View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5800-Insertion-8 (Length: 197)
Name: NF5800-Insertion-8
Description: NF5800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5800-Insertion-8 |
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Alignment Details
Target: chr2 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 32984521 - 32984322
Alignment:
| Q |
9 |
gtatagtgtcattttcatccaatttcttacttacatcatcagtctattctcttatttgaaataaaaaatatatatcatcattctactctc---------- |
98 |
Q |
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| T |
32984521 |
gtatagtgtcattttcatccaatttcttacttacatcatcagtctattctcttatttgaaataaaaaatatatatcatcattctactctctaagcataag |
32984422 |
T |
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| Q |
99 |
--taagtacagnnnnnnnncttccacaaattaccaataaaaagaaatttttgttgkgtttatgcaaatcacatcaaattttttaaaatgttatgaaagaa |
196 |
Q |
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| T |
32984421 |
agtaagtacagttttttttcttccataaattaccattaaaaagaaatttgtgttgtgtttatgcaaatcacatcaaaatttctaaaatgttatgaaagaa |
32984322 |
T |
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