagcattc 195  Q
    | |||| ||||| ||||    | |||||||||||||||||||    
T  34713940 ttatccccttattcaatattcctaggacaatggttagcattc 34713899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 44874324 - 44874456
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||| |    
T  44874324 caaaagtagcatgtttgcattggtttcaacaac--------ttttaaaaatttaaatttatcacttttcaccatttttcaatgttatatttatattttta 44874415  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||| |||| ||||||  |||| ||||||    
T  44874416 tccccttatccaatgcttcaaagacaataattagaattctc 44874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 5129582 - 5129434
Alignment:
Q  55 ttcaaaagtagcatatttgcattggtt------tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttc 148  Q
    ||||||||||||||||||| |||||||      | | ||||||||||||||||||||| ||||||||||||||||||| |||||| ||| | ||||||||    
T  5129582 ttcaaaagtagcatatttgtattggttaacattttatcaacattttgacttttaaaaaattaaatttatcacttttcatcatttttcaatgctatatttc 5129483  T
Q  149 tattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
     ||||| |||| |||||| |||||   |||| |||||||||||||||||    
T  5129482 aatttttatccccttatcaaatgctctaagggcaatggttagcattctc 5129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 3174447 - 3174589
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattt----tgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 152  Q
    |||||||||||| |||| |||||||||||||||||||    ||||||||||||||| |||||||| | |||||||||||||||||  | |||||||||||    
T  3174447 caaaagtagcatgtttgtattggtttcaacaacatttattttgacttttaaaaagtcaaatttataatttttcaccattttccaatataatatttctatt 3174546  T
Q  153 ttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||| || |||||| |||  |  |||||||||||||||||||    
T  3174547 tttatcccctcatccaacgcccta--gacaatggttagcattctc 3174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 755 - 846
Target Start/End: Original strand, 42911546 - 42911636
Alignment:
Q  755 gaagcagaaaggttgggagaaggaacagatacagaatcctcctcctactgaatctaatgttgaagctgctaagcttgttgctcaggagaagg 846  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||||    
T  42911546 gaagcagagaggttgg-agaaggaactgatacagaatcctcctccaactgaagctgatgttgaagctgctaagcttgttgttcaggagaagg 42911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 6433535 - 6433643
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |||||| |    
T  6433535 caaaagtagtatctttgcattggttttaacaatattttaacttttaaaaagttaaatttataactttttaccatttttcaatgctatatttttattttta 6433634  T
Q  157 tccacttat 165  Q
    | |||||||    
T  6433635 ttcacttat 6433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 33741593 - 33741523
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  33741593 tcaaaagtaacatatttgcattggtttcaacaatattttaacttttaaaaagttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 14855502 - 14855394
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||| |||||||| |||||  ||   |||||||||||||| |    
T  14855502 caaaagtagcatgtttgcattagttttaacaacattttaacttttaaaatgttaaatttatctcttttcactattttttaatactatatttctattttta 14855403  T
Q  157 tccacttat 165  Q
    ||| |||||    
T  14855402 tccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 847 - 930
Target Start/End: Original strand, 42911676 - 42911759
Alignment:
Q  847 agaaggagattactgctgctgtggatgaacttaaaaaggctaaacggaatgtatccaagctggaagaaagatctaaacttcagc 930  Q
    |||||||||||| ||||||||||| |||||||||||| || |||   ||||||||||||||||| |||||||||||||||||||    
T  42911676 agaaggagattagtgctgctgtggctgaacttaaaaaagcaaaagaaaatgtatccaagctggaggaaagatctaaacttcagc 42911759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  79 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactta 164  Q
    ||||||| || ||||| |||||||||||||||||||||||| |||| || ||||| |||  ||||||||||||||| |||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaatttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 35930168 - 35930267
Alignment:
Q  98 ttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||||||||||||| | |||||| |||||| |||   ||||||| |||||| |||  ||||||||||||  ||||| ||||||||| |||||||    
T  35930168 ttttaaaaagttaaatttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaagggcaatggttatcattctc 35930267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 6396392 - 6396278
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||| ||| ||||||| ||| | |||||||||||||| || ||||||| |||||||| || ||| ||||||||||| ||||   |||||| |||||      
T  6396392 tcaaaattagtatatttgtattagattcaacaacattttaacgtttaaaatgttaaattcattactcttcaccattttacaacacaatatttttatttat 6396293  T
Q  156 atccacttatccaat 170  Q
    ||||||||| |||||    
T  6396292 atccacttaaccaat 6396278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 20212507 - 20212433
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 131  Q
    |||||||||||  ||| |||||| |||||| | ||||| ||||||||||| ||||||| ||||||||||||||||    
T  20212507 caaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 20212433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 7532815 - 7532892
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    |||||||||||  |||||| ||||||||||||||||||||||    ||||||||||||| |||| |||| ||||||||    
T  7532815 acttttaaaaacctaaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgcc 7532892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 38869995 - 38870092
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||| |||||| |||||  |||| ||| |||||||||||||||| ||| ||||  |||||||||| |||||||||| |  || ||||||||||    
T  38869995 caaaagtagtatatttacattgaattcatcaatattttgacttttaaaatgttgaattcttcacttttcatcattttccaatgcaatgtttctatttt 38870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 37923046 - 37922972
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| || |||||||||| ||||| || |||||||||| |||||||||||||| || |||||| ||||||||    
T  37923046 aaaagtagtatgtttgcattggattcaataatattttgacttctaaaaagttaaattcattactttt-accatttt 37922972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 31596512 - 31596442
Alignment:
Q  84 aacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||| ||||||||||||||||||| ||||| |||| |||||||||||||  |||   |||||||||||||    
T  31596512 aacaatattttgacttttaaaaagtaaaattcatcatttttcaccattttttaacacaatatttctatttt 31596442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 11332909 - 11332796
Alignment:
Q  60 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 159  Q
    |||||| ||||||  ||||  ||||||||  ||||||||||||||||||||||||  ||||||| ||||||||  |||    ||||||||||||| |||     
T  11332909 aagtagtatatttatattgaattcaacaatgttttgacttttaaaaagttaaattcttcactttacaccatttctcaatacaatatttctatttttatct 11332810  T
Q  160 acttatccaatgcc 173  Q
     |||| ||||||||    
T  11332809 tcttaaccaatgcc 11332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 39972270 - 39972190
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||| ||| || |||||||||  || |||||  |||| ||||||||||||| ||||| ||||||||||||||||| ||||    
T  39972270 caaaaatagtatgtttgcattgaattgaacaattttttaacttttaaaaagtcaaattcatcacttttcaccatttcccaa 39972190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 19976545 - 19976471
Alignment:
Q  121 ttttcaccattttccaacgttatatttctattttcatcc-acttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||||||||||||| |||  ||||||||||| ||| |||| |||||||||| ||| ||| | ||||||||||||||    
T  19976545 ttttcaccatttttcaatattatatttctacttttatcccacttatccaaagccccaaaggcaatggttagcatt 19976471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 30351595 - 30351637
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaa 112  Q
    |||||||||| |||||||| ||||| |||||||||||||||||    
T  30351595 tttgcattggattcaacaatattttaacttttaaaaagttaaa 30351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 11295548 - 11295507
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  11295548 ttttgacttttaaaaagttaaattcatcatttttcatcattt 11295507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 17320045 - 17320000
Alignment:
Q  84 aacaacattttgacttttaaaaagttaaatttatcacttttcacca 129  Q
    ||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  17320045 aacaatattttaacttttaaaaagttaaattcatctcttttcacca 17320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 42910722 - 42910759
Alignment:
Q  10 gaattaagatacatctttattggaaattaccaaatact 47  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42910722 gaattaagatgcatctctattggaaattaccaaatact 42910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 34874558 - 34874698
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |    
T  34874558 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgctatatttctattttta 34874657  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| ||||| |||||||||||||||||    
T  34874658 tccccttatccaatgccccaagggcaatggttagcattctc 34874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 27209836 - 27209696
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
T  27209836 caaaagtaggatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcaattttcaccattttccaatgttatatttctattttta 27209737  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  |||||||||||| |||||||||||||||||||||||    
T  27209736 tccctttatccaatgccccaaggacaatggttagcattctc 27209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 28851025 - 28850885
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  28851025 tcaaaagtagcatatttgcattggtttcaacaat-ttttgacttttaaaaagttaaatttatcacttttcaccattttccaatgttatatttctattttt 28850927  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || | |||||| |||||| ||||| |||||||||||||||||    
T  28850926 attctcttatctaatgccccaagggcaatggttagcattctc 28850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 41147594 - 41147453
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| ||| | ||||||||||||||     
T  41147594 tcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattaatcattttttaccatttttcaatgctatatttctattttt 41147495  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  41147494 atccccttatccaatgccccaaggacaatggttagcattctc 41147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 11385972 - 11386112
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||| |    
T  11385972 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaatttttaccattttccaatgctatatttctattttta 11386071  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||| |||| | ||||||||||||| |||||||||    
T  11386072 tccaattatctaatgtcccaaggacaatggtgagcattctc 11386112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 47655486 - 47655346
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| ||||||||| |    
T  47655486 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaattttcaccatttttcaatgctatacttctattttta 47655387  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||| ||||| || |||| |||||||||||||||||    
T  47655386 tccccttattcaatgtcttaagggcaatggttagcattctc 47655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 49508848 - 49508712
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |    
T  49508848 caaaagtagcatgtttgcattggtttcgacaatattttgacttttaaaaagttaaatttatcac-tttcaccattttccaatgctatatttctattttta 49508750  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||| ||||||||||||| ||||| ||||||||| ||||    
T  49508749 tccccttatccaatgccccaagggcaatggttaacatt 49508712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 22346352 - 22346212
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||   |||||||||||||| |    
T  22346352 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaaattaaatttatcacttttcaccatttttcaatactatatttctattttta 22346253  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | | ||||||||| ||| ||||| |||||||||||||||||    
T  22346252 ttcccttatccaaagccccaagggcaatggttagcattctc 22346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 33929957 - 33930097
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| | ||||||| |||||| |    
T  33929957 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcagttttcactatttttcaatgctatatttatattttta 33930056  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||  ||||| ||||||||||| |||||||    
T  33930057 tccccttatccaatatctcaaagacaatggttaacattctc 33930097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 42607438 - 42607299
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| |||||| ||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttat 42607339  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||||||||| ||  |||| ||||||||| |||||||    
T  42607338 ccccttatccaataccctaagggcaatggttaacattctc 42607299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 2125823 - 2125682
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| |||  ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||     
T  2125823 tcaaaagtaacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaatttatcacttttcacaatttttcaatgctatatttctattttt 2125724  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||| |||| ||||||||||||||||||    
T  2125723 atccccttatccaatgccccaagaacaatggttagcattctc 2125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 11385908 - 11385785
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |||||||||||||| |||| ||||||||||||     
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgct 11385809  T
Q  174 tcaaggacaatggttagcattctc 197  Q
     ||||| ||||||| |||||||||    
T  11385808 gcaagggcaatggtcagcattctc 11385785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 932271 - 932135
