View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5803-Insertion-5 (Length: 371)
Name: NF5803-Insertion-5
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5803-Insertion-5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 11 - 371
Target Start/End: Original strand, 32213117 - 32213470
Alignment:
| Q |
11 |
taatatcttataataagaagaaggagagagacatgaaggaagtgtggaaacaaagaagcttaaggtcaagttttattggggaagcaaaaatatgcacaaa |
110 |
Q |
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| T |
32213117 |
taatatcttataataagaagaaggagagagacatgaaggaagtgtggaaacaaagaaacttaaggtcaagttttattggggaagcaaaaatatgcacaaa |
32213216 |
T |
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| Q |
111 |
gctcaatgaagtttagaaagaatattattaagaatagaatatgtgattaagagtttgtcatgtgatgtgtaccacccaccaaacacaagacaaaacttaa |
210 |
Q |
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| T |
32213217 |
gctcaatgaagtttagaaagaatattattaagaatagaatatgtgattaagagtttgtcatgtgatgt------accaccaaacacaagacaaaacttaa |
32213310 |
T |
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| Q |
211 |
ttaattaacttaatgaaggaattggatcatctacaaatgtagaccgttagatttnnnnnnntaaattttctctaaattcaactgtttctatgattccagc |
310 |
Q |
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| T |
32213311 |
ttaattaacttaatgaaggaattgaatcatctataaatgtagacagttaaatttaaaaagat-aattttctctaaattcaactgtttctacgattgcaac |
32213409 |
T |
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| Q |
311 |
actatacataatacaatcgtagagaatccaagctgcaataccgtagtccgatcgtagaaga |
371 |
Q |
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|||||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||| |
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| T |
32213410 |
actatacatactgcaatcgtagagaatccaagctgcaataccgtagttcaatcgtagaaga |
32213470 |
T |
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