View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5801-Insertion-4 (Length: 276)
Name: NF5801-Insertion-4
Description: NF5801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5801-Insertion-4 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 44167205 - 44166938
Alignment:
| Q |
9 |
accttaaggttgcacactaaatggcgcccatctggacattacacaataccctattcatgttcaaatactttgttcttgccacaaccaaatttcaatctcc |
108 |
Q |
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| T |
44167205 |
accttaaggttgcacactaaatggcgcccatctggacattacacaataccctattcatgttcaaatactttgttcttgccacaaccaaatttcaatctcc |
44167106 |
T |
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| Q |
109 |
ctcttgtttcaccattaatgccattcatttccatcaaaatataatactatctacaatatccattggaacctacaacaaagctagttctcttgcacaccac |
208 |
Q |
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| T |
44167105 |
ctcttgtttcaccattaatgccattcatttccatcaaaatataatactatctacaatatccattggaacctacaacaaagctagttctcttgcacaccac |
44167006 |
T |
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| Q |
209 |
aagcaaaaccaacaaacactcccactgtctgcactcaagcataagcctcattcaagaagaccttgtag |
276 |
Q |
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| T |
44167005 |
aagcaaaaccaacaaacactcccactgtctgcactcaagcataagcctcattcaagaagaccttgtag |
44166938 |
T |
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