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||| | |||||||||||||| ||    
T  932271 aaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaaattaaatttataatttttcatcattttccaatgctatatttctatttttat 932172  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    || ||||||||||||| |||| |||||| ||| ||||    
T  932171 ccccttatccaatgccccaagaacaatgattaacatt 932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 24140764 - 24140903
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||   |||||||||||||| |    
T  24140764 caaaaatagcatgtttgcattggtttcaacaacattttgactttaaaaaagttaagtttatcacgtttcaccattttccaatagtatatttctattttta 24140863  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||| ||||||| ||| | |||||||||||||||||    
T  24140864 tccccttat-caatgccccaaaggcaatggttagcattctc 24140903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 32213988 - 32213864
Alignment:
Q  73 gcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgc 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||| ||||     
T  32213988 gcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatgt 32213889  T
Q  173 ctcaaggacaatggttagcattctc 197  Q
    | ||||  |||||||||| ||||||    
T  32213888 cccaagagcaatggttagtattctc 32213864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 7190589 - 7190450
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||  || | |||||||||||||| ||    
T  7190589 aaaagtagcatgtttgcattagtttcaacaccattttaacttttaaaaagttaaatttatcacttttcatcatttttgaatgctatatttctatttttat 7190490  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||| |||||||| ||||| ||| |||||||||||||    
T  7190489 cctcttaaccaatgccccaagggcaaaggttagcattctc 7190450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 4940855 - 4940715
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| |||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |    
T  4940855 caaaaatagcatgtttgtattggttttaacaatattttgacttttaaaaagttaaatttatcacttttaaccattttccaatgctatatttctattttta 4940756  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||  | |   |||||||||||||||||    
T  4940755 tccccttatccaatgcgcctaaagcaatggttagcattctc 4940715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 40845255 - 40845379
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||   |||||||||||||| |||| ||||| |||    
T  40845255 tttgctttggtttcaacaatattttgatttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccccttattcaa 40845354  T
Q  170 tgcctcaaggacaatggttagcatt 194  Q
    || ||||||| ||||||||||||||    
T  40845355 tgtctcaagggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 43433766 - 43433906
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||   |||||||||||||| |    
T  43433766 caaaagtagtatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttttaatactatatttctattttta 43433865  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| ||||  |||| ||||||||||||    
T  43433866 tccccttatccaatgccccaagagcaatagttagcattctc 43433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 50295550 - 50295408
Alignment:
Q  56 tcaaaagtagcatattt-gcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  50295550 tcaaaagtagcatgttttgcattgatttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatactatatttctatttt 50295451  T
Q  155 catccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
     | || ||||||||||||| ||| ||| ||| ||| |||||||    
T  50295450 tacccccttatccaatgccccaaagacgatgattaacattctc 50295408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 6170667 - 6170546
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| | ||||||||||||||     
T  6170667 tcaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttctctattttccaatgctatatttctattttt 6170568  T
Q  156 atccacttatccaatgcctcaa 177  Q
    |||   ||||||||| ||||||    
T  6170567 atctctttatccaatacctcaa 6170546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 49901917 - 49902030
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||| |    
T  49901917 caaaagtatcatgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaatttatcacttttcaccattttccaatactatatttctattttta 49902016  T
Q  157 tccacttatccaat 170  Q
    ||| ||||||||||    
T  49902017 tcctcttatccaat 49902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 28277598 - 28277484
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||     
T  28277598 tcaaaagtaacatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcactttttatcatttttcaatgttatatttctattttt 28277499  T
Q  156 atccacttatccaat 170  Q
    |||| ||||||||||    
T  28277498 atcctcttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 29966812 - 29966954
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||  |||||||||||| ||||  ||||||| ||| | ||||||| ||||||    
T  29966812 tcaaaagtagcatgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttt 29966911  T
Q  155 catccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
     |||| ||||||||||||  ||||||||||||||| |||||||    
T  29966912 tatccccttatccaatgctccaaggacaatggttaacattctc 29966954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 31975491 - 31975618
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||||||| ||||||| | |||||| ||| |||||||||||||||  |||   ||||||||    
T  31975491 tttgcattagttttaacaatattttgatttttaaaaagttaaatttaccactttttatcatttttcaatgttatatttctatttatatctctttatccaa 31975590  T
Q  170 tgcctcaaggacaatggttagcattctc 197  Q
    | |||||||| |||||||||||||||||    
T  31975591 tacctcaagggcaatggttagcattctc 31975618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 45721745 - 45721882
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||| ||| ||||   |||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||     
T  45721745 tcaaaagtagcatgtttgcattgattttaaca---ttttgatttttaaaaagttaaatttatcagtttttaccattttccaatgttatatttttattttt 45721841  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||  ||||| ||||||||||| |||||    
T  45721842 atcaccttatccaatgctccaagg-caatggttagccttctc 45721882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 52396435 - 52396551
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    |||| |||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||||||| | |||||| |||   |||||||||||||| ||    
T  52396435 aaaaatagcatgtttgcatttgtttcaataatattttgacttttaaaaagttaaatttatcactttt-atcatttttcaatactatatttctatttttat 52396533  T
Q  158 ccacttatccaatgcctc 175  Q
    || |||||||||||||||    
T  52396534 ccccttatccaatgcctc 52396551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 5945447 - 5945551
Alignment:
Q  93 ttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagca 192  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| || ||||||||||||| ||    |||||||||||  ||||||||||||||||||    
T  5945447 ttgacttttaaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaaggacaatggttagca 5945546  T
Q  193 ttctc 197  Q
    |||||    
T  5945547 ttctc 5945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||| ||   |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaatttatcactttttactattttccaatgttatatttttatttttatttccttatccaa 4656119  T
Q  170 tg 171  Q
    ||    
T  4656120 tg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 50154464 - 50154604
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| | |||||| ||| | ||||||| |||||| |    
T  50154464 caaaagtaacatgtttgcattggtttcaacaacattttaacttttaaaaggttaaatttatcattttttatcatttttcaatgctatatttatattttta 50154563  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||   ||||| |||    ||| |||||||||||||||||||    
T  50154564 tctttttatctaataatccaatgacaatggttagcattctc 50154604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 26469696 - 26469584
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    |||||||| || ||| |||||||||||| || |||||||||||||||||||||||||||||| ||||||  ||||| ||| | ||||||| |||||| ||    
T  26469696 aaaagtagtatgttttcattggtttcaataatattttgacttttaaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttat 26469597  T
Q  158 ccacttatccaat 170  Q
    ||  |||||||||    
T  26469596 ccctttatccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 47895325 - 47895401
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| ||| |||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  47895325 caaaagtaacatgtttgcattagtttcaacaatattttgacatttaaaaagttaaatttatcacctttcaccatttt 47895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 30222613 - 30222689
Alignment:
Q  59 aaagtagcatatttgcattggtttcaacaacattttgac-ttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| || |||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttc 30222689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 44286864 - 44287003
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||| ||| ||||||||||||| || || ||||| | |||||||||||||||||||||| ||||||| ||| || ||   | ||||| |||||| ||    
T  44286864 aaaagtaacatgtttgcattggttttaataatattttaatttttaaaaagttaaatttatcatttttcactattctctaatactgtatttttatttttat 44286963  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||  ||||  |||||| |||||| ||| ||||||||||||    
T  44286964 ccttttatataatgccccaaggataatagttagcattctc 44287003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 40920188 - 40920292
Alignment:
Q  69 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttat--cacttttcaccattttccaacgttatatttctattttcatccacttatc 166  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||| ||  |||||||||||| ||  ||| |  ||||||||||||| |||| |||| |    
T  40920188 atttgcattggattcaacaatattttaacttttaaaaagttaaattaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaac 40920287  T
Q  167 caatg 171  Q
    |||||    
T  40920288 caatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 43168131 - 43168212
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||| |||||| |||||  ||||||||  |||||||||||||||||||||| |  |||||||||||||||| ||||    
T  43168131 tcaaaagtagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaactcttcacttttcaccatttcccaa 43168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 17402963 - 17403015
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaattcatcactttttaccatttt 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 44359787 - 44359712
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||||||||  ||||||||||||||||    
T  44359787 caaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcacttttcaccattt 44359712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 41492913 - 41493021
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    ||||||| || |||| ||| ||||| |||||||||| || ||||| |||||||||||||| || |||| |  ||||||||||||| |||| |||| ||||    
T  41492913 tttgcatgggattcatcaatattttaacttttaaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctatttt-atcctcttaaccaa 41493011  T
Q  170 tgcctcaagg 179  Q
    ||||| ||||    
T  41493012 tgccttaagg 41493021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 48938627 - 48938703
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    ||||||||| |||||| ||||   ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||    
T  48938627 caaaagtagtatatttacattaaattcaacaatgttttgacttttaaaaag-taaatttttcacttttcaccattttc 48938703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 14331828 - 14331908
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  14331828 caaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcatttttcaccatttcccaa 14331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 41898950 - 41898898
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaattcatcactttttaccatttt 41898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 8892885 - 8892806
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| ||||||  ||||  || |||||  ||||||||||||||||||||||||  | |||||||||||||||||||    
T  8892885 aaaagtagtatatttatattgaatttaacaatgttttgacttttaaaaagttaaattctttacttttcaccattttccaa 8892806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 8244128 - 8244219
Alignment:
Q  102 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatgg-ttagcattct 196  Q
    |||||||||||||||||| | |    |||||||||| ||||||||||||| || |||| ||||||||||||| ||||  |||||| ||||||||||    
T  8244128 aaaaagttaaatttatcattat----cattttccaatgttatatttctatatttatccccttatccaatgccccaagagcaatggattagcattct 8244219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 51046731 - 51046678
Alignment:
Q  85 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||| ||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  51046731 acaactttttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 51046678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 894960 - 895016
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 152  Q
    |||||||||||||| |||| |||||||||||| | |||||||| | |||||||||||    
T  894960 acttttaaaaagttgaattcatcacttttcacaactttccaacataatatttctatt 895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 46296276 - 46296240
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttat 117  Q
    |||||||| ||||||||||||||||||||||||||||    
T  46296276 ttcaacaatattttgacttttaaaaagttaaatttat 46296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 44043500 - 44043547
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  44043500 ttttgacttttaaaaagttaaatatatcactttttaccactttacaac 44043547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 16691309 - 16691407
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaagg 179  Q
    ||||||||  ||||||||||||||||||||||||  ||| |||| ||||||| ||||    || |||||||||| |||  |||| |||||||| |||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattcttcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaagg 16691407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 27210750 - 27210792
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  27210750 ttttaacttttaaaaagttaaattgatcatttttcaccatttt 27210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 28615743 - 28615785
Alignment:
Q  377 agacaaattcaaaaactaaattgatcaatccaaatagactaat 419  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  28615743 agacaatttcaaaaactaaattgatcaatctaaagagactaat 28615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 6e-52; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 26040478 - 26040338
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||| |    
T  26040478 caaaagtagcatatttgcattggcttcaacaatattttgacttttaaaaagttaaacttatcacttttcaccattttccaatactatatttctattttta 26040379  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| |||||||||||||||||||||||    
T  26040378 tccccttatccaatgccccaaggacaatggttagcattctc 26040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 35808514 - 35808374
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||| |    
T  35808514 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcacaattttccaatgctatatttctattttta 35808415  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| ||||| |||||||||||||||||    
T  35808414 tccccttatccaatgccccaagggcaatggttagcattctc 35808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 41956331 - 41956191
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  41956331 caaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 41956232  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||| ||||| ||||| |||||||||||||||||    
T  41956231 tcctcttatccgatgccccaagggcaatggttagcattctc 41956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 55669730 - 55669870
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |    
T  55669730 caaaagtagcatgtttgcattgtttttaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatgctatatttctattttta 55669829  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| ||||| |||||||||||||||||    
T  55669830 tccccttatccaatgccccaagggcaatggttagcattctc 55669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 34016629 - 34016756
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  34016629 tttgcattgatttcaacaacattttgacttttaaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatccccttatccaa 34016728  T
Q  170 tgcctcaaggacaatggttagcattctc 197  Q
    || |||||||||||||||||||||||||    
T  34016729 tgtctcaaggacaatggttagcattctc 34016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 50514731 - 50514592
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |    
T  50514731 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttttcaatgttatatttctatttt-a 50514633  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||| | ||||  |||||||||||||||||    
T  50514632 tcctcttatccaatgtcacaagagcaatggttagcattctc 50514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 23765570 - 23765709
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||    
T  23765570 aaaagtagcatgtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttcaatttttat 23765669  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||||| |||||  ||| | |||||||||||||||||    
T  23765670 ccccttatctaatgcaccaaaggcaatggttagcattctc 23765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 45688734 - 45688871
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||| |||||||||| |    
T  45688734 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatgctatgtttctattttta 45688833  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||| |||||||||| || |||| |||||||||||||||    
T  45688834 tccccttatccaataccccaagaacaatggttagcatt 45688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 31754928 - 31755069
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||   ||||||| ||||||     
T  31754928 tcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcatttttcaattctatatttatattttt 31755027  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| |||||||||| || ||| | |||||||||||||||||    
T  31755028 atccccttatccaataccccaatggcaatggttagcattctc 31755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 34316841 - 34316700
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| ||||||     
T  34316841 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatattttt 34316742  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||| ||||| ||||||| |||||||||    
T  34316741 atctccttatccaatgccccaagggcaatggtgagcattctc 34316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 54339103 - 54339243
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||| ||||||     
T  54339103 tcaaaagtagcatatttacattggtttcaaaaatattttgacttttaaaaaattaaatttatca-ttttcaccatttttcaatgttatatttatattttt 54339201  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||  |||||||||||| ||| |||||||||||||||||||    
T  54339202 atccctttatccaatgccccaacgacaatggttagcattctc 54339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 20811254 - 20811394
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |    
T  20811254 caaaagtagcatgtttgcattgattttaacaacattttgacttttaaaaagttaaatttatcacttttcaccaatttccaatgttatatttctattttta 20811353  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||  ||| || ||| | |||| ||||||||||||    
T  20811354 tccccttatttaataccccaaaggcaatagttagcattctc 20811394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 26831904 - 26831764
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||| ||||||||||||||| | |||||||||| |||||||||||||||| |||||||| |||  |||||||||||||||     
T  26831904 tcaaaagtagcatgtttgcattg-tttcaacaacattttaatttttaaaaagataaatttatcactttttaccattttacaatattatatttctattttt 26831806  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||    
T  26831805 atcctcttattcaatgccccaaggacaattgttagcattctc 26831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 27839425 - 27839284
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||| |||||| ||||||||||||| || |||||||||||||||||||| |||||||||||| |||||| |||||| ||| | ||||||||||||||     
T  27839425 tcaaaaatagcatgtttgcattggttttaataacattttgacttttaaaaacttaaatttatcatttttcatcatttttcaatgctatatttctattttt 27839326  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || | ||||||||||||| ||||| |||||||||||||||||    
T  27839325 attcccttatccaatgccccaagggcaatggttagcattctc 27839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 2362619 - 2362762
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag--ttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||   ||||||| |||||    
T  2362619 tcaaaagtagtatgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttattt 2362718  T
Q  154 tcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | |||| ||||||| ||||| ||||| |||||||||||||||||    
T  2362719 ttatccccttatccgatgccccaagggcaatggttagcattctc 2362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 10100231 - 10100091
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||| |||||| |    
T  10100231 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttctaatattatatttatattttta 10100132  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||| ||| | |||||||||| |  |||||||||    
T  10100131 tccccttatccgatgtcccaaggacaatagacagcattctc 10100091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 51266914 - 51267055
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||     
T  51266914 tcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctattttt 51267013  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  |||||||||||   ||||  ||||||||||| |||||    
T  51267014 atctccttatccaatgttccaagagcaatggttagccttctc 51267055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 19329046 - 19328950
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||    
T  19329046 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 32131134 - 32131273
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||| ||    
T  32131134 aaaagtaacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttat 32131233  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |   ||||||||||   ||||| ||||||||| |||||||    
T  32131234 ctctttatccaatgttccaagggcaatggttaacattctc 32131273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 31168125 - 31168265
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | || | ||||||||| |    
T  31168125 caaaagtagaatgtttacattggtttcaacaacattttgactttaaaaaaattaaatttatcacttttcaccattttccaatgctaaaattctattttta 31168224  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||| || |||||  ||||| |||| ||||||||||||    
T  31168225 tccccttgtctaatgctccaagggcaatagttagcattctc 31168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 30475416 - 30475554
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||   ||||||| |||||| |    
T  30475416 caaaagtaatatgtttgcattggtttcaacaatattttgacatttaaaaagttaaatttatcacttttcaccatttttcaatactatatttttattttta 30475515  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattc 195  Q
    ||  |||||||||| ||  |||| |||||||||||||||    
T  30475516 tctccttatccaataccctaagggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 47188783 - 47188703
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  47188783 caaaagtagcatgtttgcattggtttcaacaacattttgactttttagaagttaaatttatcacttttcaccattttccaa 47188703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 33951691 - 33951804
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| || ||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||   |||||||||||||| |    
T  33951691 caaaattaacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttta 33951790  T
Q  157 tccacttatccaat 170  Q
    ||| ||||| ||||    
T  33951791 tccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 52341592 - 52341688
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    ||||| ||| || |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| | ||||||||||||    
T  52341592 caaaattagtatgtttgcattggattcaacaacattttgacttttaaaaagttaaattcatcatttttcatcattttccaacataatatttctattt 52341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 19876257 - 19876161
Alignment:
Q  101 taaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||||||||||||||||||||||||| |||||||||   |||||||||||||| |||| |||||||||||| ||||||  ||| ||||||||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgcttcaagggtaattgttagcattctc 19876161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 51290473 - 51290561
Alignment:
Q  109 taaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||| |||| ||||||||||| | |||||||||||||||||||||||    
T  51290473 taaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctc 51290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 53567072 - 53566935
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttat---cacttttcaccattttccaacgttatatttctatt 152  Q
    ||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||    |||||| || ||||| ||| | ||||||||||||    
T  53567072 tcaaaagtagcatgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatt 53566973  T
Q  153 ttcatccacttatccaatgcctcaaggacaatggttag 190  Q
    || |||   ||| |||||||| ||| ||||||||||||    
T  53566972 tttatctctttaaccaatgccccaaagacaatggttag 53566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 35675309 - 35675186
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||||||| || |||||||||  |||||||| ||||| ||||||||||||||||||| |||||||||||| |||| ||||    |||||||||||||     
T  35675309 tcaaaagtagtatgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcactatttcccaatacaatatttctattttt 35675210  T
Q  156 atccacttatccaatgcctcaagg 179  Q
    |||  |||| |||||||| |||||    
T  35675209 atcgtcttaaccaatgccccaagg 35675186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 40436072 - 40436210
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||||| | |||||| ||||||  || | ||| |||  ||||| |    
T  40436072 caaaagtagcatgtttgctttggtttcaacaatattttgatatttaaaaagttaaatttattatttttcatcattttttaatgctattttttcattttta 40436171  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattc 195  Q
    ||| ||||||||||| | ||| |||||| ||||| ||||    
T  40436172 tccccttatccaatgtcccaaagacaatcgttagaattc 40436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 9693590 - 9693528
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatc 118  Q
    |||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9693590 tcaaaaatagcatgtttgcattggtttcaacaatatttcgacttttaaaaagttaaatttatc 9693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 31487743 - 31487851
Alignment:
Q  88 acattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggt 187  Q
    |||||||||  |||||||||| ||||||||||||||| || ||||| ||| | ||||||| |||||| |||| ||||| ||||||  ||||| |||||||    
T  31487743 acattttgatctttaaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatggt 31487842  T
Q  188 tagcattct 196  Q
    || ||||||    
T  31487843 taacattct 31487851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 35511264 - 35511184
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 171  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||    ||||||||||||||||| ||||| ||||||    
T  35511264 ttttaacttttaaaaagtcaaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 45088061 - 45088148
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatattt 147  Q
    ||||||||| || ||||||||| |||||||   ||||||||||| ||||| ||||||||||||||||||| |||||||||| | |||||||    
T  45088061 caaaagtagtatgtttgcattgatttcaac---attttgactttcaaaaaattaaatttatcacttttcatcattttccaatgctatattt 45088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 3769803 - 3769897
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttcta 150  Q
    |||||||||| |  |||||||||  || ||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||| |  |||||||||    
T  3769803 tcaaaagtagtaggtttgcattgaatttaacaatattttaacttttaaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 15986258 - 15986333
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| || |||||||||  |||||||| ||| ||||||||||||| ||||||| | ||||||||||||||||    
T  15986258 aaaagtagaatgtttgcattgaattcaacaatattctgacttttaaaaatttaaattcaccacttttcaccatttt 15986333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 20456559 - 20456670
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||  |||||||| ||||| || |||||||| ||||||| || |||||||| |||||| |||    | |||||||||||     
T  20456559 tcaaaagtagcatgtttgcattgaattcaacaatattttaacatttaaaaatttaaattcataacttttcatcatttttcaataaaacatttctattttt 20456658  T
Q  156 atccacttatcc 167  Q
    |||| |||||||    
T  20456659 atcctcttatcc 20456670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 46823488 - 46823543
Alignment:
Q  82 tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||  |||||||||||||||||||||||| || |||||||||||||||||||    
T  46823488 tcaacaattttttgacttttaaaaagttaaattcataacttttcaccattttccaa 46823543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 30617954 - 30618056
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaat 170  Q
    ||||||||| |||||||| ||||  ||||||||||||||||||| ||  ||||||| ||||| |||| |  |||||||||| || |||| |||| |||||    
T  30617954 ttgcattggattcaacaatatttgaacttttaaaaagttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaat 30618053  T
Q  171 gcc 173  Q
    |||    
T  30618054 gcc 30618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 46696026 - 46695940
Alignment:
Q  111 aatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||||||||||||||||||||| |||   ||||||| |||||| ||||||||||||||| || ||| | |||| |||| |||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaaaggcaatagttaacattctc 46695940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 13498218 - 13498110
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||  | || || |||||||||    ||||||||||||| |||  |||| |||||||     
T  13498218 cattggattcaacaaagttttgacttttaaaaagttaaattcatcgttctttactattttccaatacaatatttctatttttatcatcttaaccaatgca 13498119  T
Q  174 tcaaggaca 182  Q
    |||||||||    
T  13498118 tcaaggaca 13498110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 35927379 - 35927315
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||||||| | |||||||| ||||| ||||||||||||||||||| |||  ||||||||||||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaagttaaattcatcgtttttcaccattttc 35927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 36486780 - 36486724
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||| || ||||||||||||||||| |||||||  |||||||||||||||||||||    
T  36486780 ttcaataatattttgacttttaaaaaattaaattcttcacttttcaccattttccaa 36486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 51018496 - 51018400
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||| |||||| |||||  ||||||||  |||| | |||||||||||||||||  ||||||||||||||||| ||| |  || ||||||||||    
T  51018496 aaaagtagtatatttacattgaattcaacaatgttttaatttttaaaaagttaaattcttcacttttcaccatttttcaatgcaatgtttctatttt 51018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 9693454 - 9693361
Alignment:
Q  102 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    ||||| |||||||||||| |||||||| ||||| ||  |||||| | |||||| |||| ||||||||||||  ||| ||||||||||||| ||||    
T  9693454 aaaaatttaaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaaagacaatggttagcgttct 9693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 48513624 - 48513686
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    ||||||||  ||||||||  ||||||||||||||||||||||| | |||||||||| ||||||    
T  48513624 ttgcattgaattcaacaatgttttgacttttaaaaagttaaatctttcacttttcatcatttt 48513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 11996182 - 11996141
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  11996182 acttttagaaagttaaatctatcacttttcaccattttccaa 11996141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 1457640 - 1457556
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||||  |||||||| ||||| ||||||||||| |||||||||||| |||| |  | ||| ||| || |||||||||||||    
T  1457640 tttgcattgaattcaacaatattttaacttttaaaaaattaaatttatcaatttttattacttttcaatgtaatatttctatttt 1457556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 19328777 - 19328725
Alignment:
Q  145 tttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||| |||| |||||||||||||  ||| ||||||||||||||||||    
T  19328777 tttctatttttatccccttatccaatgccctaagaacaatggttagcattctc 19328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 29462809 - 29462908
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    |||||| |||||||||||||||||||| ||||| | |||||  ||| |||||| |||||| |||  | |||||| |||||| |||| ||||  |||||||    
T  29462809 cattggattcaacaacattttgactttgaaaaaataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaaacaatgcc 29462908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 31494779 - 31494704
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    ||||||||  |||||| |||||  ||||||||  ||||| | ||||||||||||||||  ||||||||||||||||    
T  31494779 caaaagtaatatatttacattgaattcaacaatgttttgtcatttaaaaagttaaattcttcacttttcaccattt 31494704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 20435874 - 20435828
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||| |||||||||||||||||  ||||||||||| |||||||||    
T  20435874 ttttgatttttaaaaagttaaattcttcacttttcacaattttccaa 20435828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 49483122 - 49483168
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||| ||||| ||||||| |||| |||||||||||||||||||||||    
T  49483122 ttttaactttgaaaaagtcaaatctatcacttttcaccattttccaa 49483168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 1801635 - 1801668
Alignment:
Q  99 tttaaaaagttaaatttatcacttttcaccattt 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  1801635 tttaaaaagttaaatttataacttttcaccattt 1801668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 32584613 - 32584560
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||||||| ||||| |||||||||||||| |||| || |||||| |||||||||    
T  32584613 ttcaacaatattttaacttttaaaaagttgaattcattactttttaccattttc 32584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 39158445 - 39158364
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||| || ||| |||||  || ||||| ||||| | ||||||||||||||||  ||||||||||||| ||| ||||    
T  39158445 tcaaaagtagtatgtttacattgaattgaacaatattttaatttttaaaaagttaaatagatcacttttcaccctttcccaa 39158364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 40593620 - 40593672
Alignment:
Q  84 aacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||    
T  40593620 aacaacattatgacttttaaaa-gttaaattcatcacttttcactatttcccaa 40593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 52895749 - 52895790
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||||||||||||||||| || ||||||||||| ||||    
T  52895749 ttttgacttttaaaaagttaaaattttcacttttcacaattt 52895790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 8715618 - 8715480
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |     
T  8715618 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta- 8715520  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||||||||||||  ||||||||||||||||||||||    
T  8715519 ccccttatccaatgccctaaggacaatggttagcattctc 8715480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 9067505 - 9067367
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |     
T  9067505 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta- 9067407  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || |||||||||||||  ||||||||||||||||||||||    
T  9067406 ccccttatccaatgccctaaggacaatggttagcattctc 9067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 46317477 - 46317615
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  46317477 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 46317576  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattc 195  Q
    || |||||||||||| ||||||| |||||||||||||||    
T  46317577 tctacttatccaatgtctcaagggcaatggttagcattc 46317615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 44570504 - 44570364
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  44570504 caaaagtagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaagttatcacttttcaccattttccaatgttatatttctattttga 44570405  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||| |||||| ||||| |||||||||||||||||    
T  44570404 tccctttatcgaatgccccaagggcaatggttagcattctc 44570364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 36730271 - 36730131
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||| |||||| |    
T  36730271 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttatattttta 36730172  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||  |||| |||||||||||||||||    
T  36730171 tccccttatccaatgccataagggcaatggttagcattctc 36730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 37509101 - 37509242
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | |  ||||| |||||     
T  37509101 tcaaaagtaacatatttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatgctgcatttcaattttt 37509200  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||| ||| | |||||||||||||||||    
T  37509201 atccccttatccaatgccccaaaggcaatggttagcattctc 37509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 4759968 - 4759828
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |    
T  4759968 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatgctatatttctattttta 4759869  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  |||||||||||  |||   |||||||||||||||||    
T  4759868 tccctttatccaatgctccaaatgcaatggttagcattctc 4759828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 32415560 - 32415700
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||||||| |    
T  32415560 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatgacttttcacaatttttcaatgctatatttctattttta 32415659  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  |||||||||||||||||| ||||| ||| |||||||    
T  32415660 tccctttatccaatgcctcaagggcaatgattaacattctc 32415700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 57 - 196
Target Start/End: Original strand, 35306323 - 35306462
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  35306323 caaaagtagcatgtttgcattgatttcaataacattttaacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctattttta 35306422  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    ||| ||||||||||  | ||||| |||||||||| |||||    
T  35306423 tccccttatccaattgcccaagggcaatggttagtattct 35306462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 29915693 - 29915553
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||||| |||||| |    
T  29915693 caaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttattttta 29915594  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||| ||| ||||| |||||||||||||||||    
T  29915593 tccccttatccaacgccccaagggcaatggttagcattctc 29915553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 29964846 - 29964706
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||||| |||||| |    
T  29964846 caaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttattttta 29964747  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||| ||| ||||| |||||||||||||||||    
T  29964746 tccccttatccaacgccccaagggcaatggttagcattctc 29964706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 44695789 - 44695649
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||  |||||||| |||||| |    
T  44695789 caaaagtaacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcatttttcaccattttccaagattatatttatattttta 44695690  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||| | ||| ||||||| |||||||||||    
T  44695689 tccccttatccaatgtcccaatgacaatgattagcattctc 44695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 10854850 - 10854992
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt-- 154  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| | |||||||||| |||      
T  10854850 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttattagttttcaccattttccaatgctatatttctactttta 10854949  T
Q  155 --catccacttatccaatgcctcaaggacaatggttagcattc 195  Q
      ||||| ||||||||||||| ||||| ||||| ||| |||||    
T  10854950 tccatccccttatccaatgccccaagggcaatgattaacattc 10854992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 51817430 - 51817294
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| |    
T  51817430 caaaagtagcatgtttgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttattttta 51817331  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||| ||||| |||||||  ||||| |||| ||||||||    
T  51817330 tcctcttattcaatgcccaaagga-aatgattagcatt 51817294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 12905399 - 12905292
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||| ||    
T  12905399 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaatgttaaatttatcatttttcaccatttt-caatgttatatttctatttttat 12905301  T
Q  158 ccacttatc 166  Q
    || ||||||    
T  12905300 ccccttatc 12905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 25102439 - 25102300
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||| |||||||||||| | |||||||||||||| |    
T  25102439 caaaagtagcatatttgcattggtttcaacaatattttaactttaaaaaaattaa-tttatcactttttaccattttccaatgctatatttctattttta 25102341  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||   |||||||||| | ||||| |||||||||||||||||    
T  25102340 tctcattatccaatgtcccaagggcaatggttagcattctc 25102300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 8847570 - 8847456
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||| ||||| ||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |    
T  8847570 caaaagtagcatgtttacattgttttcaacaatattttaacttttaaaaagttaaattaatcactttttaccattttccaatgttatatttctattttta 8847471  T
Q  157 tccacttatccaatg 171  Q
    ||| |||||||||||    
T  8847470 tccccttatccaatg 8847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 52570771 - 52570870
Alignment:
Q  57 caaaagtagcatat--ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  52570771 caaaagtagcatatgtttgcattggtttcaacaatattttgacttttaaaaagttatatttatcacttttcaccattttccaatactatatttctatttt 52570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 20227499 - 20227405
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttcta 150  Q
    ||||||||| ||| |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||| ||| | ||||||||||    
T  20227499 tcaaaagtaacatgtttgtattggtttcaataacattttaacttttaagaagttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 12051029 - 12051126
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||  ||||| |||   ||||||||||||||    
T  12051029 caaaagtagcatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcatttttcattattttacaatactatatttctatttt 12051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 31647295 - 31647364
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  31647295 caaaagtagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 1803919 - 1804019
Alignment:
Q  97 cttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    |||||| |||||||||||||||| |||| ||| |||| |||   |||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||    
T  1803919 cttttacaaagttaaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattct 1804018  T
Q  197 c 197  Q
    |    
T  1804019 c 1804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 45899662 - 45899540
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcac-ttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| || ||| |||||  |||||||| ||||||||||||||||| ||||||| ||||| |||||| ||||||||||  | |||||||||||||     
T  45899662 caaaagtagtatgtttacattgaattcaacaatattttgacttttaaaaatttaaattcatcactttttcatcattttccaatataatatttctattttt 45899563  T
Q  156 atccacttatccaatgcctcaag 178  Q
    || | ||||||||||||| ||||    
T  45899562 attctcttatccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 48136790 - 48136701
Alignment:
Q  107 gttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||||||||||||||| ||| ||||||||| | |||||||||||||| || | |||||||||| || |||||||||||||||||||||||    
T  48136790 gttaaatttatcacttt-cacaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctc 48136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 18888 - 18789
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    |||||| |||||||| ||||| | ||||||||||||||||| ||||||||||||| ||| |||| |  ||||||||||||| |||| |||| ||||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgcc 18789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 11316970 - 11317037
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| | ||||| || ||||||||||||||||||||||||| || |||||||||||||||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaagttaaattcataacttttcaccattttccaa 11317037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 34060871 - 34060808
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34060871 tttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcaccatttt 34060808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 41345979 - 41346042
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||    
T  41345979 tttgcattggtttcaacaatattttaacttttaaaaaattaaatttattacttttcactatttt 41346042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 19029 - 18949
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||| |||||||| ||||| | ||||||||||||||||| ||||||||||||| ||| |||| |  |||||||||||||    
T  19029 cattggattcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttt 18949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 41346349 - 41346405
Alignment:
Q  141 tatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||    
T  41346349 tatatttctatttttatccccttatccaatgccccaaggacaatggttaacattctc 41346405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 21324521 - 21324603
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||| || |||||||| ||||| |||||||||||||||||| |||||||||||| || ||||||| |  |||||||||||||    
T  21324521 ttgcatcggattcaacaatattttaacttttaaaaagttaaatctatcacttttcatca-tttccaatgcaatatttctatttt 21324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 49976232 - 49976185
Alignment:
Q  84 aacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 131  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  49976232 aacaatattttgacttttaaaaagttaaattcatcacttttcaccatt 49976185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 33641282 - 33641337
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctat 151  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||    
T  33641282 acttttaaaaagttgaatttatcatttttcaccaatttccaacataatatttctat 33641337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 34750362 - 34750295
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||| ||||| |||||||| ||||| | || |||||||||||||| |||||||||||||| |||||||    
T  34750362 tttgtattggattcaacaatattttaatttataaaaagttaaattcatcacttttcaccagtttccaa 34750295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 41998901 - 41998954
Alignment:
Q  85 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    |||||||||| ||||||| |||||| |||||| |||||||||||||||| ||||    
T  41998901 acaacatttttacttttataaagttgaatttaacacttttcaccatttttcaac 41998954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 39974906 - 39974847
Alignment:
Q  75 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    ||||| |||||||  ||||| ||||||||||||||||||| ||||||| ||| |||||||    
T  39974906 attggattcaacactattttaacttttaaaaagttaaattcatcacttctcatcattttc 39974847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 50420688 - 50420742
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcactttt 124  Q
    |||||||||  ||||||||  |||| |||||||||||||||||| ||||||||||    
T  50420688 tttgcattgaattcaacaattttttaacttttaaaaagttaaatctatcactttt 50420742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 9189255 - 9189308
Alignment:
Q  99 tttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 152  Q
    ||||||||||| |||| ||||||||| |||| |||||||| | |||||||||||    
T  9189255 tttaaaaagttgaattcatcactttttaccactttccaacataatatttctatt 9189308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 11675320 - 11675361
Alignment:
Q  73 gcattggtttcaacaacattttgacttttaaaaagttaaatt 114  Q
    ||||||| |||||||| |||||||| ||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaatt 11675361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 26850579 - 26850510
Alignment:
Q  90 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 159  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||||||| ||  | |||||| |||||| ||||    
T  26850579 attttaacttttaaaaaattaaattcatcactttttaccattttctaatataatatttatatttttatcc 26850510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 765255 - 765128
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||    
T  765255 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatccaa 765156  T
Q  170 tgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||| |||||||||||||||||    
T  765155 tgccccaagggcaatggttagcattctc 765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 2966532 - 2966671
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  2966532 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttatatttctatttttat 2966631  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    || ||||||||||| | | ||   ||||||||||||||||    
T  2966632 ccccttatccaatgtccccagataaatggttagcattctc 2966671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 39401652 - 39401513
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  39401652 caaaagtagcatgtttgtattggtttcaacaaaattttgacttttaaaaagttaaatt-atcacttttcaccatttttcaatgttatatttctattttta 39401554  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||||||||| ||||| |||||||||||||||||    
T  39401553 tccccttatccaatgccccaagggcaatggttagcattctc 39401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 17095184 - 17095045
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| |    
T  17095184 caaaaatagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt-tagagttatatttctattttta 17095086  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||  ||| ||||||||||||||||||    
T  17095085 tccctttatccaatgccctaagaacaatggttagcattctc 17095045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 27495113 - 27495254
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||||||| || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||||| ||||||     
T  27495113 tcaaaagtagtatgtttgcattggtttcaacaacattttgatttttaaaatgttaaatttatcacttttcaccattttctaatgttatatttttattttt 27495212  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||| ||||||| ||||  |||||||||||||||||    
T  27495213 atccccttattcaatgccccaagtgcaatggttagcattctc 27495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 56 - 194
Target Start/End: Complemental strand, 39085911 - 39085773
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||     
T  39085911 tcaaaagcagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttatcattttccaatgttatatttctattttt 39085812  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||||  |||||||||| | ||||  ||||||||||||||    
T  39085811 atccctttatccaatgtcccaagagcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 17056175 - 17056036
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||| |    
T  17056175 caaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttcttttttta 17056077  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||  |||| |||||||||||||||||    
T  17056076 tccctttatccaatgccctaagggcaatggttagcattctc 17056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 17068622 - 17068483
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||| |    
T  17068622 caaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttcttttttta 17068524  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||||||||||  |||| |||||||||||||||||    
T  17068523 tccctttatccaatgccctaagggcaatggttagcattctc 17068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 57 - 196
Target Start/End: Original strand, 862580 - 862719
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |    
T  862580 caaaagtagcatgtttgcattggtttcaacaagattttgactcttaaaaagttaaatttatcacttttcaccattttccaatactatatttctattttta 862679  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    |||  |||| |||||||  |||| |||| |||||||||||    
T  862680 tcccattattcaatgccctaagggcaattgttagcattct 862719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 1321165 - 1321299
Alignment:
Q  63 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 162  Q
    |||||| ||| ||||| ||||||||||||||||| ||||||| |||||||||||| | |||| |||||||||||| |||||||||||||||| |||| ||    
T  1321165 tagcatgtttacattgatttcaacaacattttgatttttaaagagttaaatttattattttttaccattttccaatgttatatttctatttttatcctct 1321264  T
Q  163 tatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||||||||  |||||||||||||||||||||||    
T  1321265 tatccaatgctccaaggacaatggttagcattctc 1321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 16361557 - 16361694
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||| |    
T  16361557 caaaagtaacatgtttgcattggtttcgacaacattttgacttttataaagttaaatttatcaatttttaccattttccaatgttatatttctattttta 16361656  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    | | ||||||||||||  ||||| |||| |||||||||    
T  16361657 ttcccttatccaatgctccaagggcaattgttagcatt 16361694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 33864349 - 33864486
Alignment:
Q  60 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 159  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |  |||||| |||||| ||||    
T  33864349 aagtaacatatttgcattggtttcaacaatattttgacttttaaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcc 33864448  T
Q  160 acttatccaatgcctcaaggacaatggttagcattctc 197  Q
     ||||| ||||| ||||||| ||||||||| |||||||    
T  33864449 tcttattcaatgtctcaagggcaatggttaacattctc 33864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 6999193 - 6999309
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||| |    
T  6999193 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatactatatttctattttta 6999292  T
Q  157 tccacttatccaatgcc 173  Q
    ||  |||||||| ||||    
T  6999293 tctccttatccattgcc 6999309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 17074605 - 17074466
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| |    
T  17074605 caaaaatagcatatttgcattagtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttctattttta 17074507  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||| ||||||  |||| |||||||||||||||||    
T  17074506 tccctttatctaatgccctaagggcaatggttagcattctc 17074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 41436468 - 41436609
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||   ||||||| ||||||     
T  41436468 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaagtttatcacttttcatcatttttcaatactatatttttattttt 41436567  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||| ||||  | |||| |||||||||| |||||||    
T  41436568 atccccttattcaatatcccaagaacaatggttaccattctc 41436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 35445410 - 35445275
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgactttt-aaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  35445410 tcaaaagtagcatgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttt 35445311  T
Q  155 catccacttatccaatgcctcaaggacaatggttag 190  Q
     |||| ||||| |||||||  ||||  |||||||||    
T  35445310 tatccccttattcaatgccctaagggtaatggttag 35445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 9201613 - 9201485
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||| |||||||     
T  9201613 tcaaaagtaacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaatttatcacttttcaccattttttaatattatattcctattttt 9201515  T
Q  156 atccacttatccaatgcctcaaggacaatg 185  Q
    |||   |||||||||| |||||||||||||    
T  9201514 atctcattatccaatgtctcaaggacaatg 9201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 44299782 - 44299659
Alignment:
Q  74 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 173  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | | |||||||||||||| |||| |||| ||||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaatttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgcc 44299683  T
Q  174 tcaaggacaatggttagcattctc 197  Q
     |||   ||||| |||||||||||    
T  44299682 ccaaaagcaatgattagcattctc 44299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 17603808 - 17603935
Alignment:
Q  63 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 162  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||| | |||||| ||| | |||||||||||||| |||   |    
T  17603808 tagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttttatcatttttcaatgctatatttctatttttatcgcgt 17603907  T
Q  163 tatccaatgcctcaaggacaatggttag 190  Q
    ||||||||||| ||||| ||||| ||||    
T  17603908 tatccaatgccccaagggcaatgattag 17603935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 17118490 - 17118377
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| || |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |||||||||   ||||||||||||||| |    
T  17118490 caaaaataacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaatttatcatttttcaacattttccagtattatatttctattttta 17118392  T
Q  157 tccacttatccaatg 171  Q
    |||  ||||||||||    
T  17118391 tccctttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 23685770 - 23685690
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23685770 caaaagtaacatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcacttttccccattttccaa 23685690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 13998016 - 13997882
Alignment:
Q  63 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 162  Q
    |||||| |||| |||| ||||||||| ||||| | |||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||| || | ||    
T  13998016 tagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttattccct 13997917  T
Q  163 tatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||| ||||||   |||||||||||||||||    
T  13997916 tatctaattcctcaaaagcaatggttagcattctc 13997882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 33726370 - 33726498
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||| |||||| |||| |||| ||||||||| ||||| ||||||| |||||||||||||| | ||||||||||||| |||   ||||||| ||||||     
T  33726370 tcaaaaatagcatgtttgtattgatttcaacaatattttaacttttagaaagttaaatttattatttttcaccatttttcaatactatatttttattttt 33726469  T
Q  156 atccacttatccaatgcctcaaggacaat 184  Q
    |||| ||||||||||||| ||||| ||||    
T  33726470 atccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 44173123 - 44173250
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 169  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||| ||| | |||||||||||||| |||   ||||| ||    
T  44173123 tttgtattggtttcaacaacattttaatttttaaaaaattaaatttatcatttttcatcatttttcaatgctatatttctatttttatcatattatcaaa 44173222  T
Q  170 tgcctcaaggacaatggttagcattctc 197  Q
    || | |||  ||||||||||||||||||    
T  44173223 tgtcccaaaaacaatggttagcattctc 44173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 15004917 - 15004987
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    ||||||||| ||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  15004917 tcaaaagtatcatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 43140419 - 43140309
Alignment:
Q  79 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaag 178  Q
    ||||||| || ||||| | |||||||||||||||||||||| |||||  |||||| ||| ||||||||| |||||| |||| ||||||||||  ||||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaatatctcaag 43140320  T
Q  179 gacaatggtta 189  Q
    |||||| ||||    
T  43140319 gacaatagtta 43140309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 464787 - 464927
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca-cttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||| ||| |||| |||| |||||| |||||||| ||||||||||||||||| ||||||  |||| |||||||| ||| |||||||||||||||| |    
T  464787 aaaagtaacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaattatcatttttttaccatttttcaatgttatatttctattttta 464886  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||  ||||| ||| |  ||| ||||||| ||| |||||||    
T  464887 tccctttatcaaatactccaaagacaatgattaacattctc 464927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 2239573 - 2239687
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| ||||||| ||||| |||||||| ||||| ||||||||||||||||||| |||| |||| |||||||| ||  |  |||||||||| || |    
T  2239573 caaaagtagtatatttgtattggattcaacaatattttaacttttaaaaagttaaattcatcattttttaccatttttcattgcaatatttctatcttta 2239672  T
Q  157 tccacttatccaatg 171  Q
    ||| |||| ||||||    
T  2239673 tcctcttaaccaatg 2239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 11445437 - 11445379
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaattt 115  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  11445437 caaaagtaacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 11445364 - 11445313
Alignment:
Q  102 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  11445364 aaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 34220740 - 34220650
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 171  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||||| || |||| |  | ||||||||||| |||| |||| ||||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 747585 - 747529
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||    
T  747585 ttcaacaattttttaacttttaaaaagttaaatctatcacttttcactattttccaa 747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 10900369 - 10900265
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||| ||| |||||| |||||  ||||| || ||||| ||||||||||| | ||||| ||||||||| | |||||| ||| || |||||||||||||     
T  10900369 tcaaaaatagtatatttacattgaattcaataatattttaacttttaaaaaataaaattcatcactttttatcatttttcaatgtgatatttctattttt 10900270  T
Q  156 atcca 160  Q
    |||||    
T  10900269 atcca 10900265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 34334278 - 34334167
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||| ||||| |||||||| ||||| | || ||||||||| ||||| ||| |||| ||||||||| ||    ||||||||||||| ||    
T  34334278 aaaagtagcatgtttgtattggattcaacaatattttaatttgtaaaaagtttaatttgtcattttttaccattttcaaatacaatatttctatttttat 34334179  T
Q  158 ccacttatccaa 169  Q
    |  |||||||||    
T  34334178 catcttatccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 3454819 - 3454714
Alignment:
Q  53 gtttcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 152  Q
    ||||||||||||| |  |||| ||||  |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||  ||  | |||||||||||    
T  3454819 gtttcaaaagtagtaattttgtattgaattcaacaatatttt-acttttaaaaagttaaagttatcactttttaccatcttttaatataatatttctatt 3454721  T
Q  153 ttcatcc 159  Q
    || ||||    
T  3454720 ttgatcc 3454714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 11659253 - 11659329
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||| || |||||| |||||  |||||||| ||||| | |||||||||||||||||  ||||||||||| |||||    
T  11659253 caaaagcagtatatttacattgaattcaacaatattttaatttttaaaaagttaaattcttcacttttcactatttt 11659329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 29260222 - 29260167
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca 136  Q
    ||||||||  |||| |||||| |||||| |||| ||||||||||||||||||||||    
T  29260222 ttcaacaattttttaactttttaaaagtcaaatctatcacttttcaccattttcca 29260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 34512671 - 34512714
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  34512671 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 34512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 2136451 - 2136529
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 159  Q
    |||||||| ||||| |||||| |||||| |||||   ||||||||| |||||||||| |  ||||||||||||| ||||    
T  2136451 ttcaacaatattttcacttttcaaaagtcaaattctccacttttcatcattttccaatgcaatatttctatttttatcc 2136529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 2958548 - 2958506
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||||||||||||||||| || ||||||||||| ||||||||    
T  2958548 acttttaaaaagttaaattcataacttttcaccactttccaac 2958506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 9965140 - 9965098
Alignment:
Q  90 attttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    ||||||||||||||||||||||||| || | ||||||||||||    
T  9965140 attttgacttttaaaaagttaaattcataatttttcaccattt 9965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 37230253 - 37230287
Alignment:
Q  99 tttaaaaagttaaatttatcacttttcaccatttt 133  Q
    ||||||||||||| |||||||||||||||||||||    
T  37230253 tttaaaaagttaagtttatcacttttcaccatttt 37230287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 2805373 - 2805441
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgactttt--aaaaagttaaatttatcactttt 124  Q
    |||||||| || |||| ||| | |||||||| ||||||||||||  ||||||||||||| |||||||||    
T  2805373 aaaagtagtatgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcactttt 2805441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 8327004 - 8327085
Alignment:
Q  90 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 171  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||  ||| |  |||||| |||||| |||| |||| ||||||    
T  8327004 attttaacttttaaaaagttaaatttttcacttttcattatttctcaaagcaatatttttatttttatcctcttaaccaatg 8327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 1e-49; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 10855423 - 10855562
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||     
T  10855423 tcaaaagtagcatatttgcat-ggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatattatatttctattttt 10855521  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  10855522 atccccttatcaaatgccccaaggacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 12191484 - 12191599
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||||||| |    
T  12191484 caaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttaccaatgctatatttctattttta 12191583  T
Q  157 tccacttatccaatgc 172  Q
    ||||||||||||||||    
T  12191584 tccacttatccaatgc 12191599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 5578264 - 5578405
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| || |||  ||||| ||| | ||||||||||||||     
T  5578264 tcaaaagtagcatgtttgcatttgtttcaacaatattttgacttttaaaaagttaaatttatcaattctcattatttttcaatgctatatttctattttt 5578363  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| || |||||||||||||||| |||| |||| |||||||    
T  5578364 atcccctcatccaatgcctcaagggcaatagttatcattctc 5578405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 26572196 - 26572060
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||||||||||  ||||||||||||||||| | ||||||||     ||||||||||||||     
T  26572196 tcaaaagtagcatgtttgcattggttttaacaatattttaacttttaaaatattaaatttatcactttttatcattttcc-----tatatttctattttt 26572102  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  26572101 atccccttatccaatgccccaaggacaatggttagcattctc 26572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 16437696 - 16437568
Alignment:
Q  61 agtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcca 160  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||| |||||    
T  16437696 agtagcatgtttgcattggtttcaacaatatttttacttttaaaaagttaaattt--------tcaccattttccaatgttatatttctatttttatcca 16437605  T
Q  161 cttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||||||| |||  |||||||||||||||||    
T  16437604 cttatccaatgccttaagagcaatggttagcattctc 16437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 6866913 - 6867022
Alignment:
Q  64 agcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactt 163  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||| |||||| |||| |||    
T  6866913 agcatgtttgcattgatttcaacaacattttgacttttaaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatcccctt 6867012  T
Q  164 atccaatgcc 173  Q
    ||||||||||    
T  6867013 atccaatgcc 6867022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 7875299 - 7875202
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  7875299 caaaagtagcatgtctgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttctatttt 7875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 7274332 - 7274192
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||| || |    
T  7274332 caaaagtaacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaatttatcacttttcgtcattttccaatgttatatttctatattta 7274233  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | | ||| ||||||| | ||| ||||||||||| |||||||    
T  7274232 ttcccttgtccaatgtcccaaagacaatggttaacattctc 7274192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 29692427 - 29692319
Alignment:
Q  89 cattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggtt 188  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||   |||||||||||||| ||||| |||||||||||| ||||| ||||| ||    
T  29692427 cattttgactcttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgatt 29692328  T
Q  189 agcattctc 197  Q
    |||||||||    
T  29692327 agcattctc 29692319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 7880545 - 7880448
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||||||| | || ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||||    
T  7880545 caaaagtagcatgtctgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttctaatgctatatttctatttt 7880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 32786259 - 32786346
Alignment:
Q  109 taaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||| || ||||| |||||||||||||||||    
T  32786259 taaatttatctcttttcaccattttccaatgttatatttctatttttatcc-cttatccaataccccaagggcaatggttagcattctc 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 8324204 - 8324085
Alignment:
Q  75 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 174  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||  ||| | ||| |||||||||| |||  ||||| |||||||     
T  8324204 attggtttcaacaacattttaatttttaaaaagttaaatttatcatttttcacaatttctcaatgctatgtttctatttttatcttcttattcaatgccc 8324105  T
Q  175 caaggacaatggttagcatt 194  Q
    |||| | |||||||||||||    
T  8324104 caagaataatggttagcatt 8324085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 31220445 - 31220320
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||||||| || ||||||||   ||||| |||||||| ||||||||||||||||||| ||||||||| |||||||| |||    ||||||| |||| ||    
T  31220445 caaaagtagtatgtttgcattttattcaataacattttaacttttaaaaagttaaattcatcactttttaccatttttcaaaacgatatttccatttcca 31220346  T
Q  157 tccacttatccaatgcctcaaggaca 182  Q
    ||| ||||||||||||| ||| ||||    
T  31220345 tcctcttatccaatgccccaaagaca 31220320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 32786060 - 32786110
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32786060 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaag 32786110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 21186136 - 21186059
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    ||||||||||||  |||||||| | ||||| || ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  21186136 tcaaaagtagcaattttgcattagattcaataatattttaacttttaaaaagttaaattcatcactttttaccatttt 21186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 12175552 - 12175685
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    |||||||| || ||||||||||||| || ||| |||| |||||||||||||||||||||||| |||| | |||||| |||   ||||||| |||||| ||    
T  12175552 aaaagtagtatgtttgcattggttttaataac-ttttaacttttaaaaagttaaatttatcagtttttatcatttttcaatactatatttatatttttat 12175650  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||     |||||| |||||||  ||||| |||||||||||    
T  12175651 cc-----tccaatacctcaagagcaatgattagcattctc 12175685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 34780097 - 34780023
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccat 130  Q
    |||||||||| |||||| |||||  ||||||||  |||| |||||||||||||||||||  ||||||||||||||    
T  34780097 tcaaaagtagtatatttacattgaattcaacaatgttttaacttttaaaaagttaaattcttcacttttcaccat 34780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 27127601 - 27127550
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||| || |||||||||||||||||||||| |||| ||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaattcatcatttttcaccattt 27127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 28014639 - 28014706
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||| | |||| |||||||||||| ||||    
T  28014639 tttgcattggattcaacaatattttaacttttaaaaagtcaaactcatcatttttcaccatttcccaa 28014706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 6507508 - 6507438
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    |||||||||| |||| | |||||  ||||||||  |||||| |||||||||||||||||| ||||||||||    
T  6507508 tcaaaagtagtatatatacattgaattcaacaatgttttgatttttaaaaagttaaatttttcacttttca 6507438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 1947424 - 1947477
Alignment:
Q  85 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||| |||||||||||| |||||| |||||| ||||||| |||||||||||||    
T  1947424 acaactttttgacttttagaaagttgaatttaacactttttaccattttccaac 1947477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 14232610 - 14232533
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||||| || ||| |||| | ||| ||||  ||||||||||| ||||| |||||| ||||||||||||||||||    
T  14232610 tcaaaagtagtatgtttacattagattcgacaatgttttgacttttgaaaagctaaattcatcacttttcaccatttt 14232533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 19646024 - 19646069
Alignment:
Q  93 ttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||    
T  19646024 ttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 19646069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 29964302 - 29964367
Alignment:
Q  67 atatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||| |||||  ||||||||  ||||||||||||||||||||||||  | | ||||||||||||    
T  29964302 atatttacattgaattcaacaatgttttgacttttaaaaagttaaattatttatttttcaccattt 29964367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 1e-49; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 5151480 - 5151620
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  5151480 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 5151579  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||| |||||||||| |||||||||||||| ||||    
T  5151580 tccccttatcaaatgcctcaatgacaatggttagcactctc 5151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 35653373 - 35653236
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  35653373 caaaagtaccatgtttgcattggtttcaacaacattttgattttcaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta 35653274  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||| ||||||||||||  ||||| ||||||||||||||    
T  35653273 tccccttatccaatgcaccaagggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 4422083 - 4421942
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||| |||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||||||||     
T  4422083 tcaaaagtaacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttt 4421984  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| |||||||||||||  |||| ||||||||| |||||||    
T  4421983 atcctcttatccaatgccctaagggcaatggttaacattctc 4421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 4962634 - 4962495
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  4962634 caaaagtagcatgtttgtattagtttcaacaacattttgactttaaaaaagttaaatttatcacttttcatcattttccaatgttatatttctattttta 4962535  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | | ||||||||||| | ||||| |||||| ||||||||||    
T  4962534 ttc-cttatccaatgtcccaagggcaatgggtagcattctc 4962495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 34546769 - 34546909
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||| ||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  34546769 caaaagtatcatttttgcattagtttcaacaacattttaacttttaaaaaattaaatttatcacttttcaccatttttcaatgttatatttctattttta 34546868  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||| |  ||||||||||| ||| |||||||    
T  34546869 tccccttatccaatactccaaggacaatgattatcattctc 34546909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 25017410 - 25017287
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||     
T  25017410 tcaaaagtagcatgtttgtattggtttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttt 25017311  T
Q  156 atccacttatccaatgcctcaagg 179  Q
    |||| |||||||||||||||||||    
T  25017310 atccccttatccaatgcctcaagg 25017287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 56 - 194
Target Start/End: Complemental strand, 3639193 - 3639056
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    |||||||||  || ||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||     
T  3639193 tcaaaagtaatatgtttgcattggtttcaacaatattt-gacttttaaaaaattaaatttatcactcttcaccattttccaatgttatatttctattttt 3639095  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    |||| ||||| ||||| |||||| |||||||||||||||    
T  3639094 atccccttattcaatgtctcaagaacaatggttagcatt 3639056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 16315650 - 16315512
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| | |||||||||||||| |    
T  16315650 caaaagtagcgtgtttgcattggtttcaacaacattttgactattaaaaagtta--tttatcacttttcaccattttccaatgctatatttctattttta 16315553  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| ||||||| |||||  |||| || ||||||||||||||    
T  16315552 tccccttatccgatgcccaaagggcagtggttagcattctc 16315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 39567893 - 39568034
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||     
T  39567893 tcaaaagtagcatgtttgcattggtttcaacaatgttttgatttttaaaaagttaaatttatcatttttcatcattttccaatgctatatttatattttt 39567992  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||||  |||||||||||| ||||| ||||||||| |||||||    
T  39567993 atcccattatccaatgccccaagggcaatggttatcattctc 39568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 28143241 - 28143101
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||| |||| |||||||||||||||| |    
T  28143241 caaaagtagcatgtttgtattagtttcaacaacattttgatttttaaaaagttaaatttattatttttcaccatttcccaatgttatatttctattttta 28143142  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||  ||||| ||||| | ||||| |||||||||||||||||    
T  28143141 tctccttattcaatgtcccaagggcaatggttagcattctc 28143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 35945237 - 35945377
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| || |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |    
T  35945237 caaaaatatcatatttgcattagtttcaacaacattttaacatttaaaaagttaaatttatcacttttcactattttccaatgttatatttctattttta 35945336  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    | | |||||||||| || ||||  ||||| |||||||||||    
T  35945337 ttcccttatccaataccccaagagcaatgattagcattctc 35945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 1479236 - 1479114
Alignment:
Q  75 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 174  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||| |||| ||||| ||||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcct 1479137  T
Q  175 caaggacaatggttagcattctc 197  Q
    |||| | ||||||||||||||||    
T  1479136 caagaataatggttagcattctc 1479114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 37243852 - 37243977
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaat 170  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||  |||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcc-tttatccaat 37243950  T
Q  171 gcctcaaggacaatggttagcattctc 197  Q
    ||||||||| ||||| |||||||||||    
T  37243951 gcctcaagggcaatgattagcattctc 37243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 43414183 - 43414042
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 155  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||     
T  43414183 tcaaaagtaacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattgatcatttttcaccattttccaatgctatatttctattttt 43414084  T
Q  156 atccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||| |||||||  || | ||||| ||||  |||||||||||    
T  43414083 atccccttatcccttgtcccaagggcaattcttagcattctc 43414042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 1759820 - 1759929
Alignment:
Q  69 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatcca 168  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||   |||||||||||||| |||| ||||||||    
T  1759820 atttgcattggttttaacaacattttgacttttaaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatcca 1759919  T
Q  169 atgcctcaag 178  Q
    ||||| ||||    
T  1759920 atgccccaag 1759929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 338881 - 338742
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| | |||||| |||  | |||||| |||||| ||    
T  338881 aaaagtagcatgtttgcatttgtttcaacaatattttgatttttaaaaagttaaatttatcactttttatcatttttcaatatcatatttttatttttat 338782  T
Q  158 ccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||  |||||||||||| ||||| |||||||||| ||||||    
T  338781 ccctttatccaatgccccaagggcaatggttaggattctc 338742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 13951354 - 13951258
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 153  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| | |||||||||||||    
T  13951354 caaaagtagcatgcttgcattggtttcaacaacattttgacttttaaaaaaataaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 8410133 - 8410273
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| |||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||| ||   ||||||| |||||| |    
T  8410133 caaaactagcatgtttgtattggttttaataacattttgacttttaaaaagttaaatttatcattttttaccattttctaatactatatttttattttta 8410232  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||| ||| || ||| | |||||||||||||||||    
T  8410233 tccccttatctaataccccaaaggcaatggttagcattctc 8410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 12068286 - 12068195
Alignment:
Q  63 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  12068286 tagcatgtttgtattggtgtcaataacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttt 12068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 12914166 - 12914261
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 152  Q
    ||||||||| || ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||    
T  12914166 caaaagtagtatgtttgcattggtttcaacaatattttgatttttaaaaaattaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  86 caacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgc 172  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||| ||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 10017733 - 10017600
Alignment:
Q  61 agtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcca 160  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||||||||  ||||||| |||||||||||| |||    |||||||||||||| ||||     
T  10017733 agtagtatgtttgcattggttttaacaacattttaacttttaaaaagtta--tttatcaattttcaccattt-ccagtactatatttctatttttatcct 10017637  T
Q  161 cttatccaatgcctcaaggacaatggttagcattctc 197  Q
    |||||| |||| ||| ||||||||||||| |||||||    
T  10017636 cttatcaaatgtctctaggacaatggttaacattctc 10017600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 15915871 - 15915960
Alignment:
Q  105 aagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcatt 194  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| || | ||||||||||||| ||||  ||||||||||||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 25568397 - 25568288
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccac-ttatcca 168  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| |||||| ||| | ||||||| |||||| |||| | |||||||    
T  25568397 tttgcattggtttcaataacattttgatttttaaaaagttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccctttatcca 25568298  T
Q  169 atgcctcaag 178  Q
    || |||||||    
T  25568297 atacctcaag 25568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 40099333 - 40099461
Alignment:
Q  64 agcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacca-ttttccaacgttatatttctattttcatccact 162  Q
    ||||||||||||||| ||||||||   |||  | |||||||| ||||||||||||||||||||||| |||| ||| | ||||||| ||||||  ||| ||    
T  40099333 agcatatttgcattgatttcaaca---tttcaatttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt--tcccct 40099427  T
Q  163 tatccaatgcctcaaggacaatggttagcattct 196  Q
    ||||||||||| ||||||||||||||| ||||||    
T  40099428 tatccaatgccacaaggacaatggttaacattct 40099461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 39335477 - 39335540
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  39335477 tttgtattggattcaacaacattttgacttttaaaaagttaaattcatcactttttactatttt 39335540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 10406779 - 10406854
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||| ||| |||||||||| |||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||    
T  10406779 caaaagtaacatttttgcattggattcaacaatattttgaatttaaaaaa-ttaaatttatcacttttctccatttt 10406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 39069370 - 39069314
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||| |||||||||    
T  39069370 ttcaacaatattttgacttttaaaatgttaaattcatcacttttcacaattttccaa 39069314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 39693000 - 39693090
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatt 146  Q
    ||||||||| ||| |||| |||| ||||||||| ||||| |||||||||||| ||||||||||| |||| |||| ||| ||| | ||||||    
T  39693000 tcaaaagtaacatgtttgtattgatttcaacaatattttaacttttaaaaagataaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 6823859 - 6823770
Alignment:
Q  69 atttgcattggtttcaacaacattttgacttttaaaaagtt-aaatttatcacttttcaccattttccaacgttatatttctattttcat 157  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||| |||| |||||| |    ||||||||||||||||    
T  6823859 atttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctattttcat 6823770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 16899677 - 16899635
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaa 112  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  16899677 tttgtattggattcaacaacattttgacttttaaaaagttaaa 16899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 159
Target Start/End: Complemental strand, 39042153 - 39042051
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    ||||| |||||| ||| |||||   ||||||||||||| ||||||||||| ||||||| | || ||||||  ||||| ||| ||||||||| |||||| |    
T  39042153 caaaaatagcatgtttacattgacatcaacaacattttaacttttaaaaaattaaattaaccatttttcattattttacaatgttatatttttattttta 39042054  T
Q  157 tcc 159  Q
    |||    
T  39042053 tcc 39042051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 3015144 - 3015071
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    |||||||| ||||| ||||||||||||||||||| |||| ||| ||| |||||| |||   |||||||||||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaattaatcattttacactattttctaacacaatatttctatttt 3015071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 678465 - 678521
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||  |||| |||||||||| |||||||| || |||||||||||||||||||    
T  678465 ttcaacaattttttaacttttaaaaggttaaattcattacttttcaccattttccaa 678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 10163720 - 10163668
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||| ||| |||||||||||||||||||||||||  |||||||||||| ||||    
T  10163720 ttcagcaatattttgacttttaaaaagttaaattcttcacttttcaccctttt 10163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 24288517 - 24288553
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24288517 acttttaaaaagttaaatctatcacttttcaccattt 24288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 24373704 - 24373668
Alignment:
Q  96 acttttaaaaagttaaatttatcacttttcaccattt 132  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24373704 acttttaaaaagttaaatctatcacttttcaccattt 24373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 27535114 - 27535206
Alignment:
Q  86 caacattttgacttttaaaaagttaaattt-atcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaa 177  Q
    ||||||||| ||||||||||| ||||| || |||||||||||||||||| |||    |||||| |||||| ||||  |||| |||||||||||    
T  27535114 caacattttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttattcaatgcctcaa 27535206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 39167587 - 39167666
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||  |||||| |||||  || |||||  |||||| |||||||||||||||||| | |||||||||||||||||||    
T  39167587 caaaagtaatatatttacattgaatttaacaatgttttgatttttaaaaagttaaattt-ttacttttcaccattttccaa 39167666  T

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Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 5058777 - 5058812
Alignment:
Q  98 ttttaaaaagttaaatttatcacttttcaccatttt 133  Q
    |||||||||||||||||||||||||||||| |||||    
T  5058777 ttttaaaaagttaaatttatcacttttcacaatttt 5058812  T

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Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 12349628 - 12349585
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttc 134  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  12349628 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 12349585  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 28599759 - 28599692
Alignment:
Q  70 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    |||||||||  ||||| ||  |||| ||||||||||||| |||||||||| ||||||| |||||||||    
T  28599759 tttgcattgaattcaataaatttttaacttttaaaaagtcaaatttatcatttttcactattttccaa 28599692  T

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Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 4838272 - 4838322
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag 107  Q
    ||||| || ||| |||||||| |||||||||| ||||||||||||||||||    
T  4838272 caaaaataacatgtttgcattagtttcaacaatattttgacttttaaaaag 4838322  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 38610386 - 38610313
Alignment:
Q  81 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 154  Q
    ||||||||  ||||||||||||||||||||||||  |||||||| | |||||| ||| |  || ||||||||||    
T  38610386 ttcaacaatgttttgacttttaaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttt 38610313  T

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Target: scaffold0062 (Bit Score: 81; Significance: 1e-37; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 16889 - 16750
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  16889 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 16791  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  16790 tccccttatccaatgccctatgggcaatggttagcattctc 16750  T

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Target: scaffold0062; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 27057 - 26918
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  27057 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 26959  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  26958 tccccttatccaatgccctatgggcaatggttagcattctc 26918  T

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Target: scaffold0062; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 37223 - 37084
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 156  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  37223 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 37125  T
Q  157 tccacttatccaatgcctcaaggacaatggttagcattctc 197  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  37124 tccccttatccaatgccctatgggcaatggttagcattctc 37084  T

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Target: scaffold0002 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 392249 - 392114
Alignment:
Q  58 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacg----ttatatttctattt 153  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |     |||||||||| ||    
T  392249 aaaagtagcatgtttgcatcggtttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttcaatgctatatatatttctaatt 392150  T
Q  154 tcatccacttatccaatgcctcaaggacaatggtta 189  Q
    | ||||  ||||| ||| |||||||| |||||||||    
T  392149 ttatccctttatctaattcctcaagggcaatggtta 392114  T

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Target: scaffold0809 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 4765 - 4705
Alignment:
Q  56 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaattta 116  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||    
T  4765 tcaaaagtagcatgtttgcattaatttcaacaacatattgacttttaaaaagttaaattta 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 4337 - 4249
Alignment:
Q  108 ttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcaaggacaatggttagcattct 196  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||||| ||||   ||||||||| | |||   ||||| ||||||||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaaaagcaatgattagcattct 4249  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 37483 - 37428
Alignment:
Q  71 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 126  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  37483 ttgcattggattcaataacattttgacttttgaaaagttaaattcatcatttttca 37428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 39580 - 39658
Alignment:
Q  57 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 137  Q
    ||||||||| |||||| |||||  ||||||||  | ||||||||||||||||||||||  ||| ||||||| |||||||||    
T  39580 caaaagtagtatatttacattgaattcaacaa--tgttgacttttaaaaagttaaattcttcagttttcactattttccaa 39658  T

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Target: scaffold0169 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 9092 - 9045
Alignment:
Q  91 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaac 138  Q
    ||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  9092 ttttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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